Path: utzoo!attcan!uunet!tut.cis.ohio-state.edu!cica!sol.ctr.columbia.edu!zaphod.mps.ohio-state.edu!usc!apple!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: Date: 21 Jul 90 12:00:18 GMT Sender: root@genbank.BIO.NET Distribution: bionet Lines: 4444 Approved: lear@genbank.bio.net Checksum: 47316 259 LOCUS BSUGLPKD 4259 bp ds-DNA BCT 21-JUL-1990 DEFINITION B.subtilis glycerol kinase (glpK) and glycerol-3-phosphate dehydrogenase (glpD) genes, complete cds. ACCESSION M34393 KEYWORDS glycerol kinase; glycerol-3- phosphate dehydrogenase. SOURCE B.subtilis (starin W168) DNA. ORGANISM Bacillus subtilis Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; Bacillaceae. REFERENCE 1 (bases 1 to 4259) AUTHORS Holmberg,C., Beijer,L., Rutberg,B. and Rutberg,L. TITLE Glycerol catabolism in Bacillus subtilis: Nucleotide sequence of the genes encoding glycerol kinase (glpK) and glycerol-3- phosphate dehydrogenase (glpD) JOURNAL Unpublished (1990) University of Lund, Dept. of Microbiology, Solvegatan 21, S-223 62 Lund , SWEDEN STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by C.M.E.Holmberg, 22-MAY-1990. FEATURES from to/span description pept < 1 679 ORF 1 (AA at 2) pept 698 2188 glycerol kinase (glpK) (EC 2.7.1.30) pept 2329 3996 glycerol-3-phosphate dehydrogenase (glpD) (EC 1.1.99.5) pept 4128 > 4259 ORF 4 binding 682 690 ribosome binding site binding 2315 2321 ribosome binding site binding 4116 4121 ribosome binding site signal 2243 2303 transcription termination signal signal 4000 4033 transcription termination signal signal 4067 4072 -35 region signal 4090 4095 -10 region BASE COUNT 1269 a 853 c 1092 g 1045 t ORIGIN 1 ccatggcgga tacgcggttg gcggcatcag cggtgcccat ttgaatccgg cgctaacgat 61 agcgcttgca tttgtaggag attttccttg gaaagaggtt ccggtttata ttgcggcgca 121 aatgatcgga gcgatcatcg gtgcggtgat tatttatctg cattacctcc cgcactggaa 181 gtcaacggat gatcccgctg ccaagctggg tgttttctca acagggccca gcattccgca 241 tacatttgca aacgttttaa gcgaagtgat tgggacattt gtccttgtac ttggaatctt 301 ggccataggt gcaaatcaat ttacagaagg acttaatcct ttaatcgtcg gtttcctcat 361 tgtagcaatc ggtatttctc tgggaggcac caccggctat gctatcaatc ctgcacgtga 421 cttaggtccg cggatcgccc acgcttttct tccgattccg gggaagggct catcaaactg 481 gaaatacgca tgggttccgg tagtcggccc gattttaggc ggatcattcg gcggtgtatt 541 ttacaacgct gcatttaaag ggcacatcac aagcagcttc tggattgtaa gcgttatatt 601 ggttgtggta ttgttaggac tctatgttta tacgaaatca cattctgcta aaacattatc 661 aaattctaaa tatatttaat caaaggggag acatcttatg gaaacgtaca ttttatcctt 721 agatcagggg acgacaagtt caagagcgat tctgtttaat aaagaaggca aaattgtcca 781 ctctgctcaa aaggaattta cacaatactt cccgcatcct ggctgggttg agcataatgc 841 caatgaaatt tggggctctg tcctcgcggt tatcgcctca gtcatctctg aatcaggaat 901 cagcgcttct caaattgccg gcatcggcat cacgaaccag cgcgagacga cggttgtgtg 961 ggataaagat acaggaagtc ctgtctataa tgcaatcgtt tggcagtcca gacagacgtc 1021 cggcatttgt gaggaacttc gtgaaaaagg atataatgat aaattcagag aaaaaacagg 1081 gcttttaatc gatccttact tctccggcac gaaggtgaag tggattttag acaatgtgga 1141 aggcgcaaga gaaaaagcgg aaaaaggcga gctgctgttt ggaacgattg atacgtggct 1201 catttggaaa atgtcaggcg gaaaagcgca tgtgaccgat tactccaatg cctcaagaac 1261 actgatgttt aatatttacg atttaaaatg ggacgatcaa ctgctcgaca ttctaggcgt 1321 accgaaatcc atgctccctg aagtgaagcc gtcctctcat gtgtatgcgg agactgttga 1381 ttatcacttc ttcggaaaaa atatcccgat tgctggagcg gcaggcgacc agcagtccgc 1441 attgttcggc caggcatgct ttgaagaagg catggggaaa aacacttacg gcacaggatg 1501 tttcatgctg atgaataccg gggaaaaagc aattaagtcc gaacatgggc ttttgacaac 1561 aatcgcttgg ggcattgacg gaaaagtgaa ctatgcgtta gaagggagca tttttgtcgc 1621 aggctctgcc atccagtggc ttagagacgg tttgagaatg ttccaggatt catcgctaag 1681 cgaatcttat gcagaaaaag tggattcaac tgacggcgtg tatgttgttc cagcatttgt 1741 cggactggga acgccttact gggacagcga tgtgcgcggt tcggttttcg gcctgacaag 1801 agggacaaca aaagagcact ttatccgtgc gacactggag tcattggctt atcagaccaa 1861 agatgtgctt gacgcaatgg aagcagattc aaacatttca ttaaagacgc tccgtgtaga 1921 cggaggagct gtaaaaaaca atttcctaat gcagttccaa ggagacctgt tgaatgttcc 1981 tgtggagcgc ccggaaatta atgaaacgac tgcacttggc gcggcttatt tggcgggtat 2041 cgctgtggga ttctggaagg accgttctga aatcgcgaac cagtggaatc tggataaacg 2101 gtttgagcct gaattggaag aagaaaaacg aaatgagctg tataaaggct ggcaaaaagc 2161 cgtgaaagca gctatggctt ttaaataaag taatactatg gtataatggt tacaagttaa 2221 taagaacggt cctgagatga ggagagacca cagcaccaaa gtgtaagcat gcactttggc 2281 tgttgtggtc tctttttcta tttaccgtga caacaaggag gaaacgtaat gatgaatcat 2341 caattttcaa gtcttgaaag agatcgcatg ctgacagaca tgacgaaaaa aacatatgac 2401 ctatttatta tcggaggagg aattacagga gccggaacag ctcttgacgc ggcatcaagg 2461 ggaatgaagg tcgcactaag cgaaatgcag gactttgcgg cgggaacatc aagccgatca 2521 acgaagctgg tacatggcgg cttgcgctat ttaaaacaat ttgaagtgaa aatggtcgct 2581 gaggtaggaa aagagcgggc gattgtgtat gaaaacggcc cgcatgtcac tacaccggaa 2641 tggatgctgc ttccgtttca taaaggcggc acattcggtt catttacaac atctattggg 2701 ttaagggttt atgacttcct tgcaggtgtg aaaaagtcag aacgaagaag catgctttca 2761 gcaaaagaaa cgctgcaaaa agagcctttg gtgaaaaaag acggcttaaa aggcggcggg 2821 tactatgtgg aataccgcac tgacgatgcg agactgacca tcgaagtcat gaaggaagcg 2881 gttaaattcg gggcagagcc tgtgaattac tccaaagtga aggagcttct ttacgaaaaa 2941 ggcaaagccg tcggcgtatt aattgaagat gtgctgacaa agaaagaata taaagtgtat 3001 gcgaaaaaaa ttgtcaatgc tacaggccct tgggtcgatc agctcagaga aaaagaccat 3061 tcgaaaaacg gaaagcattt gcagcataca aaaggcattc accttgtatt tgaccagtct 3121 gtctttccgc tgaaacaggc tgtatatttc gatacacctg atggccggat ggtatttgcg 3181 attcctcgtg aaggcaaaac atacgtggga acaacagaca ctgtttacaa agaggcgctg 3241 gagcatccgc ggatgacaac ggaggatcgt gattatgtca tcaaatcaat caattacatg 3301 ttcccggaac tgaatatcac tgcgaatgac atcgaatcca gctgggcggg gctgcgtccg 3361 ctgattcatg aagaaggcaa agatccttct gaaatttcac ggaaagacga gatttggaca 3421 tctgactcag gcctgatcac cattgccggc ggaaaactga ctggatacag aaaaatggcg 3481 gacgacatcg ttgatcttgt ccgtgatcgc ttaaaagaag agggcgaaaa ggattttgga 3541 ccatgtaaaa cgaaaaacat gccaatctct ggcgggcacg tcggcggttc gaaaaatctt 3601 atgtccttcg ttaccgcgaa aacaaaagaa ggaattgcag ccggtttatc agaaaaagac 3661 gcaaaacagc ttgcgatcag atacggctct aacgtagatc gcgtctttga ccgggtagaa 3721 gcgctgaaag atgaggccgc gaaacgcaac attccggttc atattcttgc tgaggcagaa 3781 tacagtatag aagaagagat gactgcaacc cctgctgact tctttgtccg cagaacggga 3841 cgtttatttt ttgatatcaa ttgggtaaga acatataaag atgccgttat tgattttatg 3901 agcgagcgat tccaatggga tgagcaggcg aaaaacaaac atacagaaaa cctcaacaag 3961 cttttacacg atgcggtcgt accgcttgag caataaatca taacgggctg tctgcagccc 4021 gttatttctt tttacgtgcc gaaaggggga gatctcaggt tatcaagtga cagaggcacc 4081 cgcttcatat aaaataatgg cataagctga tacataggag gacgaatatg acttggagaa 4141 agagctatga acgctggaaa cagacagaac atttagatct ggaattaaaa gagcgcctta 4201 ttgaattaga gggagatgaa caggcccttg aggactgttt ctataaagac cttgaattc // LOCUS CLCMTPLAS 379 bp ds-DNA PLN 21-JUL-1990 DEFINITION C.purpurea mitochondrial plasmid terminal 5' inverted repeat (TIR). ACCESSION M35177 KEYWORDS . SOURCE C.purpurea (strain K) mitochondrial plasmid pClK1 DNA. ORGANISM Claviceps purpurea Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina; Pyrenomycetes; Clavicipitales; Clavicipitaceae. REFERENCE 1 (bases 1 to 379) AUTHORS Duevell,A., Hessberg-Stutzke,H., Oeser,B., Rogmann-Backwinkel,P. and Tudzynski,P. TITLE Structural and functional analysis of mitochondrial plasmids in Claviceps purpurea JOURNAL Mol. Gen. Genet. 214, 128-134 (1988) STANDARD simple staff_review BASE COUNT 97 a 76 c 64 g 142 t ORIGIN 1 gagagagcag tcgtttcgat tatatgcctt tttttcgcga ccctataaga gagagaattt 61 gctacccttg atggtctctc cacggtttta ccgttaaatg cttttgatta attattgact 121 tggttctgtt tagatactag cttttgctgt actattaata gttctttgct taataccaaa 181 tttcctgatt tcaggtccga ttgaattttt actatgttaa ttcttttact acaatacaac 241 gtttctaacc cttgcctaac taatttatta gaaaacaaaa ctggcacagg tgttgggtta 301 aactttccgc taaaacccgc acgtcttcgt ctgcatggta tgggcgttag attctattct 361 acaatgtctt ccgccaaaa // LOCUS CLCMTPLASX 379 bp ds-DNA PLN 21-JUL-1990 DEFINITION C.purpurea mitochondrial plasmid 3' terminal inverted repeat (TIR). ACCESSION M35178 KEYWORDS . SOURCE C.purpurea (strain K) mitochondrial plasmid pClK1 DNA. ORGANISM Claviceps purpurea Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina; Pyrenomycetes; Clavicipitales; Clavicipitaceae. REFERENCE 1 (bases 1 to 379) AUTHORS Duevell,A., Hessberg-Stutzke,H., Oeser,B., Rogmann-Backwinkel,P. and Tudzynski,P. TITLE Structural and functional analysis of mitochondrial plasmids in Claviceps purpurea JOURNAL Mol. Gen. Genet. 214, 128-134 (1988) STANDARD simple staff_review BASE COUNT 105 a 75 c 62 g 137 t ORIGIN 1 gagagagcag tcgtttcgat tatatgcctt tttttcgcga ccctataaga gagagaattt 61 gctacccttg atggtctctc cacggtttta ccgttaaatg cttttgatta attattgact 121 tggttctgtt tagatactag cttttgctgt actattaata gttctttgct taataccaaa 181 tttcctgatt tcaggtccga ttgaattttt actatgttaa ttcttttact acaatacaac 241 gtttctaacc cttgcctaac taatttatta gaaaacaaaa ctggcacagg tgttgggtta 301 aactttccgc taaaacccgc acgtcttact ttagctcaac aaagaaagcg tagtgaactt 361 aaaaaagcac gtcttgctc // LOCUS DDISP60 328 bp ds-DNA INV 21-JUL-1990 DEFINITION D.discoideum spore coat 60 (sp60) gene, 5' flank. ACCESSION M34546 KEYWORDS spore coat 60. SOURCE D.discoideum (strain Ax4) DNA. ORGANISM Dictyostelium discoideum Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; Rhizopoda; Eumycetozoa; Dictyostelia; Dictyosteliida; Dictyosteliidae. REFERENCE 1 (bases 1 to 328) AUTHORS Fosnaugh,K., Loomis,K. and Loomis,W.F. TITLE Coordinate regulation of the spore coat genes in Dictyosteiium discoideum JOURNAL Dev. Genet. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by K.Fosnaugh, 24-MAY-1990. BASE COUNT 168 a 15 c 11 g 134 t ORIGIN 1 aaaacataga acaaatttaa ataattattt tttattaaat tgtattattt ttttttatta 61 tttatttatt ttttattttc aaaaaaaaaa aaaaaaagtt aacagacaaa aagtataatc 121 tatttaatta ttcaaaaaaa aaaatattaa atcattgtag tattttgttc atattcaaat 181 taaatatcaa tacaattaaa aaaagttaaa atgtaattat taatatatat atatatttat 241 caatatataa tttaatataa aaaaaaaaaa gaaatttaat aaacataaat atttataaaa 301 tcataaattt aaaataaata attttttt // LOCUS DDISP70 563 bp ds-DNA INV 21-JUL-1990 DEFINITION D.discoideum spore coat 70 (sp70) gene, 5' flank. ACCESSION M34547 KEYWORDS spore coat 70. SOURCE D.discoideum (strain Ax4) DNA. ORGANISM Dictyostelium discoideum Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; Rhizopoda; Eumycetozoa; Dictyostelia; Dictyosteliida; Dictyosteliidae. REFERENCE 1 (bases 1 to 563) AUTHORS Fosnaugh,K., Loomis,K. and Loomis,W.F. TITLE Coordinate regulation of the spore coat genes in Dictyosteiium discoideum JOURNAL Dev. Genet. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable [or printed] sequence for [1] kindly submitted by K.Fosnaugh, 24-MAY-1990. BASE COUNT 207 a 73 c 47 g 236 t ORIGIN 1 gaagtgtgag ttgcgcagtg tgttagtgtg ggtttaatga gagtgttttt tttttttttt 61 tttttttttt tgaacgtaca tatttatttg tttttattaa tatttcataa atgaatttgt 121 aaatataaaa ataaattgtt tttttttatt ttattttttt gattatgaca ataatttcaa 181 taaaatgtaa aatatgataa aaataatttt aattattgaa acacacacac tcactcactt 241 tttcccacta gtattacact ttccaatgaa aaataaatta atattgaaaa agaaggaaat 301 ggaaaaaaat gaaaaataaa aataattaaa taaacaataa tattacaaac acactatttc 361 tttctcaccc acacaaccaa tatactaaca cttctcatac acccaccaac acacctacac 421 ccagttcttc acattcatac acaaagttta atattacact ttaaaaaaca ttcatattaa 481 tgatttttat gatttattta tttattaatt tatttaattg tgtattttga ttattgctct 541 ctacttttta tatatttttt ttc // LOCUS DDISP96 682 bp ds-DNA INV 21-JUL-1990 DEFINITION D.discoideum spore coat 96 (sp96) gene, 5' flank. ACCESSION M34548 KEYWORDS spore coat 96. SOURCE D.discoideum (strain Ax4) DNA. ORGANISM Dictyostelium discoideum Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; Rhizopoda; Eumycetozoa; Dictyostelia; Dictyosteliida; Dictyosteliidae. REFERENCE 1 (bases 1 to 682) AUTHORS Fosnaugh,K., Loomis,K. and Loomis,W.F. TITLE Coordinate regulation of the spore coat genes in Dictyosteiium discoideum JOURNAL Dev. Genet. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable [or printed] sequence for [1] kindly submitted by K.Fosnaugh, 24-MAY-1990. BASE COUNT 321 a 37 c 63 g 261 t ORIGIN 1 tgaaaaaaaa aaaattttgt gtgtgatagt ttgtcaaaaa tcatttgaaa ttaaaatcat 61 attataatat atattaaaaa aatgttgtat ctttaatttt ttttcatact agtgtgttaa 121 atgaattaaa gtgtggtaat gaataaatga aaaaaaaaaa aaaattaaag tgagagagtg 181 tgtaaaagtg gtaatgaatg tgtgtttgag tgtgttaaaa atgtgtttac aaaatataat 241 aatttaaatt cattcatatt caactatgga gaaagcgtgt tttcaaacac aataaatgtg 301 taatgaaaaa tacaattaaa taattattta attttttgta tgattaaaaa aaaaagagta 361 aattagtagt gccaccctaa aacaataata ataataatta aataatatta atatttattt 421 aattttttta tttaattttt tttcaaaaca attcataata taaatttatt cttttttttt 481 tttttttttt tttttaaaaa tattcaactc agtaataata ataataaaaa taataacaat 541 aataaggaat tataatcaaa taataatata gctataatct ataattacta tagtaaaatt 601 acgtatacat atataaataa ttattattat cattgttttt aaaaataaat aaataaataa 661 taaaaaaaaa aaaaaaaaaa aa // LOCUS GLAA2GIA 1870 bp ds-DNA INV 21-JUL-1990 DEFINITION Giardia lamblia alpha-2 giardin gene, complete cds. ACCESSION M34550 KEYWORDS alpha-2 giardin. SOURCE G.lamblia (strain Portland-1) trophozoite DNA, clone pG2. ORGANISM Giardia lamblia Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Zoomastigophora; Diplomonadida; Diplomonadina; Hexamitidae. REFERENCE 1 (bases 1 to 1213) AUTHORS Alonso,R.A. and Peattie,D.A. TITLE Genomic organization of alpha giardin genes in Giardia lamblia JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (bases 1214 to 1870) AUTHORS Alonso,R.A. and Peattie,D.A. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.A.Alonso, 25-MAY-1990. Author address: R.A.Alonso Dept of Tropical Public Health Harvard School of Public Health 665 Huntington Avenue, Boston, MA 02115 FEATURES from to/span description pept 215 1105 alpha-2 giardin BASE COUNT 466 a 468 c 507 g 429 t ORIGIN 1 atactgcaga tacacctcat ggtgtacatg ctggcggcaa gtatcgtata aactctatgg 61 agacatgggg cagaccttgt ctcgctgctt tgacgagcga atggccccta ttttgcgcac 121 gctatggcgc gtcacagatg cataggataa gcgaactcat gatggaaatt caaattacct 181 taaaatatat tttctgagcg cttacattta gaaaatgccg aagctatccc agatcgtcgc 241 tgacatgaag caggccatcg atgccaagga cgaggcccag atcgcgttca tagcgtcgga 301 atactctgca gatgcgcgtc agaggattgc gcaggggtac agggaccaat acggcaagga 361 gctccccgac gacatcaaga aggcgctcaa gggcggctcc gaggagagcc tcctgatgga 421 tctcttcagc gatcgtcacg aggtccgcgc ccagcacatc cgcgacgcgc tttccggcaa 481 gaacgaccac atggccttct tcgacacagt cattctgtgc acccccgaag actggcacga 541 gaccgtcgcc gcctacacga ggatgttcaa gaagcccctc gtcgaggact tcatgaagga 601 tgtcggccgc aaggagaatt ggtgtctttt catggagaag tggatggctc acgagcgcac 661 tagccgtgaa ggcagccctg acgaggaagc agagaaactg aacaaggcgt tcagtgagag 721 cgaccacgac tacatttcca gcttcatggc tggggtgcct cccgaagaat acaagtccat 781 caacaccagc ttcaagagcc ttacaggaaa gggcatcgac caggccttcg ccaccatcta 841 tacggggact gactactact ccctgtactg cgcccacttt gctcttcttg gcatgcacaa 901 gcttgccgcc tacctggtca actgcgcctg caacgataag ggcgacgaga agcgcatgag 961 gaggatcacg ggcatgatgg tcgacaagtg cttggctgca aagtatgcct acaagaccta 1021 cgggagtatg aaagccgacg tcgaaaggtg ctttgataag cgcatggctc cgatcctctg 1081 taccctctgg cgcctaaggg agtgagcgcc tttactgcgg ggtttccttt cgctagtgaa 1141 ttgcctagcg ggtgtttact gccttctgtt tctttttgcc ctgtcctggc ggtccaagat 1201 gctatcctgc gatgagaggt ctttcgagaa cggatgcgag aagtctggga ttgctacatg 1261 ccgtccacct gactgtgagg gtgagtagga ctggagtagc ggcaaggagt gggagctcat 1321 gttgtccata gagctgtatg cctgatcaat ctgcccattt cctgcttgtc ctctgcgggt 1381 tttttgtttc agatctgagc tgcctaaccg agaggggccg tactctatgc ttagttctct 1441 attaaccaac tgaacagcct ttgctcgctt gcttgccagt gtatatttat atctatattt 1501 caagaacaga gagaggaccg tgatgaagag gagcaggatg agtgtcgcaa cggaccagaa 1561 cacgacaata agggctatag acatcttaga atgataacca acaaagctta tgaactcctc 1621 tccactgaaa gaagaggaaa gataccgagt ctcgtaaaac tgaatggtag tcctatcgat 1681 ggtgtgcccc cagatagggt ctactatcgg ctggttggta agattgcttg cagcggtatc 1741 gacagctgcc acaaccacta agtagtcaag gctcgtgctt gtacgaagga aggtcaacgg 1801 gaatgcgaag catggaccag gtgttatttg cttgctcgat aaactcagga gtatatattt 1861 cagtattgtc // LOCUS KAEHUTC 1625 bp ds-DNA BCT 21-JUL-1990 DEFINITION K.aerogenes histidine utilization repressor C (hutC) gene, complete cds. ACCESSION M34604 KEYWORDS histidine utilization repressor C. SOURCE K.aerogenes (strain W-70) DNA. ORGANISM Klebsiella aerogenes Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 1625) AUTHORS Schwacha,A. and Bender,R.A. TITLE Nucleotide sequence of the gene encoding the repressor for histidine utilization genes of Klebsiella aerogenes JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.A.Bender, 29-MAY-1990. FEATURES from to/span description pept < 1 669 histidine utilization repressor G (AA at 1) pept 731 1456 histidine utilization repressor C (hutC) pept 1599 > 1625 histidine utilization repressor U signal 667 686 hutC promoter signal 1522 1493 Pc promoter signal 1531 1557 Puh promoter binding 1475 1495 CRP binding site site 34 61 helix-turn-helix BASE COUNT 311 a 476 c 508 g 330 t ORIGIN 1 gtcgacggcg agcagttaga agccgcgcat caggcgctgc gcgaggcggt ggccgactgt 61 cagcgggcgg gtaaacgcac gctggtcctg ggcggcggcc acgagacggc cttcggccac 121 ggcgctgggg tactggatgc cttcccaggc gaaaaagtgg gcattattaa tctcgatgcg 181 catctggatc tgcgctttgc cgactgcgcc agctccggga cgccgttccg ccagttggcg 241 ctggagtgtg acgcgcagca gcgcggtttt cactatacct gcatcggggt tagccgggcg 301 gcgaacaccc aggcgctatg ggatgaagcg gcgcgccgcc aggtggctat cgttgaagat 361 ctggaggtgc tgacagcctt cgaaactcgc gtgttgccgg agcttgagcg caatatcgcg 421 caattcgacc gcctgtatct gactatcgat ctcgacgtgc tgccggcgcg agaaatgccg 481 gcggtgtcgg ccccggcggc gctgggcgtg ccgctgggca cgctgctgcg catcgttgag 541 ccgctgtgcc gcagcggtaa gctgcaggcg gtggatctgg tggagtttaa cccgctgttt 601 gacattgacg gtcagggcgc tcgcgcggcg gcccgtgtgg catggcaaat cgcccattgg 661 tggcgctagc gatccgcgct attattttcg tttcgccgct ccgcttatta cgcataagga 721 aagccaggcc atgtttgcac aacaacctcg ttccgcgccc gcgcctttct atgaaaaggt 781 gaagcaggcg atcagcgaaa agatccacag cggcgtctgg cgaccgcatg accgtatccc 841 gtcggaagct gagctggtgg cccagttcgg cttcagccgg atgaccatca atcgcgcgct 901 gcgcgagctg acggacgaag gcctgctggt caggttgcaa ggggtgggaa cctttgtcgc 961 cgagccgaaa gggcagtcgg cgctgttcga ggtgcgcagt attgccgcag aaattgtcgc 1021 ccgtcaccat cagcaccgct gtgaggtact cctgcttgag gagacccggg cggatcatat 1081 tcaggcgacg gcgctcagcg tcccggaagg cacccgcatc tttcactcgc tgatggtgca 1141 ttacgaaaac gaggtgccgg tgcaaatcga agatcgctgc gtcaatgccg cagtggtacc 1201 ggactatctg catcaggact acaccgccac cacgccccat gattacctgt cgctgatcgc 1261 gccgttaacc gaaggtgaac atattgttga agcggtgcag gccacggcgg aagagtgcgc 1321 gctgctgcat attcacgccc acgatccgtg cctgctgatc cgtcgtcgca cctggtcgac 1381 aacccacatc gtctcccacg cgcgcctgct gttccccggt agccgatatc gtctgcaggg 1441 gcgctttggc tcctgatcca cgctggcgtc agcaaaacgt gattgctgac gcaatataac 1501 aaaattgtat catttctgtt aaatcctggc ttgcgcatgc ttgtatagac aagtatatgt 1561 atctacgtaa acaacgttta ttgtcaggag aaaccccgat gtcgcaaagc aaatatcgcc 1621 agctg // LOCUS MUSMHH2KBM 66 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse major histocompatibility complex antigen H-2Kbm29 mRNA. ACCESSION M34542 KEYWORDS major histocompatibility complex antigen. SOURCE Mouse ((C3H.CAS3(R4)XB6)F2, mutant #6414(bm29)), liver, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 66) AUTHORS Horton,R.M., Loveland,B.E., Parwani,A., Pease,L.R. and Fischer Lindahl,K. TITLE Immunological characterization and molecular analysis of the H-2Kbm29 mutant JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (sites) AUTHORS Weiss,E., Golden,L., Zakut,R., Mellor,A., Fahrner,K., Kvist,R. and Flavell,R.A. TITLE The DNA sequence of the H-2Kb gene: Evidence for gene conversion as a mechanism for the generation of polymorphism in