Path: utzoo!attcan!uunet!decwrl!claris!apple!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: Date: 7 Jun 90 12:00:05 GMT Sender: root@genbank.BIO.NET Distribution: bionet Lines: 240 Approved: lear@genbank.bio.net Checksum: 40086 16 LOCUS DROIAB 2131 bp ds-DNA INV 07-JUN-1990 DEFINITION D.melanogaster infra-abdominal (iab-4) 1.7 and 2.0 kb RNAs, complete cds. ACCESSION M32109 KEYWORDS . SOURCE D.melanogaster (strain Canton S) embryo DNA, and cDNA to mRNA. ORGANISM Drosophila melanogaster Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae. REFERENCE 1 (bases 1 to 2131) AUTHORS Cumberledge,S., Zaratzian,A. and Sakonju,S. TITLE Characterization of two RNAs transcribed from the cis-regulatory region of the abd-A domain within the Drosophila bithorax complex JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 3259-3263 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence [1] kindly submitted by S.Sakonju, 14-FEB-1990. FEATURES from to/span description RNA 141 1802 1.7 kb RNA RNA 141 2101 2.0 kb RNA BASE COUNT 592 a 468 c 478 g 593 t ORIGIN Chromosome III, bithorax complex. 1 ttagttcgaa gcacgtgcgt gtgagttccg catgaacggt acaccaacac tttcgaacag 61 aaacccctca cagatactcc tcacacagat actctactgt actgggctac gatatctgtg 121 agatacgcac agataccggc aggccgccgg cgtcaaagtc gacgtgctgc cggcgtttga 181 gagaccgagc ggcgtgcaag aaatcgtcgg gcaacggctt caaatgaacg caaaacgttg 241 gaaagcaaac aaccggcaaa agccatcagc agctaaaaat aaaactgcaa ctatcaaagt 301 gaatctgtag agaaagagtg atagctcagt gtgcccagtg tttatttaat tacttattta 361 aatttgattt tcaaaataag ttgtgatttt ggttcgtttg tttgtttccc cattaaatcg 421 catcgcggaa ctggtttgca ttttgtatct tttatcgctg cagttcgttt ctgtgtggtt 481 tcatgtattc cccatctatt ccatctcttt ttgcagatac aagtgaatga aaccctaacg 541 tttaaacgcc accataaaca ccaaataaca aattttctgg caaacatggc atgtcacggt 601 cccatttaac gtggaaaatc ggcccagaaa ttcaacacga cgacaacttt ttcgactgtc 661 ccagaaagca aatatgtaaa gtgtatttgt gtgcgtgcca ttgacattga cttatggtca 721 tgaaggggtt agggggacgg gtctaagggt gggggttgat ggctaaaggg gggtctcgcc 781 gctacgacaa aaacttggat tctctcgttt cttttttgtc tttcgtcttc aacgcacatt 841 tatggtttgt tttgctcaca cacacactca aaaagcctac gcagcggcag agagggcaca 901 agcagcagag aaagagacga aacatgtctc ggatgatgat aaacgcctct cgtctatttt 961 ggcgggtcca tgaatgaaac aattgcctcg aatgactgac tgccagacag atagctagaa 1021 actgccctta cggcgggcaa attggggtat tttgggtttc ggtgactttg agggaccggg 1081 acctgagggc ccggaaagcc gacagcaata aacactgtgc tcagacaaaa gtctgatgag 1141 acagaccatc atgatgctca tcatcatcgg cgataataat gattttcatt tgcacattcc 1201 acccgtttcg ctgttgccgg cttccagcat tcagattcag tttgcattca gtggggcagg 1261 ttatttatgg cacttttcct atcgccactc actggggtaa tcgattttta ttggattaat 1321 attgctttcc gcatgatttg gccttctttt cgttatcact tagcaggttt cttgacgctg 