Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!daemon From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: <9004132140.AA11716@life.lanl.gov.LANL.GOV> Date: 13 Apr 90 21:40:41 GMT Sender: daemon@genbank.BIO.NET Distribution: bionet Lines: 343 Approved: lear@genbank.bio.net Checksum: 37839 20 LOCUS RATCGM1AC1 2238 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, exons 1 and 2. ACCESSION M32476 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 1 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 2238) AUTHORS Rebstock,S., Lucas,K., Thompson,J.A. and Zimmermann,W. TITLE cDNA and gene and analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description pept 704 767 carcinoembryonic antigen-related protein (CGM1), exon 1 1770 + 2129 carcinoembryonic antigen-related protein, exon 2 pre-msg 512 > 2238 CGM1 mRNA and introns IVS 768 1769 CGM1 intron A IVS 2130 > 2238 CGM1 intron B BASE COUNT 615 a 532 c 539 g 552 t ORIGIN 1 ctcacccaac aacagctcag ccaacacata atattgaaag gtgctttgaa cccctccata 61 ggaagaagaa cagtctcttc caagacacac aggtcacctc ttcccaacat ccagcacatg 121 aaatttgtca cacaactgct ccaggacctc tctcctgggt cagaaacttg actggtgaca 181 ttagtgataa aggattaatc ttcatcccca ctcagtccct ttccaaccct cacagatatc 241 tgtcgccttc ctgctgggaa ataccacctt cccagaacac ggaagacaca gggcagactg 301 ggtgctcaac tgggtctctg tgtcacaggg acgcatgggt aggatggagg cttcctcttt 361 ggtgctgaca gattcaagac caggactcag cagatgtcct ggcatgagcc attgttctct 421 gagggcatgg ggatgtttgt cagcacagct cctcaaggtg ttgcctggag gagaagcaca 481 aagatagaaa agttgagacg gatgcagggt agcattgaga gtggaaggga cagagcagtg 541 ccttggacac agaccccgac caccccacaa tccacagatt ctgggaagtg ctcctccttg 601 agaggacacc tagctcaaga ggaggaaaga caataacagt taggtgcctt gctggaacga 661 aagctcctct cctaagagtg aggccattct agtgagaaga cagatggagc tgtcctctgt 721 gcttccctgc aagaggtgta ctccctggcg ggggctcctg ctcacaggta agggtgctta 781 ctccatggtt gtgtgtgggg tgggggaggc ccagagtctc ctgaaatgga cagaatcctt 841 agggaagatg tgtagtttct gtttgtaatc atgttataga aggtgcagtg agggaacagg 901 aagctctgag gcagacagga gctgaggagc agaatagaaa aggcctcagc tgcaattatt 961 caaattcagt cacagggtga atctccaaat agaaatcaaa catgggaggg cagtgagatg 1021 gctcagtgtg tggatacagg acagtctgaa ttcactcctc agctctcaca gcatagatgg 1081 acatacagac tcctgaaggc tcttctcttc cctccacact ggtgtgtgtc acgtacctgt 1141 agtgtgcaca ctgggacatg taccttccca aaccctcacg aacaatacag aaatattaaa 1201 ttacacttga atataattat ttttatgtgc tataaacatg gaaattatgt agacaaaccc 1261 agagatatct tttcttcctt ccttccttcc ttcttccttc cttccttcct tcctcttttt 1321 ccatactagt ttctgagatt ttttgaggaa ctgaaccttc caaaaagacc ataccaatcc 1381 ctgtcctcaa aaagcctttt ttattctaat ggactggaaa tcattgtatc cagaggagaa 1441 agtcaatgat ttagtggaac cataaataga acagaaaaca ttcaggaagt gaggattgta 1501 tggaggagga aaaagaggag gaggaggagg aagaggagga ggaggaggag gaggaccgag 1561 agccggttct ccactcacca gacactttat ggaaagagtg atatggggac acctgagtag 1621 aggattccac agagaggaaa tgacaccctt tgaggttctg agggcatgga ggtcatgctg 1681 ctcacctcca ttaagggtgc atcctaccta caggctgagg gatgctcaca cctgctcagg 1741 attgtcaact tttctctctt cccttctagc ctccctctta acctgctggc tcctgcccac 1801 cactgcccaa gtctccattg aatccttacc accccaggtg gttgaaggag aaaatgttct 1861 tctacgtgtt gacaatttgc cagagaatct catagccttt gtctggtaca aagggctgac 1921 aaacatgagc ctcggagttg cactgtattc actaacctat aacgtaactg tgacgggacc 1981 tgtgcacagt ggtagagaga cattgtacag caatgggtcc ctgtggatcc aaaatgtcac 2041 ccagaaggac acaggattct acaccctacg aaccataagt