Path: utzoo!attcan!uunet!bionet!haploid!jeh From: jeh@haploid (Jamie Hayden) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003192110.AA15359@haploid.LANL.GOV> Date: 19 Mar 90 21:10:46 GMT Sender: daemon@genbank.BIO.NET Lines: 125 Approved: lear@genbank.bio.net LOCUS ECOPANA 1904 bp ds-DNA BCT 04-JAN-1990 DEFINITION E.coli pantothenate permease gene, complete cds. ACCESSION M30953 KEYWORDS pantothenate permease. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 1904) AUTHORS Jackowski,S. and Alix,J.-H. TITLE NONE GIVEN JOURNAL Unpublished (1990) 332 N. Lauderdale, Memphis, TN 38101 STANDARD full staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by S.Jackowski, 20-DEC-1989. FEATURES from to/span description pept 432 1880 pantothenate permease binding 422 426 ribosome binding site signal 144 151 -35 region signal 164 169 -10 region BASE COUNT 366 a 482 c 533 g 523 t ORIGIN 1 ctgcagatcc gcatcatgaa tgacgagaac ttccagcatg gtggcactaa catccactat 61 ctggagaaaa aactcggtct tcaggaaaaa taagactgct aaagcgtcaa aaggccggat 121 tttccggctt ttttattact ggggatcgac aacccccata aggtacaatc cccgctttct 181 tcacccatca gggacaaaaa atggacactc gttttgttca ggcccataaa gaggcgcgct 241 gggcgctggg gctgaccctt ttgtatctgg cagtttggtt agtagccgct tacttatctg 301 gcgttgcccc ggttttaccg gctttccgcg ctggtttgag atggcctgca tcctgacgcc 361 gctgctgttt attggactgt gctgggcgat ggtgaaattt atctatcgcg atatcccact 421 ggaggatgac gatgcagctt gaagtaattc taccgctggt cgcctatctg gtggtggtgt 481 tcggtatctc ggtttatgcg atgcgtaaac ggagcaccgg caccttcctt aatgagtatt 541 tcctcggcag ccgctctatg ggcggtattg tgctggcgat gacgctcacc gcgacctata 601 tcagtgccag ttcgtttatc ggcgggccag gagctgctta taaatacggg ctgggctggg 661 tattgctggc gatgattcag cttcctgcag tctggctttc actcggtatt ctcggcaaga 721 agtttgcgat tcttgcgcgc cgctacaatg cagtgacgct gaacgatatg ctgtttgccc 781 gctaccagag tcgtcttctg gtgtggctgg cgagtttgag tttgctggtt gcgttcgttg 841 gtgcgatgac cgtgcagttt atcggcggtg cgcgcctgct ggaaaccgcg gcgggtattc 901 cttatgaaac cgggctgctg atttttggta tcagcattgc gttatatacc gcctttggtg 961 gcttcgcgcc agctgctgaa cgacaccatg caagggcttg tgatgctgat tggcaccgtt 1021 gtgctgctta ttggcgtagt acatgcgctg gcggcttaag taacgcagta cagaccttgc 1081 aaaccatcga tccgcaactg gttacgccac aaggcgctga cgatattctg tcgcctgcct 1141 ttatgacgtc gttctgggta ctggtgtgtt ttggcgtgat tggccttgcg catactgcgg 1201 tgcgctgtat ctcttataaa gacagcaaag ccgtacatcg ggggatcatc atcggtacga 1261 ttgtggtcgc aattctgatg ttcggtatgc acctggccgg agcgttaggt cgggcggtga 1321 tccccgatct tcacgtaccg gacctggtga tcccaacgtt aatggtaaaa gtgctgccac 1381 cgtttgctgc cgggatcttc ctggctgcac cgatggctgc gatcatgtcg acaattaacg 1441 cccaactgct gcaaagttcc gctacgatca ttaaagatct ctatctgaat atccgtccgg 1501 atcaaatgca aaacgagacg cgtctgaagc ggatgtcggc ggtaattacg ttagttctcg 1561 gcgcgttgct gctgcttgcc gcctggaagc cgccagaaat gatcatctgg ctgaatttgt 1621 tggccttcgg tgggctggaa gccgttttcc tgtggccgct ggtgctgggt ctttactggg 1681 aacgcgccaa cgccaaaggc gcgctaagtg cgatgatcgt tggcggcgtg ctgtatgccg 1741 tactcgcgac gctgaatatt cagtacctgg gcttccaccc tatcgtgccc tcgttactac 1801 taagtttgct ggctttcctg gtcggaaacc gtttcggtac atccgtcccg caagctaccg 1861 ttttgactac tgataaataa agagttttgc catgccttgg atcc // LOCUS RBFTOPA 2497 bp ds-DNA VRL 30-JAN-1990 DEFINITION Shope fibroma virus DNA topoisomerase gene, complete cds. ACCESSION M31723 KEYWORDS topoisomerase. SOURCE Shope fibroma virus (strain KASZA) viral DNA. ORGANISM Rabbit fibroma virus Viridae; ds-DNA enveloped viruses; Poxviridae; Leporipoxvirus. REFERENCE 1 (sites; for [2]) AUTHORS Upton,C., Opgenorth,A., Traktman,P. and McFadden,G. TITLE Identification and DNA sequence of the