1381 aggagtggac aatgactaaa actcagtcat ctggaaaagc tggaccaagg acatccatat 1441 acaagtgctg gctaaacgtc tgtggttatc gcaatcattt atggcggaat agaaggacac 1501 gtcttatgtg tcgattttcg ggccccatcc ctgttgaaaa atcagccgga cagcagcaac 1561 caccgaacac aagacacagg acgaccggaa gtgaggaaaa cgcttgtaaa atcggtgcac 1621 acgagtgcga gcgagacacg agcgaacggg ccgaaaggaa acgacaatta cgaggacacg 1681 ccggcttgct tttctgcttt tcctgtctgc tcctttcagt tgcggccgtg caatcgtcgg 1741 gtcaacaacg ccgcgtgtcc gatttcaatt tacaaattag aatatacatc tttacatctg 1801 gatttggttt catctttatc tgcatttgga tccgcgacga cgcataattt tcagcacttt 1861 tgaataatgg cgattctgtg cgacctcgta aacgtatact gaatgtatcc tgagtgtatc 1921 ctatccggta taccttcagt atacgtaaca cgagagagca ctagcaacgt gggatgtgaa 1981 acacttttta agacacctta atacacgtag cactttgtta tatggtctta cactttttaa 2041 atatctcgac ttataaatat ataatttaaa tataaatact ttaataatgc gatataagtt 2101 aaatacttcg atttactggc tggaagttca t // LOCUS ECOMUT1X 1545 bp ds-DNA BCT 07-JUN-1990 DEFINITION E.coli mutT1 mutant DNA with an insertion sequence IS1. ACCESSION M29970 KEYWORDS insertion sequence IS1. SOURCE E.coli (strain K12) DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 300 to 315; 1084 to 1105) AUTHORS Bhatnagar,S.K., Bullions,L.C., Lew,G. and Bessman,M.J. TITLE Characterization of the defect in the Escherichia coli mutT1 mutator gene JOURNAL J. Bacteriol. 172, 2802-2803 (1990) STANDARD full staff_entry REFERENCE 2 (bases 1 to 1545) AUTHORS Bhatnagar,S.K., Bullions,L.C., Lew,G. and Bessman,M.J. JOURNAL Unpublished (1989) Johns Hopkins, Baltimore, MD 21218 STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.J.Bessman, 19-NOV-1989. FEATURES from to/span description trns 316 1083 IS1 site 308 315 5' insertion target sequence site 1084 1091 3' insertion target sequence BASE COUNT 379 a 366 c 423 g 377 t ORIGIN 1 gatccttgcc cgtgcggttc tggtaaaaaa tacaagcagt gccatggccg cctgcaataa 61 aagctaactg ttgaagtaaa aggcgcagga ttctgcgcct tttttatagg tttaagacaa 121 tgaaaaagct gcaaattgcg gtaggtatta ttcgcaacga gaacaatgaa atctttataa 181 cgcgtcgcgc agcagatgcg cacatggcga ataaactgga gtttcccggc ggtaaaattg 241 aaatgggtga aacgccggaa caggcggtgg tgcgtgaact tcaggaagaa gtcgggatta 301 ccccccaaca tttttggtga tgctgccaac ttactgattt agtgtatgat ggtgtttttg 361 aggtgctcca gtggcttctg tttctatcag ctgtccctcc tgttcagcta ctgacggggt 421 ggtgcgtaac ggcaaaagca ccgccggaca tcagcgctat ctctgctctc actgccgtaa 481 aacatggcaa ctgcagttca cttacaccgc ttctcaaccc ggtacgcacc agaaaatcat 541 tgatatggcc atgaatggcg ttggatgccg ggcaacagcc cgcattatgg gcgttggcct 601 caacacgatt ttacgtcact taaaaaactc aggccgcagt cggtaacctc gcgcatacag 661 ccgggcagtg acgtcatcgt ctgcgcggaa atggacgaac agtggggcta tgtcggggct 721 aaatcgcgcc agcgctggct gttttacgcg tatgacagtc tccggaagac ggttgttgcg 781 cacgtattcg