Path: utzoo!attcan!uunet!shelby!apple!bionet!daemon From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: <9004102125.AA01639@life.lanl.gov.LANL.GOV> Date: 10 Apr 90 21:25:18 GMT Sender: daemon@genbank.BIO.NET Distribution: bionet Lines: 121 Approved: lear@genbank.bio.net Checksum: 01130 8 LOCUS LEIKPCAA 234 bp ss-mRNA ORG 28-MAR-1990 DEFINITION L.tarentolae kinetoplast ATPase 6 edited mRNA, partial cds. ACCESSION M33229 KEYWORDS ATPase 6. SOURCE L.tarentolae kinetoplast (strain University of California) cDNA to mRNA. ORGANISM Kinetoplast Leishmania tarentolae Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Kinetoplastida; Trypanosomatina; Trypanosomatidae; Leishmania tarentolae. REFERENCE 1 (bases 1 to 234) AUTHORS Bhat,J.G., Koslowsky,D.J., Feagin,J.E., Smiley,B.L. and Kenneth,S. TITLE An extensively edited mitochondrial transcript in kinetoplastids encodes a protein homologous to ATPase subunit 6 JOURNAL Cell (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by J.G.Bhat 23-MAR-1990. Each uridine of the mRNA within the ranges specified ("t" in GenBank conventions) are the result of post-transcriptional editing. The "u addition"s and "u deletions" are alterations of the maxicircle DNA. FEATURES from to/span description pept 32 > 234 ATPase 6 site 33 48 post-transcriptional editing (u addition) site 52 64 post-transcriptional editing (u addition) site 70 77 post-transcriptional editing (u addition) site 28 29 post-transcriptional editing (u deletion) site 80 98 post-transcriptional editing (u addition) site 31 32 post-transcriptional editing (u deletion) site 108 127 post-transcriptional editing (u addition) site 130 136 post-transcriptional editing (u addition) site 139 212 post-transcriptional editing (u addition) site 66 67 post-transcriptional editing (u deletion) site 129 130 post-transcriptional editing (u deletion) BASE COUNT 58 a 7 c 35 g 134 t ORIGIN 1 tatataaaaa attatatcag attaagaaaa aatgtttgtt ttttttgttt gtgatttagt 61 aattatgcgt attttattat gtttttgtta tagtgtttga tccagaatta tttttgtgtt 121 attttataat gttttttata tttgtaccga gttaatgttt tgtatttttg atgtttattt 181 atttgttggt ttatgtatgt ttatttgttt atgattcgtg ttatttaatt ttta // LOCUS TRBKPEATA 828 bp ss-mRNA ORG 28-MAR-1990 DEFINITION T.brucei kinetoplast ATPase 6 edited mRNA, complete cds. ACCESSION M33228 KEYWORDS ATPase 6. SOURCE T.brucei kinetoplast (strain EATRO 164) procyclic Istar1 serodeme cell line [isolated from Bos Taurus blood], cDNA to mRNA. ORGANISM Kinetoplast Trypanosoma brucei Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Kinetoplastida; Trypanosomatina; Trypanosomatidae; Trypanosoma brucei. REFERENCE 1 (bases 1 to 828) AUTHORS Bhat,J.G., Koslowsky,D.J., Feagin,J.E., Smiley,B.L. and Kenneth,S. TITLE An extensively edited mitochondrial transcript in kinetoplastids encodes a protein homologous to ATPase subunit 6 JOURNAL Cell (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by J.G.Bhat 23-MAR-1990. Each uridine of the mRNA within the ranges specified ("t" in GenBank conventions) are the result of post-transcriptional editing. The "u addition"s and "u deletions" are alterations of the maxicircle DNA. FEATURES from to/span description pept 34 678 ATPase 6 site 33 59 post-transcriptional editing (u addition) site 67 132 post-transcriptional editing (u addition) site 135 170 post-transcriptional editing (u addition) site 172 173 post-transcriptional editing (u deletion) site 177 199 post-transcriptional editing (u addition) site 201 202 post-transcriptional editing (u deletion) site 205 245 post-transcriptional editing (u addition) site 253 256 post-transcriptional editing (u addition) site 258 259 post-transcriptional editing (u deletion) site 261 267 post-transcriptional editing (u addition) site 274 275 post-transcriptional editing (u deletion) site 276 278 post-transcriptional editing (u addition) site 280 281 post-transcriptional editing (u deletion) site 282 283 post-transcriptional editing (u addition) site 286 370 post-transcriptional editing (u addition) site 374 380 post-transcriptional editing (u addition) site 383 384 post-transcriptional editing (u deletion) site 384 402 post-transcriptional editing (u addition) site 407 408 post-transcriptional editing (u deletion) site 408 473 post-transcriptional editing (u addition) site 480 498 post-transcriptional editing (u addition) site 505 528 post-transcriptional editing (u addition) site 531 617 post-transcriptional editing (u addition) site 621 631 post-transcriptional editing (u addition) site 635 642 post-transcriptional editing (u addition) site 646 647 post-transcriptional editing (u addition) site 650 651 post-transcriptional editing (u deletion) site 654 657 post-transcriptional editing (u addition) site 660 661 post-transcriptional editing (u deletion) site 662 699 post-transcriptional editing (u addition) site 702 703 post-transcriptional editing (u deletion) site 703 775 post-transcriptional editing (u addition) site 776 777 post-transcriptional editing (u deletion) site 778 779 post-transcriptional editing (u addition) site 782 783 post-transcriptional editing (u addition) site 785 786 post-transcriptional editing (u deletion) BASE COUNT 156 a 21 c 137 g 514 t ORIGIN 1 aaaaataagt attttgatat tattaaagta aatatgtttt tatttttttt ttgtgattta 61 ttttggttgc gtttgttatt atgtatgtat tattgtgtat gatctaggtt atgttttatt 121 gtgtatttta attgtttaat gttgattttt gattttttat tattttgttt gtttgatttg 181 tatttgtttg ttggtttgtg tttgttttta ttgttgtggt ttatgttgtt taatttatat 241 agtttaattt tgtattattg tattacttat ttgaatttgt atttgttgtt ttgtattgtt 301 tttttattgt atattgcatt tttatttttg ttttgttttt tatgtgattt ttttttgttt 361 aataatttgt tagttggtga tagttttatg gatgtttttt ttattcgttt tttgttgtgt 421 tttttagagt gtttttcttt gttgtgtcgt tgtttgtcga cgtttttgcg tttgttttgt 481 aatttattat catcccattt tttattgttg atgttttttg atttttttta ttttattttt 541 gttttttttt ttttatggtg ttttttgtta ttgatttatt ttatttattt ttgtgttttg 601 tttttgttta ttattttatg tgtttttata tttgttggat ttatttgccg ccatattaca 661 gttatttatt ttttgtaata tgattttgca gttgataatg gattttttgt tgtttttgtt 721 gtttgtttag ttttgtattt gatttttgat agttattata ttgttgttga aatttggttt 781 gttattggag ttatagaata agatcaaata agttaataat aaaaaaaa //