Path: utzoo!attcan!uunet!cs.utexas.edu!usc!apple!bionet!daemon From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: <9004101953.AA11353@haploid.lanl.gov.LANL.GOV> Date: 10 Apr 90 19:53:14 GMT Sender: daemon@genbank.BIO.NET Distribution: bionet Lines: 415 Approved: lear@genbank.bio.net Checksum: 47074 25 LOCUS CATL11AA 424 bp ds-DNA MAM 28-FEB-1990 DEFINITION Cat LINE-1 DNA sequence region 1. ACCESSION M32251 KEYWORDS L1 repetitive sequence; repetitive sequence. SOURCE Cat DNA. ORGANISM Felis catus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Carnivora; Feliforma; Felidae. REFERENCE 1 (bases 1 to 424) AUTHORS Fanning,T. and Singer,S. TITLE The LINE-1 DNA sequences in four mammalian orders predict proteins that conserve homologies to retrovirus proteins JOURNAL Nucleic Acids Res. 15, 2251-2260 (1987) STANDARD simple staff_entry FEATURES from to/span description rpt 1 424 L1 repetitive element BASE COUNT 182 a 71 c 61 g 110 t ORIGIN 1 caaggatttt tcaatacaaa aagcaatatc agtgtaagat accatattaa cagaatgaag 61 ggaaaaaacc cacatcatta tctcaactga tacagaaaaa gcatttgaca acattcaata 121 ccctttcatg ataaaaacat tgtgaaaact agggatagaa gaaattacct tcattgaata 181 aaagccatat atgaaaaacc cacaagtaat atcatattca atggtaaaag actaaaatct 241 tttcctctaa atcaggaaaa ggcaaggatg cctactttca ccacttctat tcaatgtgta 301 ctggaaattc tagctagagc aattaggcaa gaaaaagaaa ggcatccaaa ttgaaaagga 361 tgaagtaaaa ttattcctat ttgcagttga tatgatctta tacatagaaa accctaaaga 421 ttac // LOCUS CATL12AA 377 bp ds-DNA MAM 28-FEB-1990 DEFINITION Cat LINE-1 DNA sequence region 2. ACCESSION M32252 KEYWORDS L1 repetitive sequence; repetitive sequence. SOURCE Cat DNA. ORGANISM Felis catus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Carnivora; Feliforma; Felidae. REFERENCE 1 (bases 1 to 377) AUTHORS Fanning,T. and Singer,S. TITLE The LINE-1 DNA sequences in four mammalian orders predict proteins that conserve homologies to retrovirus proteins JOURNAL Nucleic Acids Res. 15, 2251-2260 (1987) STANDARD simple staff_entry FEATURES from to/span description rpt 1 377 L1 repetitive element BASE COUNT 146 a 81 c 85 g 65 t ORIGIN 1 gcaatgacac atcggacaaa gggctagtat ccaaaacctg taaagaactc accaaactcc 61 acacccaaaa aacaaataat ccagtgaaga aatgggcaga agacatgaat agacactttc 121 ctaaacaaga ccagatggtc aacaggcaca tgaaaagatg ctcaacgtca ctccccatga 181 gggagataca aatcaaaacc acaatgagat atcacctcac accagtcaga gtggctaaaa 241 tgagaaaatc aggagatgct gatgctggag aggatgtgga gaaacgggaa ccctcttgca 301 ctgttggtgg gaatgcaagc aaactggtgc agctgctctg gaaaacagtg tggaggttcc 361 tcagaaaatt aaaaata // LOCUS HUMCOL4A6 1056 bp ss-mRNA PRI 09-MAR-1990 DEFINITION Human collagen type IV mRNA. ACCESSION M33653 KEYWORDS alternative splicing; collagen type IV. SOURCE Human tumor cell line HT-1080, cDNA to mRNA, clones HT-[125,133]. