Path: utzoo!attcan!uunet!cs.utexas.edu!mailrus!iuvax!bionet!life!mia From: mia@life (Mia McLeod) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003211516.AA25892@life.LANL.GOV> Date: 21 Mar 90 15:16:47 GMT Sender: daemon@genbank.BIO.NET Lines: 100 Approved: lear@genbank.bio.net LOCUS HUMMSCA 1719 bp ss-mRNA PRI 31-JAN-1990 DEFINITION Human GT mitochondrial solute carrier protein homologue mRNA, complete cds. ACCESSION M31659 KEYWORDS . SOURCE Human (Graves' disease patient) thyroid, cDNA to mRNA, clone hGT-7. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1719) AUTHORS Zarrilli,R., Oates,E.L., McBride,O.W., Lerman,M.I., Chan,J.Y., Santisteban,P., Ursini,M.V., Notkins,A.L. and Kohn,L.D. TITLE Sequence and chromosomal assignment of a novel cDNA identified by immunoscreening of a thyroid expression library: Similarity to a family of mitochondrial solute carrier proteins JOURNAL Mol. Endocrinol. 3, 1498-1508 (1989) STANDARD simple staff_review COMMENT The region between base pairs 195-297 appears to be an aberrantly spliced intron. An acceptor splice consensus sequence is present at the 3' end of this region, but no donor site is found at its 5' end. Upon readthrough of this intron boundary, a stop codon is found at positions 245-247. FEATURES from to/span description pept 65 194 GT mitochondrial solute carrier protein homologue 298 1217 GT mitochondrial solute carrier protein homologue mRNA < 1 1719 GT mRNA signal 1698 1703 poly-A signal BASE COUNT 463 a 344 c 370 g 542 t ORIGIN Chromosome 10. 1 cctatggtcc cgtccggtgt tctgtaagtt ggcaacctag gctcctgacg cgaccctggt 61 cctgatggcg gcggcgacgg ccgcggcagc cctggcggcg gccgatcccc ctcccgcaat 121 gccaggggcg gcaggggccg gagggcccac aacccgcaga gacttctact ggctgcgctc 181 ctttctggcc gggagaagaa gaggaggtta cttcaaacag aacctggcag ttggattaat 241 accttgaagt gtctgtctcc ataaccacat tttagcaaga ttcccagcct tcctcaggta 301 ttgctggatg ctgtgccaaa acaacagttg ctccattgga tcgagtaaag gttttattac 361 aagctcacaa tcaccattac aagcatttag gagtattttc tgcattgcgt gctgttcctc 421 aaaaagaagg attccttgga ttgtataaag gaaatggtgc aatgatgatt cgaatctttc 481 cctatggtgc aatccagttt atggcatttg agcattataa aacgttaatt actacgaagc 541 tgggaatttc aggtcatgtg cacagattaa tggctggatc catggcaggt atgacagcag 601 ttatctgtac tgaccctgtt gacatggtta gggtccgcct agcattccag gtgaaagggg 661 aacaccgcta tacaggaatt attcatgctt tcaaaacaat ttatgcaaag gaaggtggtt 721 tctttggatt ttacagaggt ctgatgccta ctattttagg aatggctcca tatgcaggtg 781 tttcattttt tacttttggt accttgaaga gtgttgggct ttcccatgct cctacccttc 841 ttggcagtcc ttcatcagac aatcctaatg tcttagtttt gaaaactcat gtaaacttac 901 tttgtggtgg tgttgctcga gcaatagcgc agacaatatc ctacccattt gatgtgactc 961 gtcggcgaat gcaattagga actgttctgc cggaatttga aaagtgcctt accatgcggg 1021 atactatgaa gtatgactat ggacaccatg gaattcgaaa