Path: utzoo!attcan!uunet!bionet!life!mia From: mia@life (Mia McLeod) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003152244.AA23421@life.LANL.GOV> Date: 15 Mar 90 22:44:31 GMT Sender: daemon@genbank.BIO.NET Lines: 194 LOCUS RICCPCTA 2526 bp ds-DNA ORG 18-JAN-1990 DEFINITION Rice chloroplast ribulose-1,5-bisphosphate carboxylase (rbcL) beta- and epsilon subunit (atpB and atpE) genes, complete cds. ACCESSION M31464 KEYWORDS ribulose-1,5-bisphosphate carboxylase. SOURCE Rice chloroplast DNA, clone Ct-3. ORGANISM Chloroplast Oryza sativa Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae; Oryza sativa. REFERENCE 1 (bases 1 to 2526) AUTHORS Moon,E., Kao,T.-h. and Wu,R. TITLE Sequence of the chloroplast-encoded atpB-atpE-trnM gene clusters from rice JOURNAL Nucleic Acids Res. 15, 4358-4359 (1987) STANDARD simple staff_review FEATURES from to/span description pept 398 1894 ribulose-1,5-bisphosphate carboxylase beta subunit (atpB) pept 1891 2304 ribulose-1,5-bisphosphate carboxylase epsilon subunit (atpE) BASE COUNT 770 a 459 c 563 g 734 t ORIGIN 1 cccccttttc ttattttgag tccaaatacc taaatactac gaaaattctc tgttgacagc 61 aatctatgct tcacagtagt atatattttg tatatcgaag tcctagataa gaaagtagag 121 taggcacaaa tcgtttacaa aaggcaaaat gtatatgaaa aaaagattga ttgaactttc 181 cgacgggctc attccatgag taaacgattg aatgggattc gtttgggcaa cgaaatcaag 241 tgctggtccc cttttctctc ttattgaatt aactaattca tttccttttg acttttggga 301 tttttggata tttttttggt gttgatttgg cattattcaa caagaaaaaa atcaaaattt 361 cgataaattc cttttttttg aaaattatgt gataattatg agaaccaatc ctactacttc 421 tcgtcccggg gtttctacaa ttgaagaaaa aagtacaggg cgtatcgatc aaattattgg 481 acccgtgctg gatgtcactt ttcccccggg caagttacct tatatttata atgctttggt 541 agtcaagagt cgagacactg agggtaagca aattaatgta acttgtgagg tacaacaatt 601 attaggaaat aatcgagtta gagctgtagc tatgagtgct acagatgggt tgatgagagg 661 aatggaagtg attgacacgg gagctcctct cagtgttcct gtcggtggag ctactcttgg 721 acgaattttc aacgttcttg gggagcctgt tgacaatttg ggtcctgtag atactagtgc 781 aacattccct attcatagat ccgcgcccgc ctttatcgag ttagatacga aattatccat 841 ctttgaaact ggtattaagg tggtcgatct tttagctcct tatcggcgtg gaggaaaaat 901 cggactattt gggggagctg gagtaggtaa aacagtactc atcatggaat taatcaacaa 961 tattgctaaa gctcacgggg gcgtatccgt atttggcgga gtaggggaac ggactcgtga 1021 aggaaatgat ctttatatgg aaatgaagga atctggagta attaatgaaa aaaatcttga 1081 ggaatcaaag gtagctctag tctatggcca aatgaatgaa ccgccaggag ctcgtatgag 1141 agttggtttg actgccctaa ctatggcaga atatttccga gatgttatta agcaagacgt 1201 gcttctattc atcgataata tctttcgttt tgttcaagca ggatcggagg tatctgcctt 1261 attagggaga atgccctctg cagtgggtta tcaacctact cttagtacag aaatgggttc 1321 tttgcaagaa agaattactt ctactaaaaa gggatctata acttcgatcc aagcggttta 1381 tgtacctgcg gacgatttga ccgaccctgc tcctgctaca acatttgcac atttggatgc 1441 tactaccgta ctttccagag gattagcttc caaagggatt tatcctgcag tagatccttt 1501 agattcaacc tcaactatgt tacaacctcg