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1056) AUTHORS Pihlajaniemi,T., Myllylae,R., Seyer,J., Kurkinen,M. and Prockop,D.J. TITLE Partial characterization of a low molecular weight human collagen that undergoes alternative splicing JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84, 940-944 (1987) STANDARD simple staff_entry FEATURES from to/span description pept < 1 740 collagen type IV /hgml_locus_uid="LJ0118J" /map="13q34" /nomgen="COL4A2" BASE COUNT 277 a 228 c 333 g 218 t ORIGIN 1 agatccggac gctggccttg atggggcctc ttggtcttct tgggcaaatt ggcccacttg 61 gagctctagg gatgctaggc cagaaggggg agattggact gctaggccct ctaggacacg 121 atgggaaagg acctcgcggt aaactaggag acatgggccc tcttggtccc caaggccccc 181 taggaaagga tggacctcca ggagtgaagg gagaaaacgg gcacccaggg agcccaggag 241 agaaggggga aaaaggggag acaggacaag caggctcacc ggttcctggg ctgctagggc 301 cagaggggcc tcccggacct ccggggctcc aaggtgttcc tggaccaaag ggggaagcag 361 gactagacgg agcaaaagga gagaaaggct tccagggaga aaaaggagac cgtggtcccc 421 tgggactacc cggagcttca ggtttggacg gcaggcctgg gccaccgggt actccaggac 481 caattggagt tccaggccca gcgggaccaa agggcgagag gggcagcaaa ggagaccctg 541 ggatgacagg accaacggga gcagctgggc ttcctggttt acatggacca cccggggaca 601 agggaaaccg gggggagagg gggaagaaag gctctagagg gcctaaaggg gacaagggag 661 accaaggagc gcctggatta gatgccccct gcccattggg gcaagatggc ttaccagtcc 721 aaggctgctg gaacaagtga tgcctctaac cttggattgg cctgtgtgtg tgtttgtaca 781 tagaatattt atttttatac agttttcact ttttgaaaat gccagaagta tgatgcatct 841 tacagattat taaaaaagaa agaaaaaccg ttgcatattt tgtacagaaa atatcaacct 901 cttccctttt gtttacaaga tgttttgtat aagcctatgt ctctaataca ttttttgttt 961 ggtcgtaatg tctgcatgat atttgtgcac atttattaag tatcgaaggt taataaattg 1021 ttgtgtcctg gtgccaaggg gggccagcca gaactg // LOCUS HUMCOL4A7 629 bp ss-mRNA PRI 09-MAR-1990 DEFINITION Human collagen type IV mRNA. ACCESSION M15524 KEYWORDS alternative splicing; collagen type IV. SOURCE Human tumor cell line HT-1080, cDNA to mRNA, clone HT-127. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 629) AUTHORS Pihlajaniemi,T., Myllylae,R., Seyer,J., Kurkinen,M. and Prockop,D.J. TITLE Partial characterization of a low molecular weight human collagen that undergoes alternative splicing JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84, 940-944 (1987) STANDARD simple staff_entry FEATURES from to/span description pept < 1 403 collagen type IV (AA at 2) /hgml_locus_uid="LJ0118J" /map="13q34" /nomgen="COL4A2" BASE COUNT 175 a 131 c 185 g 138 t ORIGIN 1 agaggggcct cccggacctc cggggctcca aggtgttcct ggaccaaagg gggaagcagg 61 actagacgga gcaaaaggag