aggactctat cgtggtttat 1081 ctcttaatta cattcgctgt attccctctc aagcagtggc tttctacaac atacgaactt 1141 atgaagcagt tttttcacct caactaaaaa aaaattatgg ttggtttttc ttaatacatt 1201 ctcagaggga gaaatgaaac attactataa ttgtgggggg aacattactt gaatggggat 1261 atttaccctg tcacagagcc atggtatttt agtacttgat tatttttctt tagtcagatc 1321 agaactgctt accatacttt ttagatgcgc caaacattat accttagaac attgaagaaa 1381 atatcgcagc taagctgatg cctggctaaa ccgctttaat gttttatttg gaagtagaaa 1441 ctagctttac ggggttcaag aggttggcca ttagctttcg tcatgctgtt caaagttttt 1501 aattgttatc ggtttttaaa agactgacag tgtttattat attaaaataa ggttatattg 1561 caatagaata atagagaatt gaatttttaa gttgctatga aacagtccag ccattgacat 1621 tttatttttg ttatctctct tctcacaatt atgctccact ggataatagg aaaaacactt 1681 ctttccttca ttttttaaat aaaaattaat gtttgattt // LOCUS RATMSCA 1038 bp ss-mRNA ROD 19-MAR-1990 DEFINITION Rat mitochondrial solute carrier protein mRNA, 5' end. ACCESSION M32973 KEYWORDS . SOURCE Rat FRTL-5 thyroid cell line, cDNA to mRNA, clone rF5-7. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1038) AUTHORS Zarrilli,R., Oates,E.L., McBride,O.W., Lerman,M.I., Chan,J.Y., Santisteban,P., Ursini,M.V., Notkins,A.L. and Kohn,L.D. TITLE Sequence and chromosomal assignment of a novel cDNA identified by immunoscreening of a thyroid expression library: Similarity to a family of mitochondrial solute carrier proteins JOURNAL Mol. Endocrinol. 3, 1498-1508 (1989) STANDARD simple staff_review FEATURES from to/span description pept 73 > 1038 mitochondrial solute carrier protein BASE COUNT 230 a 261 c 275 g 272 t ORIGIN 1 cggcaacagc catggtgctt cctagtgttt tgtaagttgg cagcggaggc tcgggacgtg 61 gcgcaggtcc ggatggcggc cctggtggct gcagcggccc tggcggcggc cgagcctcca 121 cccgcggtgc ccgcagcggc ggggagcggg ggcccgacct ctcgccgaga cttctactgg 181 ctgcgttcct tcttagccgg gagtattgct ggatgctgtg ccaaaaccac agttgctccc 241 ttggatcgag taaaggtttt attacaagct cacaaccacc attacaaaca tttaggggta 301 ctttctccac tgcgcgctgt tccccaaaag gaaggctacc ttggattata taaaggaaac 361 ggtgcaatga tgattcgaat ctttccctac ggtgcaatcc agttcatggc ctttgagcat 421 tataaaacgt tcattactac aaagctggga gtttctggtc atgtgcatag attaatggct 481 ggatccatgg caggtaagat gagcatgaca gcagttatct gcacttaccc tctggatgtg 541 gtcagggtgc gcctggcctt ccaagtgaaa ggtgaacaca cctattcagg gatcatccat 601 gcgttcaaga caatctatgc caaggaaggt ggtttccttg gattctacag aggtctgatg 661 cctactatat taggaatggc cccatatgca agtgtttcct tttttacctt tggtaccttg 721 aagagtgttg ggctttccta tgctcccacc ctgcttggcc gaccatcgtc cgacaacccc 781 aacgtcttag tcttgaaaac tcacataaac ttactttgtg gtggtgttgc tcgagcaata 841 gcacagacga tatcctaccc atttgatgta acccgtcgga gaatgcagtt gggggcagtc 901 ctaccggagt ttgagaagtg ccttaccatg agggagacca tgaagtatgt ctatggacac 961 catgggattc ggagaggatt gtaccgtggc ttatctctga actacatccg ctgtattccc 1021 tctcaagctg tggctttc //