gatcgttggc aacgaacatt atgaaactgc 1561 gcaaagagtt aagcaaactt tacaacgtta caaagaactt caggacatta tcgcaattct 1621 tgggttggat gaattatcgg aggaggatcg tttaactgta gcaagagcac gaaaaattga 1681 gcgcttctta tcacaaccgt tttttgtggc agaagttttt accggttctc caggaaagta 1741 tgttggtctt gcagaaacta ttaggggatt tcaactaatc ctttccggag aattagacgg 1801 cctacccgaa caggcttttt atttggtggg taacatcgat gaagctagca cgaaagctat 1861 aaacttagaa gaggagaaca acttgaagaa atgaaattaa atctttatgt actgactcct 1921 aagcgaatta tttgggattg tgaagtgaaa gaaatcattt tatctactaa tagtggccaa 1981 attggcgtat taccaaacca cgcccccatt aacacagctg tagatatggg tcccttgaga 2041 atacgcctcc tcaacgatca atggttaacg gcggttctgt ggagcggttt tgccagaata 2101 gttaataatg agatcatcat tttaggaaat gatgcggaac tgggtagtga cattgatccg 2161 gaagaagctc aacaggcact tgaaatagcc gaagctaacg tgagtagagc tgagggtacg 2221 aaagaattgg ttgaagcgaa ggtagctctc agacgagcta ggatacgagt cgaggctgtt 2281 aattggattc ccccatctaa ttgaagacaa cccaacggtt tagttgatac aaagaaaaag 2341 ggaagagggg tagaaaaaat tattagatag cgaagcgaag tagggccaat gctatctagt 2401 aatttttcta cctacctacc tactattgga tttgaaccaa tgactcccgc cgtatgaaag 2461 caatactcta accactgagt taagtaggca atttatcacc acaaaggaag accctttact 2521 tcgatc // LOCUS RICCPCTB 2524 bp ds-DNA ORG 18-JAN-1990 DEFINITION Rice mitochondrial ribulose-1,5-bisphosphate carboxylase (rbcL) beta and epsilon subunit (atpB and atpE) pseudogenes, complete cds. ACCESSION M31465 KEYWORDS pseudogene; ribulose-1,5-bisphosphate carboxylase. SOURCE Rice chloroplast DNA, clone Ct-1. ORGANISM Chloroplast Oryza sativa Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae; Oryza sativa. REFERENCE 1 (bases 1 to 2524) AUTHORS Moon,E., Kao,T.-h. and Wu,R. TITLE Sequence of the chloroplast-encoded atpB-atpE-trnM gene clusters from rice JOURNAL Nucleic Acids Res. 15, 4358-4359 (1987) STANDARD simple staff_review FEATURES from to/span description pept.ps 398 1392 pseudo-ribulose-1,5-bisphosphate carboxylase beta subunit pept.ps 1389 2302 pseudo-ribulose-1,5-bisphosphate carboxylase epsilon subunit BASE COUNT 769 a 458 c 564 g 733 t ORIGIN 1 cccccttttc ttattttgag tccaaatacc taaatactac gaaaattctc tgttggcagc 61 aatctatgct tcacagtagt atatattttg tatatcgaag tcctagataa gaaagtagag 121 taggcacaaa tcgtttacaa aaggcaaaat gtatatgaaa aaaagattga ttgaactttc 181 cgacgggctc attccatgag taaacgattg aatgggattc gtttgggcaa cgaaatcaag 241 tgctggtccc cttttctctc ttattgaatt aactaattca tttccttttg acttttggga 301 tttttggata tttttttggt gttgatttgg cattattcaa caagaaaaaa atcaaaattt 361 cgataaattc cttttttttg aaaattatgt gataattatg agaaccaatc ctactacttc 421 tcgtcccggg gtttctacaa ttgaagaaaa aagtacaggg cgtatcgatc aaattattgg 481 acccgtgctg gatgtcactt ttcccccggg caagttacct tatatttata atgctttggt 541 agtcaagagt cgagacactg agggtaagca aattaatgta acttgtgagg tacaacaatt 601 attaggaaat aatcgagtta gagctgtagc tatgagtgct acagatgggt tgatgagagg 661 aatggaagtg attgacacgg gagctcctct cagtgttcct