Path: utzoo!attcan!uunet!jarthur!usc!cs.utexas.edu!tut.cis.ohio-state.edu!cica!iuvax!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: Date: 5 Jun 90 12:00:04 GMT Sender: root@genbank.BIO.NET Distribution: bionet Lines: 163 Approved: lear@genbank.bio.net Checksum: 22847 10 LOCUS HUMBREAKZ 680 bp ds-DNA PRI 05-JUN-1990 DEFINITION Human chromosome 10q24 breakpoint region. ACCESSION M33603 M31943 KEYWORDS Chromosomal translocation. SOURCE Human lung fibroblast DNA, clones G10-1 and G10-2. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 680) AUTHORS Zutter,M., Hockett,R.D., Roberts,C.W.M., McGuire,E.A., Bloomstone,J., Morton,C.C., Deaven,L.L., Crist,W.M., Carroll,A.J. and Korsmeyer,S.J. TITLE The t(10;14)(q24;q11) of T-cell acute lymphoblastic leukemia juxtaposes the delta T-cell receptor with TCL3, a conserved and activated locus at 10q24 JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 3161-3165 (1990) STANDARD full staff_review COMMENT Draft entry and printed sequence for [1] kindly submitted by M.M.Zutter, 07-FEB-1990. FEATURES from to/span description site 256 257 breakpoint BASE COUNT 119 a 215 c 196 g 150 t ORIGIN Chromosome 10q24. 1 ggatccacta gccgggtcag gcagagagaa ggaggccata gattcaggac caccttctgc 61 agctactctt ggcctgggaa tcttagagaa aggggtgcaa cgtgaacagt ttcttccgtc 121 ctggctgctg ttctaggacc caggaagcga gccccaggat cagacacaag aaaagaacag 181 gttcccccac ctccagtccc ctacacacat gcacttcgcg cccctagctc cggtgcccgt 241 ggtgctgcgg ggccagtggg ggctctgagc cccggtaaat cagcagaacc agtggccttt 301 tttttttttt ccggagagca ggcttcatct gggaggatgg cagcggggct tagccgccca 361 ggacagctag cttttcattt tcgttctctc ccggctgggt gtcctacccc gggcccagcc 421 ctgttatctt gggcacgaac aatgcaccgg taggctggtg atcggtggcg ggaagactac 481 tcccgggaca ttgggtacta agtggtggcc cgtgccgcct tctctgctgc cccgtcccgc 541 cttcctctgc tggccctggc tccctctgct ccgtttccac tctgggcact caactctccc 601 tctggcgtgg atcccccggg ctgcaggaat tcgatatcaa gcttatcgat accgtcgacc 661 tcgagggggg gcccggatcc // LOCUS HUMTCDXB 60 bp ds-DNA PRI 05-JUN-1990 DEFINITION Human T-cell receptor rearranged delta-chain gene V-region (V2-N-J1). ACCESSION M34439 M31943 KEYWORDS T-cell receptor; delta chain; rearranged gene; variable region. SOURCE Human (T-cell lymphoblastic leukemia patient 1143) DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 60) AUTHORS Zutter,M., Hockett,R.D., Roberts,C.W.M., McGuire,E.A., Bloomstone,J., Morton,C.C., Deaven,L.L., Crist,W.M., Carroll,A.J. and Korsmeyer,S.J. TITLE The t(10;14)(q24;q11) of T-cell acute lymphoblastic leukemia juxtaposes the delta T-cell receptor with TCL3, a conserved and activated locus at 10q24 JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 3161-3165 (1990) STANDARD full staff_review COMMENT Draft entry and printed sequence for [1] kindly submitted by M.M.Zutter, 07-FEB-1990. FEATURES from to/span description pept < 1 > 60 T-cell receptor delta-chain V2-N-J1-region (AA at 3) /hgml_locus_uid="LP0165Q" /nomgen="TCRD" /map="14q11.2" recomb 29 30 V2-region end/N-region start recomb 35 36 N-region end/J1-region start BASE COUNT 19 a 15 c 11 g 15 t ORIGIN 1 aagggtctta ctactgtgcc tgtgacacca aacgtacacc gataaactca tctttggaaa // LOCUS HUMTRANSX 50 bp ds-DNA PRI 05-JUN-1990 DEFINITION Human T-cell leukemia t(10:14)(q24:q11) chromosomal translocation. ACCESSION M33602 M31943 KEYWORDS T-cell receptor; chromosomal translocation; oncogene. SOURCE Human (T-cell lymphoblastic leukemia patient 1143) DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 50) AUTHORS Zutter,M., Hockett,R.D., Roberts,C.W.M., McGuire,E.A., Bloomstone,J., Morton,C.C., Deaven,L.L., Crist,W.M., Carroll,A.J. and Korsmeyer,S.J. TITLE The t(10;14)(q24;q11) of T-cell acute lymphoblastic leukemia juxtaposes the delta T-cell receptor with TCL3, a conserved and activated locus at 10q24 JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 3161-3165 (1990) STANDARD full staff_review COMMENT Draft entry and printed sequence for [1] kindly submitted by M.M.Zutter, 07-FEB-1990. FEATURES from to/span description ORF < 1 > 50 TCL3 oncogene (put.) recomb 20 21 10q24 DNA end/N DNA start recomb 27 28 N DNA end/14q11 DNA start BASE COUNT 12 a 10 c 19 g 9 t ORIGIN 1 cggtggtgct gcggggccag ggagggaacc gataaactca tctttggaaa // LOCUS MUSTCPB 2369 bp ds-DNA ROD 05-JUN-1990 DEFINITION Mouse t complex protein-10 (Tcp-10b) gene, complete cds. ACCESSION M22597 J03141 KEYWORDS t complex responder. SOURCE Mouse (haplotype tw5) testes germ cell DNA, clone T66B-a. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 519) AUTHORS Schimenti,J., Cebra-Thomas,J.A., Decker,C.L., Islam,S.D., Pilder,S.H. and Silver,L.M. TITLE A candidate gene family for the mouse t complex responder (Tcr) locus responsible for haploid effects on sperm function JOURNAL Cell 55, 71-78 (1988) STANDARD full staff_review REFERENCE 2 (bases 1 to 2369) AUTHORS Schimenti,J., Cebra-Thomas,J.A., Decker,C.L., Islam,S.D., Pilder,S.H. and Silver,L.M. JOURNAL Unpublished (1989) Lewis Thomas Lab, Princeton, NJ 08544-1014 STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1],[2] kindly submitted by L.M.Silver, 07-JUN-1989. The sequence is interrupted by introns that are not indicated in [1] or [2]. FEATURES from to/span description pept 421 1737 t complex protein-10 BASE COUNT 707 a 565 c 594 g 493 t 10 others ORIGIN Chromosome 17. 1 tgcagaaaac catggggccc gggccatatg aaggtgcagt gggttatgaa taagctctgc 61 tataggtgcc tttgactctc agggtgaaat accttgtctc cagtcagatc ccctaccgct 121 gtggctaaac ctctcattct tgtttctata cagcctaggt tatggagttg taggttgggg 181 acaaggggtt tgtcctgatg agaggcagcg aaaccttcca cagcaaaggt ctgacgaaga 241 actaagacct cccaggcgcc ctctcaaggc cctgttcacc tcaaggtaat gctggcagta 301 ctcatgtgat caggcaccat gctgactctc tgaaccaaag tgttttccac cctcctctgg 361 ggacacagcc cttaatgctt actggtcacc tcgaggctaa atagtcagca gagacaagcc 421 atgttggagg atctgagtca aggaaaaggg tccaaccatg agaagaggaa gatggagagc 481 acagcccaga tcactgagga agacagcaag cttgatgagg ttgtggggct gcagaagcag 541 atctgtgacc ttgggacaga gctcacaaga caatcatctt ggtggtgcgt agctcacaaa 601 gacctccaaa gccagatcga tgctctgata aaggagaacc aggagatccg tgcggagctg 661 aagaccttga agaagcagga tgcggaggcc accaaagcct gtataggctc gcccaccccg 721 gcaagagcaa gcaacactct gccagtgtac ataaagatag agggaattga ttccgagaag 781 acaacctcat gggatgaaag agatgagctt tctggaagtc ctccaaacag aagcacaatg 841 gccaccggag gaacagactc ccaggatgaa aggctgtctt ttacatctgt ggatgaaaag 901 gttatacaca tgtcttccaa atttctgcaa agaagcttcg gcagaatgtc accagaacca 961 ctgtctgaca gcacattcct ggacacagag tcactggctg acatctggtc ctcaaatcca 1021 gagacttcgg acagtgaact tctcctgcat gctcaagcaa gcagggtcat tccttgtttt 1081 tccccaaatg cactgtgggt gcagaatatt ccaacaaagt caagagctcc taaagaaata 1141 cagcaaacct cagacactac aaagactgat gagacaaagg aaaagcgaca cccaaacggc 1201 aaggtggagc ggatgctcag tgacgggcga accatcatca ccttccccaa tggaaccagg 1261 aaggagatca gtgctgacaa gaagaccacc ctcatcaggt tttttaacgg tgacatgaag 1321 aagatcaagt ccgatcagaa agtgatttat tattatgcgg acacacaaac aatgcacaca 1381 acctacccag atggtgttga agtggtgcag tttcctaaca agtggactga aaaattctac 1441 ccggatggct ccaaggaaac cgtgtttcct gatgggacag tgaaacagct taaggatgga 1501 tgtgaagaga cggtgttccc cgatgggaca tttgtgacag tgaagaggaa cggagacaaa 1561 accatcatgt tcagcaacgg agagaaagaa atccacacgg ccaggttcaa gnggatggaa 1621 ttcccagatg gnaccaccaa gactgtgtat tgcaatggct gccaggagac caagtatgcc 1681 tcagggaggg tcagggtcaa agatgagaag ggaactgtca tcctggactg gaagtagtgc 1741 atccaacaga ctcaaggcca ggcagtaggc tccaatctcc aaatatagtt ttgaccaaaa 1801 cagacaaagc gactcacgat tcccttgaca atcctggaga tcccctgcac atgaggagta 1861 aagagacatc caaaaattgt aaagaaagag accatgtagc caccaccatc ttgggagaga 1921 ggtcagagaa gcagtagcca gaaatgaggt cctggacatg gcttccgtgg ccttgtncnn 1981 accatgcctt ctgtcggagt ctggccctag agcagagggt acaatgggag caacgtgacc 2041 actgccagct agttcctggg agcagccgtt aacaacagct ggcncngtgt ttttgcttgg 2101 ccaacacctg cctgcatcta cttctatccc cttctagagt cctcatcaat gggatccagg 2161 gggatgtatc ttcactggtg cctgatgtat gaatagactt gatttaacca tcctgaagtg 2221 tctagacaga acctcatgtg gcattctatc ccataaattc acacaatttt gatntgtcaa 2281 tcaacaagga gttgagnaaa agcacagata aaaacaaaga cagaaacata gtgngccaca 2341 cctcctacct gttcctgtga gtctgccct //