Path: utzoo!attcan!uunet!samsung!zaphod.mps.ohio-state.edu!sol.ctr.columbia.edu!cica!iuvax!bionet!life!mia From: mia@life (Mia McLeod) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003191641.AA28448@life.LANL.GOV> Date: 19 Mar 90 16:41:25 GMT Sender: daemon@genbank.BIO.NET Lines: 125 Approved: lear@genbank.bio.net LOCUS ECOMALQP 2866 bp ds-DNA BCT 13-MAR-1990 DEFINITION E.coli amylomaltase (malQ) gene, complete cds, maltodextrin phosphorylase (malP) gene, 3' end. ACCESSION M32793 KEYWORDS amylomaltase; malP gene; malQ gene; maltodextrin phosphorylase. SOURCE E.coli K12 DNA, clone pOM13. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 2866) AUTHORS Pugsley,A.P. and Dubreuil,C. TITLE Molecular characterization of malQ, the structural gene for the Escherichia coli enzyme amylomaltase JOURNAL Mol. Microbiol. 2, 473-479 (1988) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by A.P.Pugsley, 15-DEC-1988. FEATURES from to/span description pept < 1 494 maltodextrin phosphorylase (malP; AA at 3) pept 504 2588 amylomaltase (malQ) signal 2623 2667 pot. transcription termination signal BASE COUNT 699 a 702 c 862 g 603 t ORIGIN 5 bp upstream of PstI site. 1 ctgcaggtaa agaagcttcc ggtaccggca atatgaaact ggcgctcaat ggtgcgctta 61 ctgtcggtac gctggatggg gcgaacgttg aaatcgccga gaaagtcggt gaagaaaata 121 tctttatttt tggtcatacc gtggaacaag tgaaggcaat tctggccaaa ggctacgacc 181 cggtgaaatg gcggaagaaa gataaggtgc tggacgcagt attgaaagag ctggaaagcg 241 gtaaatacag cgacggcgat aagcatgcct tcgaccagat gctgcacagt atcggcaaac 301 agggcggcga tccgtatctg gtgatggcgg atttcgcagc ctatgtagag gcacaaaagc 361 aggtggatgt gctgtaccgc gaccaggagg cctggactcg cgcggcgatc ctcaataccg 421 cccgctgcgg tatgtttagc tcggatcgct ctattcgcga ttatcaggct cgtatctggc 481 aggcaaaacg ctaaggaagc tcgatggaaa gcaaacgtct ggataatgcc gcgctggcgg 541 cggggattag ccccaattac atcaatcccc acggtaaacc gcagtcgatt agcgccgaaa 601 ccaaacggcg tttgcttgac gcgatgcatc aacgtaccgc cacgaaagtg gcggtaacgc 661 cagtcccgaa tgtcatggtt tataccagcg gcaaaaaaat gccgatggtg gtggagggca 721 gcggcgaata tagctggctg ctgaccaccg aagaaggaac gcagtacaaa ggccatgtaa 781 cggggggcaa agcgttcaat ctaccgacca agctgccgga aggttatcac acgctgacac 841 tcacccagga cgaccagcgc gcgcattgcc gggtgattgt cgccccgaaa cgctgttacg 901 aaccgcaggc gttgctgaat aaacaaaagc tgtggggtgc ctgcgttcag ctttatacgc 961 tgcgatcgga aaaaaactgg ggtattgggg attttggcga tctcaaagcg atgctggtgg 1021 atgtggcaaa acgtggcggg tcgttcattg gcctgaaccc gattcatgcg ctctatccgg 1081 caaatccgga gagcgccacc gcatacagcc cgtcttctcg ccgttggctg aatgtgattt 1141 atatcgacgt taacgccgtt gaagatttcc atcttagcga agaggctcag gcctggtggc 1201 agttgccgac cacgcaacag acgctgcaac aggcgcgcga tgccgactgg gtcgattact 1261 ccacggttac cgccctaaaa atgacagcat tacgaatggc gtggaaaggt ttcgcgcaac 1321 gtgatgatga gcagatggcc gcgtttcgcc agtttgttgc agagcagggc gacagcctgt 1381 tctggcaggc agcctttgat gcgctacatg cccagcaagt gaaagaggac gaaatgcgct 1441 ggggctggcc tgcatggcca gagatgtatc agaacgtgga ttcaccagaa gtgcgtcagt 1501 tctgcgaaga acatcgtgat gacgtcgatt tttatctctg gttgcagtgg ctggcttaca 1561 gccagtttgc cgcctgctgg gagataagcc agggctatga aatgccgatt ggcttgtatc 1621 gtgatctggc ggttggcgta gggacaggtg gggcggaaac ctggtgtgac cgtgaactat 1681 attgcctgaa agcatcggtt ggcgcgccgc cggatatcct cggcccgttg gggcagaact 1741 ggggattacc gccaatggac ccgcatatca tcaccgcgcg tgcctatgaa ccgtttatcg 1801 agctgttgcg tgccaatatg caaaactgcg gcgcattacg aattgaccat gtgatgtcga 1861 tgctgcgttt gtggtggata ccgtatcgcg agacggcaga tcagggcgcg tatgttcact 1921 atccggtgga tgatctgctc tcgattctgg cactcgaaag taaacgtcat cgctgtatgg 1981 tgattggtga agatctcggt accgtaccgg tagagattgt cggtaagctg cgcagcagcg 