Shope fibroma virus DNA topoisomerase gene JOURNAL Virology (1990) In press STANDARD full staff_review REFERENCE 2 (bases 1 to 2497) AUTHORS Upton,C., Opgenorth,A., Traktman,P. and McFadden,G. TITLE Identification and DNA sequence of the Shope fibroma virus DNA topoisomerase gene JOURNAL Unpublished (1990) U.Alberta, Biochemistry, Alberta, T6G 2H7 Canada STANDARD full staff_review COMMENT Draft entry and computer-readable sequence [2] kindly submitted by C.Upton, 30-JAN-1990. FEATURES from to/span description pept 818 1762 DNA topoisomerase ORF 194 787 S2 ORF ORF 1762 2211 D2 ORF BASE COUNT 933 a 435 c 449 g 680 t ORIGIN 1 ggatccaata aatacgcttt aattctttgt ataatttcta ttaacacaga ttccttggat 61 tccatttaat gtaagaaaca accacacttt ttataaaaag tgaaatagta aatacttgtt 121 ttttaaaata tatcgatata taaatacata actagtaaat tgaaaaataa aagatagatt 181 ataaatttca ataatgtctt ggtccataaa cctaggaagt ggatccggtg acaattttaa 241 aacactcgat gagattagag cacatgtaaa atctacaaca gaaacggcga tcgcggacga 301 tattttcccg gaagatatca aaattccatc gcctaaacag agtaaaacca aacgtattac 361 tactcctcgt aagaaaccgg tacctaaaac atctaagaag aaggaggaag aactactacc 421 tcctccatac aaagaggaag ttaaggagtc ggaagaagag gaagaagaag aagcggttgt 481 ggaagagtct cctaaatctc accaggagtc taccagtaac acacaaaata cgacaccgat 541 gacggataca cgagatacta tggatacgtc tgacttaaaa ctagttacgg aacaaattat 601 taaagaaatg aaagcgttaa atgcgaaagt atccgctgtg tcaactatct tggaaacgat 661 tcaagcggcc tccgttggac gacagtatac tatgctgact aaaaacatag aagaactaag 721 aatgcttgtg gtatgtggaa aggaacaagt ggttaggaaa aaaactagac atacaactac 781 caaaaaataa ctctctgttt ttttacgaat aaataaaatg agagctttta catacaagga 841 tgggaaatta tacgaggata aagaactgac tatacccgta cattgtagta atcctacgta 901 cgagattctt aaacatgtga agattccgtc gcatttaacc gacgttatcg tgtatgaaca 961 gacctacgaa caatcgttat cgcggttaat atttgtcgga ttggattcga aaggacgtcg 1021 tcagtacttt tacgggaaga tgcacgtaca aagacgaaac tccgcccgcg atactatatt 1081 tatcaaagta catcgtgtta tagataaaat acataaattt atagatgata cgattgaaca 1141 caaaaacgat gtcttatttc aactaggcgt gtttatgttg atggaaacga gtttttttat 1201 acgaatgggt aaagtaaagt accttaagga aaatgatacg gtgggattgt taacattgaa 1261 gaataaaaat atcgtacgag agaatagaaa aatattaata cacttcgtgg gaaaggataa 1321 gataatacac aactttaccg tacatagttc caataggcta tacaaacctt tactgcgcct 1381 aatcggtcgt aaagaaccag atagcttttt atttcataag ctaagtgaga agaaagtata 1441 caaagcggta caacagttcg gtatacgttt aaaagattta cgcacctatg gtgtgaatta 1501 cacgttttta tacaatttct ggacgaacgt aaagtctctc aatccaattc ctcctattaa 1561 gaagatgata tctacgtcta ttaaacagac tgccgatatc gtgggtcata ctccgtctat 1621 ttcaaaaaga gcgtatatag caaatactgt actggagtat ctaacacacg attcggagtt 1681 aataaatacg ataagagaca tatcattcga cgagtttatt cggttaatta cggattatat 1741 caccaacaca caaacggtgt aatggacgaa cgactcagaa ctctagctct aacgtttttt 1801 tccggggaat taacgacgac ggatgttatg gcgttaaaac ttcatctttt gaatacggct 1861 cccacggata ctgtattttg tacggacgaa aacaataagt ttatgataga ttataaatac 1921 gaaacgtgtt taacgtcgca ctacttaaat aaaaaaacaa aggttatcca acccaatcaa 1981 tatcaaaaat attcccccac tatcgccacg gaactcacta attatgacat tattttagag 2041 gacgtctgtt cgtatatcaa cgagtctaaa ctccttaaac ggtttgtcaa gttatacaaa 2101 acgactaata gaaaacaaaa tataaaaata atagaagcaa gtaaacgctt aaaaatcgca 2161 ctaaataagg gaattgatta cgattatatt aaagaagtgt tctaccatgg atgattcaaa 2221 aaagaaacgg ggaactgatt acatcgagga actgatctta ttatacgaag acgttcctaa 2281 ccccgtacaa actgatgata tgaaccacga agttgagtta accttcattc aaccacccgt 2341 tattacgtta agtacactgt taccttttgc tacatctcag gaatcgtata ttttgtttac 2401 cgtgacgaat aaaggcgtta aaattagaaa cagaataaac ttatcgaaga tccatggact 2461 cgatttaaag aacattcagt tggtggattc catcgat //