aatcatggag aaattgtatc 2101 aaatacatcc ctgcaccttc atgtgtactg taagtaattc tttgtgaatt ctgggttatg 2161 ggtggggtcc ttccactaga cacacagaag tgtcaggcct ggcttgtgct cccttccttc 2221 tgcattgatc tacatgtt // LOCUS RATCGM1AC2 539 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, intron B. ACCESSION M32477 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 2 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 539) AUTHORS Rebstock,S., Lucas,K., Thompson,J.A. and Zimmermann,W. TITLE cDNA and gene analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description IVS < 1 > 539 carcinoembryonic antigen-related protein intron B BASE COUNT 126 a 127 c 138 g 148 t ORIGIN 1 ccctgattcc agacctctgt tacagactta tctcctcatg gccccgagaa tcatcttact 61 agggctggct ttgcctctct ctcagcagag accagtgctt ttgagtagtg aaagtatttt 121 gctatgtgta agcagacagt gcattgcaat gagagccatg ttggttaggt ctcctggatg 181 tccctagtga ctcagcaggg tgaggatagg cagcaggtgc ccagtccatc atctaactct 241 tctaatggtc ttaggaaact ttcaggaagg tcaggatccc taaagagagg gacagaggac 301 acaggtcctc ctgacaactt cttgtcttct ggggacagtt cagtgatttc tcctctgcgt 361 gcacaggctc tgctgatgtg gacaggtcct tgtgaggcaa gtggatctgt gtccccaggc 421 aaaaactgag aaggttgagt agattcagaa accctggtaa attttcatat ctgagaatgg 481 tagacctttg atctactctg gacctggttc ctgtcctgga gcatgtgacc atgacaccc // LOCUS RATCGM1AC3 828 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, intron B. ACCESSION M32478 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 3 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 828) AUTHORS Rebstock,S., Lucas,K., Thompson,J.A. and Zimmermann,W. TITLE cDNA and gene analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description IVS < 1 > 828 carcinoembryonic antigen-related protein intron B BASE COUNT 193 a 255 c 190 g 190 t ORIGIN 1 aaaaagctgg attggctctc cctccaaccc ctgtgcctgt ctgccctgat gcactgggct 61 cactgaaggc cctcagacca gtccccactc accgagagtc ccaaaggtgt ctgaatgacc 121 aggaatttga gaaccccagc ttcagcccca gcccatgttg tttctcacct ggggccctca 181 ttttgcccca taatatagcc taatgcctcc catttcatct gcctgagctg tgttcacaaa 241 cccagttgta aggtggaaag gggatccaca attcctcaga aatgagctga agttcctata 301 agtgaccagg aggaggcagc atcaggaagt acaatgacta cttagggaag tattttctgt 361 accaggaacc caccttgtat cctggctttt atctctgttc ccatagacct ggaggtcatt 421 ggcacagctt ctcagacctc tcagctgctt cctgtatctg ctgccccacc aaggatcatg 481 ttcgcattcc tgacattcat tttctctggg aaagcaaggg tgtctatggg aagcacctag 541 acagaggttc aaggcatctc agaaaggcac gcagcacatg ggcagagcac ctcacagctc 601 aggacacaga ggaagtgtgc ccaccatctt gaatccctgc atgggacgat ggagcccaga 661 gcagtccttc caggactcag gtcacctcct cccacacact caggaagtga ggctcctgac 721 acagctgctc ctgggcccct tttctccctg agaatcctga ctggtgactg cagtgagaac 781 gcatctgtcc cctcccccac tcgtcacaca gctggcccct tgggatcc // LOCUS RATCGM1AC4 642 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, exon 3. ACCESSION M32479 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 4 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 642) AUTHORS Rebstock,S., Lucas,K., Thompson,J.A. and Zimmermann,W. TITLE cDNA and gene analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description pept + 61 + 420 carcinoembryonic antigen-related protein (CGM1), exon 3 pre-msg < 1 > 642 CGM1 mRNA and introns IVS < 1 60 CGM1 intron B IVS 421 > 642 CGM1 intron C BASE COUNT 151 a 160 c 154 g 177 t ORIGIN 1 ggtgccatct tagccaaata caaaagccct aatgttgatg gatctctgtc ttccttctag 61 tctccacttt