Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!life!mak From: mak@life (Melinda A. King) Newsgroups: bionet.molbio.genbank.updates Subject: (none) Message-ID: <9003162251.AA22597@life.LANL.GOV> Date: 16 Mar 90 22:51:49 GMT Sender: daemon@genbank.BIO.NET Lines: 228 LOCUS HUMAPOBX 665 bp ds-DNA PRI 25-OCT-1989 DEFINITION Human apolipoprotein B gene hypervariable region, 3' flank. ACCESSION J05157 KEYWORDS apolipoprotein B; hypervariable region. SOURCE Human HepG2, CaCo-2 and HeLa cell lines DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 665) AUTHORS Levy-Wilson,B. and Fortier,C. TITLE The limits of the DNase I-sensitive domain of the human apolipoprotein B gene coincide with the location of chromosomal anchorage loops and define the 5' and 3' boundaries of the gene JOURNAL J. Biol. Chem. 264, 21196-21204 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by B.Levy-Wilson, 13-OCT-1989. BASE COUNT 305 a 19 c 37 g 304 t ORIGIN Chromosome 2p24-p23. 1 aaaaagatga ggtaattgtg tttttataat taaatatttt ataattaaaa tatttataat 61 taaaatattt ataattaaat attttataat taaaatattt ataattaaat attttataat 121 taaaatattt ataattaaat attttataat taaaatattt ataattaaat attttataat 181 taaaatattt ataattaaat attttataat taaaatattt ataattaaat attttataat 241 taaaatattt ataattaaat attttataat taaaatgttt ataattaaat attttataat 301 taaaatgttt ataattacat attttataat taaaatgttt ataattacat attttataat 361 taaaatgttt ataattacat attttataat taaaatgttt ataattacat attttataat 421 taaaatgttt ataattacat attttataat tacatatttt ataaagtatt tataattaca 481 tattttataa ttaaagtatt tataattaca tattttataa ttaaagtatt tataattaca 541 tattttataa ttcaatattt tataaatagt taaaaagacg aggaaaaaat taaaaagacg 601 aggttattga tctcaggaat tgtatttgcc aagtgagaag gaaaaaatat tcacaaaggc 661 ttgta // LOCUS HUMDRD2A 2482 bp ss-mRNA PRI 25-OCT-1989 DEFINITION Human dopamine D2 receptor (DRD2) mRNA, complete cds. ACCESSION M29066 KEYWORDS dopamine D2 receptor; regulatory protein; transmembrane protein. SOURCE Human pituitary DNA, clone hPitD2. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 2482) AUTHORS Grandy,D.K., Marchionni,M.A., Makam,H., Stofko,R.E., Alfano,M., Frothingham,L., Fischer,J.B., Burke-Howie,K.J., Bunzow,J.R., Server,A.C. and Civelli,O. TITLE Cloning of the cDNA and gene for a human dopamine D2 receptor JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 9762-9766 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.K.Grandy, 13-OCT-1989. FEATURES from to/span description pept 34 1365 dopamine D2 receptor /nomgen="DRD2" /map="11q22-q23" /hgml_locus_uid="LR0083X" mRNA < 1 2482 DRD2 mRNA site 34 318 dopamine D2 receptor, exon 1 site 319 428 dopamine D2 receptor, exon 2 site 429 565 dopamine D2 receptor, exon 3 site 566 755 dopamine D2 receptor, exon 4 site 756 843 dopamine D2 receptor, exon 5 site 844 1171 dopamine D2 receptor, exon 6 site 1172 1365 dopamine D2 receptor, exon 7 signal 2458 2464 poly-A signal BASE COUNT 511 a 845 c 619 g 507 t ORIGIN 