histocompatibility antigens JOURNAL EMBO J. 2, 453-462 (1983) STANDARD full automatic COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.M.Horton, 24-MAY-1990. Mutation in codon 89 changes bp 43 and 44 to "gc", otherwise this sequence is identical to reference 2. FEATURES from to/span description pept < 1 > 66 MHC H-2Kbm29 (AA at 3) BASE COUNT 14 a 22 c 19 g 11 t ORIGIN 1 cgagtggacc tgaggaccct gctcggctac tacaaccaga gcgcgggcgg ctctcacact 61 attcag // LOCUS YSCKGD2 2112 bp ds-DNA PLN 21-JUL-1990 DEFINITION S.cerevisiae dihydrolipoyl transsuccinylase (KGD2) gene, complete cds. ACCESSION M34531 KEYWORDS alphaketogluterate dehydrogenase complex; dihydrolipoyl transsuccinylase. SOURCE S.cerevisiae DNA. ORGANISM Saccharomyces cerevisiae Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes; Endomycetales; Saccharomycetaceae. REFERENCE 1 (bases 1 to 2112) AUTHORS Repetto,B. and Tzagoloff,A. TITLE Structure and regulation of KGD2, the structural gene for yeast dihydrolipoyl transsuccinylase JOURNAL Mol. Cell. Biol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by A.Tzagoloff, 29-MAY-1990. FEATURES from to/span description pept 560 1987 dihydrolipoyl transsuccinylase mRNA 306 > 1987 dihydrolipoyl transsuccinylase mRNA mRNA 451 > 1987 dihydrolipoyl transsuccinylase mRNA (alt.) signal 196 200 CAAT box signal 228 232 CAAT box BASE COUNT 649 a 435 c 425 g 603 t ORIGIN 1 tcgaacgtct cgtggaaagc cttgaccgtt gcgtctttac tcgtctctat tcaaccctgt 61 ggtcctatta gaaccgatct ttgttccatc gtcattacta cttcttgtct cttctctctt 121 ggggaataat aaacaaaaca attccagcca cccgcatctc cgtcaaagac gatattaaca 181 accctttttt tgcagccaat caaaactaag gtcctgcccg gagtgagcca ataaagcggc 241 cacaaattac gcaggaatct atggttccta aagcttattc ttattctaca ttgacaccat 301 tctactacag ggctcggatc cacacttggt ctatcagcaa atgcaaatcc tttttccctc 361 aactaggcct acttttcata tataatctct ttttgagctt caggggagga aatatctaac 421 gtaaaaaaaa gaaaaatccg aaataaaaaa ttaggcagct atctttaacg gtatatatca 481 gtgaatagat atattgttat aaacttcact accacatttg ttacaaccaa agacacaact 541 tcagataatt atttaaacaa tgctttccag agcgacgcgt actgcagctg ccaaatcctt 601 agtaaaatct aaagtggcta gaaatgttat ggctgcttct ttcgtcaaga gacatgcttc 661 tacaagtttg ttcaaacaag ctaacaaggt cgaatcctta ggttcaatat atttatccgg 721 caagaaaatt tcagttgcgg cgaatccgtt ctccataact agcaatcgtt ttaaatctac 781 ctctattgaa gttcctccga tggcagagtc cctgactgaa ggctctttaa aggaatatac 841 taaaaacgtt ggtgatttta ttaaggagga cgagctgttg gccactattg agaccgataa 901 aattgatatt gaggtcaatt cgccagtatc aggtactgtt acgaagctaa atttcaaacc 961 agaggacact gtcactgttg gtgaggagtt agctcaggtc gagcctggtg aagcacctgc 1021 tgagggttct ggagaatcta agccagagcc taccgaacaa gcggagcatc gcaaggtgtc 1081 gccgcaaggg aaaactcaag tgaggaaacg gcttcaaaga aagaagctgc tccaaagaaa 1141 gaagccgctc caaagaaaga agttacagaa ccaaaaaagg actgatcaac caaagaagac 1201 cgtctctaag gcgcaggaac ccccagtagc ctctaactct ttcacaccat ttccacgtac 1261 agaaaccagg gtcaaaatga accgtatgag attgaggatt gccgaaagat taaaagagtc 1321 tcaaaacact gctgcttcct taaccacatt caacgaagtt gacatgtcag ctttgatgga 1381 aatgaggaaa ctgtataaag atgagattat taagaagacc ggtactaaat tcggattcat 1441 gggtcttttc tccaaagcat gtaccttggc cgccaaggat attccagccg tcaatggtgc 1501 cattgaaggt gaccagattg tttatcgtga ttacacagat atttctgttg ctgtggccac 1561 tccaaagggt ttggttaccc ccgtcgttcg taatgcagag tcattgagtg ttttagatat 1621 tgagaacgaa attgttcgct tgagtcataa agcgcgtgat ggcaaattaa ccctagaaga 1681 tatgacgggt ggtactttca ccatatctaa tggtggtgtt tttggttcat tatacggtac 1741 tcctatcatc aattcaccac aaacagccgt cctaggcttg catggtgtca aagagagacc 1801 tgtcactgtt aatggacaaa ttgtctcaag accaatgatg tacttggctt tgacttatga 1861 tcatagattg ctagatggtg agaagctgtt atccttcttg aagactgtta aagagttgat 1921 tgaagaccct agaaaatgtt gttatggtga tttgaaattt gcagcccata ccaatctgat 1981 ttcatgatta ttcttgtccg ctattactgt gtgaatctct tctatttaag tatgatattt 2041 aaagatatgc tatgatgata aatggaacta tgaattaatg ttttcttttt ataatgagat 2101 atggaaaagc gc // LOCUS PHUDLTN 781 bp ss-mRNA VRT 21-JUL-1990 DEFINITION P.bicolor [D-ala-2]deltorphin mRNA, complete cds. ACCESSION M34560 KEYWORDS [D-ala-2]deltorphin. SOURCE P.bicolor bicolor skin, cDNA to mRNA, clone AD2. ORGANISM Phyllomedusa bicolor Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Amphibia; Lissamphibia; Anura; Neobatrachia; Bufonoidea; Phyllomedusidae. REFERENCE 1 (bases 1 to 781) AUTHORS Richter,K., Egger,R., Negri,L., Corsi,R., Sevrini,C. and Kreil,G. TITLE cDNA encoding [D-ala-2]deltorphin precursors from skin of Phyllomedusa bicolor also contain genetic information for three dermorphin-related opoid peptides JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 4836-4839 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by G.Kreil, 18-MAY-1990. FEATURES from to/span description pept 30 713 pre pro[D-ala-2]deltorphin matp 348 368 [D-ala-2]deltorphin II matp 456 476 [D-ala-2]deltorphin I matp 564 584 [D-ala-2]deltorphin I matp 672 692 [D-ala-2]deltorphin I mRNA < 1 781 [D-ala-2]deltorphin mRNA BASE COUNT 323 a 69 c 233 g 156 t ORIGIN 1 tcagtacttc ctgaataaca agacccaaca tgtctttctt gaagaaatcg cttctgcttg 61 tacttttcct tggattagtg tcccattccg tttgtaaaga agagaaaaga gagactgaag 121 aggagaatga aaatgaggaa gaaaatcatg aagtgggaag tgagatgaag agatatgcgt 181 tctggtatcc gaatagagac actgaagaga agaatgaaaa tgaggaagaa aatcaggaag 241 agggaagtga gatgaagaga tatgcgttcg gctatccgaa aagagagcct gaagaggaaa 301 atgagaatga ggaagaaaat catgaagagg gaagtgagat gaagagatat gcgtttgaag 361 ttgtgggagg agaagctaag aaaatgaaaa gagaacctga agaggaaaat gagaatgagg 421 aagaaaatca tgaagaggga agtgagatga agagatatgc gtttgacgtt gtgggaggag 481 aagctaagaa aatgaaaaga gagcctgaag aggaaaatga gaatgaggaa gaaaatcatg 541 aagagggaag tgagatgaag agatatgcgt ttgacgttgt gggaggagaa gctaagaaaa 601 tgaaaagaga gcctgaagag gaaaatgaga atgaggaaga aaatcatgaa gagggaagtg 661 agatgaagag atatgcgttt gacgttgtgg gaggagaagc taagaaaatg taatatttca 721 taacttaaag gagcacaatt atcagttata tgccaaacat atattaaatg atagataact 781 t // LOCUS HSBGPG3A 1829 bp ds-DNA VRL 21-JUL-1990 DEFINITION Bovine herpesvirus type 1 glycoprotein gIII gene, complete cds. ACCESSION M27491 KEYWORDS glycoprotein. SOURCE Bovine herpesvirus type 1 DNA, clones pDR[7,123] and p7-123. ORGANISM Bovine herpesvirus type 1 Viridae; ds-DNA enveloped viruses; Herpesviridae. REFERENCE 1 (bases 1 to 1829) AUTHORS Fitzpatrick,D.R., Babiuk,L.A. and Zamb,T.J. TITLE Nucleotide sequence of bovine herpesvirus type 1 glycoprotein gIII, a structural model for gIII as a new member of the immunoglobulin superfamily, and implications for the homologous glycoproteins of other herpesviruses JOURNAL Virology 173, 46-57 (1989) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by T.J/Zamb, 31-AUG-1989. FEATURES from to/span description pept 160 1725 glycoprotein gIII precursor sigp 178 222 put. glycoprotein gIII signal peptide matp 223 1723 glycoprotein gIII signal 25 28 CAAT box signal 61 64 TATA box BASE COUNT 247 a 737 c 597 g 248 t ORIGIN 97 bp upstream of BamHI site; between map units 0.122 and 0.135. 1 cgcgcctgca gccgcgcgtg tgctcaatcc cggaccacga aagcacaaaa cggacgccct 61 taaaaatgta gcccgcgccg cggtcgcggc catcttggat ccacccgcgc gcacgaccgc 121 cgagagaccg ccagcccgag acctcgccgc gcgtccgcca tgggcccgct ggggcgagcg 181 tggctgatcg cagctatttt cgcctgggcg ctcctgtctg cccggcgggg gctcgccgag 241 gaggcggaag cctcgccctc gcctccgccc tccccgtgcc caaccgagac ggaaagctcc 301 gctgggacca ccggcgcaac gccccccacg cccaacagcc ccgacgctac gccagaggac 361 agcacgcccg gtgctactac gcccgtgggg acgccggagc cgccgtccgt gtccgagcac 421 gacccgcccg ttaccaacag cacgccgccg cccgccccgc ccgaggacgg gcgacccggc 481 ggcgctggca acgcgagccg cgatgggcga cctagcggcg gggggcggcc tcgccccccg 541 cggccgagca aagccccgcc gaaggagcgc aagtggatgc tctgcgagcg cgaggccgtg 601 gccgcctcgt acgccgagcc gctgtacgtg cactgcggcg tggccgacaa cgccactggc 661 ggtgcgcgcc tggagctctg gtttcagcgc gtgggcaggt tccgctccac gcgcggcgac 721 gacgaggccg tgcgcaaccc ctttccgcgg gccccgcccg tgctgctgtt cgtagcccag 781 aacggctcga tcgcgtaccg tagcgcggag ctgggcgaca actatatttt cccttcgccc 841 gccgaccccc gcaacttgcc cctgaccgtg cgctccctga cggccgccac cgagggcgtg 901 tacacttggc gccgcgacat gggcaccaag tcacagcgca aggtcgtgac cgtcacgacg 961 caccgcgcgc ccgctgtttc cgtcgaaccc cagccagcgc tagaaggcgc cggctacgcg 1021 gccgtgtgcc gcgccgccga gtactacccg ccgcgctcca cgcgcctgca ctggttccgc 1081 aacggctacc ccgtggaggc tcggcacgcg cgcgacgtct ttacggtcga cgactccggg 1141 ctcttttcgc gcacgtccgt ccttacgctc gaggacgcga cgccaaccgc ccacccgccc 1201 aacctgcgct gcgacgtctc ctggttccag agcgctaaca tggagcgccg cttttacgcg 1261 gctggcacgc cggccgttta ccgcccgccc gagctgcgcg tgtacttcga gggcggcgag 1321 gccgtctgcg aggcgcgctg cgtccccgag gggcgcgtct ccctgcgctg gacggtgcgc 1381 gacggcatcg ccccgtcgcg cactgagcag accggcgtct gcgccgagcg gcccgggctg 1441 gtaaacctgc gcggcgtgcg cctgctttct acaaccgacg ggcccgtcga ctacacctgc 1501 accgccactg gctacccggc accgctgccc gagttctccg cgaccgccac gtacgacgcc 1561 tcgcccggcc taatcggaag ccccgtcctc gtcagcgtcg tggccgtcgc ctgcggtctc 1621 ggcgccgtgg ggctcctgct ggtggcggcc tcgtgcctgc ggcgcaaggc ccgggtaatc 1681 caacccggtc ttactcgcgc tcgcgccctc ggctccgcgc cctagacgac cggcacggcc 1741 tggaggcgct ggcggctgcc ggtgccgctc acaccgcgcg ccacaaccgc gacgtgtggc 1801 agcgcttttc ccgcgtctgc gaggccggc // LOCUS DOGCHAMC 933 bp ss-mRNA MAM 21-JUL-1990 DEFINITION Dog mast cell chymase mRNA, complete cds. ACCESSION J02904 KEYWORDS chymase. SOURCE Dog skin mastocytoma cell line BR, cDNA to mRNA. ORGANISM Canis sp. Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Carnivora; Caniformia; Canoidea; Canidae. REFERENCE 1 (bases 1 to 933) AUTHORS Caughey,G.H., Raymond,W.W. and Vanderslice,P. TITLE Dog mast cell chymase: Molecular cloning and characterization JOURNAL Biochemistry 29, 5166-5171 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.W.Raymond, 17-MAY-1990. FEATURES from to/span description pept 10 759 mast cell chymase precursor sigp 10 72 mast cell chymase signal peptide matp 73 756 mast cell chymase mRNA < 1 933 mast cell chymase mRNA signal 916 921 polyA signal BASE COUNT 233 a 272 c 229 g 199 t ORIGIN 1 cctgagaaga tgcattgtct tcctctcacc ctgctgctcc ttctcctatg ttccagagca 61 gaagctgagg agatcatcgg gggcacagag tccaagccac actcccgccc ttacatggcc 121 cacctggaaa tcctcactct ccggaatcac ctggcgtctt gtggtggttt cctgataagg 181 cggaacttcg tactgacagc tgctcactgt gcaggaaggt tcataatggt caccctggga 241 gcccataaca tacaaaagaa agaagacacg tggcagaagc ttgaggtcat aaaacaattc 301 cctcacccaa aatatgatga ccttactctt cgccatgaca tcatgctact gaagttgaag 361 gagaaggcca acctgaccct ggccgtgggg accctccccc tctcacccca gttcaacttc 421 gtcccacctg ggagaatgtg ccgggtggct ggctggggaa aaagacaagt caatggatca 481 ggctctgaca ctctgcaaga ggtgaagctg aggctcatgg acccccaggc ctgtagacac 541 tacatggctt ttgaccacaa cctccagctg tgtgttggca atcccaggaa gacaaaatct 601 gcatttaagg gagattcagg gggccctctt ctgtgtgctg gggtagccca gggaattgtg 661 tcctatgggc agaatgatgc aaagccccct gctgtcttca cccgaatctc ccactaccgg 721 ccctggatca ataaggttct gaagcagaat aaagcctgaa tggagcctgg gcaagcctga 781 ggggaaatct ggaaccagac ctgagcaggc tctctgccac ttactctgga gctgcctcta 841 gtctctactg aggccccact acatccctca gacccaagag ggctcctcca ggtcacagag 901 tcctcagtaa acctcaataa agatccagct tcc // LOCUS MUSIGHACQ 340 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig H-chain mRNA VDJ-region, partial cds. ACCESSION M34732 KEYWORDS diversity exon; immunoglobulin heavy chain; joining exon; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H210-56, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 340) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 340 Ig H-chain VDJ-region (AA at 1) recomb 291 292 V-region end/D-region start recomb 298 299 D-region end/J-region start BASE COUNT 80 a 79 c 93 g 88 t ORIGIN 1 gtggagtctg gaggaggctt ggtacagcct gggggttctc tgagactctc ctgtgcaact 61 tctgggttca ccttcactga ttactacatg agctgggtcc gccagcctcc aggaaaggca 121 cttgagtggt tgggttttat tagaaacaaa gctaatggtt acacaacaga gtacagtgca 181 tctgtgaagg gtcggttcac catctccaga gataattccc aaagcatcct ctatcttcaa 241 atgaacaccc tgagagctga ggacagtgcc acttattact gtgcaagaga tagcggcggg 301 tttgcttact ggggccaagg gactctggtc actgtctctg // LOCUS MUSIGHACR 286 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig H-chain mRNA VDJ-region, partial cds. ACCESSION M34733 KEYWORDS diversity exon; immunoglobulin heavy chain; joining exon; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H220-17, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 286) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 286 Ig H-chain VDJ-region (AA at 1) recomb 234 235 V-region end/D-region start recomb 238 239 D-region end/J-region start BASE COUNT 74 a 70 c 68 g 74 t ORIGIN 1 acttctgggt tcaccttcac tgattactac atgagctggg tccgccagcc tccaggaaag 61 gcacttgagt ggttgggttt tattagaaac aaagctaatg gttacacaac agagtacagt 121 gcatctgtga agggtcggtt caccatctcc agagataatt cccaaagcat cctctatctt 181 caaatgaaca ccctgagagc tgaggacagt gccacttatt actgtgcaag agatcaacgc 241 ctggtttgct tactggggcc aagggactct ggtcactgtc tctgca // LOCUS MUSIGHACS 354 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig H-chain mRNA VDJ-region, partial cds. ACCESSION M34734 KEYWORDS diversity exon; immunoglobulin heavy chain; joining exon; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H36-12, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 354) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 354 Ig H-chain VDJ-region (AA at 1) recomb 303 304 V-region end/D-region start recomb 311 312 D-region end/J-region start BASE COUNT 85 a 79 c 93 g 90 t 7 others ORIGIN 1 gaggtgaagt tggtggagtc tggaggaggc ttggtacagc ctgggggttc tctgagactc 61 tcctgtgcaa cctctggttt taccttcacg aattactaca tgnnnnnnnt ccgccagcct 121 ccaggaaagg cacttgagtg gttgggtgtt attagaaaca aagctaatgg tgacacaaca 181 gagtataatg catctgtgaa gggtcggttc accatctcca gagataattc ccaaagcatc 241 ctctatcttc aaatgaacac cctgagagct gaggacagtg ccacttatta ctgtgcaaga 301 gatagcggtc cgtttgctta ctggggccaa gggactctgg tcactgtctc tgca // LOCUS MUSIGHACT 312 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig H-chain mRNA VDJ-region, partial cds. ACCESSION M34735 KEYWORDS diversity exon; immunoglobulin heavy chain; joining exon; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H220-3, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 312) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 312 Ig H-chain VDJ-region (AA at 2) recomb 262 263 V-region end/D-region start recomb 268 269 D-region end/J-region start BASE COUNT 95 a 69 c 73 g 75 t ORIGIN 1 gcctaaaggg tcattgaaac tctcatgtgc agcctctgga ttcaccttca ataccaatgc 61 catgaactgg gtccgccagg ctccaggaaa gggtttggaa tgggttgctc gcataagaag 121 taaaagtaat aattatgcaa catattatgc cgattcagtg aaagacaggt tcaccatctc 181 cagagatgat tcacaaagca tgctctatct gcaaatgaac aacttgaaaa ctgaggacac 241 agccatgtat tactgtgtga gagcggcgta ctatgctatg gactactggg gtcaaggaac 301 ctcagtcacc gt // LOCUS MUSIGHACU 353 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig H-chain mRNA VDJ-region, partial cds. ACCESSION M34736 KEYWORDS diversity exon; immunoglobulin heavy chain; joining exon; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H230-7, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 353) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 353 Ig H-chain VDJ-region (AA at 1) recomb 294 295 V-region end/D-region start recomb 308 309 D-region end/J-region start BASE COUNT 87 a 83 c 100 g 83 t ORIGIN 1 gaagtgcagc tggtggagtc tgggggaggc ttagtgaagc ctggagggtc cctgaaactc 61 tcctgtgcag cctctggatt cactttcagt gactattaca tgtattgggt tcgccagact 121 ccggaaaaga ggctggagtg ggtcgcaacc attagtgatg gtggtagtta cacctactat 181 ccagacagtg tgaaggggcg attcaccatc tccagagaca atgccaagaa caacctgtac 241 ctgcaaatga gcagtctgaa gtctgaggac acagccatgt attactgtgc aaggtacggg 301 acccttattg ctatggacta ctggggtcaa ggaacctcag tcaccgtctc ctc // LOCUS MUSIGHACV 351 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig H-chain mRNA VDJ-region, partial cds. ACCESSION M34737 KEYWORDS diversity exon; immunoglobulin heavy chain; joining exon; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H35-D1, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 351) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 351 Ig H-chain VDJ-region (AA at 1) recomb 294 295 V-region end/D-region start recomb 300 301 D-region end/J-region start BASE COUNT 89 a 82 c 99 g 81 t ORIGIN 1 gaagtgcagc tggtggagtc tgggggaggc ttagtgaagc ctggagggtc cctgaaactc 61 tcctgtgcag cctctggatt cactttcagt gactattaca tgtattgggt tcgccagact 121 ccggaaaaga ggctggagtg ggtcgcaacc attagtgatg gtggtagtta cacctactat 181 ccagacagtg tgaaggggcg attcaccatc tccagagaca atgccaagaa caacctgtac 241 ctgcaaatga gcagtctgaa gtctgaggac acagccatgt attactgtgc aaggtattac 301 tacggtagga ttgactactg gggccaaggc accactctca cagtctccgc a // LOCUS MUSIGHACW 348 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig H-chain mRNA VDJ-region, partial cds. ACCESSION M34738 KEYWORDS diversity exon; immunoglobulin heavy chain; joining exon; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma L11-1A1, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 348) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 348 Ig H-chain VDJ-region (AA at 1) recomb 291 292 V-region end/D-region start recomb 309 310 D-region end/J-region start BASE COUNT 84 a 97 c 80 g 87 t ORIGIN 1 gatgtgcagc ttcaggagtc gggacctggc ctggtgaaac cttctcagtc tctgtccctc 61 acctgcactg tcactggcta ctcaatcacc agtgattatg cctggaactg gatccggcag 121 tttccaggaa acaagctgga gtggatgggc tacataaact acagtggtta cactacctac 181 aacccatctc tcaaaagtcg aatctctatc actcgagaca catccaagga ccagttcttc 241 ctgcagttga attctgtgac tactgaggac acagccacat attactgtgc attactacgg 301 ctacgtgcgg cttactgggg ccaagggact ctggtcactg tctctgca // LOCUS MUSIGKACN 341 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34739 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H144-17B7, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 341) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 341 Ig kappa-chain VJ-region (AA at 1) recomb 302 303 V-region end/J-region start BASE COUNT 92 a 83 c 87 g 79 t ORIGIN 1 gacattgtga tgacacagtc tccatcctcc ctgactgtga cagcaggaga gaaggtcact 61 atgagctgca agtccagtca gagtctgtta aacagtggaa atcaaaagaa ctacttgacc 121 tggtaccagc agaaaccagg gcagcctcct aaactgttga tctactgggc atccactagg 181 gaatctgggg tccctgatcg cttcacaggc agtggatctg gaacagattt cactctcacc 241 atcagcagtg tgcaggctga agacctggca gtttattact gtcagaatga ttatagttat 301 ccgctcacgt tcggtgctgg gaccaagctg gagctgaaac g // LOCUS MUSIGKACO 341 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34740 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H230-7, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 341) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 341 Ig kappa-chain VJ-region (AA at 1) recomb 302 303 V-region end/J-region start BASE COUNT 92 a 82 c 87 g 79 t 1 others ORIGIN 1 gacattgtga tgacacagtc tccatcctcc ctgactgtga cagcaggaga gaaggtcact 61 atgagctgca agtccagtca gagtctgtta aacagtggaa atcaaaagaa ctacttgacc 121 tggtaccagc agaaaccagg gcagcctcct aaactgttga tctactgggc atccactagg 181 gaatctgggg tccctgatcg cttcacaggc agtggatctg gaacagattt cactctcacc 241 atnagcagtg tgcaggctga agacctggca gtttattact gtcagaatga ttatagttat 301 ccgctcacgt tcggtgctgg gaccaagctg gagctgaaac g // LOCUS MUSIGKACP 338 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34741 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H210-56, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 338) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 338 Ig kappa-chain VJ-region (AA at 1) recomb 302 303 V-region end/J-region start BASE COUNT 91 a 82 c 86 g 79 t ORIGIN 1 gacattgtga tgacacagtc tccatcctcc ctgactgtga cagcaggaga gaaggtcact 61 atgagctgca agtccagtca gagtctgtta aacagtggaa atcaaaagaa