agaaaggctt ccagggagaa aaaggagacc gtggtcccct 121 gggactaccc ggtactccag gaccaattgg agttccaggc ccagcgggac caaagggcga 181 gaggggcagc aaaggagacc ctgggatgac aggaccaacg ggagcagctg ggcttcctgg 241 tttacatgga ccacccgggg acaagggaaa ccggggggag agggggaaga aaggctctag 301 agggcctaaa ggggacaagg gagaccaagg agcgcctgga ttagatgccc cctgcccatt 361 ggggcaagat ggcttaccag tccaaggctg ctggaacaag tgatgcctct aaccttggat 421 tggcctgtgt gtgtgtttgt acatagaata tttattttta tacagttttc actttttgaa 481 aatgccagaa gtatgatgca tcttacagat tattaaaaaa gaaagaaaaa ccgttgcata 541 ttttgtacag aaaatatcaa cctcttccct tttgtttaca agatgttttg tataagccta 601 tgtctctaat acattttttg tttggtcgt // LOCUS HUMRB1RA 4600 bp ss-mRNA PRI 09-APR-1990 DEFINITION Human retinoblastoma associated (RB1) mRNA. ACCESSION M33647 J02994 KEYWORDS retinoblastoma protein. SOURCE Human retinoblast cDNA to mRNA, clone p4.7R. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 4600) AUTHORS Friend,S.H., Horowitz,J.M., Gerber,M.R., Wang,X.-F., Bogenmann,E., Li,F.P. and Weinberg,R.A. TITLE Deletions of a DNA sequence in retinoblastomas and mesenchymal tumors: Organization of the sequence and its encoded protein JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84, 9059-9063 (1987) STANDARD full staff_entry COMMENT Draft entry and computer-readable copy of sequence for [1] kindly provided by S.H.Friend, 10-FEB-1988. FEATURES from to/span description pept 4 2790 retinoblastoma-associated protein /hgml_locus_uid="LE0159J" /map="13q14.2" /nomgen="RB1" BASE COUNT 1489 a 842 c 815 g 1454 t ORIGIN 1 gtcatgccgc ccaaaacccc ccgaaaaacg gccgccaccg ccgccgctgc cgccgcggaa 61 cccccggcac cgccgccgcc gccccctcct gaggaggacc cagagcagga cagcggcccg 121 gaggacctgc ctctcgtcag gcttgagttt gaagaaacag aagaacctga ttttactgca 181 ttatgtcaga aattaaagat accagatcat gtcagagaga gagcttggtt aacttgggag 241 aaagtttcat ctgtggatgg agtattggga ggttatattc aaaagaaaaa ggaactgtgg 301 ggaatctgta tctttattgc agcagttgac ctagatgaga tgtcgttcac ttttactgag 361 ctacagaaaa acatagaaat cagtgtccat aaattcttta acttactaaa agaaattgat 421 accagtacca aagttgataa tgctatgtca agactgttga agaagtatga tgtattgttt 481 gcactcttca gcaaattgga aaggacatgt gaacttatat atttgacaca acccagcagt 541 tcgatatcta ctgaaataaa ttctgcattg gtgctaaaag tttcttggat cacattttta 601 ttagctaaag gggaagtatt acaaatggaa gatgatctgg tgatttcatt tcagttaatg 661 ctatgtgtcc ttgactattt tattaaactc tcacctccca tgttgctcaa agaaccatat 721 aaaacagctg ttatacccat taatggttca cctcgaacac ccaggcgagg tcagaacagg 781 agtgcacgga tagcaaaaca actagaaaat gatacaagaa ttattgaagt tctctgtaaa 841 gaacatgaat gtaatataga tgaggtgaaa aatgtttatt tcaaaaattt tatacctttt 901 atgaattctc ttggacttgt aacatctaat ggacttccag aggttgaaaa tctttctaaa 961 cgatacgaag