gtgaacgcac tatggcgacg ctggggcgtc ttatgagcct gctgtcaccc 841 tttgacgtgg tgatatggat gacggatggc tggccgctgt atgaatcccg cctgaaggga 901 aagctgcacg taatcagcaa gcgatatacg cagcgaattg agcggcataa cctgaatctg 961 aggcagcacc tggcacggct gggacggaag tcgctgtcgt tctcaaaatc ggtggagctg 1021 catgacaaag tcatcgggca ttatctgaac ataaaacact atcaataagt tggagtcatt 1081 accacatttt tcgctatttg aaaaactgga atatgaattc ccggacaggc atataacact 1141 gtggttttgg ctggtcgaac gctgggaagg ggagccgtgg ggtaaagaag ggcaacccgg 1201 tgagtggatg tcgctggtcg gtcttaatgc cgatgatttt ccgccagcca atgaaccggt 1261 aattgcgaag cttaaacgtc tgtaggtcag ataaggcgtt ttcgccgcat ccgacattcg 1321 cacacgatgc ctgatgcgac gctggcgcgt cttatcaggc ctaaagggat ttctaactca 1381 ttgataaatt tgtttttgta ggtcggataa ggcgttcacg ccgcatccga catttgcaca 1441 agatgcctga tgcgacgctg tccgcgtctt atcaggccta cgtgcggcat cagacaaatg 1501 tcactgcttt ggttcttcgc tccagtcatc gctttcggaa agatc // LOCUS YSAEF1B 2411 bp ds-DNA PLN 07-JUN-1990 DEFINITION C.albicans elongation factor 1-alpha (TEF-1) gene, complete cds. ACCESSION M29934 KEYWORDS elongation factor. SOURCE C.albicans (strain SC5314) DNA. ORGANISM Candida albicans Eukaryota; Plantae; Thallobionta; Basidiomycotina; Deuteromycotina. REFERENCE 1 (bases 1 to 2411) AUTHORS Sundstrom,P., Smith,D. and Sypherd,P.S. TITLE Sequence analysis and expression of the two genes for elongation factor 1-alpha from the dimorphic yeast Candida albicans JOURNAL J. Bacteriol. 172, 2036-2045 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by P.Sundstrom, 17-NOV-1989. FEATURES from to/span description pept 624 2000 elongation factor 1-alpha variant 1487 1487 g in EcoRI 2.3 kb clone; a in HindIII 4.9 kb clone BASE COUNT 760 a 402 c 477 g 772 t ORIGIN 1 acggtaaatt agtgggaggc aaatctccca aatcaattaa acggaaatta ctcgaagctg 61 caaatctgtt tgctgatgga cagaatgatc atagtattaa tccagatgtt acaattgaag 121 aggatctgat gtctcaaata aggtatcaag acaacgaatc aatgatcaac caagaaagat 181 tattagagaa attggatgga tcagctgtgc ttgtggaaac actgatacga catgccagta 241 aacgaagtag aaaaaactaa ctgtatattc gctaacaaaa aaattgtatt atttttagac 301 atcgtaaatg gggctgtagc cctaattatt ttttatttct cgtgatctgc acgtgtactg 361 ttgatttttt tgtgcgattg aaattatatt gtgctgttat cttaataaaa tcagtcatac 421 cttttttttt ttgggttttt gttgtttaat ttgtgataaa catcccatga ggaacagcga 481 gaaagttttt tgctgttcac tttctcgttc aacttttgca aagtaaagta aagaaaaaaa 541 aattttccct cgtcatcttg atttttactt cttcttcttc ttcttctttt tcctttcttc 601 acacattata gtcataatca atcatgggta aagaaaaaac tcacgttaac gttgttgtta 661 ttggtcacgt cgattccggt aaatctacta ccaccggtca cttaatttac aagtgtggtg 721 gtatcgataa aagaaccatt gaaaaattcg aaaaagaagc tgctgaattg ggtaaaggtt 781 ctttcaaata cgcttgggtc ttggacaaat tgaaggctga aagagaaaga ggtatcacca 841 ttgatattgc tttgtggaaa ttcgaaactc