ctacttgacc 121 tggtaccagc agaaaccagg gcagcctcct aaactgttga tctactgggc atccactagg 181 gaatctgggg tccctgatcg cttcacaggc agtggatctg gaacagattt cactctcacc 241 atcagcagtg tgcaggctga agacctggca gtttattact gtcagaatga ttatagttat 301 ccgctcacgt tcggtgctgg gaccaagctg gagctgaa // LOCUS MUSIGKACQ 341 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34742 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H220-17, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 341) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 341 Ig kappa-chain VJ-region (AA at 1) recomb 303 304 V-region end/J-region start BASE COUNT 92 a 83 c 86 g 80 t ORIGIN 1 gacattgtga tgacacagtc tccatcctcc ctgactgtga cagcaggaga gaaggtcact 61 atgagctgca agtccagtca gagtctgtta aacagtggaa atcaaaagaa ctacttgacc 121 tggtaccagc agaaaccagg gcagcctcct aaactgttga tctactgggc atccactagg 181 gaatctgggg tccctgatcg cttcacaggc agtggatctg gaacagattt cactctcacc 241 atcagcagtg tgcaggctga agacctggca gtttattact gtcagaatga ttatagttat 301 cctctcacgt tcggtgctgg gaccaagctg gagctgaaac g // LOCUS MUSIGKACR 341 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34743 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H220-3, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 341) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 341 Ig kappa-chain VJ-region (AA at 1) recomb 304 305 V-region end/J-region start BASE COUNT 96 a 81 c 84 g 80 t ORIGIN 1 gacattgtga tgacacagtc tccatcctcc ctgactgtga cagcaggaga gaaggtcact 61 atgagctgca agtccagtca gagtctgtta aacagtggaa atcaaaagaa ctacttgacc 121 tggtaccagc agaaaccagg gcagcctcct aaactgttga tctactgggc atccactagg 181 gaatctgggg tccctgatcg cttcacaggc agtggatctg gaacagattt cactctcacc 241 atcagcagtg tgcaggctga agacctggca gtttattact gtcagaatga ttatagttat 301 cctctcacgt tcggctcggg gacaaagttg gaaataaaac g // LOCUS MUSIGKACS 335 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34744 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H35-D1, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 335) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 335 Ig kappa-chain VJ-region (AA at 1) recomb 302 303 V-region end/J-region start BASE COUNT 89 a 82 c 84 g 79 t 1 others ORIGIN 1 gacattgtga tgacacagtc tccatcctcc ctgactgtga cagcaggaga gaaggtcact 61 atgagctgca agtccagtca gagtctgtta aacagtggaa atcaaaagaa ctacttgacc 121 tggtaccagc agaaaccagg gcagcctcct aaactgttga tctactgggc atccactagg 181 gaatctgggg tccctgatcg cttcacaggc agtggatctg gaacagattt cactctcacc 241 atcagcagtg tgcaggctga agacctngca gtttattact gtcagaatga ttatagttat 301 ccgctcacgt tcggtgctgg gaccaagctg gagct // LOCUS MUSIGKACT 333 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34745 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma L11-1A1, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 333) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 333 Ig kappa-chain VJ-region (AA at 1) recomb 296 297 V-region end/J-region start BASE COUNT 90 a 80 c 86 g 77 t ORIGIN 1 gtgatgacac agtctccatc ctccctgact gtgacagcag gagagaaggt cactatgagc 61 tgcaagtcca gtcagagtct gttaaacagt ggaaatcaaa agaagtactt gacctggtac 121 cagcagaaac cagggcagcc tcctaaactg ttgatctact gggcatccac tagggaatct 181 ggggtccctg atcgcttcac aggcagtgga tctggaacag atttcactct caccatcagc 241 agtgtgcagg ctgaagacct ggcagtttat tactgtcaga atgattatag ttatccgctc 301 acgttcggtg ctgggaccaa gctggagctg aaa // LOCUS MUSIGKACU 339 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34746 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma IC5-2A6, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 339) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 339 Ig kappa-chain VJ-region (AA at 1) recomb 303 304 V-region end/J-region start BASE COUNT 92 a 80 c 84 g 83 t ORIGIN 1 gacattgtga tgacacagtc tccatcttcc ctgactgtga cagcaggaga gaaggtcact 61 atgagctgca agtccagtca gagtctgtta aacagtggaa atcaaaagaa cttcttgacc 121 tggtaccagc agaaaccagg acagtctcct aaactgttga tctactgggc atccactagg 181 gaatctgggg tccctgatcg cttcacaggc agtggatctg gaacagattt cactctcacc 241 atcagcagtg tgcaggctga agacgtggca gtttattact gtcagaatga ttatacttat 301 cctctcacgt tcggtgctgg gaccaagctg gagctgaaa // LOCUS MUSIGKACV 318 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34747 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H36-8, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 318) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 318 Ig kappa-chain VJ-region (AA at 2) recomb 283 284 V-region end/J-region start BASE COUNT 85 a 79 c 77 g 77 t ORIGIN 1 tccatcctcc ctgactgtga cagcaggaga gaaggtcact atgagttgca agtccagtca 61 gagtctctta aacagtggaa ctcaaaagaa ctacttgacc tggtaccagc agaaaccagg 121 gcagcctcct aaactattga tctactgggc atccactagg gaatctgggg tccctgatcg 181 cttcacaggc agtggatctg gaacagattt cactctcacc atcatcagtg tgcagactga 241 agacctggca gtttatttct gtcagaatga ttatagttat ccgctcacgt tcggtgctgg 301 gaccaagctg gagctgaa // LOCUS MUSIGKACW 246 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34748 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H36-12, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 246) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 246 Ig kappa-chain VJ-region (AA at 2) recomb 211 212 V-region end/J-region start BASE COUNT 64 a 64 c 59 g 59 t ORIGIN 1 ccgtggaaat caaaagaact acttgacctg gtaccagcag aaaccagggc agcctcctaa 61 actcttaatc tactgggcat ccactaggga atctggggtc cctgatcgct tcacaggcag 121 tggatctgga acagatttca ctctcaccat cagcagtgtg cgggctgaag acctggcagt 181 ttattactgt cagaatgatt atcattatcc gctcactttc ggtgctggga ccaagctgga 241 cctgaa // LOCUS MUSIGKACX 176 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse Ig rearranged kappa-chain mRNA VJ-region, partial cds. ACCESSION M34749 KEYWORDS immunoglobulin light chain; joining exon; kappa-chain; processed gene; variable region. SOURCE Mouse (strain BALB/c) adult spleen anti-HA hybridoma H37-41, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 176) AUTHORS Clarke,S.H., Staudt,L.M., Kavaler,J., Schwartz,D., Gerhard,W.U. and Weigert,M.G. TITLE V region gene usage and somatic mutation in the primary and secondary responses to influenza virus hemagglutinin JOURNAL J. Immunol. 144, 2795-2801 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 176 Ig kappa-chain VJ-region (AA at 1) recomb 138 139 V-region end/J-region start BASE COUNT 41 a 45 c 47 g 43 t ORIGIN 1 tgggcatcca ctagggaatc tggggtccct gatcgcttca caggcagtgg atctggaaca 61 gatttcactc tcaccatcac caatgtgcag gctgaagacc tggcagttta ttactgtcag 121 aatgattaca cttatccgct cacgttcggt gctgggacca agctggagct gagacg // LOCUS MUSMHH2A 876 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse MHC class I H-2K-kml mRNA (H-2K-kml haplotype), partial cds. ACCESSION M34932 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex. SOURCE Mouse (strain CBA.M523) lymphoma cell line RDM-4, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 876) AUTHORS Martinko,J.M., Solheim,J.C. and Geliebter,J. TITLE The H-2K-km1 mutation: A single nucleotide substitution is responsible for multiple functional differences in a class I MHC molecule JOURNAL Mol. Immunol. 25, 267-274 (1988) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 876 MHC H-2K-kml mRNA (AA at 1) BASE COUNT 180 a 255 c 286 g 155 t ORIGIN 1 ggcccacatt cgctgaggta tttccacacc gccgtgtccc ggcccggcct cgggaagccc 61 cggttcatct ctgtcggcta cgtggacgac acgcagttcg tgcgcttcga cagcgacgcg 121 gagaatccga ggtatgagcc gcgggtgcgg tggatggagc aggtggagcc cgagtattgg 181 gagcggaaca cgcagatcgc caagggcaat gagcagattt tccgagtgaa cctgaggacc 241 gcgctgcgct actacaacca gagcgcgggc ggctctcaca cgttccaacg gatgtacggc 301 tgtgaggtgg ggtcggactg gcgcctcctc cgcgggtacg agcagtacgc atacgacggc 361 tgcgattaca tcgccctgaa cgaagacctg aaaacgtgga cggcggccga catggcggcg 421 ctgatcacca aacacaagtg ggagcaggct ggtgctgcag agagagaccg ggcctacctg 481 gagggcacgt gcgtggagtg gctccgcaga tacctgcagc tcgggaacgc gacgctgccg 541 cgcacagatt ccccaaaggc ccatgtgacc cgtcacagca gacctgaaga taaagtcacc 601 ctgaggtgct gggccctggg cttctaccct gctgacatca ccctgacctg gcagttgaat 661 ggggaggagc tgacccagga catggagctt gtggagacca ggcctgcagg ggatggaacc 721 ttccagaagt gggcatctgt ggtggtgcct cttgggaagg agcagtatta cacatgccat 781 gtgtaccatc aggggctgcc tgagcccctc accctgagat gggagcctcc tccatccact 841 gtctccaaca cggtaatcat tgctgttctg gttgtc // LOCUS PEALEGAB 137 bp ss-mRNA PLN 21-JUL-1990 DEFINITION P.sativum legumin mRNA, 3' flank. ACCESSION M34908 KEYWORDS legumin; storage protein. SOURCE P.sativum, cDNA to mRNA, clones pDUB[1,3]. ORGANISM Pisum sativum Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Rosidae; Rosales; Fabaceaea. REFERENCE 1 (bases 1 to 137) AUTHORS Lycett,G.W., Delauney,A.J. and Croy,R.R.D. TITLE Are plant genes different? JOURNAL FEBS Lett. 153, 43-46 (1983) STANDARD simple staff_review FEATURES from to/span description mRNA < 1 137 legumin mRNA BASE COUNT 53 a 20 c 24 g 40 t ORIGIN 1 tagatttcgc accaaatcaa tgaaagtaat gaataagaaa actaaggctt agatgccttt 61 gttacttgtg taaaataact cgagtcatgt acctttttgc ggaaacagaa taaataaaag 121 gtaaaatttc agtgctc // LOCUS PEAVICA 81 bp ss-mRNA PLN 21-JUL-1990 DEFINITION P.sativum vicilin mRNA, 3' flank. ACCESSION M34909 KEYWORDS storage protein; vicilin. SOURCE P.sativum, cDNA to mRNA, clone pDUB2. ORGANISM Pisum sativum Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Rosidae; Rosales; Fabaceaea. REFERENCE 1 (bases 1 to 81) AUTHORS Lycett,G.W., Delauney,A.J. and Croy,R.R.D. TITLE Are plant genes different? JOURNAL FEBS Lett. 153, 43-46 (1983) STANDARD simple staff_review BASE COUNT 32 a 11 c 13 g 25 t ORIGIN 1 taatgagaga tcaaatattt tgcatgtatg ctataaagaa ctatagctca taatgagcaa 61 ggaataaaac atcgttctct t // LOCUS ECOALKPH 52 bp ds-DNA SYN 21-JUL-1990 DEFINITION Synthetic E.coli alkaline phosphatase gene, partial cds. ACCESSION M34498 KEYWORDS alkaline phosphatase. SOURCE E.coli (strain AW1043) DNA. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 52) AUTHORS Chou,M.M. and Kendall,D.A. TITLE Polymeric sequences reveal a functional interrelationship between hydrophobicity and length of signal peptides JOURNAL J. Biol. Chem. 265, 2873-2880 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 52 synthetic alkaline phosphatase precursor (AA at 1) sigp < 1 > 52 synthetic alkaline phosphatase precursor signal peptide BASE COUNT 9 a 15 c 10 g 18 t ORIGIN 1 tcgactctgc ttctgctgct cttgctgtta ctgttaaccc ctgtgacaaa ag // LOCUS ECOALKPHX 52 bp ds-DNA SYN 21-JUL-1990 DEFINITION Synthetic E.coli alkaline phosphatase gene, partial cds. ACCESSION M34499 KEYWORDS alkaline phosphatase. SOURCE E.coli (strain AW1043) DNA. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 52) AUTHORS Chou,M.M. and Kendall,D.A. TITLE Polymeric sequences reveal a functional interrelationship between hydrophobicity and length of signal peptides JOURNAL J. Biol. Chem. 265, 2873-2880 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 52 synthetic alkaline phosphatase precursor (AA at 1) sigp < 1 > 52 synthetic alkaline phosphatase precursor signal peptide BASE COUNT 8 a 10 c 17 g 17 t ORIGIN 1 tcgactgtcg tggttgtcgt agttgtggtg gtcgttaccc ctgtgacaaa ag // LOCUS ECOALKPHXX 52 bp ds-DNA SYN 21-JUL-1990 DEFINITION Synthetic E.coli alkaline phosphatase gene, partial cds. ACCESSION M34500 KEYWORDS alkaline phosphatase. SOURCE E.coli (strain AW1043) DNA. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 52) AUTHORS Chou,M.M. and Kendall,D.A. TITLE Polymeric sequences reveal a functional interrelationship between hydrophobicity and length of signal peptides JOURNAL J. Biol. Chem. 265, 2873-2880 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 52 synthetic alkaline phosphatase precursor (AA at 1) sigp < 1 > 52 synthetic alkaline phosphatase precursor signal peptide BASE COUNT 10 a 18 c 17 g 7 t ORIGIN 1 tcgactgcag cagctgcagc tgcggctgcc gcggcgaccc ctgtgacaaa ag // LOCUS ECOALKPHY 52 bp ds-DNA SYN 21-JUL-1990 DEFINITION Synthetic E.coli alkaline phosphatase gene, partial cds. ACCESSION M34501 KEYWORDS alkaline phosphatase. SOURCE E.coli (strain AW1043) DNA. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 52) AUTHORS Chou,M.M. and Kendall,D.A. TITLE Polymeric sequences reveal a functional interrelationship between hydrophobicity and length of signal peptides JOURNAL J. Biol. Chem. 265, 2873-2880 (1990) STANDARD simple staff_review FEATURES from to/span description pept < 1 > 52 synthetic alkaline phosphatase precursor (AA at 1) sigp < 1 > 52 synthetic alkaline phosphatase precursor signal peptide BASE COUNT 8 a 11 c 25 g 8 t ORIGIN 1 tcgactggcg gtgggggcgg cggaggtggt ggcggtaccc ctgtgacaaa ag // LOCUS CPCURA5A 2029 bp ds-DNA BCT 21-JUL-1990 DEFINITION C.neoformans orotidine monophosphate pyrophosphorylase (URA5) gene, complete cds. ACCESSION M34606 KEYWORDS orotidine monophosphate pyrophosphorylase. SOURCE C.neoformans (strain B-3501) asexual phase cell line B-3501 DNA, clone pURA5g2. ORGANISM Cryptococcus neoformans Eukaryota; Plantae; Thallobionta; Basidiomycotina; Deuteromycotina; Filobasidiales. REFERENCE 1 (bases 1 to 2029) AUTHORS Edman,J.C. and Kwon-Chung,K.J. TITLE Isolation of the URA5 gene from Cryptococcus neoformans var neoformans and its use as a selective marker for transformation JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.C.Edman, 29-MAY-1990. Author address: J.C.Edman University of California San Francisco Hormone Research Institute San Francisco, CA 94143-0534 email: edman@socrates.ucsf.edu FEATURES from to/span description pept 714 814 orotidine monophosphate pyrophosphorylase (URA5), exon 1 (E.C. 2.4.2.10) 867 1095 orotidine monophosphate pyrophosphorylase, exon 2 1145 1492 orotidine monophosphate pyrophosphorylase, exon 3 pre-msg < 714 1527 URA5 mRNA and introns IVS 815 866 URA5 intron A IVS 1096 1144 URA5 intron B BASE COUNT 512 a 515 c 479 g 523 t ORIGIN 1 gatcttgggg atggtattga agacgatcca gaaaaagtct ctccatccct cccacgttcg 61 ctgttcggtt tctttgcaaa gagcgaagtt gctcgacctt tgacagaccc taaaatctgg 121 tcgtattttg cgttcaaaga tcgcttactg cgaccgcgat tttttagagg tggatttttt 181 gttgcgagac tagcgcatcg gataggcatg ggtgatatac gtttgcgttc cttatgaggg 241 gtatcatcag tggcaaatta ccgactagat gaagaagacg acctacaccc cgctaaccgg 301 tgtccgatcg acatgatcca cggtgtccaa agcgaagaag gacatgatga ttggagttcg 361 cttacctttg gtataaacca gtgttgtttc tgaagaggtg aggaagaaaa tgatctaggg 421 caataacaga aatcgtttga agaagaagta aaagaaaaga cacacgtcag acaagcatca 481 tcatcattca ttttgaatac tcatcacggc accttcttcc ttgcatgcgc attattcatg 541 atgagatgct cgcagccgcc ggatttcggc tgcaatcaag aacgatatcg cgtacggcga 601 tgtccgcctc cactccatct tccaacaacc accacagtgc ccgataacac tacgacgaaa 661 attgttcttt tttggatctt gtcgacaacg gcgaccaaaa caagaacttg atcatgtcct 721 cccaagccct cgactccgcc aaagttgcct tcatcgaggc tgccatcgaa catggcgtgc 781 ttcttttcgg caactttacc ttgaagtccg gccggtgagc catattgcag cgcttcacag 841 tccaatcgaa tctgacatgt gttcagccaa tccccttact tcttcaatgc cggtctcctt 901 tactcttcat cgcttctctc aactaccgct caggcttacg ccaaggtact ttcctcttct 961 aggattcctg actttgacgt cctcttcggc ccagcttaca agggtatctc cttggctgct 1021 gtctccgctg taagccttta tcagcaaacc ggcaaagata tcggctactg ctacaacagg 1081 aaggagaaga aggacgtgag tctgtcctaa ccagtgcgac agcgatgagc tcataagcca 1141 gtagcacggt gagggcggta ctatggtcgg tgcgcctctc aagggacgaa tcgtcatcat 1201 cgacgatgtt ctcacctctg gcaaggccat ccgtgaagct attgacattc tcaaggcctc 1261 ccctgaagcg aagcttgtcg gaattgtcca gcttgtcgac agacaagaga aaggccagag 1321 cggtagcggc aagagtaccg tacaggaggt tgaggaagag ttcggtgtgc ctgtcgagcc 1381 tattattggt ttggacgaca ttgtgaagta cttagaaagc tccggcaagt gggaaaagga 1441 gctgcaagag gtcaggaagt acagggcgga gtacggtgtt cagaggtctt aagggttttc 1501 ttcttaaatg cacgggttta ggtctagcta atcaagttcc gacatattac aagtttgtaa 1561 gcttgtatca aaggaactta agtacaggca ggcgtcctga ggcgacaaag gaagctgtaa 1621 tatgattgtt ggctgtcaat cttcatcgta tctactttgt caatactgac ttcaatgacc 1681 caataataca attttattag tgttgaccca gaatggttag caggaaactc cccttctctt 1741 cctctcaatc ccaatcatac ttcatatctc ctgctccccc catttccgtc ttcctcgatg 1801 actccctggt cccatccctc ccacctcctg gaggcaagct ggagcacctg gacctaatgg 1861 gtcgtcgccc caaattgcct ccacctctta agacaatcat cgtccaatca aactctgaac 1921 tatcttccaa gccaatggcc ggatctggac acaagatgat gtcgaagccg cttgatgtgc 1981 cagggttggt ccgtggcctg gagacgtaag agcgggtagt actgggatc // LOCUS ECOCHEA 2190 bp ds-DNA BCT 21-JUL-1990 DEFINITION E.coli cheA protein (complete cds), motB protein (3' end), and cheW protein (5' end) genes. ACCESSION M34669 KEYWORDS cheA gene; cheW gene; motB gene. SOURCE E.coli (strain K12) DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 2190) AUTHORS Kofoid,E.C. and Parkinson,J.S. TITLE Tandem translational starts in the cheA locus of E.coli JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by E.C.Kofoid, 01-JUN-1990. Author address: E.C.Kofoid University of Utah Dept of Biology Salt Lake City, UT 84112 email: kofoid@bioscience.utah.edu FEATURES from to/span description pept < 1 104 MotB protein pept 109 2073 CheA protein (alt.) pept 400 2073 CheA protein (alt.) pept 2094 > 2190 CheW protein BASE COUNT 575 a 546 c 609 g 460 t ORIGIN 42 min on K12 map. 1 atgaaaacgc cgaaagccag aatgagccag taagcgccct ggaaaaacct gaggttgcac 61 cacaggtcag tgttcccaca atgccatcag ccgaaccgag gtgacagcgt gagcatggat 121 ataagcgatt tttatcagac attttttgat gaagcggacg aactgttggc tgacatggag 181 cagcatttgc tggttttgca gccggaagcg ccagatgccg aacaattgaa tgccatcttt 241 cgggctgccc actcgatcaa aggaggggca ggaacttttg gcttcagcgt tttgcaggaa 301 accacgcatc tgatggaaaa cctgctcgat gaagccagac gaggtgagat gcaactcaac 361 accgacatta tcaatctgtt tttggaaacg aaggacatca tgcaagaaca gctcgacgct 421 tataaacagt cgcaagagcc ggatgccgcc agcttcgatt atatctgcca ggccttgcgt 481 caactggcat tagaagcgaa aggcgaaacg ccatccgcag tgacccgatt aagtgtggtt 541 gccaaaagtg aaccgcaaga tgagcagagt cgcagtcagt cgccgcgacg aattatcctt 601 tcgccgctga aggccgggga agtcgacctg ctggaagaag aactgggaca tctgacaacg 661 ttaactgacg tggtgaaagg ggcggattcg ctctcggcaa tattaccggg cgacatcgcc 721 gaagatgaca tcacagcggt actctgtttt gtgattgaag ccgatcagat tacctttgaa 781 acagtagaag tctcgccaaa aatatccacc ccaccagtgc ttaaactggc agccgaacaa 841 gcgccaaccg gccgcgtgga gcgggaaaaa acgacgcgca gcaatgaatc caccagcatc 901 cgtgtagcgg tagaaaaggt tgatcaatta attaacctcg tcggcgagct ggttatcacc 961 cagtccatgc ttgcccagcg ttccagcgaa ctggacccgg ttaatcatgg tgatttgata 1021 accagcatgg ggcagttaca acgtaacgcc cgtgatttgc aggaatcagt gatgtcgatt 1081 cgcatgatgc cgatggaata tgtttttagt cgctatcccc ggctggtgcg tgatctggcg 1141 ggaaaactcg gcaagcaggt agaactgacg ctggtgggca gttctactga actcgacaaa 1201 agcctgatag aacgcattat cgacccgctg acccacctgg tacgcaatag cctcgatcac 1261 ggtattgaac tgccagaaaa acggctcgcc gcaggtaaaa acagcgtcgg aaatttaatt 1321 ctgtctgccg aacatcaggg cggcaacatt tgcattgaag tgaccgacga tggggcgggg 1381 ctaaaccgtg agcgaattct ggcaaaagcg gcctcgcaag gtttgactgt cagcgaaaac 1441 atgagcgacg acgaagtcgc gatgctgata tttgcacctg gcttctccac ggcagagcag 1501 gtcaccgacg tctccgggcg cggcgtcggc atggacgtcg ttaaacgtaa tatccagaag 1561 atgggcggtc atgtcgaaat ccagtcgaag cagggtactg gcactacgat ccgcatttta 1621 ctgccgctga cgctggccat cctcgacggc atgtccgtac gcgttgcgga tgaagttttc 1681 attctgccgc tgaatgctgt tatggaatca ctgcaacccc gtgaagccga tctccatcca 1741 ctggccggcg gcgagcgggt gctggaagtg cggggtgaat atctgcccat cgtcgaactg 1801 tggaaagtgt tcaacgtcgc gggcgcgaaa accgaagcca cccagggaat tgtggtgatc 1861 ttacaaagtg gcggtcgccg ctacgccttg ctggtggatc aattaattgg tcaacaccag 1921 gttgtggtta aaaaccttga aagtaactat cgcaaagtcc ccggcatttc tgctgcgacc 1981 attcttggcg acggcagcgt ggcactgatt gttgatgtct ccgccttgca ggcgataaac 2041 cgcgaacaac gtatggcgaa caccgccgcc tgaatgagta aaaaggtaac aatatgaccg 2101 gtatgacgaa tgtaacaaag ctggccagcg agccgtcacg gcaggaattt ctggtattta 2161 cccttggtga tgaagagtac ggtattgatg // LOCUS HAMHSP60A 2726 bp ds-DNA ROD 21-JUL-1990 DEFINITION C.griseus chaperonin (HSP60) non-functional pseudogene. ACCESSION M34562 KEYWORDS chaperonin; pseudogene. SOURCE C.griseus cell line CHO DNA, clone GC-1. ORGANISM Cricetulus griseus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetini. REFERENCE 1 (bases 1 to 2726) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. TITLE Nucleotide sequence and novel structural features of human and Chinese hamster HSP60 (chaperonin) gene families JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 29-MAY-1990. Author address: R.S.Gupta McMaster University Dept of Biochemistry 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN%GUPTAR.