Path: utzoo!attcan!uunet!mailrus!iuvax!bionet!haploid!jeh From: jeh@haploid (Jamie Hayden) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003221657.AA21480@haploid.LANL.GOV> Date: 22 Mar 90 16:57:55 GMT Sender: daemon@genbank.BIO.NET Lines: 104 Approved: lear@genbank.bio.net LOCUS MUSMHTHY19 4288 bp ds-DNA ROD 24-JUL-1989 DEFINITION Mouse MHC nonclassical class I Thy19.4 gene (H-2 d haplotype). ACCESSION M26156 KEYWORDS cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex. SOURCE M.musculus domesticus (strain Balb/c; H-2 d haplotype) DNA, clone 19.4. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 4288) AUTHORS Brorson,K.A., Richards,S., Hunt,S.W.III., Cheroutre,H., Fischer Lindahl,K. and Hood,L. TITLE Analysis of a new class I gene mapping to the Hmt region of the mouse JOURNAL Immunogenetics 30, 273-283 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by K.A.Brorson, 12-JUL-1989. FEATURES from to/span description pept 768 861 MHC Thy19.4, exon 1 1050 1319 MHC Thy19.4, exon 2 1539 1814 MHC Thy19.4, exon 3 2541 2816 MHC Thy19.4, exon 4 2938 3062 MHC Thy19.4, exon 5 IVS 862 1049 MHC Thy19.4 intron A IVS 1320 1538 MHC Thy19.4 intron B IVS 1815 2540 MHC Thy19.4 intron C IVS 2817 2937 MHC Thy19.4 intron D BASE COUNT 1295 a 974 c 925 g 1094 t ORIGIN Chromosome 17. 1 aagctttact acagagcaat tgtgataaaa actgcatggt actggtatag agacagacaa 61 gtggaccaat ggaatagaat tgaagaccca gaaatgaacc cacacaccta tggtcacttg 121 atcttcgaca agggagccaa aaccatccag tggaagaaag acagcatttt caacaattgg 181 tgctggcaca actggttgtt atcatgtaga agaatgcgaa tcgatccata cttatctcct 241 tgtactaagg tcaaatctaa gtggatcaag gaacttcaca taaaaccaga gacactgaaa 301 cttatagagg agaaagtggg gaaaagccgt tgaacagtat tctttcttat aggttactaa 361 aatctctcaa gtgaattttt taagattcta tttctagtaa aaaaaataat ctaataaata 421 ctgatagaga caaactataa ttaggattta ccctaattct taaagccata cagagacaaa 481 aaccttagca agacctggta ggaaatgtaa gaatgatatc tcgtcaggtg tctgggcaaa 541 ggcaaggcac aaggagaggc tcctagagtc tccttagggg aattcctcac aatcctggag 601 tttcccttct tttgtaagcc aaataaagat cttctgcatg gacactgatg actatgctcc 661 aattctcatt cctactggct atgatgttcc tagagaactg ctgttgaagt tcctcattat 721 atagtcacca aggaccaaca gagacagact cgctccaaat ccagagaatg gagacttcag 781 cattcttcac tctcctcttc actctctacc tgctgcttgg gcttcccttg ccctggcaca 841 gacctttaga ggtgagtgca ggtcttgaaa aacaggtctt ttacaagaag agcacctggg 901 aatcccaccc agccagacct ttccagcagg gctacccaca tcccccactc ccttaaaccc 961 tgcacctcct gcttcccttc taccacctgc cctggatccc catgagggaa gaaggttcaa 1021 gccaaacatc agccttttgc ttcctccagg atcccactcc ttgcggtact tcgacatcgc 1081 agtgtcaaga cctggcctag aggagaccca ctacatgact gttggctatg tggatgacac 1141 agagtttgtg cattttgaca atgaggctga gaatccgagg tttgagcccc gagtgccttg 1201 gatggaacag atgggacaga agtactggga tgaccagaca cgcattgcga aagctgcaga 1261 acagcagatt agagtgtact ttcagaaact gcgagactac tacaaccaga gccagaacag 1321 tgagtaaccc atgaggccaa gtggttgcca aacctcttcc atgtccccat atcaccaagt 1381 tcagcctaag gtaatgagac cacagaaagt attgacccag aagggttgag gtgcctatga 1441 gctgttttat ggttgtcagt ttaggttcaa atctggttgg gtgggtaggg aggatgaaag 1501 ggctaagcgg gagggactaa cttgtgatac ggaaccaggt tctcacacca tccaaaggat 1561 gactggctgc tacattggac cagacgggca cctacttcac