caaaatacca cgttaccgtc attgatgctc 901 caggtcacag agatttcatc aagaatatga tcactggtac ttctcaagct gattgtgcta 961 ttttgattat tgctggtggt actggtgaat tcgaagccgg tatttctaag gatggtcaaa 1021 ccagagaaca cgctttgttg gcttacactt tgggtgtcaa acaattgatt gttgctgtca 1081 acaagatgga ctctgtcaaa tgggacaaaa acagatttga agaaatcatc aaggaaacct 1141 ccaacttcgt caagaaggtt ggttacaacc caaagactgt tccattcgtt ccaatctctg 1201 gttggaatgg tgacaacatg attgaaccat ccaccaactg tccatggtac aagggttggg 1261 aaaaggaaac caaatccggt aaagttactg gtaagacctt gttagaagct attgacgcta 1321 ttgaaccacc aaccagacca accgacaaac cattgagatt gccattgcaa gatgtttaca 1381 agattggtgg tattggtact gtgccagtcg gtagagttga aactggtatc atcaaagccg 1441 gtatggttgt tactttcgcc ccagctggtg ttaccactga agtcaagtcc gttgaaatgc 1501 atcacgaaca attggctgaa ggtgttccag gtgacaatgt tggtttcaac gttaagaacg 1561 tttccgttaa agaaattaga agaggtaacg tttgtggtga ctccaagaac gatccaccaa 1621 agggttgtga ctctttcaat gcccaagtca ttgttttgaa ccatccaggt caaatctctg 1681 ctggttactc tccagtcttg gattgtcaca ctgcccacat tgcttgtaaa ttcgacactt 1741 tggttgaaaa gattgacaga agaactggta agaaattgga agaaaatcca aaattcgtca 1801 aatccggtga tgctgctatc gtcaagatgg tcccaaccaa accaatgtgt gttgaagctt 1861 tcactgacta cccaccatta ggtagattcg ctgtcagaga tatgagacaa accgttgctg 1921 ttggtgtcat caaatctgtt gaaaaatccg acaaagctgg taaagttacc aaggctgctc 1981 aaaaagctgc taagaaataa gctagttgaa tattatgtaa gatctgttag agtttttatt 2041 ttgtattcat ttatttagtt tattttctta ttatatttga aatataatat atattttaaa 2101 aaaaaaattt acagtgtaga atttttggta gtccggtttg ttttgaaatc agtggtggta 2161 ttcaatattt gattaaattt tggtatgaat ttgtgttgaa aaataaaaaa taagcgagaa 2221 atttgcgtgg catattattt gtaatgttcg aatattctct cgtacaccaa aaggtttacg 2281 attattcatt gacatataat aaaatctaat tactaaagag ttttgctgga aatgcatgta 2341 tagtttatat catttctatt atctggacca tcatggaaga atagcaatta tttcttgtta 2401 tcggtagtaa a // LOCUS YSAEF2A 2369 bp ds-DNA PLN 07-JUN-1990 DEFINITION C.albicans elongation factor 1-alpha (TEF-2) gene, complete cds. ACCESSION M29935 KEYWORDS elongation factor. SOURCE C.albicans (strain SC5314) DNA. ORGANISM Candida albicans Eukaryota; Plantae; Thallobionta; Basidiomycotina; Deuteromycotina. REFERENCE 1 (bases 1 to 2369) AUTHORS Sundstrom,P., Smith,D. and Sypherd,P.S. TITLE Sequence analysis and expression of the two genes for elongation factor 1-alpha from the dimorphic yeast Candida albicans JOURNAL J. Bacteriol. 