aaatttatct taaaaataaa gatctagatg caagattatt tttggatcat 1021 gataaaactc ttcagactga ttctatagac agttttgaaa cacagagaac accacgaaaa 1081 agtaaccttg atgaagaggt gaatgtaatt cctccacaca ctccagttag gactgttatg 1141 aacactatcc aacaattaat gatgatttta aattcagcaa gtgatcaacc ttcagaaaat 1201 ctgatttcct attttaacaa ctgcacagtg aatccaaaag aaagtatact gaaaagagtg 1261 aaggatatag gatacatctt taaagagaaa tttgctaaag ctgtgggaca gggttgtgtc 1321 gaaattggat cacagcgata caaacttgga gttcgcttgt attaccgagt aatggaatcc 1381 atgcttaaat cagaagaaga acgattatcc attcaaaatt ttagcaaact tctgaatgac 1441 aacatttttc atatgtcttt attggcgtgc gctcttgagg ttgtaatggc cacatatagc 1501 agaagtacat ctcagaatct tgattctgga acagatttgt ctttcccatg gattctgaat 1561 gtgcttaatt taaaagcctt tgatttttac aaagtgatcg aaagttttat caaagcagaa 1621 ggcaacttga caagagaaat gataaaacat ttagaacgat gtgaacatcg aatcatggaa 1681 tcccttgcat ggctctcaga ttcaccttta tttgatctta ttaaacaatc aaaggaccga 1741 gaaggaccaa ctgatcacct tgaatctgct tgtcctctta atcttcctct ccagaataat 1801 cacactgcag cagatatgta tctttctcct gtaagatctc caaagaaaaa aggttcaact 1861 acgcgtgtaa attctactgc aaatgcagag acacaagcaa cctcagcctt ccagacccag 1921 aagccattga aatctacctc tctttcactg ttttataaaa aagtgtatcg gctagcctat 1981 ctccggctaa atacactttg tgaacgcctt ctgtctgagc acccagaatt agaacatatc 2041 atctggaccc ttttccagca caccctgcag aatgagtatg aactcatgag agacaggcat 2101 ttggaccaaa ttatgatgtg ttccatgtat ggcatatgca aagtgaagaa tatagacctt 2161 aaattcaaaa tcattgtaac agcatacaag gatcttcctc atgctgttca ggagacattc 2221 aaacgtgttt tgatcaaaga agaggagtat gattctatta tagtattcta taactcggtc 2281 ttcatgcaga gactgaaaac aaatattttg cagtatgctt ccaccaggcc ccctaccttg 2341 tcaccaatac ctcacattcc tcgaagccct tacaagtttc ctagttcacc cttacggatt 2401 cctggaggga acatctatat ttcacccctg aagagtccat ataaaatttc agaaggtctg 2461 ccaacaccaa caaaaatgac tccaagatca agaatcttag tatcaattgg tgaatcattc 2521 gggacttctg agaagttcca gaaaataaat cagatggtat gtaacagcga ccgtgtgctc 2581 aaaagaagtg ctgaaggaag caaccctcct aaaccactga aaaaactacg ctttgatatt 2641 gaaggatcag atgaagcaga tggaagtaaa catctcccag gagagtccaa atttcagcag 2701 aaactggcag aaatgacttc tactcgaaca cgaatgcaaa agcagaaaat gaatgatagc 2761 atggatacct caaacaagga agagaaatga ggatctcagg accttggtgg acactgtgta 2821 cacctctgga ttcattgtct ctcacagatg tgactgtata actttcccag gttctgttta 2881 tggccacatt taatatcttc agctcttttt gtggatataa aatgtgcaga tgcaattgtt 2941 tgggtgattc ctaagccact tgaaatgtta gtcattgtta tttatacaag attgaaaatc 3001 ttgtgtaaat cctgccattt aaaaagttgt agcagattgt ttcctcttcc aaagtaaaat 3061 tgctgtgctt tatggatagt aagaatggcc ctagagtggg agtcctgata acccaggcct 3121 gtctgactac tttgccttct tttgtagcat ataggtgatg tttgctcttg tttttattaa 3181 tttatatgta tattttttta atttaacatg aacaccctta gaaaatgtgt