@SSCVAX.McMASTER.CA FEATURES from to/span description IVS 1738 1824 HSP60 intron A BASE COUNT 915 a 513 c 579 g 719 t ORIGIN 1 catggtgatt tttctttaga tattctgggc ctcctgaaac tgacaagatt ctgtaaagca 61 aaagacataa tcaacaagat aagacagcag tgcaaacaat gggaaaagtt cttcaccaac 121 cccatatcta gccaagggca aatttctaaa acatacaaag aactgatgaa agcagtcaac 181 aaaacaccaa ataatcgccc tcactctccg ccaccagcct gctttgccag atgagaccag 241 tgtcccgggc gctggctcct catgtcactc gggcctatgc caatgatgta aaatgtgggg 301 caaatccttg atccttaaag cttcaagttg tagacctttt agccgatgct gtagctgtta 361 caatggggcc aaagggaaga acagtgatta ttgaacagag ttgaggaagt cccaaagtaa 421 caaaagatgg ggtcattttt acaaaggcaa ttgatctaaa ggatacatac aaataatatc 481 agagctaaac ttgttcaagt tgttgccaat aactcaaatg aagaggctgg gatggcacta 541 ccactgctac tgttctggca agttctattg ccaacgaagg ctttgagaag atcagcaaag 601 ggtctaatcc agtagaaatc tggagaagtg tgatgttggc tgttgatgct gtaattgctg 661 aactaacaaa acaatctaaa catgtgacaa cccatgaaga aatttctcag gttgctacaa 721 tttctgcaaa tggacacata gacattggaa acatcatatc tgatgcaatg aaacatgttg 781 gagggaaaga cgtcatcaca ctgaaggata gaaataccct gaatgatgaa ttagaaatta 841 ttggaggcat gaagtttgaa agaagatgta tttctcagac atcaataagt caaaaatgtg 901 aattccaaga tgcctatgtt ctattgagtg aaaagaaaat ttctattgtc gagcccatta 961 ctgctcatag gaaacaaatg gtgatatttg ctgaagatgt tgatggagaa gctctaagca 1021 cactggtttt gaacaggcta aaagctggtc ttcagatcgt agcagttaaa gctccaggtt 1081 tttggggaca ataggaagaa taagcttaaa gatacggcta ttgctactga tggtgagcaa 1141 tttggagaac aggggctaaa actaaatatt gatgatggtc aagttcatga tttaggaaaa 1201 tttggagagg tcattgtccc caaagatgat gccatgcttt tgaaaggaac tgatgactaa 1261 actcaaattg agaaaccaat tcaagaaatc actaagcagc tagacatcac aactagtgaa 1321 tatgaaaagg aaaagctaaa cgaaacactt gctaaacttt cagatggtgc agctgtgttt 1381 aaggttggag gaacaaggga tgttgaagtg aaggagaaga aagacagagt tacaaatgct 1441 ctcaatgcta caagagcagc tgttgaaaag ggcattgttt taggacttag ctgtgctctg 1501 cctctgtgca tcccagcctt ggattcctta aagccttcaa atgaagatca gaaaataggt 1561 atagaaatta ttaaaagagc actcaaaatt cctgcagtga caattgctga gaatgcaggt 1621 gttgaataat ctttgagagt tgagaaaatt ctgcagggtt cctagggagt tggttattag 1681 gctatgcccg caaattttgt gaacatggta gaaaaaggaa tcattaatcc aacaaaggta 1741 aatgagtcag caattcttaa acattggatg gcttgttcta tggtatgtgt tttcattaat 1801 cattttataa acattttttt gtaggttgta agaactgctt tagtagatgc ctccttgcta 1861 acttcagcag aagctgtagt gacagaaatt ccaaaagaag agaaggacct tggaatgcgc 1921 acacatgcct ttaatcctag cacttgcgag gcagaggcag gcagatatct gtgagttcga 1981 ggccagcctg gactccggag tgagtgccag gatagtctcc aaagctatcc aaagagaaac 2041 cctgtcttga aaaacaaaca aacaaaaaag acatttgtac attcctgaaa aaaacccaaa 2101 taatccaatt aaactagggg tcagcctaat aaagataccc gaataggttt ttacatctta 2161 agagaaaaat ctactaataa atgacttgga gcaggtcctt cacagacaat atttagtgag 2221 agtaggtagc ctcatgtggg ttagtagttc cagttgcttc aaaatgccct caccttttgt 2281 cataggctca tgtggaggat ctactccatt ggatggtgat attaaaagta gcacatgggt 2341 acatgcctta agatattaag atccccaagt aaaaactgca tctcagatgc tctctgtttc 2401 ttgggccatg atatgggcag tgagatttct gtcacacttg ccaggaaaca cttatgatct 2461 gtctgtcaca atctcttata ttgtcaagta cttaaccaaa cacaatcacc catgacctct 2521 catatcctcc tggacttaga caggaggcac aagtctactc aggtataaat atttttactt 2581 ctgatgcccc acagtaacct acaatggctt cagtccagta cacaggtaag taaacccacc 2641 aatataccat tccagctgat tgataacctc ttagatacat cccatatgct gcagttccca 2701 aatggagaca acccaaagtt tcttga // LOCUS HAMHSP70A 2243 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Chinese hamster heat shock protein (cognate form of hsp70) mRNA, complete cds. ACCESSION M34561 KEYWORDS heat shock protein; stress protein. SOURCE Chinese hamster cell line CHO, cDNA to mRNA, clone RS 23. ORGANISM Cricetulus griseus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetini. REFERENCE 1 (bases 1 to 2243) AUTHORS Ahmad,S., Ahuja,R., Venner,T.J. and Gupta,R.S. TITLE Identification of a protein altered in mutants resistant to microtubule inhibitors with the constitutive form of the major heat shock protein (hsp70) JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 29-MAY-1990. Author address: R.S.Gupta McMaster University Dept of Biochemistry 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN% GUPTAR@,SSCVAX.McMASTER.CA FEATURES from to/span description pept 50 1990 heat shock protein (hsp70) mRNA < 1 2243 hsp70 mRNA signal 2220 2225 poly-A signal BASE COUNT 654 a 486 c 551 g 552 t ORIGIN 1 gttttgtgtg gtctcgtcgc cagcacagcc gggcctacag caagcaacca tgtctaaggg 61 acctgcagtt ggtattgatc ttggcaccac ctactcctgt gtgggtgtct tccagcatgg 121 aaaggtggag ataattgcca atgaccaggg taaccgaacc acgccaagct atgttgcttt 181 tactgacaca gaacgattaa ttggggatgc cgcgaagaat caggttgcaa tgaaccccac 241 caacacagtt tttgatgcca aacgtctgat cggacgtagg tttgatgatg ctgttgttca 301 gtctgatatg aagcactggc ccttcatggt ggtgaacgat gcaggcaggc ccaaggtcca 361 agtagaatac aaaggagagg caaaaagttt ctacccagag gaggtgtcct ctatggttct 421 gaccaagatg aaggaaattg cagaagccta tctcgggaag actgttacca atgctgtggt 481 cacagtgcca gcctacttca atgattctca gcgacaggct acaaaagatg ctggaactat 541 tgctggcctg aatgtcctgc gaattatcaa tgaaccaact gctgctgcta ttgcttatgg 601 gctagataag aaggttggag ctgaaaggaa tgtgctcatt tttgacttgg gaggtggtac 661 ttttgatgtg tctatcctca ctattgagga tggaattttt gaagtcaaat caacagccgg 721 agacacccac ttgggtggag aagactttga taacagaatg gtcaaccatt tcattgctga 781 gtttaagcga aacgacaaga aggacatcag cgagaacaag agagctgtca ggcgtctgcg 841 tactgcctgt gaacgggcaa agcgcaccct ctcctccagc acccaggcca gtattgagat 901 tgattctctc tatgagggaa ttgatttcta tacctccatt acccgtgctc gattcgaaga 961 attgaatgct gacctgttcc gaggcactct ggaccctgta gagaaggccc ttcgagatgc 1021 taaactagac aagtcacaga tccatgacat tgtcttggtg ggtggttcca ccagaatccc 1081 caagattcag aagcttctgc aagacttctt caatggaaaa gaactgaata agagcattaa 1141 ccccgatgaa gctgttgctt atggtgcagc tgtccaggcg gccattctat ctggagacaa 1201 gtctgagaat gttcaggatt tgttgctctt ggatgtcact cctctttccc ttggcattga 1261 aactgctggt ggagtcatga ctgtcctcat caagcgcaat accaccatcc ctaccaagca 1321 gacgcagact ttcactacct attctgacaa tcagcctggt gtgctcattc aggtctatga 1381 aggcgaaagg gccatgacca aggataacaa cctgcttgga aagtttgaac ttacaggcat 1441 ccctccagca ccccgtggtg ttcctcagat tgaagttact tttgacattg atgccaatgg 1501 catcctcaat gtctctgctg tagataagag cacaggcaag gagaacaaga tcactatcac 1561 caacgacaag ggccgcttga gcaaggagga tattgaacgc atggtccagg aagctgagaa 1621 gtacaaagct gaagatgaga agcagagaga taaggtttcc tccaagaatt cactggagtc 1681 ctatgctttc aacatgaaag caacagttga agacgagaaa cttcaaggca agatcaatga 1741 tgaggacaaa cagaagattc tagacaagtg taatgaaatc atcagttggc tggataagaa 1801 tcagactgca gagaaggaag aatttgaaca ccagcagaaa gaactggaga aagtctgcaa 1861 ccccatcatt accaagctgt accagagtgc tggtggcatg cctggaggaa tgcccggggg 1921 cttccctggt ggtggagctc ctccatctgg tggtgcttct tcagggccta ccattgaaga 1981 ggtggattaa gtcagtccaa gtagaggtgt agcattgttc cacagggaaa catttgaagg 2041 acccaaattt gcaaagtttc atggcagttt ttaaatttaa actgttaaca ataaattact 2101 gggcattctc aatacttgaa catggaacat gtacacagga aataaaacat tgctctttat 2161 aagcactgta tcctaagtgg aaaactcaat gtctaatatg gtggaaaatg gaatgtctaa 2221 ataaaactat ttaaattggc acc // LOCUS HAMTCP1A 1845 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Chinese hamster T-complex protein 1 (TCP-1) mRNA, complete cds. ACCESSION M34665 KEYWORDS T-complex protein 1. SOURCE Chinese hamster cell line CHO, cDNA to mRNA, clone pRG 501. ORGANISM Cricetulus griseus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetini. REFERENCE 1 (bases 1 to 1845) AUTHORS Ahmad,S. and Gupta,R.S. TITLE Cloning of a Chinese hamster ovary cell protein homologous to the mouse T-complex protein TCP-1: Structural similarity to the ubiquitous "Chaperonin" family of heat shock proteins JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 01-JUN-1990. Author address: R.S.Gupta McMaster University 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN%GUPTAR@,SSCVAX.McMASTER.CA FEATURES from to/span description pept 89 1759 T-complex protein 1 signal 1818 1823 poly-A signal BASE COUNT 530 a 368 c 472 g 475 t ORIGIN 1 gttccccgct gtggtggccg cagtccggcc tctgagcgga gatcccggcc gtccgcggtg 61 ttagcgaggc cagccaggtt ccctaacgat ggagggccct ttgtccgtgt tcggggaccg 121 cagcactgga gaggcgatcc gctcccagaa tgttatggct gcagcttcca ttgccaacat 181 tgtgaaaagt tctctggggc cagttggctt ggataaaatg ttggtggatg acattggtga 241 tgtaaccatt accaacgatg gggccaccat cctgaagtta ctggaggtag aacaccctgc 301 agctaaagtt ctttgtgagc tggctgactt gcaagacaaa gaagtgggag atggaactac 361 ctctgtggta attattgcag cggagcttct gaaaaatgca gatgaactag tcaaacagaa 421 aattcatcca acatcagtta ttagtggcta tcggcttgcc tgcaaggaag cagtgcgcta 481 tatcagtgag aacctaatta ttaacacaga cgaacttgga agagactgtc tgattaatgc 541 cgctaagaca tccatgtctt ccaaaattat tggaataaat ggtgatttct ttgctaatat 601 ggtggtagat gctgtacttg ctgtcaaata cacagatctg agaggccagc ctcgatatcc 661 agtcaattct gttaatattc tgaaagccca tggaagaagt caggtagaaa gcatgctgat 721 caatggctat gcactgaact gtgtggtggg atctcagggc atgcccaaga ggatagttaa 781 tgcaaaaatt gcatgtcttg acttcagcct gcagaaaaca aaaatgaagc ttggtgtgca 841 ggtggttatt acagatcctg agaaattgga ccaaattaga cagagagaat cagacatcac 901 caaggagaga attgaaaaga ttctggcgac tggggccaat gttattctga ccactggtgg 961 gatagatgat atgtgtctga agtactttgt ggaggctggt gccatggctg ttagacgagt 1021 tctaaaaagg gatctcaagc gtatcgctaa agcttctgga gcaagtatcc tgtccacact 1081 ggccaatttg gaaggcgaag aaacttttga agctaccatg ctggggcaag cagaagaagt 1141 ggtccaggag agaatttgtg atgatgagct gatcttaatc aaaaatacca aagctcgtac 1201 atctgcatca atcatcttac gaggagcaaa tgatttcatg tgtgatgaaa tggagcgatc 1261 tttacatgat gctctttgtg tggtgaagag agttttggag tcaaaatctg tagtcccagg 1321 aggaggtgct gtagaagccg ccctgtccat ataccttgaa aactatgcaa ccagtatggg 1381 gtctcgggaa cagcttgcta ttgcagagtt tgcaaggtct cttcttgtta ttcctaatac 1441 actggcagtg aatgctgccc aagactccac tgacctggtt gccaagttac gagcttttca 1501 caatgaggct caagttaacc cagaacgtaa aaacctgaag tggattggtc ttgatttgat 1561 caatggaaaa ccacgagaca acaagcaagc aggggtgttt gaaccaacca tagttaaagt 1621 gaagagcctg aagtttgcaa cagaagctgc aatcactatt cttcgaatcg atgatctgat 1681 aaaattacac ccggaaacta aagacgataa acatggaagt tatgaaaatg ctgttcactc 1741 tggagccctt gatgactgat tggatttccc ttttatttat agcagtgtca ggtgcaatgt 1801 agccttgggt atctcacatt aaagtacagt gagctgtcca cctga // LOCUS HUMHP601A 1941 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human chaperonin (HSP60) non-functional pseudogene 1. ACCESSION M34660 KEYWORDS chaperonin; pseudogene. SOURCE Human fetal liver DNA, clone PS2-1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 111 to 1941) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. TITLE Nucleotide sequence and novel structural features of human and Chinese hamster HSP60 (chaperonin) gene families JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (bases 1 to 1941) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 29-MAY-1990. Author address: R.S.Gupta McMaster University Dept of Biochemistry 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN%GUPTAR.@SSCVAX.McMASTER.CA FEATURES from to/span description BASE COUNT 624 a 329 c 446 g 541 t 1 others ORIGIN 1 atatgaaata aagcctttat gtgctctacc taaattaata aatttattta ttttttttng 61 tatatttgct atgtcacctt tagaaagtaa gaggcagctc tcacttgctg ctgatgacct 121 gcctcgccat gcgacatgtc ctgccagcac cccacagaaa tgcttccatt ccattaccca 181 cagtctttca ccagatgaga ccagtgtcca ggctactggc tcctcacctc acttgaagtg 241 atggtaaaga tgtaaaattt ggtgctgatg tccgagcctt aatgcttaaa agtgtagacc 301 tttttgtcga tgtagccatt acaatggggc caaagggaag aacagtaatt attgaacata 361 gctgggcaag tcccaaagta acaaaagatg gtgtgactga tgcaaagtca attgacttaa 421 aagataaata taaaagcatt ggagctaaac ttgtccaaga tgttgccaat aacacagatg 481 aagagactgg ggatggcact atcacttgct gttgtactgg tatgctctat ttccaaataa 541 ggtttccaga aggttagcaa aggtgctaat ccagtggaaa tcaggagagg tgtatgttag 601 ctgatgctgt aattgctgaa cttaaaaagc agtctaaacc tgtgaccaaa cctgaagaaa 661 ttgcacaggt tgctacaatt tctgcaaatt gagacaaaga aattggcaac atcatctctg 721 atgcaatgaa aaaagttgga agaaagggca tcatcacagt aaaggatgga aaaacactga 781 ctgtagaatt agaaattatt gaaggcatga aatttgatcg aggatatatt tctccatact 841 ttattaatac atcaaaaggt gagaaatgtg aattccagga tgcctatgtt ctgttgcatg 901 aaaagcaaaa tttctacgtg ctccacgtcc attgtaactg ctcttgcaaa ttgccaatgc 961 ttactgtaag cctttggtca taattgctgg agatattgat ggagaagctc taactacact 1021 catcctgaat aggctaaagg ttggtcttca ggttgtggca gtcaaggctc cagggtttgg 1081 tgacaataga aagaaccagc ttaaagatac ggttattgct actggtggta cagtgtttgg 1141 agaagagggc tcacactaaa tcttgaagac gttcagcctc gtgacgtagg agagttggag 1201 aggtactgtg atcaagatat gccatgctct taaaagcaaa aggtaacaag tctcaaatta 1261 aaaatgtgtt caagaaatca ttgaccagtc agatgtcaca actatgtaat tgaaaaggaa 1321 aaagtgagtg gagaaacttt cagatggagt agctgtgctg aaggttggtg gcaagtgatg 1381 ttgaagttaa tgaagagaaa gacagagtta taggtgcact taatgctaca agagctgctg 1441 ttgaagaagg cattgtttag ggagggggtt gtgccctgct tcgatgcatt ccagccttgg 1501 actcattcac tccagctaat gaagataaaa taattggtat agaaattatt aaaagaacac 1561 tcaaaattcc agcaatgaca attcgtaaga atgcaggtgt tgatgcattt ttgatagttg 1621 agaaaattat gtaaagttcc tcagaagttg gttatgatac tatgttagga gatgtcgtga 1681 atatggtgga aaaagacatt attgacccaa caaaggttgt gagaactgct tcattggatg 1741 ctgctggcat gccctctata ttaactacag cagctgttgt agtcacagaa attcctaaag 1801 aagggaacag ccctggaatg ggtgcatgtg gaatgggagg tggcctgttc taattcctag 1861 aatagtgctt tacctttatt aatgaattgt gataggaacc caaggcagtg ttcctcacca 1921 ataacttcag agaagtcagt t // LOCUS HUMHP602A 1920 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human chaperonin (HSP60) non-functional pseudogene 2. ACCESSION M34662 KEYWORDS chaperonin; pseudogene. SOURCE Human fetal liver DNA, clone PS2-1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 117 to 1920) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. TITLE Nucleotide sequence and novel structural features of human and Chinese hamster HSP60 (chaperonin) gene families JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (bases 1 to 1920) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 29-MAY-1990. Author address: R.S.Gupta McMaster University Dept of Biochemistry 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN%GUPTAR.@SSCVAX.McMASTER.CA FEATURES from to/span description BASE COUNT 619 a 324 c 431 g 544 t 2 others ORIGIN 1 tggattatgn aaatnaaagc ctttatgtgc tctgcctaaa ttaatatttt attttttttt 61 gatacttgct atgtcacctt tagaaagtaa gaggcagctc tcacttgctg ctgatgacct 121 gcctcacctc accatgcaca tgtcctgcca ccaccccaca gaaatgcttc acttacccac 181 agtctttcgc cagatgagac cagtgtccag ggtactggct cctcaccctc acttgaagga 241 tggtaaagat gtaaaatttg gtgctgatgt ctgcgcctta atgcttcaaa gtgtagactt 301 ttgtcagtaa ttattgaaca tagctgggaa gtcccaaagt aacaaaagat ggtctgactg 361 atgcaaagtc aattgactta aaggataaat ataaaagcat tggagctaaa cttctccaag 421 atgttgccta aaacacaaca aatggagaga ctggggatgg cactatcact gctgctgtac 481 tggtatgctc tatttccaaa taagccttcc agaaggttag caaaggtgct aatccagtgg 541 aaatcatcag agagtgtgat gttagctgtt gatgctgtaa ttgctgaact taaaaagcag 601 tctaaacctg tgaccaaacc tgaagaaatt gcacaggttg ctacaatttc tgcaaatgga 661 cacaaagaaa attggtaaca tcatctctga tgcaatgaaa aagtttggaa gaaagggcat 721 catcacagta aaggatggaa aaacactgac tgatgaatta gaaattattg aaggcatgaa 781 aaatttgatc gaggatatat ttctccatac tttcttaata catcaaaagg tgagaaatgt 841 gaattccagg atgcctatgt tctactgagt gaaaagaaca tttctggtgt ccagtccatt 901 gtacctgctc ttgaaattgc cagtgcttac cttaagcctt tggtcacaat tgctgaagat 961 attgatgaag aaacgttaag tacgctcatc ttgaataggc taaaagttgg tcttcaggtt 1021 gtagcagcca aagtttcagg ttttggtgac aacggagcca gcttaaagat atggctattg 1081 ctactggtag tgcagtgttt ggagaagagg ggttaaccct aatcttgaag atgctcagcc 1141 tcatgactca ggaaaatttg gagaggtcat tgtgccaaag tagtgctatg tatttaaaag 1201 gaaaagatga caaagcttaa attgaaaaat gtattcaaga aatcattaag tagttagata 1261 tcataactag tggatatgaa aagaaaaaac tgaatgaata tatggcaaaa ctttcagatg 1321 gagtagccgt gttgatggtt ggttggtgag acaagtgatg ttcaggtgaa agacaagaaa 1381 gacagattta ccgatgtcct taatgctaca agagctgcta ttgaagaagg cattgttttg 1441 ggagggggtt gtgccctgct tcgagcattc cactcattca ctccagctaa tgaagataaa 1501 aataatggca tagaaattat taaaagaaca ctcaaaattc cagcaatgac tattgctaag 1561 aatgcaggtg ttgatttttg atagttgaga aaattatgca aagttcctca gaagttggtt 1621 atgatactat gttaggagat gtcgtgaata tggtggaaaa agacattatt gacccaacaa 1681 aggttgtgag aactgcttta ttggatgctg cttgcatggc tctctattaa ctacagcagc 1741 tgttgtagtc acaaaaattc ctaaagaagg gaacagccct ggaatgggtg caatgtgtgg 1801 aatgggaggt ggcctgttct aattcctaga atagtgcttt acctttatta atgaattgtg 1861 atagggagcc caaggcgtgt tcctcaccaa taacttcaga gaagtcagtt ggagaaaatg // LOCUS HUMHP603A 1912 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human chaperonin (HSP60) non-functional pseudogene 3. ACCESSION M34661 KEYWORDS chaperonin; pseudogene. SOURCE Human fetal liver DNA, clone PS5-4. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 99 to 1912) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. TITLE Nucleotide sequence and novel structural features of human and Chinese hamster HSP60 (chaperonin) gene families JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (bases 1 to 1912) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 29-MAY-1990. Author address: R.S.Gupta McMaster University Dept of Biochemistry 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN%GUPTAR.@SSCVAX.McMASTER.CA FEATURES from to/span description BASE COUNT 614 a 319 c 449 g 527 t 3 others ORIGIN 1 ctttatgtgc tcttanctaa attaataatt tatttanntt tttttgtata tttgctatgt 61 cacctttaga aagtaagagg cagctctcac ttgctgctga tgacctgcct cgccatgcac 121 atgtctgcca gcaccccaca gaaatgcttc cattacccac agtctttcac cagatgagac 181 cagtgtccag ggtactggct cctcacctca cttgaagtga tggtaaagat gtaaaatttc 241 ctgctgatgt ccgagcctta atgcttcaaa gtgtagactt ttttgtcgat gctgtagcca 301 ttacaatggg gccaaaggga agaacagtaa ttattgaaca tagctgggga agtcccaaag 361 taacaaaaga tggtgtaact gatgcaaagt caattgactt aaaggataaa tataaaagca 421 ttggagctaa acttgtccaa gatgttgcca ataacacaga tgaagagact gggggatggc 481 actatcactg ctgctgtact ggtatgctct atattcaaat aaggcttcca gaaggttagc 541 aaaggtgcta atccagtgga aatcaagaga ggtgtgatgt tagctgttga tgctgtaatt 601 gctgaactta aaaagcagtg taaacctgtg accaaacctg aaattgcaca ggttgctaca 661 atttctgcaa atggagacaa agaaattggt aacatctctg atgcaatgaa aaagtttgga 721 agaaagggca tcacagtaaa ggatggaaaa acactgactg atgaattaga aattattgaa 781 ggcatgaaaa tttgatcgag gatatatttc tccatacttt attaatacat caaaaggtga 841 gaaatgtgaa ttccaggatg cctatgttct gttgcatgaa aagaaaattt ctagtgtcca 901 gtccattgta actgctcttg aaattgccaa tgcttactgt aagcctttgg tcataattgc 961 tggagacatt gatggagaag ctctaactac actcatcctg aataggctaa aggttggtct 1021 tcaggttgtg gcagtcaaag ctccagggtt tgggtacaat agaaagaacc agcttaaaga 1081 tacggtcatt gctactggtg gtacagtgtt tggagaagag ggctgacact aaatcttgaa 1141 gacgttcagc ctcgtgacgt aggagaagtt ggagaggtca ctgtgaacaa agattatgcc 1201 atgctcttaa aaggaaaagg taacaagtct caaattgaaa aatgtgttca agaaatcatt 1261 gaccagtcag atgtcacaac tagtgaatac gaaaaggaaa aagtgagtgg agaaactttc 1321 agatggagta gctgtgctga aggttgttgg tgggacaagt gatgttgaag tgaatgaaga 1381 gaaagacaga gttacaggtg cacttaatgc tacaagagct gctgttgaag aaggcattgt 1441 ttagggaggg ggttgtgccc tgcttcgatg cattccagcc ttggactcat tcactccagc 1501 taatgaagat aaataattgg tatagaaatt attaaaagaa cactcaaaat tccagcaatg 1561 acaattgcta agaatgcagc tgttgatggc attttgatag ttgagaaaat tatgtaaagt 1621 gcctcagaag ttggttatga tactatgtta ggagatgtcg tgaatatggt gaaaaagaca 1681 ttattgaccc aacaaaggtt gtgagaactg cttcattgga tgctgctggc atggcctctc 1741 tattaactac agcagctgtt gtagtcacag aaattcctaa agaagagaac agccctggaa 1801 taggtgcaat gtgtggaatg ggaggtggcc tgttcaaatt cctagaatag tgctttacct 1861 ttattaatga attgtgatag gaacccaagg cagtgttcct caccaataac tt // LOCUS HUMHP604A 2019 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human chaperonin (HSP60) non-functional pseudogene 4. ACCESSION M34663 KEYWORDS chaperonin; pseudogene. SOURCE Human fetal liver DNA, clone PS5-4. