Path: utzoo!attcan!uunet!bionet!life!mak From: mak@life (Melinda A. King) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003152211.AA15993@life.LANL.GOV> Date: 15 Mar 90 22:11:19 GMT Sender: daemon@genbank.BIO.NET Lines: 94 LOCUS AFATRN501 141 bp ds-DNA BCT 12-JAN-1990 DEFINITION Plasmid pJP4 containing transposon 501 DNA. ACCESSION M30711 KEYWORDS . SOURCE Plasmid pJP4 (from A.eutrophus) DNA. ORGANISM Plasmid pJP4 Prokaryota; Bacteria. REFERENCE 1 (bases 1 to 141) AUTHORS Smith,C.A. and Thomas,C.M. TITLE Comparison of the organisation of the genomes of phenotypically diverse plasmids of incompatibility group P: Members of the IncP-beta sub-group are closely related JOURNAL Mol. Gen. Genet. 206, 419-427 (1987) STANDARD simple staff_review FEATURES from to/span description trns 80 > 141 transposon 501 DNA BASE COUNT 32 a 48 c 36 g 25 t ORIGIN 1 atcgcccccc tgccctcccc tagagccgcc cgagatcgag gcggcttttt ttctcgagca 61 tcgccacttc cggcgaggca ggggtcgtct cagaaaacgg aaaataaagc acgctaaggc 121 atagccgaac ctgccaagct t // LOCUS HUMPPH1 190 bp ds-DNA PRI 12-JAN-1990 DEFINITION Human DNA/human papillomavirus type 16 DNA, 5' junction. ACCESSION M30709 KEYWORDS integration site. SEGMENT 1 of 2 SOURCE Human (individual SK) Bowenoid papule cell line SK-v DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 190) AUTHORS Schneider-Maunoury,S., Croissant,O. and Orth,G. TITLE Integration of human papillomavirus type 16 DNA sequences: A possible early event in the progression of genital tumors JOURNAL J. Virol. 61, 3295-3298 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 169 170 human DNA end/human papillomavirus DNA start ORF 170 > 190 ORF L2 BASE COUNT 70 a 30 c 37 g 53 t ORIGIN 1 taatagagac aggtctcatt cactatgttg cccaggtttg tatgaagttt tacagaaaat 61 taatacaaac agaaatcaga cctttaagag ttgagagtaa gtaggagagt taggacttgt 121 acttacttag ctattatata gtatagaacc cattgagtac cagaagaaac acagctacag 181 atacacttgc // LOCUS HUMPPH2 181 bp ds-DNA PRI 12-JAN-1990 DEFINITION Human DNA/human papillomavirus type 16 DNA, 3' junction. ACCESSION M31225 KEYWORDS integration site. SEGMENT 2 of 2 SOURCE Human (individual SK) Bowenoid papule cell line SK-v DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 181) AUTHORS Schneider-Maunoury,S., Croissant,O. and Orth,G. TITLE Integration of human papillomavirus type 16 DNA sequences: A possible early event in the progression of genital tumors JOURNAL J. Virol. 61, 3295-3298 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 28 29 human papillomavirus DNA end/human DNA start ORF < 1 > 28 ORF E2 BASE COUNT 52 a 14 c 36 g 79 t ORIGIN About 800 bp after segment 1. 1 gatgctaata ctttaaaatg tttaagattt taaacatttt aaaactattt cttaaggtaa 61 ctcttgacta gaagtctagt ctgttaagac cttgttgtta ctatacatat atgtatgtat 121 atgtgtatgt gtgtatatat atgtatgtgt atatgtgatg tgtgtgtata tgtgtgtgtg 181 g // LOCUS R75TRN501 150 bp ds-DNA BCT 12-JAN-1990 DEFINITION Plasmid R751 containing transposon 501 DNA. ACCESSION M30710 KEYWORDS . SOURCE Plasmid R751 (from E.coli) DNA. ORGANISM Plasmid R751 Prokaryota; Bacteria. REFERENCE 1 (bases 1 to 150) AUTHORS Smith,C.A. and Thomas,C.M. TITLE Comparison of the organisation of the genomes of phenotypically diverse plasmids of incompatibility group P: Members of the IncP-beta sub-group are closely related JOURNAL Mol. Gen. Genet. 206, 419-427 (1987) STANDARD simple staff_review FEATURES from to/span description trns 1 102 transposon 501 DNA BASE COUNT 40 a 32 c 38 g 40 t ORIGIN 1 gggggaaccg cagaattcgg aaaaaatcgt acgctaagct aacggtgttc tcgtgacagc 61 tctttgacta ggctttctaa ggggtcgtct cagaaaacgg aatctatggt cactcccgtt 121 tttgcaacac cgattttgac gataaattgg //