gacctgtgga cgcgctgcca cctctgctca gctcagtatt gaatcagtgc 121 cgaccagcat ctctaaagga gaaagcgctc ttctccttgc tcacaatctc ccagagaatc 181 tccgagccat tttctggtat aaaggggcga ttgtgttcaa ggaccttgag gttgctcgat 241 atgtaatagg cacaaattca agtgtgccgg ggcctgccca caacggcaga gagacaatgt 301 acagcaatgg atccctcctg cttcagaatg tcactcggaa cgatgctgga ttctacacct 361 taaaaactct gagtacagat ctgaaaactg aaatagccta tgtgcaactc caggtggaca 421 gtaagtagtt ctctgtgatc attcagtgtt ggtccaggtt tagacacaca gcagtgtttt 481 cttgctctgt acctgccttc cctctgcact ttgtccccat gtaagtattt gagaactttg 541 tgcaagacac acatggtggt ttctgactcc accctcagag agtatcgtgt acgcatgcgt 601 gcgtgcgtgc gtgcgtgcgt gcgtgtgtgt gtgataggaa gg // LOCUS RATCGM1AC5 616 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, exon 4. ACCESSION M32480 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 5 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 616) AUTHORS Rebstock,S., Lucas,K., Thompson,J.A. and Zimmermann,W. TITLE cDNA and gene analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description pept + 90 + 449 carcinoembryonic antigen-related protein (CGM1), exon 4 pre-msg < 1 > 616 CGM1 mRNA and introns IVS < 1 89 CGM1 intron C IVS 450 616 CGM1 intron D BASE COUNT 152 a 153 c 147 g 164 t ORIGIN 1 ggaatggaga cctcagctca gggtacaggg cgccatctta gtcaaataca aacaccccaa 61 tattaatgga tctctctctt cttttctagc ctgttttatg agctatgctg gccctcccac 121 ttctgcccag ctcactgtcg aatcaggccc taccagcgtt gctgaaggag caagcgttct 181 tctccttgct cataatctcc ctgagaatct ccgagccatt ttctggtata aaggggcgat 241 tttgttcaag gaccttgagg ttgctcgata tgtaataggc acaaattcaa gtgtgccggg 301 gcctgcccac agcggcagag agacaatgca cagcaatgga tccctcctgc ttcagaatgt 361 cactcggaac gatgctggat tctacacctt aagaactctg agtacagatc tgaaagctaa 421 agtagtacat gtgcaactcc aggtgaacag taagtgaatc tctgtgatta gtctgtgctg 481 ggtggggcta gacacacagg aatgtccttt ctggcctgtg catagtgtcc ccatgttgag 541 gtttgggcgc ttagtgcaag acaaacatgg cggagacaaa ttgccataga tcagacttca 601 ttgtctgatt cccttc // LOCUS RATCGM1AC6 654 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, intron 4. ACCESSION M32481 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 6 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 654) AUTHORS Rebstock,S., Lucas,K., Thompson,J.A. and Zimmermann,W. TITLE cDNA and gene analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description IVS < 1 > 654 carcinoembryonic antigen-related protein intron D BASE COUNT 185 a 146 c 155 g 168 t ORIGIN 1 tctcgatgta tgttccccta agaaagacct caatcaggca ggacgctggt tgaggaaagg 61 atggcatcct aagagaggtg agcaccagga agaaccttga ctgcacacat ctgtatgaat 121 ctcaacaact tgtgacccaa gagaacattt tgtcagggct agactattaa ctctcagagc 181 tgacagagaa caatggtgtt ggctgtctat gtcaaaccgg ggtagatatt ttctccaaac 241 atgagtttca tatataaaat ctagaaactt tacagagccc atggaggggt gctgcttatg 301 ggcttgctcc ttgttgcttg ctcagcctgg tttcttatag cacccaggat ccccagtgga 361 ctggactctt ccctatcaat aaccaattag gaaatgtact ctgggcttgc acaggccaat 421 atggtggtga ttttacaact gaggctccct ctttcaaatc taatcgagca tgttgaagtt 481 ggcacagagc cagccagcat agttcctgat ccttttctga gacttgagcc tgccaagagt 541 atcagattgc ttccagccct cacccatctc tagacctgtg ggttggagag cacggtagca 601 agaacattta gaagtaaaaa tggagttgaa tggagccaca aaggaaactg agaa // LOCUS RATCGM1AC7 492 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, exon 5. ACCESSION M32482 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 7 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 