Path: utzoo!attcan!uunet!jarthur!brutus.cs.uiuc.edu!apple!bionet!daemon From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: <9004061844.AA06790@life.lanl.gov.LANL.GOV> Date: 6 Apr 90 18:44:00 GMT Sender: daemon@genbank.BIO.NET Distribution: bionet Lines: 68 Approved: lear@genbank.bio.net Checksum: 31194 4 LOCUS HUMJNLTRA 765 bp ss-mRNA PRI 22-FEB-1990 DEFINITION Human DNA/endogenous retroviral long terminal repeat (LTR) junction mRNA, clone lambda-LTR8. ACCESSION M32219 KEYWORDS Alu repetitive sequence; long terminal repeat. SOURCE Human lung cancer cell line, cDNA to mRNA, clone lambda-LTR8. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 765) AUTHORS Tomita,N., Horii,A., Doi,S., Yokouchi,H., Ogawa,M., Mori,T. and Matsubara,K. TITLE Transcription of human endogenous retroviral long terminal repeat (LTR) sequence in a lung cancer cell line JOURNAL Biochem. Biophys. Res. Commun. 166, 1-10 (1990) STANDARD simple staff_review FEATURES from to/span description recomb 223 224 human DNA end; endogenous retrovirus DNA start rpt 224 342 Alu repeat LTR 343 765 long terminal repeat BASE COUNT 252 a 158 c 148 g 207 t ORIGIN 1 ggaaccccaa ccttacatgt aatacaaact taactcaaaa tggatcatat atctaaatgt 61 aaaatggaaa gctataaaac tgaaaacaga ctatctttac aacctaggcg taggtatagt 121 ttttagacat tacaccaaaa gcacatgccg taaaagaaaa aatagataaa ttggtggatt 181 tcattaaaat taaaaaactt tttctctctg aaaaatcctg ttaagctggg cgctgtggtt 241 catgcctgta atcccagcac tttgggaggc tgagttggga agaaattaat agcttgaggc 301 caggagttca agatcatcct gggcagcaaa gtcatacact cttgagggaa gagagagacc 361 ttctcatatt gttttatatt gttttatact cagtacctgt tttaagaaaa aaacaaggaa 421 gtgaaatcaa agacaggcag cccggcacca ggcctgaaac cagccctggg cctgcctggc 481 ctaaacctag tagttaaaaa tcaacttacg acttagaacc tgatgttatc cgtagattcc 541 aagcattgta taaaaaaatt gtgaaactcc ctgttgtgtt ctgtaccagt gcatgaaacc 601 cctgtcacat atcccctaga ttgctcaatc aatcacgacc ctttcatgtg aaatctttag 661 tgttgtgagc ccttaaaagg gacagaaatt gtgcacttga ggagctcaga ttttaaggct 721 gtagcttgcc gatgctccca gctgaataaa gcccttcctt ctaca // LOCUS HUMJNLTRB 551 bp ss-mRNA PRI 22-FEB-1990 DEFINITION Human DNA/endogenous retroviral long terminal repeat (LTR) junction mRNA, clone lambda-LTR22. ACCESSION M32220 KEYWORDS long terminal repeat. SOURCE Human lung cancer cell line, cDNA to mRNA, clone lambda-LTR22. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 551) AUTHORS Tomita,N., Horii,A., Doi,S., Yokouchi,H., Ogawa,M., Mori,T. and Matsubara,K. TITLE Transcription of human endogenous retroviral long terminal repeat (LTR) sequence in a lung cancer cell line JOURNAL Biochem. Biophys. Res. Commun. 166, 1-10 (1990) STANDARD simple staff_review FEATURES from to/span description recomb 120 121 human DNA end; endogenous retrovirus DNA start LTR 121 551 long terminal repeat BASE COUNT 146 a 146 c 129 g 130 t ORIGIN 1 ggcttgagct gcagtcacag gccttggctg gaccagggat ggcccccagc tcccaggagg 61 gcccactgac cctgcagctc cagccttctc catacttcaa caaagaatga gttgtggcaa 121 tgagggaaga gagaccctct catagtgttt tatactcagt acctgtttta agaaaaaaca 181 acaaggaagt aaaaccaaag acaggcaggc agcctggcgc taggcccgaa accaggcctg 241 cgcctgcctg gcctaaaccc agtagttgaa aatcaattca taacttagaa accgatgtta 301 ttcatagatt ccagacattg tatagaagaa catttgtgaa actccctgcc gtgttctgtt 361 tctctctgac cgccggtgca tgcagcgcct gtcacgtacc gcctgcttgc tcaaatcaat 421 gacgaccctt tcatgtgaaa tcttcgtgtt gtgagccctt aaaagggaca gaaattgtgc 481 acttggggag ctcggatttt aaggcagtag cttgccgatg ctcccagctg aataaagccc 541 ttccttctac a //