1 agagcctggc cacccagtgg ctccaccgcc ctgatggatc cactgaatct gtcctggtat 61 gatgatgatc tggagaggca gaactggagc cggcccttca acgggtcaga cgggaaggcg 121 gacagacccc actacaacta ctatgccaca ctgctcaccc tgctcatcgc tgtcatcgtc 181 ttcggcaacg tgctggtgtg catggctgtg tcccgcgaga aggcgctgca gaccaccacc 241 aactacctga tcgtcagcct cgcagtggcc gacctcctcg tcgccacact ggtcatgccc 301 tgggttgtct acctggaggt ggtaggtgag tggaaattca gcaggattca ctgtgacatc 361 ttcgtcactc tggacgtcat gatgtgcacg gcgagcatcc tgaacttgtg tgccatcagc 421 atcgacaggt acacagctgt ggccatgccc atgctgtaca atacgcgcta cagctccaag 481 cgccgggtca ccgtcatgat ctccatcgtc tgggtcctgt ccttcaccat ctcctgccca 541 ctcctcttcg gactcaataa cgcagaccag aacgagtgca tcattgccaa cccggccttc 601 gtggtctact cctccatcgt ctccttctac gtgcccttca ttgtcaccct gctggtctac 661 atcaagatct acattgtcct ccgcagacgc cgcaagcgag tcaacaccaa acgcagcagc 721 cgagctttca gggcccacct gagggctcca ctaaagggca actgtactca ccccgaggac 781 atgaaactct gcaccgttat catgaagtct aatgggagtt tcccagtgaa caggcggaga 841 gtggaggctg cccggcgagc ccaggagctg gagatggaga tgctctccag caccagccca 901 cccgagagga cccggtacag ccccatccca cccagccacc accagctgac tctccccgac 961 ccgtcccacc atggtctcca cagcactccc gacagccccg ccaaaccaga gaagaatggg 1021 catgccaaag accaccccaa gattgccaag atctttgaga tccagaccat gcccaatggc 1081 aaaacccgga cctccctcaa gaccatgagc cgtaggaagc tctcccagca gaaggagaag 1141 aaagccactc agatgctcgc cattgttctc ggcgtgttca tcatctgctg gctgcccttc 1201 ttcatcacac acatcctgaa catacactgt gactgcaaca tcccgcctgt cctgtacagc 1261 gccttcacgt ggctgggcta tgtcaacagc gccgtgaacc ccatcatcta caccaccttc 1321 aacattgagt tccgcaaggc cttcctgaag atcctccact gctgactctg ctgcctgccc 1381 gcacagcagc ctgcttccca cctccctgcc caggccggcc agcctcaccc ttgcgaaccg 1441 tgagcaggaa ggcctgggtg gatcggcctc ctcttcttag ccccggcagg ccctgcagtg 1501 ttcgcttggc tccatgctcc tcactgcccg cacaccctca ctctgccagg gcagtgctag 1561 tgagctgggc atggtaccag ccctggggct ggccccagct caggggcagc tcatagagtc 1621 ccccctccca cctccagtcc ccctatcctt ggcaccaaag atgcagccgc cttccttgac 1681 cttcctctgg ggctctaggg ttgctggagc ctgagtcagg gcccagaggc tgagttttct 1741 ctttgtgggg cttggcgtgg agcaggcggt ggggagagat ggacagttca caccctgcaa 1801 ggcccacagg aggcaagcaa gctctcttgc cgaggagcca ggcaacttca gtcctgggag 1861 acccatgtaa ataccagact gcaggttgga cccgagagat tcccaagcca aaaaccttag 1921 ctccctcccg caccccgatg tggacctcta ctttccaggc tagtccggac ccacctcacc 1981 ccgttacagc tccccaagtg gtttccacat gctctgagaa gaggagccct catcttgaag 2041 ggcccaggag ggtctatggg gagaggaact ccttggccta gcccaccctg ctgccttctg 2101 acggccctgc aatgtatccc ttctcacagc acatgctggc cagcctgggg cctggcaggg 2161 aggtcaggcc ctggaactct atctgggcct gggctaggga catcagaggt tctttgaggg 2221 actgcctctg ccacactctg acgcaaaacc actttccttt tctattcctt ctggcctttc 2281 ctctctcctg tttcccttcc cttccactgc ctctgcctta gaggagccca cggctaagag 2341 gctgctgaaa accatctggc ctggcctggc cctgccctga ggaaggaggg gaagctgcag 2401 cttgggagag cccctggggc ctagactctg taacatcact atccgatgca ccaaactaat 2461 aaaactttga cgagtcacct tc // LOCUS HUMLPLA 801 bp ds-DNA PRI 31-OCT-1989 DEFINITION Human lipoprotein lipase (LPL) gene, 5' flank. ACCESSION M29549 KEYWORDS lipoprotein lipase. SOURCE Human leukocyte DNA, clone LPL15/E. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 801) AUTHORS Kirchgessner,T.G., Chuat,J.-C., Heinzmann,C., Etienne,J., Guilhot,S., Svenson,K., Ameis,D., Pilon,C., D'Auriol,L., Andalibi,A., Schotz,M.C., Galibert,F. and Lusis,A.J. TITLE Organization of the human lipoprotein lipase gene and evolution of the lipase gene family JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 9647-9651 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by T.G.Kirchgessner, 27-OCT-1989. FEATURES from to/span description pre-msg 731 > 801 LPL mRNA and introns /nomgen="LPL" /map="8p22" /hgml_locus_uid="LN0071P" signal 666 670 CCAAT box signal 704 710 TATA box BASE COUNT 214 a 177 c 174 g 236 t ORIGIN 1 aaatggaatc atacaatatg tgtcttttgc gactatcttc tttcacttat cataactcaa 61 tacggcttta gattatttga cctcgatgtt ctgcctctga acataaaata ttatccttgc 121 attccttgat gagtttgagg attgagaata atttgcatga gacaaaaatt agaaactagt 181 tagagcaagt aggcttttct ccatcacata agctgatcca tcttgccaat gttaaaacac 241 cagattgtac aagcacaagc tgggacgcaa tgtgtgtccc tctatcccta cattgacttt 301 gcgggggtgg ggatggggtg cggggtgagt gagggaggac tgcaagtgac aaacaggatt 361 cgtcaaaaga gaggtgtatt aaagtgccga tcaaatgtaa tttaacagct aaactttccc 421 tccttggaaa acaggtgatt gttgagtatt taacgtgaat cgatgtaaac ctgtgtttgg 481 tgcttagaca gggggccccc gggtagagtg gaacccctta agctaagcga acaggagcct 541 aacaaagcaa atttttccgt ctgccctttc cccctcttct cgttggcagg gttgatcctc 601 attactgttt gctcaaacgt ttagaagtga atttaggtcc ctccccccaa cttatgattt 661 tatagccaat aggtgatgag gtttatttgc atatttccag tcacataagc agccttggcg 721 tgaaaacagt gtcagactcg attccccctc ttcctcctcc tcaagggaaa gctgcccact 781 ctagctgccc tgccatcctt t // LOCUS MUSINSRE 1240 bp ds-DNA ROD 02-NOV-1989 DEFINITION Mouse insulin receptor (mIR) gene, exon 1 and 5' flank. ACCESSION M28869 KEYWORDS insulin receptor. SOURCE Mouse cell line 3T3-L1 DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1240) AUTHORS Sibley,E., Kastelic,T., Kelly,T.J. and Lane,M.D. TITLE Characterization of the mouse insulin receptor gene promoter JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 9732-9736 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.D.Lane, 01-NOV-1989. FEATURES from to/span description pept 1131 / 1230 insulin receptor, exon 1 pre-msg 707 > 1240 mIR mRNA and introns IVS 1231 > 1240 mIR, intron A BASE COUNT 216 a 339 c 415 g 270 t ORIGIN 1 ccacgggagt caaaaaaata gtaaaaagga gtaaagaaag acaaaatgtg cttggttgaa 61 tctggcatct agggcatatt ggggtgttta tgtcctgggg tatctggcgg catttccaga 121 tgctccagac ctttaaattg gaacctcggt gttacttgtg tttgctgcag tcaggagggg 181 acctgggggc gtccctaggc ttttaaactg gaacctcagg cctgtttagt ggttttcgag 241 tcaggcgggg atctggggac ccctaggttt taaaatcgga actttgggac tctttggggg 301 cgttcgtgtc aggtgcggat atgggcagct ccggacgttt gacaggtgag tcttagagtt 361 gtttgggtgt ttatgttaca