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 123 to 2019) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. TITLE Nucleotide sequence and novel structural features of human and Chinese hamster HSP60 (chaperonin) gene families JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (bases 1 to 2019) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 29-MAY-1990. Author address: R.S.Gupta McMaster University Dept of Biochemistry 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN%GUPTAR.@SSCVAX.McMASTER.CA FEATURES from to/span description BASE COUNT 657 a 327 c 479 g 556 t ORIGIN 1 agagaaatgt aatatgaaat aaagctttat gtgctctacc taaattaata atttatttat 61 ttttttttgt atatttgcta tgtcaccttt agaaagtaag aggcagctct cacttgctga 121 ttgatgacct gatgatgacc tgcctcgcca tgcacatgtc ctgccagcac cccacagaaa 181 tgcttccatt acccacagtc tttcaccaga tgagaccagt gtccaggcta ctggctactg 241 gctcctcacc tcacttgaag tgatggtaaa gatgtaaaat ttggtgctga tgtccgagcc 301 ttaatgcttc aaagtgtata gcttttgtcg agctgttagc cattacaaat gggccaaagg 361 gaagaacagt agattattga acatagctgg ggaagtccca aagtaacaaa agagtggtgt 421 gactgatgca aaggcaattg acttaaagga taaatataaa agcattggag ttaaacttgt 481 ccaagatgtt gccaataaca cagatgaaga agactgggga tggcactatc actgctgctg 541 tactggtatg ctctatttcc aaataaggct tccagaaggt tagcaaaggt gctaatccgt 601 ggaaatcagg agaggtgtga tgttagctgt tgatgctgta attgctgaac ttaaaaagca 661 gtctaacctg tgaccaaacc tgaagaaatt gcacaggttg ctacaatttc tgcaaatgga 721 gacaaagaaa ttggtaacat catctctgat gcaatgaaaa actttggaag aaagggcatc 781 atcacagtaa aggatggaaa aacactgact gatgaattag aaattattga aggcatgaaa 841 atttgatcga ggatatattt ctccatactt tattaataca tcaaaaggtg agaaatgtga 901 attccaggat gcctatgttc tgttgcatga aaagaaaatt tctagtgtcc agtccattgt 961 aactgctctt gaaattgcca atgcttagtg taagcctttg gtcatatatt gctggagaca 1021 ttgatggaga agctctaact acactcatcc tgaataagct aaaggttggt cttcaggttg 1081 tggcagtcaa agctaaagct ccagggtttg gtgacaatag aaagaaccag cttaaagata 1141 cggttattgc tactggtggt acagtgtttg gagaagaggg ctgacactaa atcttgaaga 1201 cgttcagcct cgtgacgtag gagaagttgg agaggtcact gtgatcaaga ttatgccatg 1261 ctcttaaaag gaaaaggtaa caagtctcaa attgaaaaat gtgtgcaaga aatcgttgac 1321 cagtcagatg tcacaactat gtaatacgaa aaggaaaaag tgagtgaaga aactttcaga 1381 tggagtagct gtgctgaagg ttggtgggac aagtgatgtt gaagtgaatg aagagaaaga 1441 cagagttata ggtgcactta atgctacaag agctgctgtt gaagaaggca ttgtttaggg 1501 agggggttgt gccctgcttc gatgcattcc agccttggac tcattcactc cagctaatga 1561 agataaaata attggtatag aaattattaa aagaacactc aaaattccag caatgacaat 1621 tgctaagaat gcaggtgttg atgcattttt gatagttgag aaaattatgt aaagttcctc 1681 agaagttggt tatgatacta tgttaggaga tgtcgtgaat atggtggaaa aagacattat 1741 tgacccaaca aaggttgtga gaactgcttc attggatgct gctgcatggc ctctctatta 1801 ttaactacag cagctgttgt agtcacagaa attcctaaag aagggaacag ccctggaatg 1861 ggtggaatgg gtgcaatgat atgtggaatg ggaggtggcc tgttctaatt cctagaatag 1921 tgctttacct ttattaatga attgtgatag gaaacccaag gcagtgttcc tcaccaataa 1981 cttcagagaa gtcagttgga gaaaatgaag aaaaaggct // LOCUS HUMHSP60A 2202 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human chaperonin (HSP60) mRNA, complete cds. ACCESSION M34664 KEYWORDS chaperonin. SOURCE Human placenta cDNA to mRNA, and DNA, clone PGEM-10. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 2202) AUTHORS Venner,T.J., Singh,B. and Gupta,R.S. TITLE Nucleotide sequence and novel structural features of human and Chinese hamster HSP60 (chaperonin) gene families JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Gupta, 29-MAY-1990. Author address: R.S.Gupta McMaster University Dept of Biochemistry 1200 Main Street West Hamilton Ontario, CANADA L8N 3Z5 email: IN%GUPTAR.@SSCVAX.McMASTER.CA FEATURES from to/span description pept 25 1746 chaperonin (HSP60) BASE COUNT 699 a 371 c 538 g 594 t ORIGIN 1 cacgcttgcc gccgccccgc agaaatgctt cggttaccca cagtctttcg ccagatgaga 61 ccggtgtcca gggtactggc tcctcatctc actcgggctt atgccaaaga tgtaaaattt 121 ggtgcagatg cccgagcctt aatgcttcaa ggtgtagacc ttttagccga tgctgtggcc 181 gttacaatgg ggccaaaggg aagaacagtg attattgagc agggttgggg aagtcccaaa 241 gtaacaaaag atggtgtgac tgttgcaaag tcaattgact taaaagataa atacaagaac 301 attggagcta aacttgttca agatgttgcc aataacacaa atgaagaagc tggggatggc 361 actaccactg ctactgtact ggcacgctct atagccaagg aaggcttcga gaagattagc 421 aaaggtgcta atccagtgga aatcaggaga ggtgtgatgt tagctgttga tgctgtaatt 481 gctgaactta aaaagcagtc taaacctgtg accacccctg aagaaattgc acaggttgct 541 acgatttctg caaacggaga caaagaaatt ggcaatatca tctctgatgc aatgaaaaaa 601 gttggaagaa agggtgtcat cacagtaaag gatggaaaaa cactgaatga tgaattagaa 661 attattgaag gcatgaagtt tgatcgaggc tatatttctc catactttat taatacatca 721 aaaggtcaga aatgtgaatt ccaggatgcc tatgttctgt tgagtgaaaa gaaaatttct 781 agtatccagt ccattgtacc tgctcttgaa attgccaatg ctcaccgtaa gcctttggtc 841 ataatcgctg aagatgttga tggagaagct ctaagtacac tcgtcttgaa taggctaaag 901 gttggtcttc aggttgtggc agtcaaggct ccagggtttg gtgacaatag aaagaaccag 961 cttaaagata tggctattgc tactggtggt gcagtgtttg gagaagaggg attgaccctg 1021 aatcttgaag acgttcagcc tcatgactta ggaaaagttg gagaggtcat tgtgaccaaa 1081 gacgatgcca tgctcttaaa aggaaaaggt gacaaggctc aaattgaaaa acgtattcaa 1141 gaaatcattg agcagttaga tgtcacaact agtgaatatg aaaaggaaaa actgaatgaa 1201 cggcttgcaa aactttcaga tggagtggct gtgctgaagg ttggtgggac aagtgatgtt 1261 gaagtgaatg aaaagaaaga cagagttaca gatgccctta atgctacaag agctgctgtt 1321 gaagaaggca ttgttttggg agggggttgt gccctccttc gatgcattcc agccttggac 1381 tcattgactc cagctaatga agatcaaaaa attggtatag aaattattaa aagaacactc 1441 aaaattccag caatgaccat tgctaagaat gcaggtgttg aaggatcttt gatagttgag 1501 aaaattatgc aaagttcctc agaagttggt tatgatgcta tggctggaga ttttgtgaat 1561 atggtggaaa aaggaatcat tgacccaaca aaggttgtga gaactgcttt attggatgct 1621 gctggtgtgg cctctctgtt aactacagca gaagttgtag tcacagaaat tcctaaagaa 1681 gagaaggacc ctggaatggg tgcaatgggt ggaatgggag gtggtatggg aggtggcatg 1741 ttctaactcc tagactagtg ctttaccttt attaatgaac tgtgacagga agcccaaggc 1801 agtgttcctc accaataact tcagagaagt cagttggaga aaatgaagaa aaaggctggc 1861 tgaaaatcac tataaccatc agttactggt ttcagttgac aaaatatata atggtttact 1921 gctgtcattg tccatgccta cagataattt attttgtatt tttgaataaa aaacatttgt 1981 acattcctga tactgggtac aagagccatg taccagtgta ctgctttcaa cttaaatcac 2041 tgaggcattt ttactactat tctgttaaaa tcaggatttt agtgcttgcc accaccagat 2101 gagaagttaa gcagcctttc tgtggagagt gagaataatt gtgtacaaag tagagaagta 2161 tccaattatg tgacaacctt tgtgtaataa aaatttgttt aa // LOCUS MUSGCANF 4049 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse guanylate cyclase/atrial natriuretic factor mRNA, complete cds. ACCESSION J05504 KEYWORDS atrial natriuretic factor; guanylate cyclase. SOURCE Mouse (strain C57B1/6J) Leydig cell line MA-10, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 4049) AUTHORS Pandey,K.N. and Singh,S. TITLE Molecular cloning and expression of murine guanylate cyclase/atrial natriuretic factor receptor cDNA JOURNAL J. Biol. Chem. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by K.N.Pandey, 31-MAY-1990. FEATURES from to/span description pept 348 3521 guanylate cyclase/atrial natriuretic factor signal 4029 4034 poly-A signal BASE COUNT 879 a 1164 c 1140 g 866 t ORIGIN 1 cagaaaccct cccaaactcc tatagccaca cacacctttc ccggccaaga tccaaacaaa 61 cctctacttt cctcttccct aggagccaga ctcccttcgg gtgctgcgct cgctctcacc 121 tgctctaaag cacctccgct ctcggacgct cccaattccg ccctcctgct cgacggcggg 181 acagtcgcag cctcggcagg cagcttgctc tcgccgctgc ggcttcaacc cagccccctc 241 cctcgctacg gctgggcgct cttgactccc gaccctcgcc tctgagcccg aggacggcga 301 tcagaccatg gtgacagcgc tgctccgtcg ctgcgctcgc tgaggccatg ccgcgttccc 361 gacgcgtccg tccgcgccta agggcgctgc tgctgctacc gccgctgctg ctgctccgaa 421 gcggccacgc gagcgacctg accgtggctg tggtgctgcc cgtgaccaac acctcgtacc 481 cgtggtcctg ggcgcgtgta gggccggcgg tggaactggc tctcgggagg gtgaaggctc 541 ggccggactt gctgccgggt tggacggtcc gtatggtgct gggcagcagc gagaacgcgg 601 cgggcgtctg ctccgacacc gctgcaccgc tggccgcggt ggatctcaag tgggagcaca 661 gccccgccgt gttcctgggc cccggctgcg tatactctgc tgccccggtg gaccgcttca 721 ccgcgcactg gcggttgccg ctgctgacgg ctggcgcccc ggctctgggc atcggggtga 781 aggatgagta cgcgttaacc acccgcacag gacccagcca tgtcaagctg ggcgacttcg 841 tgacggcgct gcatcgacgg ctgggctggg agcaccaggc gcttgtgctc tatgcagatc 901 ggctgggcga cgaccggccg tgcttcttca tagtggaggg gctgtacatg cgggtgcgtg 961 agcgactcaa catcacagta aatcaccagg agttcgtcga gggcgacccg gaccactaca 1021 ccaagctact gcggaccgtg cagcgcaagg gcagagttat ctacatctgc agttctccgg 1081 atgccttcag gaatctgatg cttttggccc tggatgctgg cctgactggg gaggactatg 1141 ttttcttcca cctggatgtg tttgggcaaa gccttcaggg tgctcagggc cctgttccag 1201 agaagccctg ggaaagagac gatgggcagg ataggagagc ccgccagcgc tttcaggctg 1261 caaaaattat tacttacaaa gaacccgata atcctgagta cttggaattc ctgaagcagc 1321 taaaactctt ggctgacaag aaattcaact tcaccatgga ggatggcctg aaaaatatca 1381 tcccagcatc cttccatgac gggctcctgc tctatgtcca ggcagtgaca gagactctgg 1441 cacagggggg cactgtcact gatggagaga acatcactca gcggatgtgg aaccgaagct 1501 tccaaggtgt gacaggatac ctgaaaattg atagaaatgg agatcgggac actgattctc 1561 ctctctggga tatggacccc gagacaggtg ccttcagggt tgtcctgaac tttaatggta 1621 cttcccagga gctgatggct gtgtcagaac acagattata ctggcctctg ggatacccac 1681 ctcctgacat ccctaaatgt ggctttgaca atgaggaccc agcctgcaac caagaccact 1741 tttccacact ggaggttctg gctttggtgg gcagcctctc tctggttagc tttctgatcg 1801 tgtctttctt catatacagg aagatgcagc tggaaaagga gctggtctca gagttgtggc 1861 gggtgcgctg ggaggacttg cagcccagca gcctggagag gcaccttcgg agcgctggca 1921 gtcggctgac cctgagtggg cgaggctcca attatggctc cctgctaacc acggagggcc 1981 agttccaagt ctttgccaag acagcatact ataagggcaa cctcgtggct gtgaaacgtg 2041 tgaaccggaa acgcattgag ttgacacgaa aagtcctgtt tgaacttaaa catatgcggg 2101 atgtgcagaa tgagcaattg accagatttg tgggagcttg taccgaccct cccaacatct 2161 gtatcctcac agagtactgt ccccgtggaa gcctacagga cattctagag aatgagagta 2221 ttaccctgga ctggatgttt cggtactcac tcaccaatga cattgtcaag ggaatgctct 2281 ttctacacaa cggggccatt tgttcccatg ggaacctcaa gtcatccaac tgcgtggtag 2341 atggacgttt tgtgttaaag atcacagact atgggctcga gagcttcaga gacccggagc 2401 cagagcaagg acacaccctc tttgccaaaa aactgtggac tgcacctgag ctcctgcgaa 2461 tggcttcccc acctgcccgt ggctcccaag ctggggatgt ctacagtttt ggtatcatcc 2521 ttcaggaaat tgccctaaga agtggggtct tctatgtgga aggtttggac ctcagcccaa 2581 aagagatcat tgagcgtgtg actcggggtg agcagccccc attccgacct tccatggatc 2641 tgcagagcca cctggaggaa ctggggcagc tgatgcagag gtgctgggca gaggatcctc 2701 aggagcggcc accctttcaa cagatccgcc tggcgctgcg caagttcaac aaggagaaca 2761 gcagcaacat cctggacaac ctgctgtcac gcatggaaca gtacgccaac aacctggagg 2821 aactggtaga ggagagaaca cagccttatc tggaggagaa gcgcaaagct gaggccctgc 2881 tttaccagat tctgcctcac tctgtggctg agcagctgaa gagaggcgag acagtccagg 2941 ctgaggcatt tgatagtgtt actatctatt tcagtgatat cgtgggcttt acagctcttt 3001 cagcagagag cacacccatg caggtggtca ccctgctcaa tgatctgtac acctgttttg 3061 atgctgtcat agacaacttt gatgtgtaca aggtagagac cattggtgat gcttacatgg 3121 tggtatcagg gctcccagtg aggaatggac agctccatgc ccgagaggta gcccgaatgg 3181 cacttgcact gctcgatgct gtacgctcct tccgcatcgg ccataggccc caggaacagc 3241 tgcgcttgcg cattggaatt cacacaggtc ctgtgtgtgc tggtgtggta gggctaaaga 3301 tgccccgata ctgcctcttt ggagacacag tcaacacagc ttcaagaatg gagtctaatg 3361 gggaagccct caggatccac ttgtcttcgg agaccaaggc tgtgctggaa gagttcgatg 3421 gtttcgagct ggagctccga ggggatgtgg aaatgaaggg caaaggcaag gttcgttcct 3481 attggctcct cggggaccgg ggatgcagct ctcgagcctg acctactgcc ctgctattcc 3541 ttgtcacctc ccctccctat cccagcaatg acacgggtct ccaacttccc cctctcccac 3601 agcagctcag ccactgtgga aagattaggg acctaaccag cgcagtcatc agatgtgacc 3661 tctgagagag gatggagatg gtggggactg gagggggact cctaagttta tagggctgac 3721 tgaaataccc agtcactccc gtagcacatg ccccgccccc cccccgcccc cccactcagc 3781 tgcctagcag acagtgattc cttctgccgc cctcaactta gctccactgt gagttagagg 3841 gagggaaatt gccacctgaa ggaaagagaa aagagattct cggggtttgc aggaggcagg 3901 cagtcctgtg tcacaaatac tcccctcact cccagtccac cacctgcccc accgacttcc 3961 cttcccacac agtgcactga ggagaagaga ggcatggggt tgccttgctt ctcctatgag 4021 caaaacccat taaagtcttt attcctgtg // LOCUS MUSMHH2DR 1415 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse MHC class I H-2Dr protein mRNA, complete cds. ACCESSION M34961 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex. SOURCE Mouse (strain B10.RIII) spleen, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1415) AUTHORS Zeling,C. and Pease,L.R. TITLE Diversity among the H-2D/L loci: The structure of H-2Dr and H-2Ds JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by C.Zeling, 29-MAY-1990. Author address: C.Zeling Mayo Clinic 323 Guggenheim 200 1st St. SW Rochester, MN 55905 email: Pease@mayo.edu FEATURES from to/span description pept 1 1089 MHC H-2Dr protein precursor sigp 1 72 MHC H-2Dr protein signal peptide matp 73 1086 MHC H-2Dr protein BASE COUNT 298 a 398 c 442 g 277 t ORIGIN 1 atgggggcga tggctccgcg cacgctgctc ctgctgctgg cggccgccct ggccccgact 61 cagacccgcg cgggccgaca ctcgctgagg tatttcgtca ccgccgtgtc ccgacccggc 121 ctcggggagc cccggtacat agaagtcggc tacgtggacg acacggagtt cgtgcgcttc 181 gacagcgacg cggagaatcc gagagttgag ccgcgggtgc ggtggatgga gcaggtggag 241 cccgagtatt gggagcggaa cacacagatc gccaagggca atgagcagat tttccgagtg 301 aacctgagga ccctgctcag ctactacaac cagagcaagg gcggctctca cacgatccag 361 tggatgttcg gctgtgacgt ggagtcggac gggcgcctcc tccgcgggta ccagcagtac 421 gcatacgacg gctgcgatta catcgccctg aacgaagacc tgaaaacgtg gacggcggcg 481 gacacggcgg cgcagatcac ccgacgcaag tgggagcagg ctggtgctgc agagagaaag 541 agggcctacc tagagggcac gtgcgtggag tggctcctca gacacctgaa gaacgggaac 601 gagacgctgc tgcgcacaga ttccccaaag gcacatgtga cccatcaccc cagatctaaa 661 ggtgaagtca ccctgaggtg ctgggccctg ggcttctacc ctgctgacat caccctgacc 721 tggcagttga atggggagga gctgacccag gacatggagc ttgtggagac caggcctgca 781 ggggatggaa ccttccagaa gtgggcagct gtggtggtgc ctctcgggaa ggagcagaat 841 tacacatgcc atgtgcacca tgaggggctt cctgagcccc tcaccctgag atgggagcct 901 cctccgtcca ctgactctta catggtgatc gttgctgttc tgggtgtcct tggagctatg 961 gccattattg gagctgtggt ggcttttgtg atgatgatga ggagaaacac aggtggaaaa 1021 ggaggggact atgctctggc tccaggctcc cagagctctg aaatgtctct ccaagattgt 1081 aaagcgtgaa gacagctgcc tggactgcac tgagtgacag ccagtgtgtt caggtctctc 1141 ctgtgacatc cagagccctc agttctcttt acacaacgtt gtctgatgtt ccctgtgagc 1201 ttgggttcag tgtgaagaac tgtggagccc agcctgccct gcacaccagg accctatccc 1261 tgcactgccg tgtgttccct tccatagcca accttgctgc tccagccaaa cactggggga 1321 catctgcatc ctgtaagctc catgctaccc tgagctgcag ctcctcactt ccacactgag 1381 aataagaatt tgaatgtggg tggctggaga gatgg // LOCUS MUSMHH2DS 1415 bp ss-mRNA ROD 21-JUL-1990 DEFINITION M.musculus MHC class I H-2Ds protein mRNA, complete cds. ACCESSION M34962 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex. SOURCE M.musculus (strain B10.RIII) spleen, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1415) AUTHORS Zeling,C. and Pease,L.R. TITLE Diversity among the H-2D/L loci: The structure of H-2Dr and H-2Ds JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by C.Zeling, 29-MAY-1990. Author address: C.Zeling Mayo Clinic 323 Guggenheim 200 1st St. SW Rochester, MN 55905 email: Pease@mayo.edu FEATURES from to/span description pept 1 1089 MHC H-2Dr protein precursor sigp 1 72 MHC H-2Dr protein signal peptide matp 73 1086 MHC H-2Dr protein BASE COUNT 292 a 401 c 444 g 278 t ORIGIN 1 atgggggcga tggctccgcg cacgctgctc ctgctgctgg cggccgccct ggccccgact 61 cagacccgcg ctggccgaca ctcgctgagg tatttcgtca ccgccgtgtc ccgacccggc 121 ctcggggagc cccggtacat agaagtcggc tacgtggaca acacggagtt cgtgcgcttc 181 gacagcgacg cggagaatcc gagagttgag ccgcgggtgc ggtggatgga gcaggtggag 241 cccgagtatt gggagcggaa cacacagatc gccaagggca atgagcagag tttccgagtg 301 aacctgagga ccgcgctccg ctactacaac cagagcaagg gcggctctca cacggtccag 361 gtgatgtctg gctgtgacgt ggggtcggac gggcgcctcc tccgcgggta ccagcagcac 421 gcatacgacg gccgcgatta catcgccctg aacgaagacc tgaaaacgtg gacggcggcg 481 gacacggcgg cgcagatcac ccgacgcaag tgggagcagg gtggtgatgc agagcattac 541 aaggcctacc tagagggcac gtgcgtggag tggctcctca gatacctgga gctcgggaac 601 gagacgctgc tgcgcacaga ttccccaaag gcacatgtga cccatcaccc cagatctaga 661 ggtgaagtca ccctgaggtg ctgggccctg ggcttctacc ctgctgacat caccctgacc 721 tggcagttga atggggagga gctgacccag gacatggagc ttgtggagac caggcctgca 781 ggggatggaa ccttccagaa gtgggcagct gtggtggtgc ctcttgggaa ggagcagaat 841 tacacatgcc atgtgcacca tgaggggctt cctgagcccc tcaccctgag atgggagcct 901 cctccgtcca ctgactctta catggtgatc gttgctgttc tgggtgtcct tggagctatg 961 gccattactg gagctgtggt ggcttttgtg atgatgatga ggagaaacac aggtggaaaa 1021 ggaggggact atgctctggc tccaggctcc cagagctctg aaatgtctct ccaagattgt 1081 aaagcgtgaa gacagctgcc tggactgcac tgagtgacag ccagtgtgtt caggtctctc 1141 ctgtgacatc cagagccctc agttctcttt acacaacgtt gtctgatgtt ccctgtgagc 1201 ttgggttcag tgtgaagaac tgtggagccc agcctgccct gcacaccagg accctatccc 1261 tgcactgccg tgtgttccct tccatagcca accttgctgc tccagccaaa cactggggga 1321 catctgcatc ctgtaagctc catgctaccc tgagctgcag ctcctcactt ccacactgag 1381 aataagaatt tgaatgtggg tggctggaga gatgg // LOCUS HUMCETP 1787 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human cholesteryl ester transfer protein mRNA, complete cds. ACCESSION M30185 KEYWORDS cholesteryl ester transfer protein; transfer protein. SOURCE Human adult liver, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1787) AUTHORS Drayna,D., Jarnagin,A.S., McLean,J., Henzel,W., Kohr,W., Fielding,C. and Lawn,R. TITLE Cloning and sequencing of human cholesteryl ester transfer protein cDNA JOURNAL Nature 327, 632-634 (1987) STANDARD simple staff_review FEATURES from to/span description pept 131 1612 cholesteryl ester transfer protein precursor /nomgen="CETP" /map="16q21" /hgml_locus_uid="LF0130L" sigp 131 181 cholesteryl ester transfer protein signal peptide matp 182 1609 cholesteryl ester transfer protein mRNA < 1 1787 CETP mRNA BASE COUNT 397 a 531 c 456 g 403 t ORIGIN 1 gtgaatctct ggggccagga agaccctgct gcccggaaga gcctcatgtt ccgtgggggc 61 tgggcggaca tacatatacg ggctccaggc tgaacggctc gggccactta cacaccactg 121 cctgataacc atgctggctg ccacagtcct gaccctggcc ctgctgggca atgcccatgc 181 ctgctccaaa ggcacctcgc acgaggcagg catcgtgtgc cgcatcacca agcctgccct 241 cctggtgttg aaccacgaga ctgccaaggt gatccagacc gccttccagc gagccagcta 301 cccagatatc acgggcgaga aggccatgat gctccttggc caagtcaagt atgggttgca 361 caacatccag atcagccact tgtccatcgc cagcagccag gtggagctgg tggaagccaa 421 gtccattgat gtctccattc agaacgtgtc tgtggtcttc aaggggaccc tgaagtatgg 481 ctacaccact gcctggtggc tgggtattga tcagtccatt gacttcgaga tcgactctgc 541 cattgacctc cagatcaaca cacagctgac ctgtgactct ggtagagtgc ggaccgatgc 601 ccctgactgc tacctgtctt tccataagct gctcctgcat ctccaagggg agcgagagcc 661 tgggtggatc aagcagctgt tcacaaattt catctccttc accctgaagc tggtcctgaa 721 gggacagatc tgcaaagaga tcaacgtcat ctctaacatc atggccgatt ttgtccagac 781 aagggctgcc agcatccttt cagatggaga cattggggtg gacatttccc tgacaggtga 841 tcccgtcatc acagcctcct acctggagtc ccatcacaag ggtcatttca tctacaagaa 901 tgtctcagag gacctccccc tccccacctt ctcgcccaca ctgctggggg actcccgcat 961 gctgtacttc tggttctctg agcgagtctt ccactcgctg gccaaggtag ctttccagga 1021 tggccgcctc atgctcagcc tgatgggaga cgagttcaag gcagtgctgg agacctgggg 1081 cttcaacacc aaccaggaaa tcttccaaga ggttgtcggc ggcttcccca gccaggccca 1141 agtcaccgtc cactgcctca agatgcccaa gatctcctgc caaaacaagg gagtcgtggt 1201 caattcttca gtgatggtga aattcctctt tccacgccca gaccagcaac attctgtagc 1261 ttacacattt gaagaggata tcgtgactac cgtccaggcc tcctattcta agaaaaagct 1321 cttcttaagc ctcttggatt tccagattac accaaagact gtttccaact tgactgagag 1381 cagctccgag tccatccaga gcttcctgca gtcaatgatc accgctgtgg gcatccctga 1441 ggtcatgtct cggctcgagg tagtgtttac agccctcatg aacagcaaag gcgtgagcct 1501 cttcgacatc atcaaccctg agattatcac tcgagatggc ttcctgctgc tgcagatgga 1561 ctttggcttc cctgagcacc tgctggtgga tttcctccag agcttgagct agaagtctcc 1621 aaggaggtcg ggatggggct tgtagcagaa ggcaagcacc aggctcacag ctggaaccct 1681 ggtgtctcct ccagcgtggt ggaagttggg ttaggagtac ggagatggag attggctccc 1741 aactcctccc tatcctaaag gcccactggc attaaagtgc tgtatcc // LOCUS HUMGHRA04 289 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human growth hormone receptor gene, exon 5. ACCESSION M28461 M26401 KEYWORDS growth hormone binding-protein; growth hormone receptor; transmembrane protein. SEGMENT 4 of 10 SOURCE Human DNA, clones GG.33, GG.48, GG.20, GG.9, GG.47, GG.19. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 289) AUTHORS Godowski,P.J., Leung,D.W., Meacham,L.R., Galgani,J.P., Hellmiss,R., Keret,R., Rotwein,P.S., Parks,J.S., Laron,Z. and Wood,W.I. TITLE Characterization of the human growth hormone receptor gene and the demonstration of a partial gene deletion in two patients with Laron-type dwarfism JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 8083-8087 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable copy of sequence [1] kindly submitted by W.I.Wood, 02-AUG-1989. FEATURES from to/span description pept + 59 + 231 growth hormone receptor, exon 5 /nomgen="GHR" /map="5p13-p12" /hgml_locus_uid="LA0219G" pre-msg < 1 > 289 growth hormone receptor mRNA and introns IVS < 1 > 58 GHR Intron D IVS 232 > 289 GHR Intron E BASE COUNT 90 a 45 c 55 g 99 t ORIGIN About 6 kb after segment 3. 1 acttaagcta caacatgatt tttggaacaa ttaatctttt tttaaccctt cattttagga 61 acactcaaga atggactcaa gaatggaaag aatgccctga ttatgtttct gctggggaaa 121 acagctgtta ctttaattca tcgtttacct ccatctggat accttattgt atcaagctaa 181 ctagcaatgg tggtacagtg gatgaaaagt gtttctctgt tgatgaaata ggtaaatcac 241 aggtttttgt ttcatttgac atagttttag actaaataaa tggggaagc // LOCUS HUMGHRA06 362 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human growth hormone receptor gene, exon 7. ACCESSION M28463 M26401 KEYWORDS growth hormone binding-protein; growth hormone receptor; transmembrane protein. SEGMENT 6 of 10 SOURCE Human DNA, clones GG.33, GG.48, GG.20, GG.9, GG.47, GG.19. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 362) AUTHORS Godowski,P.J., Leung,D.W., Meacham,L.R., Galgani,J.P., Hellmiss,R., Keret,R., Rotwein,P.S., Parks,J.S., Laron,Z. and Wood,W.I. TITLE Characterization of the human growth hormone receptor gene and the demonstration of a partial gene deletion in two patients with Laron-type dwarfism JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 8083-8087 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable copy of sequence [1] kindly submitted by W.I.Wood, 02-AUG-1989. FEATURES from to/span description pept + 75 + 240 growth hormone receptor, exon 7 /nomgen="GHR" /map="5p13-p12" /hgml_locus_uid="LA0219G" pre-msg < 1 > 362 growth hormone receptor mRNA and introns IVS < 1 74 GHR Intron F IVS 241 > 362 GHR Intron G BASE COUNT 117 a 58 c 76 g 111 t ORIGIN Undetermined number of bp after segment 5. 1 atacctgtag tgttcattgg cattgagttg ttgactcttt ggccaatatg gcgtttatat 61 ttttgtcttg aaagatggac cctatattga caacatcagt tccagtgtac tcattgaaag 121 tggataagga atatgaagtg cgtgtgagat ccaaacaacg aaactctgga aattatggcg 181 agttcagtga ggtgctctat gtaacacttc ctcagatgag ccaatttaca tgtgaagaag 241 gtaaaagaaa taaaagatta aaatagtagc taacctggct tttgtcaata taacagttga 301 ttcacccctg cactggtagt gtgttgtcca aatcaaaata tattaacatc agatatcagg 361 at // LOCUS HUMGHRA07 212 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human growth hormone receptor gene, exon 8. ACCESSION M28464 M26401 KEYWORDS growth hormone binding-protein; growth hormone receptor; transmembrane protein. SEGMENT 7 of 10 SOURCE Human DNA, clones GG.33, GG.48, GG.20, GG.9, GG.47, GG.19. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 212) AUTHORS Godowski,P.J., Leung,D.W., Meacham,L.R., Galgani,J.P., Hellmiss,R., Keret,R., Rotwein,P.S., Parks,J.S., Laron,Z. and Wood,W.I. TITLE Characterization of the human growth hormone receptor gene and the demonstration of a partial gene deletion in two patients with Laron-type dwarfism JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 8083-8087 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable copy of sequence [1] kindly submitted by W.I.Wood, 02-AUG-1989. FEATURES from to/span description pept + 59 + 149 growth hormone receptor, exon 8 /nomgen="GHR" /map="5p13-p12" /hgml_locus_uid="LA0219G" pre-msg < 1 > 212 growth hormone receptor mRNA and introns IVS < 1 58 GHR Intron G IVS 150 > 212 GHR Intron H BASE COUNT 53 a 33 c 43 g 83 t ORIGIN Undetermined number of bp after segment 6. 1 gaaactgtgc ttcaactagt cgtaattctg aaagcgaaat attcttgtgt gtttgcagat 61 ttctactttc catggctctt aattattatc tttggaatat ttgggctaac agtgatgcta 121 tttgtattct tattttctaa acagcaaagg taggatgtag gaaggtagta ttctttggta 181 ccttctgtac cagttgtgtt agaccttgcc at // LOCUS HUMGHRA08 198 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human growth hormone receptor gene, exon 9. ACCESSION M28465 M26401 KEYWORDS growth hormone binding-protein; growth hormone receptor; transmembrane protein. SEGMENT 8 of 10 SOURCE Human DNA, clones GG.33, GG.48, GG.20, GG.9, GG.47, GG.19. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 198) AUTHORS Godowski,P.J., Leung,D.W., Meacham,L.R., Galgani,J.P., Hellmiss,R., Keret,R., Rotwein,P.S., Parks,J.S., Laron,Z. and Wood,W.I. TITLE Characterization of the human growth hormone receptor gene and the demonstration of a partial gene deletion in two patients with Laron-type dwarfism JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 8083-8087 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable copy of sequence [1] kindly submitted by W.I.Wood, 02-AUG-1989. FEATURES from to/span description pept + 63 + 132 growth hormone receptor, exon 9 /nomgen="GHR" /map="5p13-p12" /hgml_locus_uid="LA0219G" pre-msg < 1 > 198 growth hormone receptor mRNA and introns IVS < 1 62 GHR Intron H IVS 133 > 198 GHR Intron I BASE COUNT 68 a 35 c 30 g 65 t ORIGIN About 4 kb after segment 7. 1 gctataattg agaatatgta gcttttaaga tgtcaaaacc aaaattttta tatgttttca 61 aggattaaaa tgctgattct gcccccagtt ccagttccaa agattaaagg aatcgatcca 121 gatctcctca aggtaactaa taattttatc taaagttgta gctagtacta attaacacct 181 gaagactcct gtcatatg // LOCUS HUMGHRA09 1881 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human growth hormone receptor gene, exon 10. ACCESSION M28466 M26401 KEYWORDS growth hormone binding-protein; growth hormone receptor; transmembrane protein. SEGMENT 9 of 10 SOURCE Human DNA, clones GG.33, GG.48, GG.20, GG.9, GG.47, GG.19. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1881) AUTHORS Godowski,P.J., Leung,D.W., Meacham,L.R., Galgani,J.P., Hellmiss,R., Keret,R., Rotwein,P.S., Parks,J.S., Laron,Z. and Wood,W.I. TITLE Characterization of the human growth hormone receptor gene and the demonstration of a partial gene deletion in two patients with Laron-type dwarfism JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 8083-8087 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable copy of sequence [1] kindly submitted by W.I.Wood, 02-AUG-1989. FEATURES from to/span description pept + 64 1035 growth hormone receptor, exon 10 /nomgen="GHR" /map="5p13-p12" /hgml_locus_uid="LA0219G" pre-msg < 1 > 1881 growth hormone receptor mRNA and introns IVS < 1 63 GHR Intron I BASE COUNT 607 a 366 c 362 g 546 t ORIGIN About 0.5 kb after segment 8. 1 gctaattcat ttaattatta tgagtttctt ttcatagatc ttcattttct ttctattttc 61 taggaaggaa aattagagga ggtgaacaca atcttagcca ttcatgatag ctataaaccc 121 gaattccaca gtgatgactc ttgggttgaa tttattgagc tagatattga tgagccagat 181 gaaaagactg aggaatcaga cacagacaga cttctaagca gtgaccatga gaaatcacat 241 agtaacctag gggtgaagga tggcgactct ggacgtacca gctgttgtga acctgacatt 301 ctggagactg atttcaatgc caatgacata catgagggta cctcagaggt tgctcagcca 361 cagaggttaa aaggggaagc agatctctta tgccttgacc agaagaatca aaataactca 421 ccttatcatg atgcttgccc tgctactcag cagcccagtg ttatccaagc agagaaaaac 481 aaaccacaac cacttcctac tgaaggagct gagtcaactc accaagctgc ccatattcag 541 ctaagcaatc caagttcact gtcaaacatc gacttttatg cccaggtgag cgacattaca 601 ccagcaggta gtgtggtcct ttccccgggc caaaagaata aggcagggat gtcccaatgt 661 gacatgcacc cggaaatggt ctcactctgc caagaaaact tccttatgga caatgcctac 721 ttctgtgagg cagatgccaa aaagtgcctc cctgtggctc ctcacatcaa ggttgaatca 781 cacatacagc caagcttaaa ccaagaggac atttacatca ccacagaaag ccttaccact 841 gctgctggga ggcctgggac aggagaacat gttccaggtt ctgagatgcc tgtcccagac 901 tatacctcca ttcatatagt acagtcccca cagggcctca tactcaatgc gactgccttg 961 cccttgcctg acaaagagtt tctctcatca tgtggctatg tgagcacaga ccaactgaac 1021 aaaatcatgc cttagccttt ctttggtttc ccaagagcta cgtatttaat agcaaagaat 1081 tgactggggc aataacgttt aagccaaaac aatgtttaaa ccttttttgg gggagtgaca 1141 ggatggggta tggattctaa aatgcctttt cccaaaatgt tgaaatatga tgttaaaaaa 1201 ataagaagaa tgcttaatca gatagatatt cctattgtgc aatgtaaata ttttaaagaa 1261 ttgtgtcaga ctgtttagta gcagtgattg tcttaatatt gtgggtgtta atttttgata 1321 ctaagcattg aatgactatg tttttaatgt atagtaaatc acgctttttg aaaaagcgaa 1381 aaaatcaggt ggcttttgcg gttcaggaaa attgaatgca aaccatagca caggctaatt 1441 ttttgttgtt tcttaaataa gaaacttttt tatttaaaaa actaaaaact agaggtgaga 1501 aatttaaact ataagcaaga aggcaaaaat agtttggata tgtaaaacat ttattttgac 1561 ataaagttga taaagatatt ttttaataat ttagacttca agcatggcta ttttatatta 1621 cactacacac tgtgtactgc agttggtatg acccctctaa ggagtgtagc aactacagtc 1681 taaagctggt ttaatgtttt ggccaatgca cctaaagaaa aacaaactcg ttttttacaa 1741 agccctttta tacctcccca gactccttca acaattctaa aatgattgta gtaatctgca 1801 ttattggaat ataattgttt tatctgaatt tttaaacaag tatttgttaa tttagaaaac 1861 tttaaagcgt ttgcacagat c // LOCUS HUMMHDQAR1 426 bp ds-DNA PRI 21-JUL-1990 DEFINITION Human MHC class II HLA-DQ-alpha chain gene, exon 1. ACCESSION M29613 KEYWORDS cell surface protein; class II gene; integral membrane protein; major histocompatibility complex. SEGMENT 1 of 2 SOURCE Human (haplotype HLA-D/DR) adult male DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 426) AUTHORS Jonsson,A.-K., Hyldig-Nielsen,J.-J., Servenius,B., Larhammar,D., Andersson,G., Joergensen,F., Peterson,P.A. and Rask,L. TITLE Class II genes of the human major histocompatibility complex: Comparisons of the DQ and DX alpha and beta genes JOURNAL J. Biol. Chem. 262, 8767-8777 (1987) STANDARD simple staff_review FEATURES from to/span description pept 173 + 254 MHC HLA-DQ-alpha chain precursor, exon 1 /nomgen="HLA-DQA1" /map="6p21.3" /hgml_locus_uid="LY0151Z" sigp 173 241 MHC HLA-DQ-alpha chain signal peptide matp 242 + 254 MHC HLA-DQ-alpha chain IVS 255 > 426 MHC HLA-DQ-alpha, intron A BASE COUNT 120 a 90 c 108 g 108 t ORIGIN 1 atacaaactc ttcagctagt aactgagatg tcaccatggg ggatttttct aattggccaa 61 aacctgacct ggcagggttt ggtttgggtg tcttcagatt tccttgtctt gaggccctca 121 caattgctct acagctcaga acagcaactg ctgaggctgc cttgggaaga ggatgatcct 181 aaacaaagct ctgatgctgg gggccctcgc cctgaccacc gtgatgagcc cttgtggagg 241 tgaagacatt gtgggtgagt gcatgagtga ggaatgttct ctggagctga aaaacagtaa 301 attgaaggaa aagagagaaa gcgatttgca gagaaattgt agagattcca agaccccttc 361 agtattaaga gaattaaaaa ttatagctgt tcctccttca ggaaaccaga gccccaacca 421 ctcttt // LOCUS SOYP34A 1287 bp ss-mRNA PLN 21-JUL-1990 DEFINITION Soybean oil bodies-associated protein P34 mRNA, complete cds. ACCESSION J05560 KEYWORDS oil bodies-associated protein. SOURCE Soybean (strain Century) seed, cDNA to mRNA, clone P34/1350. ORGANISM Glycine max Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Rosidae; Rosales; Fabaceaea. REFERENCE 1 (bases 1 to 1287) AUTHORS Kalinski,A.J., Weiseman,J.M., Matthews,B.F. and Herman,E.M. TITLE Molecular cloning of a protein associated with soybean oil bodies which is similar to thiol proteases of the papain family JOURNAL J. Biol. Chem. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by E.M.Herman, 18-MAY-1990. FEATURES from to/span description pept 3 1142 oil bodies-associated protein P34 precursor sigp 3 368 oil bodies-associated protein P34 signal peptide matp 369 1139 protein P34 mRNA < 1 1287 P34 protein mRNA BASE COUNT 407 a 240 c 297 g 343 t ORIGIN 1 ttatgggttt ccttgtgttg cttcttttct ccctcttagg tctctcttct agttccagca 61 tatcaactca tcgttccata ttggaccttg acctaaccaa gtttaccaca cagaaacagg 121 tgtcttcact gttccaacta tggaagagtg agcatggacg tgtctaccat aaccacgaag 181 aagaggcaaa gagacttgag attttcaaga ataactcgaa ctatatcagg gacatgaatg 241 caaacagaaa atcaccccat tctcatcgtt taggattgaa caagtttgct gacatcactc 301 ctcaagagtt cagcaaaaag tacttgcaag ctcccaagga tgtgtcgcag caaatcaaaa 361 tggccaacaa gaaaatgaag aaggaacaat attcttgtga ccatccacct gcatcatggg 421 attggaggaa aaaaggtgtc atcacccaag taaagtacca agggggctgt ggaaggggtt 481 gggcgttttc tgccacggga gccatagaac cagcacatgc aatagcaaca ggagaccttg 541 ttagcctttc tgaacaagaa ctcgtagact gtgtggaaga aagcgaaggt tgttacaatg 601 gatggcacta tcaatcgttc gaatgggttt tagaacatgg tggtattgcc actgatgatg 661 attatcctta cagagctaaa gagggtagat gcaaagccaa taagatacaa gacaaggtta 721 caattgacgg atatgaaact gtaataatgt cagatgagag tacagaatca gagacagagc 781 aagcgttctt aagcgccatc cttgagcaac caattagtgt ctcaattgat gcaaaagatt 841 ttcatttata caccggggga atttatgatg gagaaaactg tacaagtccg tatgggatta 901 atcactttgt tttacttgtg ggttatggtt cagcggatgg tgtagattac tggatagcga 961 aaaattcatg gggagaagat tggggagaag atggttacat ttggatccaa agaaacacgg 1021 gtaatttatt aggagtgtgt gggatgaatt atttcgcttc atacccaacc aaagaggaat 1081 cagaaacact ggtgtctgct cgcgttaaag gtcatcgaag agttgatcac tctcctcttt 1141 gaagccgtaa aggttcaata caacgagtgc ttgttttctt agggacaagc attgtactta 1201 tgtatgattc tgtgtaacca tgagtctcca cgttgtacta atgtgaaggg caaaaataaa 1261 acacacaaca agttcgtttt tctcaat // LOCUS XELRPS22A 531 bp ss-mRNA VRT 21-JUL-1990 DEFINITION X.laevis ribosomal protein S22, 40S subunit mRNA, complete cds. ACCESSION M34706 KEYWORDS nucleolar protein; ribosomal protein; ribosomal protein S22. SOURCE X.laevis stage 17 embryo, cDNA to mRNA. ORGANISM Xenopus laevis Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Amphibia; Lissamphibia; Anura; Archeobatrachia; Pipoidea; Pipidae. REFERENCE 1 (bases 1 to 531) AUTHORS Keiper,B.D. and Wormington,M. TITLE Nucleotide sequence and 40S subunit assembly of Xenopus laevis ribosomal protein S22 JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Wormington, 18-MAY-1990. Author Address [1]: M.Wormington University of Virginia Department of Biology Gilmer Hall Charlottesville, VA 22901 FEATURES from to/span description pept 131 490 ribosomal protein S22, 40S subunit mRNA < 1 531 ribosomal protein S22 mRNA BASE COUNT 158 a 117 c 124 g 132 t ORIGIN 1 tgtttaataa aagaaagtaa tagtaacttc aacctctaca cgtggctgtt cctgactcac 61 cgctgttcgc tcggcaagca tcggatcgca ccgtcggacg aataagtcgg tcagggaagt 121 gataagaaaa atggctttta aagacccagg caaagcccct gtagaccagg aagtggccat 181 ccatcgtatc aggattactt taacaagtcg taatgtgaag tctctggaaa aagtgtgtgc 241 tgatctgatc cgtggtgcca aagagaagaa cctgaaggtt aagggcccag tccgtatgcc 301 taccaagact cttcgtatca caaccagaaa aacaccttgc ggtgagggtt ccaaaacctg 361 ggatcgtttc cagatgcgca tccacaagcg cctgattgac ctgcacagtc cttccgagat 421 tgttaagcag atcacttcca tcagtatcga acctggtgta gaagttgaag ttactattgc 481 tgatgcataa atgacacttc tgtttaataa aagaaagtaa tgtggattgt t // LOCUS HUMSSBLA1 81 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human SS-B/La protein mRNA, partial cds. ACCESSION M35261 KEYWORDS SS-B/La antigen; SS-B/La protein; autoantigen; small nuclear ribonucleoprotein. SEGMENT 1 of 3 SOURCE Human fibroblast, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 81) AUTHORS Kohsaka,H., Yamamoto,K., Fujii,H., Miura,H., Miyasaka,N., Nishioka,K. and Miyamoto,T. TITLE Fine epitope mapping the human SS-B/La protein: Identification of a distinct autoepitope homologous to a viral gag polyprotein JOURNAL J. Clin. Invest. 85, 1566-1574 (1990) STANDARD simple staff_entry FEATURES from to/span description pept < 1 > 81 SS-B/La protein (AA at 1) BASE COUNT 36 a 14 c 15 g 16 t ORIGIN 1 gaaatcagtg aagataaaac taaaatcaga aggtctccaa gcaaacccct acctgaagtg 61 actgatgagt ataaaaatga t // LOCUS HUMSSBLA2 155 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human SS-B/La protein mRNA, partial cds. ACCESSION M35263 KEYWORDS SS-B/La antigen; SS-B/La protein; autoantigen; small nuclear ribonucleoprotein. SEGMENT 2 of 3 SOURCE Human fibroblast, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 155) AUTHORS Kohsaka,H., Yamamoto,K., Fujii,H., Miura,H., Miyasaka,N., Nishioka,K. and Miyamoto,T. TITLE Fine epitope mapping the human SS-B/La protein: Identification of a distinct autoepitope homologous to a viral gag polyprotein JOURNAL J. Clin. Invest. 85, 1566-1574 (1990) STANDARD simple staff_entry FEATURES from to/span description pept < 1 > 155 SS-B/La protein (AA at 3) BASE COUNT 81 a 19 c 30 g 25 t ORIGIN About 200 base pairs after segment 1. 1 agaagtacaa agaaacagac ctgctaatac ttttcaagga cgattacttt gccaaaaaaa 61 atgaagaaag aaaacaaaat aaagtggaag ctaaattaag agctaaacag gagcaagaag 121 caaaacaaaa gttagaagaa gatgctgaaa tgaaa // LOCUS HUMSSBLA3 192 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human SS-B/La protein mRNA, partial cds. ACCESSION M35262 KEYWORDS SS-B/La antigen; SS-B/La protein; autoantigen; small nuclear ribonucleoprotein. SEGMENT 3 of 3 SOURCE Human fibroblast, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 192) AUTHORS Kohsaka,H., Yamamoto,K., Fujii,H., Miura,H., Miyasaka,N., Nishioka,K. and Miyamoto,T. TITLE Fine epitope mapping the human SS-B/La protein: Identification of a distinct autoepitope homologous to a viral gag polyprotein JOURNAL J. Clin. Invest. 85, 1566-1574 (1990) STANDARD simple staff_entry FEATURES from to/span description pept < 1 > 192 SS-B/La protein (AA at 1) BASE COUNT 90 a 23 c 50 g 29 t ORIGIN About 170 base pairs after segment 2. 1 gccaaggaag cattgggtaa agccaaagat gcaaataatg gtaacctaca attaaggaac 61 aaagaagtga cttgggaagt actagaagga gaggtggaaa aagaagcact gaagaaaata 121 atagaagacc aacaagaatc cctaaacaaa tggaagtcaa aaggtcgtag atttaaagga 181 aaaggaaagg gt // LOCUS RATPPTA1 1757 bp ds-DNA ROD 21-JUL-1990 DEFINITION Rat tachykinin (PPT) gene, exons 1 and 2. ACCESSION M34159 KEYWORDS alternative splicing; neurokinin A; neuropeptide K; neuropeptide gamma; substance P; tachykinin. SEGMENT 1 of 4 SOURCE Rat (strain Sprague-Dawley) DNA. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1757) AUTHORS Carter,M.S. and Krause,J.E. TITLE Structure, expression and some regulatory mechanisms of the rat preprotachykinin gene encoding substance P, neurokinin A, neuropeptide K, and neuropeptide gamma JOURNAL J. Neurosci. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.E.Krause, 10-MAY-1990. FEATURES from to/span description pept 1400 + 1522 beta-preprotachykinin (PPT), exon 2 (first expressed exon) sigp 1400 1456 beta-tachykinin signal peptide (1456 could be 1471) pep$ 1400 + 1522 gamma-preprotachykinin (PPT), exon 2 (first expressed exon) sigp 1400 1456 gamma-tachykinin signal peptide (1456 could be 1471) pep$ 1400 + 1522 alpha-preprotachykinin (PPT), exon 2 (first expressed exon) sigp 1400 1456 alpha-tachykinin signal peptide (1456 could be 1471) pre-msg 866 > 1757 PPT mRNA and introns IVS 966 1390 PPT intron A IVS 1523 > 1757 PPT intron B BASE COUNT 411 a 443 c 470 g 433 t ORIGIN 1 ctgcagagct ccaaaggtaa gcatccagcc tttctagtcc cccaacaagg ctaaagggga 61 gagaggcaca attatcctct tcccacccct tctgccttca gggtgtgcct gggaagaagc 121 tgtaggggaa caaaagatgc cttagaatgg ctgatgggta agttctacat gagaaaggag 181 gtttaaattc ctctttcccc taaatgtaaa acaaacctgc cttcatcctc tgaagcggga 241 gaccggaaac acttttgcag tgctagagaa atgagaatat tctgactgat ttggtgggga 301 ggggggttgg gggggtgtgt tccagcccta gatataacac ctcataaacc ttaagacaca 361 taaagtagaa atgaaaggaa aaccccgctt gcttcatccc tctgaagtgc ttgctggtgt 421 cttagtatta ttcacaaggt tttgctgctc aagttatttg gctgtcctca aagcgcaata 481 ttccctgatg cctcttgaga gaaaagttcc ctaagtccga agcatgagtc acttcgctca 541 gttttgatga gtaatctcag gtgtcactga accttgttcg gaagaagagg ggaggggggc 601 gtcagatttg cagacggaag aaaacaggtc tctctggatt ggatggcgag acctcgactt 661 ccctaaaatt gcgtcatttc gaacccaatt tggtccagat gttatggact ccgacgggtt 721 accgtctcgg aaactctatc acgcaagcaa aaggcgaggg ggcggctaat taaatattga 781 gcagaaagtc gcgtggggag agtgtcacgt ggctctccag gctcatcacg cctgagataa 841 ataaggcgaa gcaggagcag ggactagagc gcactcggac cagctccact ccagcaccgc 901 ggcggaggag agcgaggagc gcccagcaag tgcgcacctg cggagcatca ccgggtccga 961 ccgcagtgag taccactccc gcctgccatc tgccgctgcc tggggcccgt cgtgccttgg 1021 tcagaggtgg cgtccgcccg gggtttcacc tgcagcagcc acagacccgg agagaaactg 1081 tgcaaatacc aacacctctc tttgtctgcc ttcaggcttc ggagtgtggg tcagtgggta 1141 gggggctggg acgttgagag gcaaagagag gaggacttga ggctctttgg cacgtcagta 1201 gccttcttaa agggtttgga gaaatgttcg acctggtggg tttttgtttt tgttttaatc 1261 ttggtttagc gagacctctt ctttcttcct tgtggcattg aaattcagct gctctaacgt 1321 cttgggtggc cccccgccta catatgtata acgattcttt ctctccttct ctgtctccta 1381 ctctctccag aaatccaaca tgaaaatcct cgtggcggtg gcggtctttt ttctcgtttc 1441 cactcaactg tttgcagagg aaatcggtgc caacgatgat ctaaattatt ggtccgactg 1501 gtccgacagt gaccaaatca aggtgagacc aaccgggcgt gggagctgtt gccgtcccct 1561 tgtggtagca ccctgactag cctagctgga gcctgagagg ctcattggat tgtaagggcg 1621 tcatacccgg acaaagcaca aggcttattg cccagaacta agtttctccc tgagggagga 1681 aaatgtcctg ggttcagtgt ctccccaaca gaaaaggagt tcttctttcc ttcctccctc 1741 cctccctccc tccctcc // LOCUS RATPPTA2 875 bp ds-DNA ROD 21-JUL-1990 DEFINITION Rat tachykinin (PPT) gene, exons 3 and 4. ACCESSION M34160 KEYWORDS neurokinin A; neuropeptide K; neuropeptide gamma; substance P; tachykinin. SEGMENT 2 of 4 SOURCE Rat (strain Sprague-Dawley) DNA. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 875) AUTHORS Carter,M.S. and Krause,J.E. TITLE Structure, expression and some regulatory mechanisms of the rat preprotachykinin gene encoding substance P, neurokinin A, neuropeptide K, and neuropeptide gamma JOURNAL J. Neurosci. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.E.Krause, 10-MAY-1990. FEATURES from to/span description pept + 187 283 beta-preprotachykinin (PPT), exon 3 722 + 766 beta-preprotachykinin, exon 4 matp 235 267 substance P pep$ + 187 + 283 gamma-preprotachykinin (PPT), exon 3 matp 235 267 substance P pep$ + 187 283 alpha-preprotachykinin (PPT), exon 3 722 + 766 alpha-preprotachykinin, exon 4 matp 235 267 substance P pre-msg < 1 > 875 PPT mRNA and introns IVS < 1 186 PPT intron B IVS 284 721 PPT intron C IVS 767 > 875 PPT intron D BASE COUNT 213 a 191 c 219 g 252 t ORIGIN 1 ccctgataga ctttggggga gaaggaaatc tcaggcgggt ccgggttggg gaaagtgctg 61 catagattct agtatggccc ggtctcatgc tagcggctgc ttctgtggct ctgaggaaag 121 ctcaggcaca ccgtgaatgt ggaccttgtt cacttaattt gtctactcgc tggtttgtcc 181 ctccaggagg caatgccgga gccctttgag catcttcttc agagaatcgc ccgaagaccc 241 aagcctcagc agttctttgg attaatgggc aaacgggatg ctggtgagat gagcaatagt 301 cactaggtct atcaggctac ccggtctgca tgcctgctcc ttcctggagc acccaagtgt 361 ctcttgtacc gcgagtataa ttttacatgc ctaaagactt ttgattccct gaagtcttcg 421 atccactaac acttgcacta gctcaaagtg gaggggaggg gggatccatt tcccttgctt 481 cacagcacca aggtgaccca aattggaaac taaccttagc taaacactcc cctgactaaa 541 gatcccaatt acaagggtcc tcaggtatgc taatggtcca ggctcaggtg aaagatgttt 601 tcttggattg ggttagattt ggctatacct cgctacagtg ataggaattt tcaattgcct 661 tgagttgatg gcacagtcag tggagcttgt gaagagttaa tgtcaattca tctcttgtca 721 gattcctcaa ttgaaaaaca agtggccctg ttaaaggctc tttatggtaa acatccctat 781 aatcttattt cctatatgat gatcatgtaa aagtatttga tggtataatc agacttgcag 841 tgtgcctata gagagtgtgt gtgtgtgtgt gtgtg // LOCUS RATPPTA3 2503 bp ds-DNA ROD 21-JUL-1990 DEFINITION Rat tachykinin (PPT) gene, exons 5 and 6. ACCESSION M34161 KEYWORDS neurokinin A; neuropeptide K; neuropeptide gamma; substance P; tachykinin. SEGMENT 3 of 4 SOURCE Rat (strain Sprague-Dawley) DNA. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 2503) AUTHORS Carter,M.S. and Krause,J.E. TITLE Structure, expression and some regulatory mechanisms of the rat preprotachykinin gene encoding substance P, neurokinin A, neuropeptide K, and neuropeptide gamma JOURNAL J. Neurosci. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.E.Krause, 10-MAY-1990. FEATURES from to/span description pept + 140 163 beta-preprotachykinin (PPT), exon 5 1493 + 1546 beta-preprotachykinin, exon 6 matp 1495 1524 neurokinin pep$ + 140 163 gamma-preprotachykinin (PPT), exon 5 1493 + 1546 gamma-preprotachykinin, exon 6 matp 1495 1524 neurokinin pep$ + 140 + 163 alpha-preprotachykinin (PPT), exon 5 pre-msg < 1 > 2503 PPT mRNA and introns IVS < 1 139 PPT intron D IVS 164 1492 PPT intron E IVS 1547 > 2053 PPT intron F BASE COUNT 861 a 454 c 428 g 760 t ORIGIN 1 catctacttt agtcctcaga acagcacata aataagcgtt aaatatttcg aaaatcaact 61 ccttaagttc tctggaaaag ataaaatagc tttaaaaaag aaacccatgt atctgctaac 121 tggctctctt ttcttctagg gcatggtcag atctctcaca aaagtaagtt cacaatcatt 181 tgacatttat caaatgctaa tgttaatgat agtgaatatt gcatcctgtg ttaccttttg 241 cagcacaaca tagagcccaa tggttttgat tgagataatg tagggaaaga aagacagaat 301 gtgatttgct gaatgatcac tgactagact ctttatgtag acagattacg taccaaatgc 361 acattacatt gagagaaaag atacactata gtttttagtt tatattctct ctagcgtaat 421 cacatgagca ctttccagcc tgtccagaag acgagagaga gagagagaga gagagagaga 481 gagagagaga gagagaacac ttatatacac cttctaattc atattcatga actacctttt 541 ataatggcag gaaggggatt aagtagactg ggtgaatatt tgagtagaaa atgcactcga 601 aatgtgatag agatacaggt ttattttccc ccttgatccc ataattgaat gggaacctgg 661 gagagaagag gtgcagattg cagaactgga gggtccttag agctatttcc tagttaattg 721 gatccagagg agacaggaag tcccttgggc ccctggaaat gttgcctgct tctatgaggg 781 tcatgaattg gactaaccct ggcagggtac accccaaacc attaacactg tggtctcaac 841 taacacaatg gaaactaaga aaaatcctcc ccgttgcagt atgataataa ccttccccaa 901 agccttcatc tttggggaaa aaaaatgaca tttactaagg ggttaaattt taaagaaatc 961 ttatacagca aaaaaagtaa taaaatgaat gtatcttatt aatgttaaaa aacaaattgc 1021 tttcaggaac agtattttta agtctaaatc tactaaatgt gaccccttag aatattccaa 1081 tactaaggat ctgacttaaa gttcccttgt tgagaaatgc aacatatttg gtaataaaga 1141 cataaacgtg gatgtctttt cccacacaaa aacatataat taaagtcccc caaaattcaa 1201 agctactcca gtggcaacca tatttaaaac ttcataatag ataaaacata atacagataa 1261 aagattctgc taatgtctag ataaagaact gagaaaagta ctcacaatat gttgttgcag 1321 tgtggtttgc aaggcttata taagtctttg tgggttcacc agtgggtgac atagaaacat 1381 tcatttattt attctacagg catatattca gaagcttgtt aactttgtac tagttatgag 1441 tttatttctt caaaaacata catactaaaa tacccctaaa tgtattttcc agggcataaa 1501 acagattcct ttgttggact aatgggcaaa agagctttaa attctggtat gtataaaatc 1561 atgtctgaaa atatgtaaat caacttctgt aatttttacg gaaagtaaca attttcaaca 1621 tactaaaaaa aaaaaaagga gccaatagac ttaacatgag ccatttctgt agacaaattt 1681 tcataggagc gtttgtagcc aagagtgggc agaaagctga ttaagctgat accaccacaa 1741 tgtaagtata tttctctcaa agtgccattc tgtccagcat ctgccccact tagtcactac 1801 atatcctgaa tctttggtct agtctgacac tctttttcac agatattctt aataaaatgt 1861 cctggaccct tagagagaga tgagagcttt tttacttaca aactgaagtg atgtggtact 1921 ttcatcagac taaccattta gtgattttct actagaaaaa taaatagata atgacaagca 1981 aaatgtttct aaaattactg tctctctctg aagttatgga agctcaaaat ccctgtctta 2041 atgggtggca aagaggctga gtgtagtggt gtccattcta acgccttcaa accattcttc 2101 ctgttccaga tttagaccta catttaaaag taccacacgc cccaaaccca ttttaaacct 2161 aagcgggatt ttccttggcc cagctgcata atctctcatt tatcctgctt gaactttcta 2221 cataaatgcc acagcatatc tctaaagccc ctcactgttc acctcattta atcaattata 2281 ttcaatgtta aataatccca ttattgtttt catgaaaatt ggctatcagt gaaaatgggt 2341 taaaatgata aacacctgat tagaaattaa ccagcatctg tttatgatat ttagttcaca 2401 gaaaatttat aagatgtgct ggcttaattt ttaaatatct gactcatccc caaaataggt 2461 cactctatag gtatcttaat caatgtagac atattttata ttt // LOCUS RATPPTA4 779 bp ds-DNA ROD 21-JUL-1990 DEFINITION Rat tachykinin (PPT) gene, exon 7. ACCESSION M34162 KEYWORDS neurokinin A; neuropeptide K; neuropeptide gamma; substance P; tachykinin. SEGMENT 4 of 4 SOURCE Rat (strain Sprague-Dawley) DNA. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 779) AUTHORS Carter,M.S. and Krause,J.E. TITLE Structure, expression and some regulatory mechanisms of the rat preprotachykinin gene encoding substance P, neurokinin A, neuropeptide K, and neuropeptide gamma JOURNAL J. Neurosci. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.E.Krause, 10-MAY-1990. FEATURES from to/span description pept + 7 56 beta-preprotachykinin (PPT), exon 7 pep$ + 7 56 gamma-preprotachykinin (PPT), exon 7 pep$ + 7 56 alpha-preprotachykinin (PPT), exon 7 pre-msg < 1 701 PPT mRNA and introns IVS < 1 6 PPT intron F BASE COUNT 228 a 150 c 159 g 242 t ORIGIN 1 ctgcagtggc ttatgaaaga agcgcaatgc agaactacga aagaaggcgt aaataaaccc 61 tgtaacgcac tatctattca tctccatctg tgtccgcgag cagtgagcgg taaaataaaa 121 atgtgcgcta tgaggaatga ttatttattt aatatcaaat gttgttatga gtgaaaaact 181 caaaaaagtg tttatttttt catattgtgc caataagcat tgtaattcta atgtggtgac 241 ctcctcagac agaagtagaa attagttgta acttcagcaa agcacagtgt tgatggagtt 301 gtacaagttt gccagcgatg caagtctcca aagacagaaa ggctgctgtg aggcagtgca 361 ggcggctgct gctggaggca gagaaactcc tgtgtgtctt gcgcttccct tggttgcttt 421 tatcctaatg atgtactgag agtttggtat ctgactctat ttgtatccta gcagcatgtt 481 tcctgtgttg tgactatata gagatgtttt taaaagtttc aatgtacttc tctggtcttc 541 agtcattgta tgatgtgttg tgatagctac cattttaaat aaaagaatgt atcttcagga 601 attttgtcac attctttcat taatatttat gctaaccaca ccatctctat taggatgagt 661 gtgatcaagc tgtttgggta aacacttcta tctctctcag gcacagtgca aattgagtgt 721 gcgcgcaaca cacacacaca cacacacaca cacacacaca tacctccaca cacattttt // LOCUS MXAFRZE 2493 bp ds-DNA BCT 21-JUL-1990 DEFINITION M.xanthus gliding motility regulatory protein (frzE) gene, complete cds. ACCESSION M35192 KEYWORDS gliding motility regulatory protein. SOURCE M.xanthus (strain DZF1) DNA. ORGANISM Myxococcus xanthus Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Myxobacteria; Myxococcaceae. REFERENCE 1 (bases 1 to 2493) AUTHORS McCleary,W.R. and Zusman,D.R. TITLE FrzE of Myxococcus xanthus is homologous to both CheA and CheY of Salmonella typhimurium JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by W.R.McCleary, 05-JUN-1990. FEATURES from to/span description pept 64 2397 gliding motility regulatory protein (frzE) BASE COUNT 375 a 848 c 926 g 344 t ORIGIN 1 gagctcatca agcggttcaa ggccgactag cgcttcctgg aaggggaggg gcgtacgccg 61 gccatggaca ccgaggctct caagaaatcc ctcctgaaga agttccagga ggtcaccgcc 121 gaccgcctcc agaagattca gctgggggta ttggacctgg agaaggagac cgcggaccag 181 gccgcggagg acgtcgcgcg cgagctgcac acgatgaagg gcgaggcccg catgttgggt 241 ctggccgcca tcgggcagct ggcgcacgcc gccgaggacg tcctgcgcgc agagcgcgag 301 ggcaagacgg ccaccgaggt ggccaccgac gtcctgctca gggcgtgcga cgtcctctcc 361 gatctcaacg aagacctgtc cggcgccaac acgggcaacc cggccagcga ggagatggtc 421 cgcatgctcg cggaagtctc cggacagacg ccgcccgcca tcgctggcgc acggcccgtg 481 gcgccgcctc ctgcaccgcc gccggcccct gtcgccgcgc ccgtggtgac accggcagcc 541 gtcgccgcgc cgcccgcgcc ggtgcaggct ccggtggctc cgcccccgac gcaggccccc 601 gtggccgagc cgggggcgca cgccgccgca gccgcgcctc acccggctgc cgcgcatggc 661 cgtgacgagg aggccccgag cgccgcgaag tccgcggtgg ccgaccggag catccgcgtc 721 aacgtggagg tgctcgacgc gttggggttg ctcgcgggcg acctgctggt ggagagcgcc 781 cgcggccggc tgcgcagctc ggagacggag gcgttgttcg agcgcttcag ccgcctgggg 841 gaccgcttcc tccggctggc ggaagagatc gacatctcga acgaggtgcg tgagcagttg 901 gaccgcgtgg agagcgacct ccacatgctg cgcgacgacg cgttccgctt cgtgcgccgc 961 aacgacgacg gcatcaacac gctgcacggc aacctggcga agatggcgga ccacgtggcc 1021 gaggcccggc tggtgccgct gtccaccgtg ttcgacgcct tcccgcgcgc cgttcgcgag 1081 atgtcgcgca cgcagggcaa ggaagtggac ctggtcatcg agaacgccga catcggcgtg 1141 gaccggtcca tgctgggcga cgtgcgagac gcgctggtgc acctgctgcg caactcggtg 1201 gaccacggcg tggagtcccc ggacacgcgc cagcagttgg gcaagccgct caacggccgc 1261 atccgcatcc gcgtgcgcgt ggacggcgac atgctccaca tcgaggtgga ggacgacggc 1321 cgcggcatcg acccggagcg gctgcgtcag gcggccatct ccaagcgcct catcaacgcg 1381 gtgcaggccg ccgcgctgtc ggagcgcgag gccatcgagc tcatcttccg ccccggcttc 1441 tccacccgcg accaggtcag cgagctgtct ggccgtggcg tgggcatgga cgtggtgaag 1501 cgcaaggtgg agacgctggg cggctcggtg ggcgtgagca gccgaatcgg ccgtggctcc 1561 accatcaccc tgcgcctgcc gcagtcgctg gcgttgatga aggtgctgct ggtgcgcctg 1621 ggggacgacg tctacggcat gcccgccgcg gacgtggaag ccgtcatgcg cgtcaagccg 1681 gatgaccggc tggagatctt cggcacgctg gccgtgcggc accgtggcaa gcccacggcg 1741 ctggtggcgc tggggccgct gttgggcctc aacggcggca atcgcttcga caagccaccc 1801 gcggtggtgg tgcgtcacgg cgaggaccac gcggcgctgg tggtggacgg cttcgtggac 1861 gagcgcgaag tggccgtgaa gccttgcggc ggcgagttcc tcaaggccgc gcccttcatc 1921 gccggcaccg cggcgctgga ggacgggcgc atcgccgtgc tgctccatgt cccggacatc 1981 atggcggagg tgcgacggat ggcccgcccc gtcacccagg cccccgccgc caagcgcctc 2041 cgggtgctgc tggtggacga ctcgcccatt gcccgcgcta cggaaggggc gctggtgaag 2101 gcgctggggc actcggtgga ggaagcccag gacggcgaag aggcctacgt gaaggtgcag 2161 aacaacacct acgacctcat cctcacggac gtgcagatgc ccaagctgga cgggttctcg 2221 ctggcgcggc ggctcaagtc gacgcccgcg gtggctcgca ttccggtcat catcctgtcg 2281 tcgctcgcct cgcccgagga caagcggcgc gggttggatg ccggcgcgga cgcgtacctc 2341 gtcaagggcg agctgggcgt ggaggttctc gcgcaggcca tcgaccggct gacctgagga 2401 gccaggcttg ggcggtggcg cggtagtcgc aggaatggcg tttcgggtgc tcatggtggg 2461 caaggggctg cgtgcgctcg cggcccgggg cct // LOCUS RATPCBB 463 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Rat PCB-binding protein mRNA, complete cds.. ACCESSION J05536 KEYWORDS PCB binding protein; binding protein. SOURCE Rat (strain Sprague Dawley) lung Clara cell, cDNA to mRNA, clone pPCB6. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 463) AUTHORS Nordlund-Moeller,L., Andersson,O., Ahlgren,R., Schilling,J., Gillner,M., Gustafsson,J.-A. and Lund,J. TITLE Cloning, structure, and expression of a rat binding protein for polychlorinated biphenyls: Homology to the hormonally regulated progesterone-binding protein uteroglobin JOURNAL J. Biol. Chem. 265, 1-4 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence [1] kindly submitted by J.Lund, 15-JUN-1990. FEATURES from to/span description pept 58 348 PCB binding protein precursor sigp 58 114 PCB binding protein signal peptide matp 115 345 PCB binding protein BASE COUNT 117 a 156 c 84 g 106 t ORIGIN 1 cctcacatta caacatcagc ccacatctac agacagccca agcctccggc ctctaccatg 61 aagatcgcca tcacaatcac tgtgctcatg ctgtccatct gctgcagctc agcctcttcg 121 gacatctgcc caggatttct tcaagtcctt gaggccctcc tcctaggctc agagtctaat 181 tatgaggcag ccctgaagcc tttcaaccct gcctcagacc tgcaaaatgc aggaacccag 241 ctgaagaggc tggtggatac cctcccacag gagaccagaa taaacatcgt gaagctcacg 301 gagaagatcc taacaagtcc tctgtgtgag caagatttaa gagtctgaag ctcactggat 361 ttcagagata ttctacgcta aagccccctg tcattcccct ctccctcctt gacctcccta 421 caccaacccc gccttcctct ttgcaataaa cttcgagcat ctc // LOCUS YSBCPR 2990 bp ds-DNA PLN 21-JUL-1990 DEFINITION C.tropicalis NADPH-cytochrome P450 reductase gene, complete cds. ACCESSION M35199 KEYWORDS NADPH-cytochrome P450 reductase. SOURCE C.tropicalis (ATCC 750) DNA, clone pTS1. ORGANISM Candida tropicalis Eukaryota; Plantae; Thallobionta; Basidiomycotina; Deuteromycotina. REFERENCE 1 (bases 1 to 2990) AUTHORS Sutter,T.R., Sanglard,D. and Loper,J.C. TITLE Isolation and characterization of the alkane-inducible NADPH- cytochrome P450 oxidoreductase gene from Candida tropicalis: Identification of invariant residues within similar amino acid sequences of divergent flavoproteins JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence [1] kindly submitted by T.R.Sutter, 15-JUN-1990. Author name and address T.R.Sutter CIIT, P.O. Box 12137 Research Triangle Park, NC 27709 FEATURES from to/span description pept 554 2596 NADPH-cytochrome P450 reductase signal 198 204 TATA box BASE COUNT 988 a 442 c 558 g 1002 t ORIGIN 1 tgtcatgtct attcaatgct tcgatggggg gggttgcgta gagtaaaacc ccaaaaataa 61 tggtggtggt agcggtggtc ggtgtagcat tctgcttttg tctcactcta gctcttagtg 121 aataaatgat ccgatatcga aattgcaccg ataaatcctc ctgagataaa actctaatag 181 acgaaaagaa aggacagtta tatatacaat aataattata gagatgaaat ttggtctaag 241 ttggtacaca ttacctgact gtcagaaatg atacatattt caaagtcagt atggtcccag 301 tatcgtaata cataaacgac gttgggtccc gtaattgaac atcagaagag gaacaaaaaa 361 aaaaaagaat aaaaaatttc atacgacaat cttcaaacga actgaacgag agaaaaaata 421 aaaaaaaaga ttttaaacat ttcaaatttc caatttttct ttgttttttt tttatttcta 481 ccttttattc tttttctttt cttgatccat tactgctcta tcaactaaga ctattgtttc 541 aatcgctcaa gtcatggcat tagataagtt agatttatat gttattataa cattggtggt 601 tgcaattgca gcttattttg caaagaatca gtttcttgac caacaacaag ataccgggtt 661 ccttaatact gatagtggag atggtaattc aagagatatc ttacaagctt tgaagaagaa 721 caataaaaat acgttattat tatttggatc ccaaacaggt acagcagaag attatgccaa 781 caaattgtca agagaattgc attcaagatt tggtttgaaa accatggttg ctgatttcgc 841 tgattatgat ttcgaaaact tcggagatat tactgaagat atcttggttt tctttattgt 901 tgctacttat ggtgaaggtg aaccaaccga taatgctgac gaatttcaca cttggttgac 961 tgaagaagct gacaccttga gtactttgaa atatactgtt tttggtttgg gtaattcaac 1021 ttatgaattc ttcaatgcta ttggtagaaa atttgacaga ttgttgggag aaaaaggtgg 1081 tgacagattt gctgaatacg gtgaaggtga cgatggtact ggtactttag atgaagattt 1141 cttggcctgg aaggataacg tgtttgattc cttaaagaat gatttgaatt ttgaagaaaa 1201 agagttgaaa tacgaaccaa atgttaaatt gactgaaaga gatgatttat ctggcaatga 1261 tccagatgtc tccttgggtg aaccaaatgt caaatacatt aaatctgaag gtgttgactt 1321 aactaaaggt ccatttgatc atactcatcc atttttggct agaattgtta aaactaaaga 1381 attgtttact tctgaagaca gacattgtgt tcatgttgaa tttgatattt ctgaatcaaa 1441 cttgaaatat accaccggtg atcatcttgc aatctggcca tctaactctg atgaaaacat 1501 taagcaattt gccaaatgtt ttggtttaga agacaaactt gatactgtta ttgaattgaa 1561 agctttggat tccacttatt ccatcccatt ccctaatcca atcacttatg gagctgttat 1621 tagacaccat ttggaaattt caggtcctgt ttctagacaa tttttcttat ctattgctgg 1681 atttgcccct gatgaagaaa ctaaaaagtc atttactaga attggtggtg ataagcaaga 1741 atttgctagt aaagtcaccc gtagaaaatt caacattgcc gatgctttat tatttgcttc 1801 caacaacaga ccatggtccg atgttccatt cgaattcctt attgaaaatg tccaacactt 1861 aactcctcgt tattactcca tttcttcttc ctcattaagt gaaaagcaaa ccattaatgt 1921 tactgctgtt gttgaagccg aagaagaagc tgatggaaga ccagttactg gtgttgtcac 1981 caacttgttg aagaatattg aaattgaaca aaacaaaact ggtgaaaccc caatggttca 2041 ttatgatttg aatggtccaa gaggcaaatt tagcaagttc agattgccag ttcacgttag 2101 aagatctaat ttcaaattac caaagaatag cactacccca gttattttga ttggtccagg 2161 taccggtgtt gcaccattga gaggttttgt tagagaaaga gttcaacaag ttaaaaatgg 2221 tgttaatgtt ggtaagactg tattgtttta tggatgtaga aattccgaac aagatttctt 2281 gtacaaacaa gaatggagtg aatatgcctc agtattggga gaaaatttcg aaatgtttaa 2341 tgccttctca agacaagatc caactaagaa agtttatgtt caagataaga ttttagaaaa 2401 tagtgctctt gttgatgagt tattatctag tggagcaatt atttatgttt gtggtgatgc 2461 cagtagaatg gctagagatg ttcaagctgc aattgccaag attgttgcca aaagtagaga 2521 tatccacgaa gataaagctg ctgaattggt taaatcttgg aaagttcaaa atagatacca 2581 agaagatgtc tggtaaggaa aatatgaaca tttaattaaa