cctatctatc 3241 ttccaaatgc aatttgattg actgcccatt caccaaaatt atcctgaact cttctgcaaa 3301 aatggatatt attagaaatt agaaaaaaat tactaatttt acacattaga ttttatttta 3361 ctattggaat ctgatatact gtgtgcttgt tttataaaat tttgctttta attaaataaa 3421 agctggaagc aaagtataac catatgatac tatcatacta ctgaaacaga tttcatacct 3481 cagaatgtaa aagaacttac tgattatttt cttcatccaa cttatgtttt taaatgagga 3541 ttattgatag tactcttggt ttttatacca ttcagatcac tgaatttata aagtacccat 3601 ctagtacttg aaaaagtaaa gtgttctgcc agatcttagg tatagaggac cctaacacag 3661 tatatcccaa gtgcactttc taatgtttct gggtcctgaa gaattaagat acaaattaat 3721 tttactccat aaacagactg ttaattatag gagccttaat ttttttttca tagagatttg 3781 tctaattgca tctcaaaatt attctgccct ccttaatttg ggaaggtttg tgttttctct 3841 ggaatggtac atgtcttcca tgtatctttt gaactggcaa ttgtctattt atcttttatt 3901 tttttaagtc agtatggtct aacactggca tgttcaaagc cacattattt ctagtccaaa 3961 attacaagta atcaagggtc attatgggtt aggcattaat gtttctatct gattttgtgc 4021 aaaagcttca aattaaaaca gctgcattag aaaaagaggc gcttctcccc tcccctacac 4081 ctaaaggtgt atttaaacta tcttgtgtga ttaacttatt tagagatgct gtaacttaaa 4141 ataggggata tttaaggtag cttcagctag cttttaggaa aatcactttg tctaactcag 4201 aattattttt aaaaagaaat ctggtcttgt tagaaaacaa aattttattt tgtgctcatt 4261 taagtttcaa acttactatt ttgacagtta ttttgataac aatgacacta gaaaacttga 4321 ctccatttca tcattgtttc tgcatgaata tcatacaaat cagttagttt ttaggtcaag 4381 ggcttactat ttctgggtct tttgctacta agttcacatt agaattagtg ccagaatttt 4441 aggaacttca gagatcgtgt attgagattt cttaaataat gcttcagata ttattgcttt 4501 attgcttttt tgtattggtt aaaactgtac atttaaaatt gctatgttac tattttctac 4561 aattaatagt ttgtctattt taaaataaat tagttgttag // LOCUS MV1MOBPA 2436 bp ds-DNA BCT 15-DEC-1989 DEFINITION Plasmid pMV158 mobilization protein gene. ACCESSION M28538 KEYWORDS mobilization. SOURCE Plasmid pMV158 from Streptococcus agalactiae, DNA. ORGANISM Plasmid pMV158 Prokaryota; Bacteria. REFERENCE 1 (bases 1 to 2436) AUTHORS Priebe,S.D. and Lacks,S.A. TITLE Region of the streptococcal plasmid pMV158 required for conjugative mobilization JOURNAL J. Bacteriol. 171, 4778-4784 (1989) STANDARD full staff_entry COMMENT Draft entry and computer-readable copy of sequence for [1] kindly provided by S.A.Lacks, 18-JAN-1990. FEATURES from to/span description pept 628 2112 mobilization peptide BASE COUNT 824 a 393 c 565 g 654 t ORIGIN 1 agggatttct aaatcgttaa gggatcaact ttgggagaga gttcaaaatt gatccttttt 61 ttataacagg aattcaaatc tttttgttcc attaaagggc gcgattgctg aataaaagat 121 acgagagacc tctcttgtat cttttttatt ttgagtggtt ttgtccgtta cactagaaaa 181 ccgaaagaca ataaaaattt tattcttgct gagtctggct ttcggtaagc tagacaaaac 241 ggacaaaata aaaatcagca agggacaggt agtatttttt gagtgatctt ctcaaaaaat 301 actacctgtc