2041 gtgtgtactc ttacaaagtg ctctatttcg aaaacgacca cgagaagacg ttccgtgcac 2101 cgaaagcgta tccggagcag tcgatggcgg ttgcggcgac acatgacctg ccaacgctgc 2161 gcggttactg ggagtgcggg gatctaacgc tgggcaaaac cctggggctg tatccggatg 2221 aagtggtact gcgcggtctg tatcaggatc gcgaactggc gaagcaaggg ctgctggatg 2281 cactgcataa atatggttgt ctgccgaaac gtgccgggca taaggcatcg ttgatgtcga 2341 tgacgccgac gctgaaccgt ggtttgcagc gctacattgc cgacagtaac agtgctctgt 2401 taggactaca gccggaagac tggctggata tggccgaacc ggtgaatatt cctggcacca 2461 gttaccagta taaaaactgg cgacgcaagc tttccgcaac gcttgagtcg atgtttgccg 2521 atgatggcgt gaacaagttg ctgaaggatt tggacagacg gcgcagagct gcagcgaaga 2581 agaagtagag tgcggttgat gccggatgcg atgcttgacg cgtcttatcc ggcctactaa 2641 ttcatcccga atcgtaggcc ggataaggcg gtcaccgatc cgagtcagtg ttatcaaatc 2701 accatattca gcagcagaca gcctaccaga ccgcacaccg agataatgga aaccagcatc 2761 gaccaggatt tgatggtctc gccgatagtc aggttaaagt actctttgaa cagccagaag 2821 cccggatcgt tcacatgaga gaaatcacac taccggcccc aaccgc // LOCUS R27REPFIA 1507 bp ds-DNA BCT 13-MAR-1990 DEFINITION Plasmid R27 replication region. ACCESSION Y00547 KEYWORDS origin of replication. SOURCE Plasmid R27 DNA. ORGANISM Plasmid R27 Prokaryota; Bacteria. REFERENCE 1 (bases 1 to 1507) AUTHORS Saul,D., Lane,D. and Bergquist,P.L. TITLE A replication region of the IncHI plasmid, R27, is highly homologous with the RepFIA replicon of F JOURNAL Mol. Microbiol. 2, 219-225 (1988) STANDARD full staff_entry COMMENT Draft entry and printed sequence for [1] kindly provided by D.Saul, 15-DEC-1988. FEATURES from to/span description ORF 543 1298 ORF rpt 352 371 inc repeat rpt 373 391 inc repeat rpt 406 424 inc repeat rpt 428 446 inc repeat rpt 1300 1483 repeats of about 50 bp signal 482 486 -35 region signal 504 509 -10 region BASE COUNT 387 a 351 c 360 g 409 t ORIGIN 1 gagctcacgg atttcaattt gttccggggt aatgggggag gcttttggtg tttttccctg 61 ccgctcatca cgtaattaat aggctgtatg tctaacttct ggccacagat ataatcgagc 121 cagcagtgct cgccgcagcc gagcgacagg gcgaagcccc gagtgagcga ggaagcacca 181 tggaacagta ctcataaatt ctgcatacgc tcaatgcctg caaaatcacc tcccctaggg 241 gttatccact tatccacggg gatattttta taagatcttt tttaatagtt gttagatctt 301 tatttttaga atgcccacag gcctttatcc atgcgggttc cagagaggga tctgtgacaa 361 aacgcccttt cagtgtgaca aatcaccctc aaatagccgc cctttctgtg acaagttgcc 421 cttaaccctg tgacaaattg ccctcaggaa gcgttgcttt tcacaaagtt atccatccct 481 gttgactctg ttttatgaag tgtgacaatc ttaaagtctg tcacacttca catggacctg 541 tcatggcgga aatagcggtt ataaaccata aaaaacgtaa aaatagcccg cggattgtcc 601 agtcaaatga gctgactgag gcggcatata gtctctccag ggatcaaaag cgtctgctgt 661 atctgttcgt tcaccagatc agaaaatccg acggctccct gcaggaacat gacggcatct 721 gcgaaattca cgttgctaaa tacgctgaaa cattcgggtt gacctccgct gaagccagta 781 aggatatacg acaggcttta aaaggttttg cgggtaagga agtggttttc tatcgccctg 841 aagaggatgc cggcgatgaa aaagggtatg aatcctttcc ctggtttatt aaacgtgcgc 901 acagcccatc cagagggctt tacagcgtac atatcaaccc atatctgatt cccttcttca 961 tcgggttaca gaaccggttt acgcagttcc ggctcagtga aacaaaagag attaccaatc 1021 cgtacgccat gcgtttatac gaatctctgt gccagtaccg taaacctgat ggctcaggtg 1081 tcgtgtccct gaaaatcgac tggatcatgg aacgctacca gctacctcaa agttaccagc 1141 gtatgccgga ctttcgccgc cgtttcctga aggcaagtgt tgacgagatc aacagccgga 1201 caccaatgcg cctttcttac atcgagaaaa agaaaggccg ccagacgacg catatcgtat 1261 tttccttccg tgatataacc tccatgacga ttgaatagtt gagggttatc tgtcacagat 1321 ttaagggtgg ttcgtcacat ttgatctgga aggttgaggg ttatctgtca cagatttaag 1381 ggtggttcgt cacatttgat ctggaaggtt gagggtgatt tgtcacagat ttaagggtgg 1441 ttcgtcacat ttgatctgga aggttgaggg tgatttgtca cagttttgct gttccctccc 1501 tggggaa //