ctggtatctg agaacgctta caagctttta aatcgtaatc 421 tttctaagcc agcagttcgg ggtgttggga ttggaagaat ctgaagtgag cctcgggtct 481 ctgaagttgc gggttttacg gggcaagggg gaaaggggcc gaggaggcga ggaggcgagg 541 aggcgtggcg ttgccagctc tggccacgcc tccccgagct ctgctggctt tctccccctc 601 cccccccagc gggcctcact ggagcgcaca gtcccttccc tgtcttaatc cgcgccacct 661 tttcccttgg cccgcgcggg cccagctgac gggctgcgtt gtttacgggc tggagtcgag 721 ccctagctcc cgccgccacc accagcccag gtgccctcca gtgcgcgcgt ccctctgtct 781 cagactccac acaacgcgac ccacccagag ctgcacggag ggcagaagca ggagacccgg 841 acaggagacg caccgcggtg agctctggac tctgggattg cgggcacggg accgggcctg 901 ggtgacctgc gggccgcgcc acggtgttgc ttgcggccga ggcctctgtg ctcttcccgg 961 gactgtcccc agggccctct aggctggaga gctgcggcct gtgagccacg ggcgtggaag 1021 agaaggacgt gcggccccga gcgcctctcc agagaccttc tcacggagta tgtccccagt 1081 aggccggcgt ggcgtgctct gatcgccggg gtcccagcac tcctactgct atgggcttcg 1141 ggagaggatg tgagacgacg gctgtgccat tgctggtggc cgtggccgcg ttgctggtgg 1201 gcacagccgg ccacctgtac cctggagagg gtaagtctgg // LOCUS PPH18A 912 bp ds-DNA VRL 15-DEC-1989 DEFINITION Human papillomavirus type 18 encoding envelope proteins E6 and E7, complete cds., and envelope protein E1, 5' end. ACCESSION M26798 KEYWORDS E1 protein; E6 protein; E7 protein; envelope protein. SOURCE Human papillomavirus type 18, cDNA to mRNA, from human cervical carcinoma HeLa, C4-1 and SW756 cell lines. ORGANISM Human papillomavirus Viridae; ds-DNA nonenveloped viruses; Papovaviridae; Papillomavirus. REFERENCE 1 (bases 1 to 912) AUTHORS Schneider-Gaedicke,A. and Schwarz,E. TITLE Different human cervical carcinoma cell lines show similar transcription patterns of human papillomavirus type 18 early genes JOURNAL EMBO J. 5, 2285-2292 (1986) STANDARD simple staff_review FEATURES from to/span description pept 12 488 ORF E6 pept 497 814 ORF E7 pept 821 > 912 ORF E1 BASE COUNT 302 a 184 c 205 g 221 t ORIGIN 1 accacaatac catggcgcgc tttgaggatc caacacggcg accctacaag ctacctgatc 61 tgtgcacgga actgagcact tcactgcaag acatagaaat aacctgtgta tattgcaaga 121 cagtattgga acttacagag gtatttgaat ttgcatttaa agatttattt gtggtgtata 181 gagacagtat accgcatgct gcatgccata aatgtataga tttttattct agaattagag 241 aattaagaca ttattcagac tctgtgtatg gagacacatt ggaaaaacta actaacactg 301 ggttatacaa tttattaata aggtgcctgc ggtgccagaa accgttgaat ccagcagaaa 361 aacttagaca ccttaatgaa aaacgacgat ttcacaacat agctgggcac tatagaggcc 421 agtgccattc gtgctgcaac cgagcacgac aggaaagact ccaacgacgc agagaaacac 481 aagtataata ttaagtatgc atggacctaa ggcaacattg caagacattg tattgcattt 541 agagccccaa aatgaaattc cggttgacct tctatgtcac gagcaattaa gcgactcaga 601 ggaagaaaac gatgaaatag atggagttaa tcatcaacat ttaccagccc gacgagctga 661 accacaacgt cacacaatgt tgtgtatgtg ttgtaagtgt gaagccagaa ttaagctagt 721 agtagaaagc tcagcagacg accttcgagc attccagcag ctgtttctga acaccctgtc 781 ctttgtgtgt ccgtggtgtg catcccagca gtaagcaaca atggctgatc cagaaggtac 841 agacggggag ggcacgggtt gtaacggctg gttttatgta caagctattg tagacaaaaa 901 aacaggagat gt //