ccttgctgat ttttaaacga gcacgagagc aaaacccccc tttgctgagg 361 tggcagaggg caggtttttt tgtttctttt ttctcgtaaa aaaaagaaag gtcttaaagg 421 ttttatggtt ttggtcggca ctgccgacag cctcgcagag cacacacttt atgaatataa 481 agtatagtgt gttatacttt acatggaagt tataccgaaa ttgtgctaaa ctaccagtta 541 agatgttgct gattaagacg agcaatagac tgtgtcggct cgtctgtctt tcggtaatcg 601 aaagacaagt cttaaggagg gaaatctatg agttacatgg ttgcaagaat gcagaagatg 661 aaagctggca atttgggagg agcttttaag cataatgaac gtgtttttga gacgcactca 721 aataaagata taaacccgag caggtcacac ctcaactacg agttgacgga tcgtgaccgc 781 tcggtgtcgt atgaaaagca gattaaagac tatgtgaacg aaaataaggt ttctaatcga 841 gcaatccgaa aagatgcagt tctatgtgat gagtggatta tcacatctga taaagatttt 901 tttgaaaagt tggatgagga acagacgaga acgttttttg aaacggctaa aaattatttt 961 gcagagaact atggcgagtc aaatattgct tatgcgagtg ttcacttgga tgaaagcacc 1021 cctcacatgc acatgggagt agtacctttt gagaacggta aattgtcatc aaaagcaatg 1081 tttgaccgtg aggagctaaa acatatccaa gaggacttgc ctagatacat gagcgaccac 1141 ggttttgagt tggaacgtgg caagctgaat agtgaagcta agcataagac tgtagctgaa 1201 ttcaagaggg caatggctga tatggaactc aaagaggaac ttcttgaaaa atatcatgca 1261 ccgctttttg ttgatgagag aacaggcgag ttgaacaatg acacggaagc tttttggcat 1321 gaaaaagagt ttgctgatat gtttgaagtt caatctccga tacgtgaaac aactaaccaa 1381 gaaaaaatgg actggttaag aaaacagtac caagaagagc tgaaaaaact agaatcgtct 1441 aaaaagcccc tagaagacga tttaagccat ttagaagagt tgcttgataa aaagaccaag 1501 gaatatatta aaatcgattc tgaggcctct gagagggcct cagagctatc taaagccgag 1561 ggatatataa ataccctaga aaatcattcg aagagcttag aagcgaaaat agagtgttta 1621 gagagtgata atctacaatt ggaaaaacaa aaggcgacaa aactcgaagc gaaagcgttg 1681 aacgagagtg agttgcgaga actaaagcct aagaagaatt ttctaggaaa agagcattat 1741 gagttaagtc ctgaacaatt tgaagggttg aaggcagaag tttatcgtag tagaactcta 1801 ttgcaccaca aagatattga actggagcaa gcaaaacgtc aagtatctct gagagcctct 1861 aaaaactatt ttacagctag tttagagcga gctaaggaaa aagctaaagg tgagagtata 1921 gaccgtctta aaagcgaaat aaagcgacta aaaaacgaaa attcaatttt acgtcagcaa 1981 aatgacaaga tgctagggaa attaagagag ttaatgcctg ataaagcctt taagaatttg 2041 ttatcagaac ttaaggcgat taagccaatc gtgaatataa ttaaaaaggc tattgaaaag 2101 agcttgttct gagcgattta tgccgtgaaa gctatttgac aataagcagt gacagagtac 2161 gctaggacgt gccgagccga aaggctttag cgtttcggac ggacacggac aaaggacggc 2221 agtcactggt tacttgttgt caaatagacc atggaataaa aagcgtcaaa agtcttgagt 2281 ggatgatacc ctatggtact ctattcgcct tttgactttt ttgctataat ttaagtgtcg 2341 ccagttcttc cgtcaggtaa tgcgaactta gactggaggt gagcgttgtg aagacattcc 2401 tcgagcttgt ctttgtccct tttgtggttg gcgttg // LOCUS RATIGFI1 958 bp ss-mRNA ROD 15-JUN-1988 DEFINITION Rat mRNA (clone IGF1AB1) for insulin-like growth factor I. ACCESSION X06107 Y00429 M32260 KEYWORDS insulin-like growth factor I. SOURCE rat (Rattus norvegicus). ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 958; enum. 1 to 958) AUTHORS Rotwein,P. JOURNAL Unpublished (1987) Washington U, Sch of Med, St. Louis, MO, USA. STANDARD simple automatic REFERENCE 2 (bases 1 to 958) AUTHORS Shimatsu,A. and Rotwein,P. TITLE Sequence of Two Rat Insulin-like Growth Factor I mRNAs Differing Within the 5' Untranslated Region JOURNAL Nucleic Acids Res. 15, 7196-7196 (1987) STANDARD simple automatic COMMENT Another IGF-I mRNA of rat liver differing in the 5' UT-region is described in $$ *source: tissue=liver; strain=Sprague-Dawley; EMBL features not translated to GenBank features: key from to description SITE 1 258 5' UT-region SITE 736 958 3' UT-region FEATURES from to/span description pept 259 738 IGF-I (AA 1-159) BASE COUNT 260 a 246 c 209 g 243 t ORIGIN 1 cgaatgttcc cccagctgtt tcctgtctac agtgtctgtg ttttgtagat aaatgtgagg 61 attttctcta aatccctctt ctgcttgcta aatctcactg tcgctgctaa attcagacca 121 gatagagcct gcgcaatcga aataaagtcc tcaaaattga aatgtgactt tgctctaaca 181 tctcccatct ctctggattc tttttgcctc attattcctg cccaccaatt catttccaga 241 ctttgtactt cagaagcgat ggggaaaatc agcagtcttc caactcaatt atttaagatc 301 tgcctctgtg acttcttgaa gataaagata cacatcatgt cgtcttcaca tctcttctac 361 ctggcactct gcttgctcac ctttaccagc tcggccacag ccggaccaga gaccctttgc 421 ggggctgagc tggtggacgc tcttcagttc gtgtgtggac caaggggctt ttacttcaac 481 aagcccacag gctatggctc cagcattcgg agggcaccac agacgggcat tgtggatgag 541 tgttgcttcc ggagctgtga tctgaggagg ctggagatgt actgtgctcc gctgaagcct 601 acaaagtcag ctcgttccat ccgggcccag cgccacactg acatgcccaa gactcagaag 661 tcccagcccc tatcgacaca caagaaaagg aagctgcaaa ggagaaggaa aggaagtaca 721 cttgaagaac acaagtagag gaagtgcagg aaacaagacc tacagaatgt aggaggagcc 781 tcccgaggaa cagaaaatgc cacgtcaccg caagatcctt tgctgcttga gcaacctgca 841 aaacatcgga acacctgcca aatatcaata atgagttcaa taccatttca gagatgggca 901 tttccctcaa tgaaatacac aagtaaacat tccgacattg tctttaggag tgtttgtt // LOCUS RATIGFI2 798 bp ss-mRNA ROD 15-JUN-1988 DEFINITION Rat mRNA (clone IGF1AB2) for insulin-like growth factor I. ACCESSION X06108 Y00429 M32339 KEYWORDS insulin-like growth factor I. SOURCE rat (Rattus norvegicus). ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 798) AUTHORS Rotwein,P. JOURNAL Unpublished (1987) Washington U, Sch of Med, St. Louis, MO, USA. STANDARD simple automatic REFERENCE 2 (bases 1 to 798) AUTHORS Shimatsu,A. and Rotwein,P. TITLE Sequence of Two Rat Insulin-like Growth Factor I mRNAs Differing Within the 5' Untranslated Region JOURNAL Nucleic Acids Res. 15, 7196-7196 (1987) STANDARD simple automatic COMMENT Another IGF-I mRNA of rat liver differing in the 