gcataccgtc agtttggtta 1621 tgatgggcaa gattacctca ctctgaatga agatctgagc acctggactg cagcagagtc 1681 ggcagctgag atcacccgta gagagtggga ggcaactaat gtggctgagt tctggagggt 1741 ctacttggag ggcccttgca tggtgtggct ctttaaatac ctgacagtgg gaaatgagac 1801 tctactgcgc acaggtacga ggggcaaaga agtaactcct cttaatgaac tggagctcat 1861 gtctcctgag aagggagaaa tgggatcagc tagaattctc tgtgtatctg tctctctgac 1921 tctgtctcta tgtgtctctt tgtttctgtc tccctagctc tgcctctctg tgtttctgtc 1981 tctctgtctc acctctcacc tctctctgtg ccctcctcct ccctctctta cacacacaca 2041 cacacacaca cacacacaca caccttgaga aggaagaatg atcctgagtt tcctggttca 2101 acatcatagg acgtctctcc agaggactca ctcttctctc caagtctcag ttcagaatct 2161 atctcagaat aggagaaaag atccctaaac ttgctattcc cttcaatctg cagcctgtac 2221 cctctctgag ttagattctc tgaccacact caatggtatg atacttacgg ctgcagtgat 2281 gtagtttctt ggcttcactc agtcaggaca aaagttgctc ttttcctggt aacccagcgt 2341 ctcctaccct aggctaggtc accttgattc tagaactttt caagcagttt attatcccag 2401 atgcttgagt acagttgcta tgtaggtctg cacatatccc caccctattc ccctgtctag 2461 tcccaaaatg atcacaataa caccaaatcc aaagggggaa aaaaagtaaa tgtactactt 2521 atcctactct tcctcctcag agcccccaaa ggcatatgtg acccatcacc ccagacctga 2581 aggtgatgtc accctgaggt gctgggccct gggcttctac ccttctgaca tcatcatgat 2641 ctggcaaaga gatggggagg accagaccca ggacatggat gttattgaga ccagacctgc 2701 aggggatgga accttccaga agtgggtagc tgtggtggtg ccttctggga aggagcagaa 2761 ttacacatgc catgtggctc atgagggact gcctgagccc ctcaccctga gatggagtaa 2821 gtaggatgta ggcacatagc ctgtggttag agaaggcaaa agcctttctg gagatcctga 2881 gcagggtcaa ggttgagatc tggggtcagg gtcctacaat tttacatttc ttttcaggta 2941 gacctcctca gtctttcatt ttcatcataa tagttgctgt tggcctggtt ctcctgggag 3001 cttcagtggc tactcttgtc atgtggaaga agagctcggg tggggaaagg ggcagcctct 3061 gatttttttt ttccaactga gagactctaa gccccagata agttttctct gcctccttgt 3121 tgggaaggag tgtggcccat tattcccaaa gacacaattc tgaatgtcat aactgaaaca 3181 ttttaatctc aaaaaatcaa aatccccaaa atacatttaa aaaagaaata caaaaaaagg 3241 gaaaaaagta tccaaaccat aagatagatt taaagggata tttatacaca cacacaagaa 3301 aaggaaaaag aaaaagaaga aaaaggaaac gaagaaaaag aaaaaggaaa gaaggaagga 3361 aggaaggaag gaaggaagga aggaaggaag gaaggaagga aggaaggaag gaagagaaat 3421 cacgatagaa gaggggtctc tgtatgaact cagatacact aacaaaagac actgatatag 3481 cattgtaagg aggaaaccat attcacaaag gcctagatgg ggaaacaaaa tgtgtaaatg 3541 tatatcccta tggttgtcag ttatgtgcag ggagcatcat actggcattt gtctgaaata 3601 gtagtacaga caatataagt cttctgggaa tattaataaa attccatagt ggagtgctac 3661 caatacccag tcatcaaaag acccaagatc ttgataaatt ttatctacac acatggaaac 3721 acaccaaaag tacatctcca gtagttaaga acattttagt ctttcatact gtgccatgct 3781 cacaaagtcc acactgtaac gcatcttcac taactcaatt ttgccaaata tgtaaactgt 3841 tagaaccctc agaaaaactt ttacacaatt cgagcctcca ttgttagaaa tgatgtaaga 3901 atgaaataaa tcatactttt tatatgatgc tgaagattgt tttgtttatc cttgctttct 3961 ttttattaat ttatttattc actttatatg ccaatcgaac ccctagtttc tcttctctcc 4021 cagtccaacc cttgcaaatc tctcccccat aaactccctc tccttcttct cagagaaagg 4081 gaaattttca ttgggaaccc aaccctgaga catccagtca cagtaggact aaatgcaccc 4141 tctcccgagt agacccaacc agacattcca attagaggaa ggggatccat ggcaggtaac 4201 agagtaagag acagttaaaa ctaaaactac taaactttat gtgagagagg agtattgcag 4261 ggttagatca aggatgattc atgaattc //