gtcggtggag ctactcttgg 721 acgaattttc aacgttcttg gggagcctgt tgacaatttg ggtcctgtag atactagtgc 781 aacattccct attcatagat ccgcgcccgc ctttatcgag ttagatacga aattatccat 841 ctttgaaact ggtattaagg tggtcgatct tttagctcct tatcggcgtg gaggaaaaat 901 cggactattt gggggagctg gagtaggtaa aacagtactc atcatggaat taatcaacaa 961 tattgctaaa gctcacgggg gcgtatccgt atttggcgga gtaggggaac ggactcgtga 1021 aggaaatgat ctttatatgg aaatgaagga atctggagta attaatgaaa aaaatcttga 1081 ggaatcaaag gtagctctag tctatggcca aatgaatgaa ccgccaggag ctcgtatgag 1141 agttggtttg actgccctaa ctatggcaga atatttccga gatgttatta agcaagacgt 1201 gctctattca tcgataatat ctttcgtttt gttcaagcag gatcggaggt atctgcctta 1261 ttagggagaa tgccctctgc agtgggttat caacctactc ttagtacaga aatgggttct 1321 ttgcaagaaa gaattacttc tactaaaaag ggatctataa cttcgatcca agcggtttat 1381 gtacctgcgg acgatttgac cgaccctgct cctgctacaa catttgcaca tttggatgct 1441 actaccgtac tttccagagg attagcttcc aaagggattt atctgcagta gatcctttag 1501 attcaacctc aactatgtta caacctcgga tcgttggcaa cgaacattat gaaactgcgc 1561 aaagagttaa gcaaacttta caacgttaca aagaacttca ggacattatc gcaattcttg 1621 ggttggatga attatcggag gaggatcgtt taactgtagc aagagcacga aaaattgagc 1681 gcttcttatc acaaccgttt tttgtggcag aagtttttac cggttctcca ggaaagtatg 1741 ttggtcttgc agaaactatt aggggatttc aactaatcct ttccggagaa ttagacggcc 1801 tacccgaaca ggctttttat ttggtgggta acatcgatga agctagcacg aaagctataa 1861 acttagaaga ggagaacaac ttgaagaaat gaaattaaat ctttatgtac tgactcctaa 1921 gcgaattatt tgggattgtg aagtgaaaga aatcatttta tctactaata gtggccaaat 1981 tggcgtatta ccaaaccacg cccccattaa cacagctgta gatatgggtc ccttgagaat 2041 acgcctcctc aacgatcaat ggttaacggc ggttctgtgg agcggttttg ccagaatagt 2101 taataatgag atcatcattt taggaaatga tgcggaactg ggtagtgaca ttgatccgga 2161 agaagctcaa caggcacttg aaatagccga agctaacgtg agtagagctg agggtacgaa 2221 agaattggtt gaagcgaagg tagctctcag acgagctagg atacgagtcg aggctgttaa 2281 ttggattccc ccatctaatt gaagacaacc caacggttta gttgatacaa agaaaaaggg 2341 aagaggggta gaaaaaatta ttagatagcg aagcgaagta gggccaatgc tatctagtaa 2401 tttttctacc tacctaccta ctattggatt tgaaccaatg actcccgccg tatgaaagca 2461 atactctaac cactgagtta agtaggcaat ttatcaccac aaaggaagac cctttacttc 2521 gatc // LOCUS RICMTBEA 2281 bp ds-DNA ORG 18-JAN-1990 DEFINITION Rice mitochondrial ribulose-1,5-bisphosphate carboxylase (rcbL) beta and epsilon subunit (atpB and atpE) pseudogene, complete cds. ACCESSION M31466 KEYWORDS pseudogene; ribulose-1,5-bisphosphate carboxylase. SOURCE Rice mitochondrion DNA, clone Mt-0. ORGANISM Mitochondrion Oryza sativa Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae; Oryza sativa. REFERENCE 1 (bases 1 to 2281) AUTHORS Moon,E., Kao,T.