5' UT-region is described in $$.. *source: tissue=liver; strain=Sprague-Dawley; EMBL features not translated to GenBank features: key from to description SITE 1 72 5' UT-region SITE 553 798 3' UT-region FEATURES from to/span description pept 73 552 IGF-I (AA 1-159) BASE COUNT 238 a 196 c 183 g 181 t ORIGIN 1 gaatgttccc ccagctgttt cctgtctaca gtgtctgtgt tttgtagata aatactttgt 61 acttcagaag cgatggggaa aatcagcagt cttccaactc aattatttaa gatctgcctc 121 tgtgacttct tgaagataaa gatacacatc atgtcgtctt cacatctctt ctacctggca 181 ctctgcttgc tcacctttac cagctcggcc acagccggac cagagaccct ttgcggggct 241 gagctggtgg acgctcttca gttcgtgtgt ggaccaaggg gcttttactt caacaagccc 301 acaggctatg gctccagcat tcggagggca ccacagacgg gcattgtgga tgagtgttgc 361 ttccggagct gtgatctgag gaggctggag atgtactgtg ctccgctgaa gcctacaaag 421 tcagctcgtt ccatccgggc ccagcgccac actgacatgc ccaagactca gaagtcccag 481 cccctatcga cacacaagaa aaggaagctg caaaggagaa ggaaaggaag tacacttgaa 541 gaacacaagt agaggaagtg caggaaacaa gacctacaga atgtaggagg agcctcccga 601 ggaacagaaa atgccacgtc accgcaagat cctttgctgc ttgagcaacc tgcaaaacat 661 cggaacacct gccaaatatc aataatgagt tcaataccat ttcagagatg ggcatttccc 721 tcaatgaaat acacaagtaa acattccgac attgtcttta ggagtgtttg ttaaaaaaaa 781 aaaaaaaaaa acaaaaac // LOCUS VSVNJLA 590 bp ss-RNA VRL 14-MAR-1990 DEFINITION Vesicular stomatitis virus L gene. ACCESSION M17436 KEYWORDS L gene. SOURCE Vesicular stomatitis virus (New Jersey serotype; Ogden strain) cDNA to viral RNA. ORGANISM Vesicular stomatitis virus Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses; Rhabdoviridae; Vesiculovirus. REFERENCE 1 (bases 1 to 590) AUTHORS Luk,D., Masters,P.S., Gill,D.S. and Banerjee,A.K. TITLE Intergenic sequences of the vesicular stomatitis virus genome (New Jersey serotype): Evidence for two transcription initiation sites within the L gene JOURNAL Virology 160, 88-94 (1987) STANDARD simple staff_entry FEATURES from to/span description pept 66 > 590 L protein BASE COUNT 189 a 110 c 117 g 174 t ORIGIN 1 atggctcatt tccgttaata tatgaaaaaa actggaatag aagcataact ccaacaggaa 61 tcaaaatgga tttcgatcta atagaagatt ctgctaactg ggaagatgat gagtcggact 121 tttttttgcg agacattcta tctcaagaag atcagatgtc ttacttaaac accgcagact 181 ataatttgaa ttctccactc atttccgatg acatggttta tataattaaa agaatgaatc 241 acgaggaggt tccccccatt tggagatcta aggagtggga ttctcctctt gatatgctta 301 gaggttgtca agctcaaccc atgtctcacc aagagatgca caattggttt ggaacttgga 361 ttcaaaatgt tcagcatgat tccgcccaac ccttcacatt cttaaaagag gtggacaaag 421 agtcagaaat gacctatgac ttggtctcca cttttctgaa ggggtgggtg gggaaagatt 481 acccattcaa gtcaaagaac aaagaaattg atagtatggc attagtcggt cctctttgtc 541 aaaaattcct tgatttgcat aaaatcactc tgatattaaa tgcagtttct //