172, 2036-2045 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by P.Sundstrom, 17-NOV-1989. FEATURES from to/span description pept 656 2032 elongation factor 1-alpha variant 2188 2190 gta in one strand of clone 2.6 EcoRI; gtata in opposite strand. BASE COUNT 750 a 428 c 430 g 761 t ORIGIN 1 gtatcaagaa aaaattgtat agtgcttgct gttcgatatt gctagaggca aagaaaaagg 61 attacctcac gcctaaaatg gaatttgaaa attgaggaga tgagttgagc ttttgtcttt 121 tacactttcc ctattcaatt gtgccgcaaa aacttcaata tctaacacag tgtgaaatat 181 ttgttatgta taccgaaagc caaataccat ttaaactggt atttcaagat ttcataaatc 241 aagtttctgg ttaaattaat tgctgttaaa cagaacaaga gcttcacatt gatgttggaa 301 taactactat agaattataa aatacacaaa accaggtcgt gtacgcaata acttttcaat 361 gtatgaaaaa attttttttt tttttgcttc ttctcttcgc ttcttttttc tagttatcaa 421 tttggcaatg aattgatttg attgcccttt gtttagttta ctatgaaaaa aaattttttt 481 tttgtctctg tcagattttc tctcattttt ttttttgcct cataatgaac aactcaaaaa 541 agaatataaa tttctcatca aagacctttc caattgaaaa ttttttcttt ccttcttttc 601 cttttttttt ttctttcttt cttcttttct aagtatacat tttatataat caatcatggg 661 taaagaaaaa actcacgtta acgttgttgt tattggtcac gtcgattccg gtaaatccac 721 taccaccggt cacttaattt acaagtgtgg tggtattgat aaaagaacca ttgaaaagtt 781 cgaaaaagaa gctgctgaat tgggtaaagg ttctttcaaa tacgcttggg tcttggacaa 841 attgaaggct gaaagagaaa gaggtatcac cattgatatc gctttgtgga aattcgaaac 901 tccaaaatac cacgttaccg tcattgatgc tccaggtcac agagatttca tcaagaatat 961 gatcactggt acttctcaag ctgattgtgc tattttgatt attgctggtg gtactggtga 1021 attcgaagcc ggtatttcta aggatggtca aaccagagaa cacgctttgt tggcttacac 1081 tttgggtgtc aaacaattga ttgttgctgt caacaagatg gactctgtca aatgggacaa 1141 aaacagattt gaagaaatca tcaaggaaac ctccaacttc gtcaagaagg ttggttacaa 1201 cccaaagact gttccattcg ttccaatctc tggttggaat ggtgacaaca tgattgaacc 1261 atccaccaac tgtccatggt acaagggttg ggaaaaggaa accaaatccg gtaaagttac 1321 tggtaagacc ttgttagaag ctattgacgc tattgaacca ccaaccagac caaccgacaa 1381 accattgaga ttgccattgc aagatgttta caagatcggt ggtattggta ctgtgccagt 1441 cggtagagtt gaaactggta tcatcaaagc cggtatggtt gttactttcg ccccagctgg 1501 tgttaccact gaagtcaaat ccgttgaaat gcatcacgaa caattggctg aaggtgttcc 1561 aggtgacaat gttggtttca acgttaagaa cgtttccgtt aaagaaatta gaagaggtaa 1621 cgtttgtggt gactccaaga acgatccacc aaagggttgt gactctttca atgcccaagt 1681 cattgttttg aaccatccag gtcaaatctc tgctggttac tctccagtct tggattgtca 1741 cactgcccac attgcttgta aattcgacac tttggttgaa aagattgaca gaagaactgg 1801 taagaaattg gaagaaaatc caaaattcgt caaatccggt gatgctgcta tcgtcaagat 1861 ggtcccaacc aaaccaatgt gtgttgaagc tttcactgac tacccaccat taggtagatt 1921 cgctgtcaga gatatgagac aaaccgttgc tgttggtgtc atcaaatctg ttgaaaaatc 1981 cgacaaagct ggtaaagtta ccaaggctgc tcaaaaagct gctaagaaat aaactaatta 2041 aatacctttg tttaaatagt tgtgattata ttattttttt aaaatatata taaataagag 2101 aataatcata caacatgtag taaggagcga agagtcccag ctctgtaaat aaaaaaaaga 2161 agaggagtta tgtgcttctt tgtttatgta tatatatata tatatatata tatattctta 2221 ccagttagtt aatcttacac atatgttgat ggtgctatat tgtacataca aactctaaat 2281 catatcagaa ctgcttggaa acctttccca ctaacaacac ccatccaatc cccttggttc 2341 tgtctccaac acacgttatt gatttccaa //