Path: utzoo!attcan!uunet!bionet!life!mia From: mia@life (Mia McLeod) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003161741.AA14679@life.LANL.GOV> Date: 16 Mar 90 17:41:23 GMT Sender: daemon@genbank.BIO.NET Lines: 102 LOCUS CELHSP16E 124 bp ds-DNA INV 22-JAN-1990 DEFINITION C.elegans heat shock protein (hsp16-48) gene, partial cds. ACCESSION M31339 KEYWORDS heat shock protein. SOURCE C.elegans adult DNA. ORGANISM Caenorhabditis elegans Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Filariidae. REFERENCE 1 (bases 1 to 124) AUTHORS Kay,R.J., Russnak,R.H., Jones,D., Mathias,C. and Candido,E.P.M. TITLE Expression of intron-containing C.elegans heat shock genes in mouse cells demonstrates divergence of 3' splice site recognition sequences between nematodes and vertebrates, and an inhibitory effect of heat shock on the mammalian splicing apparatus JOURNAL Nucleic Acids Res. 15, 3723-3741 (1987) STANDARD simple staff_review FEATURES from to/span description pept < 1 5 heat shock protein (hsp16-48), exon N (AA at 3) 61 > 124 heat shock protein (hsp16-48), exon N+1 IVS 6 60 hsp16-48, intron X BASE COUNT 39 a 18 c 17 g 50 t ORIGIN 1 gagaggtaag aaaataatct ctttttcaat tgtttatttg tcaaatgttt tatttttcag 61 attgtaaatg acgaatctaa attctctgtt caactcgatg tttctcattt caaaccagaa 121 gatc // LOCUS CELHSP16F 124 bp ds-DNA INV 22-JAN-1990 DEFINITION C.elegans heat shock protein (hsp16-1) gene, partial cds. ACCESSION M31340 KEYWORDS heat shock protein. SOURCE C.elegans adult DNA. ORGANISM Caenorhabditis elegans Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Filariidae. REFERENCE 1 (bases 1 to 124) AUTHORS Kay,R.J., Russnak,R.H., Jones,D., Mathias,C. and Candido,E.P.M. TITLE Expression of intron-containing C.elegans heat shock genes in mouse cells demonstrates divergence of 3' splice site recognition sequences between nematodes and vertebrates, and an inhibitory effect of heat shock on the mammalian splicing apparatus JOURNAL Nucleic Acids Res. 15, 3723-3741 (1987) STANDARD simple staff_review FEATURES from to/span description pept < 1 8 heat shock protein (hsp16-1), exon N (AA at 3) 61 > 124 heat shock protein (hsp16-1), exon N+1 IVS 9 60 hsp16-1, intron X BASE COUNT 41 a 19 c 20 g 44 t ORIGIN 1 cttctgaggt aagtaacacg tttttttttc aagagtttgt ataaaaaaga tttctttcag 61 attgttaaca atgatcaaaa gtttgccata aatctcaatg tctcgcagtt caagccagaa 121 gatt // LOCUS CELHSP16G 186 bp ds-DNA SYN 22-JAN-1990 DEFINITION C.elegans synthetic heat shock protein (hsp16-1(D)) gene, partial cds. ACCESSION M31341 KEYWORDS heat shock protein. SOURCE C.elegans adult DNA. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 186) AUTHORS Kay,R.J., Russnak,R.H., Jones,D., Mathias,C. and Candido,E.P.M. TITLE Expression of intron-containing C.elegans heat shock genes in mouse cells demonstrates divergence of 3' splice site recognition sequences between nematodes and vertebrates, and an inhibitory effect of heat shock on the mammalian splicing apparatus JOURNAL Nucleic Acids Res. 15, 3723-3741 (1987) STANDARD simple staff_review FEATURES from to/span description pept < 1 / 8 heat shock protein (hsp16-1(D)), exon N (AA at 1) IVS 9 > 186 hsp16-1-(D), intron X BASE COUNT 60 a 24 c 31 g 71 t ORIGIN 1 cttctgaggt aagtaacacg tttttttttc aagagtttgt ataaaaaaga tttctttcag 61 attgtttgag gtaagtaaca cgtttttttt tcaagagttt gtataaaaaa gatttctttc 121 agattgttaa caatgatcaa aagtttgcca taaatctcaa tgtctcgcag ttcaagccag 181 aagatt // LOCUS MUSRRAA 121 bp ss-RNA RNA 17-JAN-1990 DEFINITION Mouse 5S ribosomal RNA. ACCESSION M31319 KEYWORDS 5S ribosomal RNA; ribosomal RNA. SOURCE Mouse (strain Swiss-Webster) Taper ascites cell RNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 121) AUTHORS Maxwell,E.S. and Martin,T.E. TITLE Complementarity of sequences in low molecular weight RNAs to regions of messenger and ribosomal RNAs JOURNAL Nucleic Acids Res. 14, 5741-5760 (1986) STANDARD simple staff_review FEATURES from to/span description rRNA 1 121 5S ribosomal RNA BASE COUNT 22 a 31 c 40 g 28 t ORIGIN 1 tctacggcca taccaccctg aacgcgcccg atctcgtgtg atgtcggaag ctaagcaggg 61 tcgggccttg gttagtactt ggatgggaga ccgcctggga ataccgggtg ctgtaggctt 121 t //