Xref: utzoo bionet.general:468 bionet.molbio.gene-org:5
Path: utzoo!attcan!utgpu!watmath!uunet!murtoa.cs.mu.oz.au!munnari.oz.au!bruce!lloyd
From: lloyd@bruce.OZ (lloyd allison)
Newsgroups: aus.mbio,bionet.general,bionet.molbio.gene-org
Subject: families if DNA or RNA wanted
Keywords: alignment, homology
Message-ID: <1411@bruce.OZ>
Date: 28 Jul 89 00:22:16 GMT
Organization: Monash Uni. Computer Science, Australia
Lines: 20

aaa

I am working on alignment algorithms
and need a large number of sets of DNA, RNA or protein strings
where: The members of a set are known or presumed to be related,
       each set has 2 or more members.

Particularly valuable are sets that are difficult to align
ie. a lot of juggling of weights is needed to get a biologically
plausible alignment.
I need to know the accepted alignment too.

If you have or know of such a set, please email details, eg:
   reference to literature,
   data base and string identifiers,
   start points, end points
   treatment of ends, weights
   alignment

zzz