-h. and Wu,R. TITLE Sequence of the chloroplast-encoded atpB-atpE-trnM gene clusters from rice JOURNAL Nucleic Acids Res. 15, 4358-4359 (1987) STANDARD simple staff_review FEATURES from to/span description pept.ps 384 1657 pseudo-ribulose-1,5-bisphosphate carboxylase beta subunit pept.ps 1654 2067 pseudo-ribulose-1,5-bisphosphate carboxylase epsilon subunit BASE COUNT 710 a 416 c 488 g 667 t ORIGIN 1 cccctttctt attttgagtc caaataccta aatactatga aaattctctg ttgacagcaa 61 tctatgcttc acagtagtat atattttgta tatcgaagtc ctagataaga aatggagtag 121 gcacagatcc ttcacaaaag gcgaaatgta tatgaaaaaa agattgattg aactttccga 181 cggactcatg gaatgagtaa acgattgaat gggattcgtt tgggcaacga aatcaagtgc 241 tggtcccctt ttctctctta ttgaattaac taattcattt ccttttgact tttgttggat 301 ttttggatat ttttttggtg ttgatttggc attattcaac aagataaaaa gaaaaatttc 361 tataaattcc ttttttttta attatgagaa ccaatcctac tacttctcat cccggggttt 421 ctacaattga agaaaaaagt acagggcgta tcgatcaaat tattggaccc gtgctggatg 481 ccacttttcc cccgggcaag ttaccttata tttataacgc tttggtagtc gagacactga 541 gggtaagcaa attaatgtga cttgtgaggt acaacaatta ttaggaaata atcgagttag 601 aacgaaatta tccatctttg aaactggtat taaggtggtc gatcttttag ctccttatcg 661 gcgtggagga aaaatcggac tatttggggg aactggagta ggtaaaacag tactcatcat 721 ggaattaatc aacaatattg ctaaagctca tagaggcgta tccgtatttg gcggagtagg 781 ggaacggact cgtgaaggaa atgatcttta tatggaaata aaggagtaat taatgaaaaa 841 aatccttgag gaatcaaagg tagctctagt ctatggccaa atgaatgaac gccaggagct 901 cgtatgagag ttggtttgac tgccctaact atggcagaat atttccgaga tgttattaag 961 caagacgtgc ttctattcat cgataatatc tttcgttttg ttcaagcagg atcgggggta 1021 tttgccttat tagggagaat gccctctgca gtgggttatc aacctactct tagtacagaa 1081 atgggttctt tgcaagaaag aattacttct actaaaaagg gatctataac ttcgatccaa 1141 gcggtttatg tacctgcgga cgatttgacc gaccctgctc ctgccacaac atttgcacat 1201 ttggatgcta ctaccgtact ttccagagga ttagcttcca agggtattta tcctagatcc 1261 tttagattca acctcaacta tgttacaacc tcggatcgtt ggcaacgaac attatgaaac 1321 tgcgcaaaga gttaagcaaa ctttacaacg ttacaaagaa cttcaggaca ttatcgcaat 1381 tcttgggttg gatgaattat cggaggagga tcgtttaact gtagcaagag cacgaaaaat 1441 tgagcgcttc ctatcacaac cgttctttgt ggcagaagtt tttaccggtt ctccaggaaa 1501 gtatgttggt cttgcagaaa caattcgggg atttcaacta atcctttccg gagaattaga 1561 cggcctaccc gaacaggctt tttatttggt gggtaacatc gatgaagcta gcacgaaagc 1621 tataaactta gaagaggaaa acaacttgaa gaaatgaaat taaatcttta tgtactgact 1681 cctaagcgaa ttatttggga ttgtgaagtg aaagaaatca ttttttctac taatagtggc 1741 caaattggcg tattaccaaa ccacgccccc attaacacag ctgtagatat gggtcccttg 1801 agaatacgcc tcctcaacga tcaatggtta acggcggttc tgtggagcgg ttttgccaga 1861 atagttaata atgagatcat cattttagga aatgatgcgg aactgggtag tgacattgat 1921 ccggaagaag ctcaacaggc acttgaaata gccgaagcta acgtgagtag agctgagggt 1981 acgaaagaat tggttgaagc gaacgtagct ctcagacgag ctgggatacg agtcgaggct 2041 gttaattgga ttcccccatc taattgaaga caatccaacg gtttagttga tacaaagaaa 2101 aagggtctaa aaagttatta gatagcgaag cgaagtaagt ccaatgctat ctagtaattt 2161 ttctacctac ctacctacta ttggatttga accaatgact cccgccgtat gaaagcaata 2221 ctctaaccac tgagttaagt aggcaattta tcaccacaaa ggaagaccct ttacttcgat 2281 c //