492) AUTHORS Rebstock,S., Lucas,K., thompson,F.A. and Zimmermann,W. TITLE cDNA and gene analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description pept + 118 + 471 carcinoembryonic antigen-related protein (CGM1), exon 5 pre-msg < 1 > 492 CGM1 mRNA and introns IVS < 1 117 CGM1 intron D IVS 472 492 CGM1 intron E BASE COUNT 134 a 134 c 105 g 119 t ORIGIN 1 aaatgtctac acctgcatct aggctgagtg aagagtccat ctgctcagga tggaggtcgc 61 catctttcca ccaagcacag tgatcccatg tgatgacttt tctcctttcc cttccagcct 121 cctcgtgctg tgaccctctc actcctgccc cactcacgat agacccagtg ccacggcatg 181 cggctaaagg ggaaagtgtt cttcttcaag ttcgcaatct gccagaggat ctgcgaatgt 241 ttatctggtt caaatctgtg tatacctccc agatctttaa aatagcagag tacagcagag 301 ccattaatta cgtcttcagg ggccctgcac acagcggaag agagacagtg tacacgaatg 361 gatccctgct gctccaggat gccactgaga aagacacagg cttgtacaca ctacaaataa 421 tatacagaaa tttcaaaatt gaaacagcac acgttcaagt cagcgtgcac agtaagtgac 481 tctcaaggtc tc // LOCUS RATCGM1AC8 1341 bp ds-DNA ROD 05-MAR-1990 DEFINITION Rat carcinoembryonic antigen-related protein (CGM1) gene, exon 6. ACCESSION M32483 J05417 KEYWORDS carcinoembryonic antigen-related protein. SEGMENT 8 of 8 SOURCE R.norvegicus (strain Sprague-Dawley) liver DNA, clone lambda-rnCGM1-1. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1341) AUTHORS Rebstock,S., Lucas,K., Thompson,J.A. and Zimmermann,W. TITLE cDNA and gene analyses imply a novel structure for a rat carcinoembryonic antigen-related protein JOURNAL J. Biol. Chem. (1900) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.Zimmermann, 02-MAR-1990. FEATURES from to/span description pept + 640 / 987 carcinoembryonic antigen-related protein (CGM1), exon 6 pre-msg < 1 > 1341 CGM1 mRNA and introns IVS < 1 639 CGM1 intron E IVS 988 1341 CGM1 intron F BASE COUNT 357 a 329 c 321 g 334 t ORIGIN 1 ctacatacca tcccacccca tggcccacat atgcataaac taactgaagt attaaccagt 61 gtcagtagct ctgaatatga gaatttcatc aacacctgga catgcaagga cttgagacat 121 cagtctttta tccacccaca tgtatctgag tctgttcagg cactgaacct tcctaaaaga 181 tcaaactagt ctttcctatc aggactctag ctctagtcga cgtcgactgg acgacagaca 241 aggaagctca ctttgaagtg aagtcaggga ttgaatggaa ccagaaaagg actatgtcaa 301 agagagcaga aggtaaaggt cttcctctgt agaggaagag gtgatggaag gtaccctcat 361 cctccacatc tcctgagtgt gagcaggcac gtgaggacag ggagggtgga gacacgtgag 421 gacagagttt cacgggtagc agaggaagct acacacagtc aggtgcacca agggcatgga 481 ggtcgtttgc tcactccctc tgggttgtgc agacattgcc tcccacccga tgagtgatgg 541 atctaagcta ctctggtcac aggaccacat cttttcacca acggcagagg cgtcaatatt 601 gatggatttg tctctcttct tttctatctg cccttttagc ctgtgttcac ccttctacca 661 ctggccagct tgtaatcgaa tcggtgccac ccaatgttgt tgaaggggga gacgttctcc 721 tacttgttca taatatgcca gagaaccttc aatccttttc ctggtacaaa ggcgtagcca 781 ttgtcaacag acatgaaatc tctcggaaca taatagccag taatagaagc acattggggc 841 ctgctcacag tggcagagag acaatatatt ctaatggctc tcttctgctc cacaatgcca 901 ccgaggagga caatggatta tacaccttat ggactgtaaa cagacattct gaaactcaag 961 ggatacacgt gcacatccac atatacagta agtaattctc tgagatgtct tggtgctggt 1021 ggggttgaac ccatgttaca cacacaggag tgtcaggtgt gaactatgcc tttcttgctc 1081 tccatgtgtc tccatgttgg agtttgaggt gcaggcatat gcctagtaga cgtacggaaa 1141 tgggtcagaa tccctcaccg tctccacctg cagaacaggt gtggagatct cgtgtgacct 1201 gccgtgacag ctgcagtcat ctaggtcacc tgtgcacctc cttctcctga gcctcagtgg 1261 acaagtgcca gaacagaata caactttctt atgggcttag gagactcaca ggaaggtcag 1321 atccgttgcc tgacggtcga c //