gttaagatta gttttggtta 2641 atattttttt tttttttagt gattgggata tgttttattt gacgtatgta tatttcatga 2701 aatatatagt tgacacatat gtatatatgt actgaataat aataaaaaaa atgacaatat 2761 gaaagattaa tgatttctac tctttggctt gcactttgtc gtcattgttg ttgttggttc 2821 tgcctggata tttagtacaa tatctccaat ttggattgga actattgtat atggcttgta 2881 aatcattttc aattttcaac caatatttat acttcatttt ggacttcaag tccaaatcgt 2941 aaatattaca agtaagttaa aatttttcac cgtcaacgat ataaacatta // LOCUS HUMCYPIIF 1825 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human cytochrome P450IIF1 protein (CYP2F) mRNA, complete cds. ACCESSION J02906 KEYWORDS cytochrome P450. SOURCE Human lung, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1825) AUTHORS Nhamburo,P.T., Kimura,S., McBride,O.W., Kozak,C.A., Gelboin,H.V. and Gonzalez,F.J. TITLE The human CYP2F gene subfamily: Identification of a cDNA encoding a new cytochrome P450, cDNA-directed expression and chromosome mapping JOURNAL Biochemistry (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by P.T.Nhamburo, 18-MAY-1990. FEATURES from to/span description pept 56 1531 cytochrome P450IIF1 /nomgen="CYP2F" /map="19q13.1-q13.2" /hgml_locus_uid="LV0170W" mRNA < 1 1813 CYP2F mRNA BASE COUNT 356 a 596 c 470 g 403 t ORIGIN 1 gcaggctcag cgcatcccag ccagtgtctc ctgcagctca gcagctgcct tcaccatgga 61 cagcataagc acagccatct tactcctgct cctggctctc gtctgtctgc tcctgaccct 121 aagctcaaga gataagggaa agctgcctcc gggacccaga cccctctcaa tcctgggaaa 181 cctgctgctg ctttgctccc aagacatgct gacttctctc actaagctga gcaaggagta 241 tggctccatg tacacagtgc acctgggacc caggcgggtg gtggtcctca gcgggtacca 301 agctgtgaag gaggccctgg tggaccaggg agaggagttt agtggccgcg gtgactaccc 361 tgcctttttc aactttacca agggcaatgg catcgccttc tccagtgggg atcgatggaa 421 ggtcctgaga cagttctcta tccagattct acggaatttc gggatgggga agagaagcat 481 tgaggagcga atcctagagg agggcagctt cctgctggcg gacgtgcgga aaactgaagg 541 cgagcccttt gaccccacgt ttgtgctgag tcgctcagtg tccaacatta tctgttccgt 601 gctcttcggc agccgcttcg actatgatga tgagcgtctg ctcaccatta tccgccttat 661 caatgacaac ttccaaatca tgagcagccc ctggggcgag ttgtacgaca tcctagaccc 721 cagattcccg agcctcctgg actgggtgcc tgggccgcac caacgcatct tccagaactt 781 caagtgcctg agagacctca tcgcccacag cgtccacgac caccaggcct cgtctccccg 841 ggacttcatc cagtgcttcc tcaccaagat ggcagaggag aaggaggacc cactgagcca 901 cttccacatg gataccctgc tgatgaccac acataacctg ctctttggcg gcaccaagac 961 ggtgagcacc acgctgcacc acgccttcct ggcactcatg aagtacccaa aagttcaagc 1021 ccgcgtgcag gaggagatcg acctcgtggt gggacgcgcg cggctgccgg cgctgaagga 1081 ccgcgcggcc atgccttaca cagacgcggt gatccacgag gtgcagcgct ttgcagacat 1141 catccccatg aacttgccgc accgcgtcac tagggacacg gcctttcgcg gcttcctgat 1201 acccaagggc accgatgtca tcaccctcct taacaccgtc cactacgacc ccagccagtt 1261 cctgacgccc caggagttca accccgagca ttttttggat gccaatcagt ccttcaagaa 1321 gagtccagcc ttcatgccct tctcagctgg gcgccgtctg tgcctgggag agctgctggc 1381 gcgcatggag ctctttctgt acctcaccgc catcctgcag agcttttcgc tgcagccgct 1441 gggtgcgccc gaggacatcg acctgacccc actcagctca ggtcttggca atttgccgcg 1501 gcctttccag ctgtgcctgc gcccgcgcta acgccccggc ccttccagat tcgcctgtga 1561 gcgatgaggc ccacccatgt gggttgctac gtccccttct tggtccacag tctgccctca 1621 tccctctggc agtcacgctg tcttccctgc atgctgtgcc tgccgcgtgc ccttccccca 1681 tccctccaat ctgtgccccg tctgcagggc agaggcagat gtggcatgtc tttttgtacc 1741 cacagagctt gttctatggc acgccctttt ctaggctttt tgtatcattt cttagtacat 1801 tgtaatagat tcaaaccagt cttgg // LOCUS MUSADA3A 891 bp ds-DNA ROD 21-JUL-1990 DEFINITION Mouse adenosine deaminase (ada) gene, 3' end. ACCESSION J05523 KEYWORDS adenosine deaminase. SOURCE Mouse fibroblast cell line B-1/200 DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 891) AUTHORS Maa,M.-C., Chinsky,J.M., Ramamurthy,V., Martin,B.D. and Kellems,R.E. TITLE Identification of transcription stop sites at the 5' and 3' ends of the murine adenosine deaminase gene JOURNAL J. Biol. Chem. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by V.Ramamurthy, 18-MAY-1990. BASE COUNT 241 a 207 c 262 g 181 t ORIGIN 1 atagctggcc accttgcctt gattctatca aaggcattcc agtcccagca tcaagcacat 61 tctgtcctta tgcctccctt tcagacatca gtcatggtgg ctagcaagca tcatgtactg 121 ggaggaccca aatacacaaa gactctcagt aaggcaaacg gtgttgtaaa ggcctacatg 181 aggggactag tgatggctaa ggatgaaggc aggcagcaaa caaagctgat gagagctgag 241 cagagcacag gagccttgaa gagccccttg gcactgtgcc cggtgtgcca gctgggtcca 301 ctgctcattc ggttggacag tgagcagccg ttgagtaggt acccgtcacg tgccaaacac 361 tgttagtcac agagggcatg agacagcctg tgctggaaca gctcagttca tagggccatg 421 gagatgggga gaaaggggcg cctctgtcag agacaagctg tggtctggga aggccttagc 481 actaaaagca ccacaatgag aagcaaccgc cagaagcagg gcccgcaggc ctttgttcca 541 gctgcaaaga gaaaggaaaa agtggggaat aagagttggg gctgcggagg gggtggggag 601 cattgtgcag gttccgtact tgaacagaaa gcagggacca acacaaggaa ggccaaaggg 661 ctcagcctgg gaaactttgt gaggctatgg aggtaagggg cagggtattc tcccgaggca 721 tagagactgt cataccaatg atggtcattg gctgggcgag cctaagaaga ctccagtttc 781 ccttgacctc agttaaatct attacatgag aaactgggtc cctgtcccca acattgtccc 841 tgttccgtgt tcctaagtca tttctgggca ataaggactg agaactctag a // LOCUS YSCG6PD 3782 bp ds-DNA PLN 21-JUL-1990 DEFINITION S.cerevisiae glucose-6-phosphate dehydrogenase (ZWF1) gene and ORF, complete cds. ACCESSION M34709 KEYWORDS glucose-6-phosphate dehydrogenase. SOURCE S.cerevisiae (strain S288C) DNA. ORGANISM Saccharomyces cerevisiae Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes; Endomycetales; Saccharomycetaceae. REFERENCE 1 (bases 1 to 3782) AUTHORS Nogae,I. and Johnston,M. TITLE Isolation and characterization of the ZWF1 gene of Saccharomyces cerevisiae, encoding glucose-6-phosphate dehydrogenase JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Johnston, 18-MAY-1990. FEATURES from to/span description pept 1585 3102 glucose-6-phosphate dehydrogenase (ZWF1) (EC 1.1.1.49) pept 246 1037 pot. ORF mRNA 1472 > 3102 ZWF1 mRNA BASE COUNT 1066 a 899 c 887 g 930 t ORIGIN 1 atcgattagc aaaaccgtag agaagatcat tgcgcataag aaacaaaaag aaaataccgg 61 tgcggaccgc aagcctctat tatctgctgt gtgtccggga tttcttatat acacggaaaa 121 gaccaaaccg cagttggtgc ctatgctgct caatgtcaag tcgcctcagc aaattacggg 181 ctcgttgatc agagctacgt tcgagagtct ctatcgcgcg tgagtccttt taccatctgt 241 cgctgatgcc atgttttgac aagaaactag aagcgtcaag gccagaatcg cttgacgatg 301 ggattgactg tgtcattacg ccacgtgaaa tagtgacaat gttacaagag ttgaatttag 361 acttcaagtc gtttcttact gaggacacaa gtttatatgg cgctatcacc gccgggtggg 421 acccgcgagt ccactgggcg tcgaatctgg gaggcacttg tggtggctat gcctaccagt 481 acgtaacggc tgtccaacga ctacacccag gaagtcagat gatagttctg gagggtagaa 541 acagcgacat tgtcgagtac cgattgctgc acgatgatcg cataatagcc gccgccagcg 601 agctttccgg gtttagaaac atccaaaatc tggtgcgtaa actgacctcg ggctccgggt 661 cagagcgcaa gaggaacatc agctctgcgg aagagagacg aacaggtcca aaggcgaact 721 cacgcgagat ggcgccagcc gccacggccg atccctacca ctcggactac atcgaggtaa 781 acgcgtgtcc gggtgcatgc atgaacggtg gtggcctact caatggcgag caaaacagtc 841 tcaagcggaa gcagttggtt cagacactga ataagcgtca cggagaggag ctagcaatgg 901 tagatcctct aaccctggga cccaagctag aagaggcggc accgcccgct ttcgctagag 961 tacgtcttcg cgcccgtcaa gcaggccgtc gaaaaggatc tcgtctctgt tgggagcacc 1021 tggtaagtaa ggtgtagttt tgcacccgtg tacataagcg tgaaatcacc acaaactgtg 1081 tgtatcaagt acatagtgac atttaaataa tagcaagaac aacaataata gtagcgctac 1141 tggaagcacc acgtaatagt ggaaaagaac tggaaaaacc gctataagat gcatactccg 1201 gcggtcttac gcggagatac aagcttccaa cggtgctaaa agcccggttt cggctcggcc 1261 ggaggaggaa gagagacgaa aaaaaaaaaa atgactaaaa aaaaaatgga atattattaa 1321 tgtgggattt ttggctcaag gtgtggtggc cccttttcta agggtggcga attcttcaat 1381 gtacggaaaa ctcgccaagg ctatcccata tataagcaaa ctgtgggttc atctatatac 1441 cgacacataa cacctaaagt ggcttcctcc tgcccctctc tcccttttct ccactcaccc 1501 ctccttctcc cccttccccc tctccaattg gctgtataga cagaaagagt aaatccaata 1561 gaatagaaaa ccacataagg caagatgagt gaaggccccg tcaaattcga aaaaaatacc 1621 gtcatatctg tctttggtgc gtcaggtgat ctggcaaaga agaagacttt tcccgcctta 1681 tttgggcttt tcagagaagg ttaccttgat ccatctacca agatcttcgg ttatgcccgg 1741 tccaaattgt ccatggagga ggacctgaag tcccgtgtcc taccccactt gaaaaaacct 1801 cacggtgaag ccgatgactc taaggtcgaa cagttcttca agatggtcag ctacatttcg 1861 ggaaattacg acacagatga aggcttcgac gaattaagaa cgcagatcga gaaattcgag 1921 aaaagtgcca acgtcgatgt cccacaccgt ctcttctatc tggccttgcc gccaagcgtt 1981 tttttgacgg tggccaagca gatcaagagt cgtgtgtacg cagagaatgg catcacccgt 2041 gtaatcgtag agaaaccttt cggccacgac ctggcctctg ccagggagct gcaaaaaaac 2101 ctgggggccc tctttaaaga agaagagttg tacagaattg accattactt gggtaaagag 2161 ttggtcaaga atcttttagt cttgaggttc ggtaaccagt ttttgaatgc ctcgtggaat 2221 agagacaaca ttcaaagcgt tcagatttcg tttaaagaga ggttcggcac cgaaggccgt 2281 ggcggctatt tcgactctat aggcataatc agagacgtga tgcagaacca tctgttacaa 2341 atcatgactc tcttgactat ggaaagaccg gtgtcttttg acccggaatc tattcgtgac 2401 gaaaaggtta aggttctaaa ggccgtggcc cccatcgaca cggacgacgt cctcttgggc 2461 cagtacggta aatctgagga cgggtctaag cccgcctacg tggatgatga cactgtagac 2521 aaggactcta aatgtgtcac ttttgcagca atgactttca acatcgaaaa cgagcgttgg 2581 gagggcgtcc ccatcatgat gcgtgccggt aaggctttga atgagtccaa ggtggagatc 2641 agactgcagt acaaagcggt cgcatcgggt gtcttcaaag acattccaaa taacgaactg 2701 gtcatcagag tgcagcccga tgccgctgtg tacctaaagt ttaatgctaa gacccctggt 2761 ctgtcaaatg ctacccaagt cacagatctg aatctaactt acgcaagcag gtaccaagac 2821 ttttggattc cagaggctta cgaggtgttg ataagagacg ccctactggg tgaccattcc 2881 aactttgtca gagatgacga attggatatc agttggggca tattcacccc attactcaag 2941 cacatagagc gtccggacgg tccaacaccg gaaatttacc cctacggatc aagaggtcca 3001 aagggattga aggaatatat gcaaaaacac aagtatgtta tgcccgaaaa gcacccttac 3061 gcttggcccg tgactaagcc agaagatacg aaggataatt agaaaaatgc aagcacattc 3121 atttatcggc taagtcactg aaattttttt tttcgagtga ttttatcttg caagctcact 3181 ctctttgttc ttttctcctc tataatggca tctccccccc accaactcct ctctacttgc 3241 gtgtgtattt gtttgtatac atgtgtaaat atatatacat aaaagaatgt cgtctcatgt 3301 attttttaac ttttagccgc ggtcagtgac attttggctt tcccaccatt ccacgtctga 3361 aaaaaaaaaa aaaaaaagag ataaaatatg aattgaatat atatcaaaaa tgtctgcaaa 3421 aatttttacg aatcagtccg attggacttg tacttatcat tgatttgctc gttatgcgtc 3481 ttatccactt gattagctat tccctgtaaa gtcttagaca ctgcctcagt ggccccaatt 3541 aacggccgaa taattgccac aggtgcagct ctagcaacat aaactgctgc ggcgctcggc 3601 cctcccggtt tatcatcctt catctgtccc tttgccctcc ataccgcatc gtacgcaata 3661 tgcatatgct tttctaatga actatacgcc tccttcaaac ccgtgggcag gtcgaggggc 3721 tgatctgcgt acagactcac tattgtgggt tcgttgtgat ctcccggtga agacatatcg 3781 at // LOCUS HLTLYS 642 bp ss-mRNA INV 21-JUL-1990 DEFINITION H.rufescens sperm lysin mRNA, complete cds. ACCESSION M34388 KEYWORDS sperm lysin. SOURCE H.rufescens testis, cDNA to mRNA, clones r13 and r14. ORGANISM Haliotis rufescens Eukaryota; Animalia; Eumetazoa; Mollusca; Gastropoda; Prosobrnachia; Archeogastropoda; Pleurotomariacea; Haliotidae. REFERENCE 1 (bases 1 to 642) AUTHORS Vacquier,V.D., Carner,K.R. and Stout,C.D. TITLE Species specific sequences of abalone sperm lysin: The sperm protein that dissolves a hole in the egg envelope JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable [or printed] sequence for [1] kindly submitted by V.D.Vacquier, 22-MAY-1990. FEATURES from to/span description pept 16 480 sperm lysin precursor sigp 16 69 sperm lysin signal peptide matp 70 477 sperm lysin mRNA < 1 642 sperm lysin mRNA signal 625 630 poly-A signal BASE COUNT 202 a 124 c 151 g 165 t ORIGIN 1 cgaacagatt acaagatgaa gctgttggtg ctttgcattt ttgcgatgat ggcgacattg 61 gcaatgtcac gcagctggca ttatgttgaa cccaagtttt taaacaaggc ttttgaagtt 121 gcactgaagg tacagatcat tgctggattc gatagagggc tggtcaaatg gcttagagtt 181 catggcagaa cattgtctac cgttcagaag aaggcgctgt acttcgtcaa tagacgttac 241 atgcagaccc actgggcgaa ttacatgctc tggataaata agaagatcga tgcactgggc 301 agaactccag ttgttggtga ctacacacgg ttaggtgccg aaattggaag acgtattgat 361 atggcttact tttacgactt cctgaaagat aagaacatga tcccaaaata tctgccatac 421 atggaagaaa ttaatagaat gcgcccggca gatgtcccag ttaaatacat gggcaagtga 481 aacccatgaa gaagacagct tcatgcaccg tgcatgtcaa cagatacaga aaacatcgtc 541 aaacacgggg agctatgaca ccatcctaac atgggttggc tatttgttgc acgattttta 601 aaacggaaag attgtacatt ccagaataaa tagatttact ac // LOCUS HLTLYS2 650 bp ss-mRNA INV 21-JUL-1990 DEFINITION H.corrugata sperm lysin mRNA, complete cds. ACCESSION M34389 KEYWORDS sperm lysin. SOURCE H.corrugata testis, cDNA to mRNA, clones p1 and p3. ORGANISM Haliotis corrugata Eukaryota; Animalia; Eumetazoa; Mollusca; Gastropoda; Prosobrnachia; Archeogastropoda; Pleurotomariacea; Haliotidae. REFERENCE 1 (bases 1 to 650) AUTHORS Vacquier,V.D., Carner,K.R. and Stout,C.D. TITLE Species specific sequences of abalone sperm lysin: The sperm protein that dissolves a hole in the egg envelope JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable [or printed] sequence for [1] kindly submitted by V.D.Vacquier, 22-MAY-1990. FEATURES from to/span description pept 16 483 sperm lysin precursor sigp 16 69 sperm lysin signal peptide matp 70 480 sperm lysin mRNA 1 650 sperm lysin mRNA signal 635 640 poly-A signal BASE COUNT 194 a 134 c 162 g 160 t ORIGIN 1 ggaacagatt acaagatgaa gctgttggtg ctttgccttt ttgcgatgat ggcgacattg 61 gctgtgtcgc gccaccgctt ccgttttatt ccacataagt atatacgcaa ggagtttgaa 121 gttgcactga aggtagagat cattgccgga ttcgatagaa cgctggtcaa atggcttaga 181 gttcatggcg gacgtttgag tacagttcag aagaaggcgc tgtacttcgt caatagacgt 241 tacatgcaga cccactggca gaattacatg ctctggatag tgaggaagac cgatgcactg 301 ggcagacctc cagttgttgc tgactacagt cggttaggtg ccgaaattgg aagacgtatt 361 gatatggcat atttttacaa cttcctgaac gggaggaaca tgatcccaaa atatctgcca 421 tacatggagg aaattaatag aatgcgcccg gcagatgtcc cagttgcaaa cagaggcaag 481 tgaaaccaac gaagaagaaa gctgcatgca ccctgcatgt caacagatac agaaaacatc 541 gtccgtcaaa cacgaggagc tgtgacagca tccatcccaa catgggttgg ctatttgttg 601 cacgatttta acacagaaag attgtacatt ccagaataaa tagatttact // LOCUS HUMROSSA 1843 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human 52 kD ribonucleoprotein Ro/SSA, complete cds. ACCESSION M34551 KEYWORDS ribonucleoprotein. SOURCE Human thymocyte, cDNA to mRNA, clone FI18.1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1843) AUTHORS Itoh,K., Itoh,Y. and Frank,M.B. TITLE Heterogeneity in human Ro/SSA ribonucleoproteins: The 52 and 60 kd Ro/SSA proteins are encoded by separate genes JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable [or printed] sequence for [1] kindly submitted by M.B.Frank, 18-MAY-1990. Author address: M.B.Frank Oklahoma Medical Res Foundation Arthritis and Immunology program 825 WE 13th St, Oklahoma City, OK 73104 FEATURES from to/span description pept 39 1466 52 kD Ro/SSA ribonucleoprotein signal 1827 1832 poly-A signal BASE COUNT 474 a 458 c 488 g 423 t ORIGIN 1 bp upstream of EcoRI site. 1 gaattcgggc acactgctgt ttaacggcac acttgacaat ggcttcagca gcacgcttga 61 caatgatgtg ggaggaggtc acatgcccta tctgcctgga ccccttcgtg gagcctgtga 121 gcatcgagtg tggccacagc ttctgccagg aatgcatctc tcaggttggg aaaggtgggg 181 gcagcgtctg tcctgtgtgc cggcagcgct ttctgctcaa gaatctccgg cccaatcgac 241 agctagccaa catggtgaac aaccttaaag aaatcagcca ggaggccaga gagggcacac 301 agggggaacg gtgtgcagtg catggagaga gacttcacct gttctgtgag aaagatggga 361 aggccctttg ctgggtatgt gcccagtctc ggaaacaccg tgaccacgcc atggtccctc 421 ttgaggaggc tgcacaggag taccaggaga agctccaggt ggcattaggg gaactgagaa 481 gaaagcagga gttggctgag aagttggaag tggaaattgc aataaagaga gcagactgga 541 agaaaacagt ggaaacacag aaatctagga ttcacgcaga gtttgtgcag caaaaaaact 601 tcctggttga agaagaacag aggcagctgc aggagctgga gaaggatgag agggagcagc 661 tgagaatcct gggggagaaa gaggccaagc tggcccagca gagccaggcc ctacaggagc 721 tcatctcaga gctagatcga aggtgccaca gctcagcact ggaactgctg caggaggtga 781 taattgtcct ggaaaggagt gagtcctgga acctgaagga cctggatatt acctctccag 841 aactcaggag tgtgtgccat gtgccagggc tgaagaagat gctgaggaca tgtgcagtcc 901 acatcactct ggatccagac acagccaatc cgtggctgat actttcagaa gatcggagac 961 aagtgaggct tggagacacc cagcagagca tacctggaaa tgaagagaga tttgatagtt 1021 atcctatggt cctgggtgcc cagcactttc actctggaaa acattactgg gaggtagatg 1081 tgacaggaaa ggaggcctgg gacctgggtg tctgcagaga ctctgtgcgc aggaaggggc 1141 actttttgct tagttccaag agtggcttct ggacaatttg gttgtggaac aaacaaaaat 1201 atgaggctgg cacctacccc cagactcccc tccaccttca ggtgcctcca tgccaagttg 1261 ggattttcct ggactatgag gctggcatgg tctccttcta caacatcact gaccatggct 1321 ccctcatcta ctccttctct gaatgtgcct ttacaggacc tctgcggccc ttcttcagtc 1381 ctggtttcaa tgatggagga aaaaacacag cccctctaac cctctgtcca ctgaatattg 1441 gatcacaagg atccactgac tattgatggc tttctctgga cactgccact ctccccattg 1501 gcaccgcttc tcagccacaa accctgcctc ttttccccat gaactctgaa ccacctttgt 1561 ctctgcagag gcatccggat cccagcaagc gagctttagc agggaagtca cttcaccatc 1621 aacattcctg ccccagatgg ctttgtgatt ccctccagtg aagcagcctc cttatatttg 1681 gcccaaactc atcttgatca accaaaaaca tgtttctgcc ttctttatgg gacttaagtt 1741 ttttttttct cctctccatc tctaggatgt cgtctttggt gagatctcta ttatatcttg 1801 tatggtttgc aaaagggctt cctaaaaata aaaacccgaa ttc // LOCUS TRBBS12 4004 bp ds-DNA INV 21-JUL-1990 DEFINITION T.brucei expression site-associated protein (BS1.1 and BS1.2) genes, 5' end and complete cds. ACCESSION M34520 KEYWORDS expression site-associated protein. SOURCE T.brucei (strain 427) bloodstream stage isolate MiTat 1.5 DNA, clone BS1.1-2. ORGANISM Trypanosoma brucei Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Kinetoplastida; Trypanosomatina; Trypanosomatidae. REFERENCE 1 (bases 1 to 4004) AUTHORS Hobbs,M.R. and Boothroyd,J.C. TITLE An expression-site-associated gene family of trypanosomes is expressed in vivo and shows homology to a VSG gene JOURNAL Mol. Biochem. Parasitol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Hobbs, 22-MAY-1990. FEATURES from to/span description pept < 1 129 expression site-associated protein (BS1.1) pept 1318 2151 expression site-associated protein (BS1.2) site 3083 3604 RIME sequence BASE COUNT 1181 a 650 c 1052 g 1121 t ORIGIN 1 bp upstream of EcoRI site. 1 gaattcaact atactgcaga accggtccgg ggacatttca cgggagcggg gtccaacgcg 61 gcagcagtac atttgagtgt ttctaccgct gcactttgtt tttcagtttt attgttggga 121 gtgctgtgaa ggaaggatgc gacagaacgt gcgctgctta gtgtgaaaga ttatggtaat 181 ggagggttgt gaaagattgg gggaacaaaa acctatttct tttatttggg ggaacaaatg 241 ggcaaaagta acgtaagttt ccagtgggag tggtatgtgt gtgtgtatgg ggctggctaa 301 ggaaagatgt gagttcggca tgtggtatgt acaagctacg aaaacgtgtg aaacaaaacg 361 agatgtaagg ggaaaatgta acaaccaact atgttaaatt tcaggagact atttttcaaa 421 tttagttaca acaaagtaaa tgtcaaataa tgccaactat aaaggaaaac tagactaatt 481 ctactgttta atgtgacgag aattgtggcg tgaaacctag taactgctta tcatggcgtc 541 gaatttcact tctccagaat ctttatttta ggtgcgctat agatgatagt ccaaagagaa 601 ggaattacaa ttattataac ccatccaaag ctatgtcaga gactcctctt ctccgagtga 661 ttcttttcta tgtcacttgt gaaggtcgat cttggaacaa tatcgaacgt gtgaagcctg 721 aaatggggcg tttttttgct tttttttttg gtggttgtta gagttatcta ccgctatggt 781 atgatgcata gaggtaacgc taaaaataag tgacaaggtg ctttagttga gcgtatggta 841 ggtggaagcg gctaatgatt gctagcagca ccaacagagg aagttaattg ttgacgtagc 901 cgtttgtgaa tgagatagaa ggttattggg tggaacatta tcttggaaag agtttttctt 961 ccactaaaaa tgtgtagagt ggtggtttcg agaaaatggt ttagatattg aggaagaaac 1021 aaggatttga ggtgcaagtt gatgcgctgt atgatttgtc ttgccgttgc tgttacttat 1081 tgttgagttg gtatttgagg aaaatgtttt ttcagtgtgc gttgttatat acggctgtga 1141 gttggtgatg tttatttgaa tgatagcttg ataggataag atgaaataat actaagcatg 1201 tattcttctg gctgttcgcc gaaatggtaa tctatgttac ccatagcacg aaaaaagttt 1261 ttttactcag taactgaagc ggaaagtttt aaaaagcata atttaaaaaa gttgataatg 1321 atgaagtttt ggtttgtgct gttggctctt ttgggaaaag aaacacatgc atattatgaa 1381 aataaaagga atgcattaaa tgcaaccgcc gctaataaag tgtgtgggct atcgaactat 1441 cttaaaggaa tagcgcacag agtaaacagc gagagtgccg tggttacgaa aaaactatca 1501 gatttgaaaa tgagaagcat ccagttgcag ttatcagtaa tgcggaacag agtgccttct 1561 ggcgagcagg attgtaaaga catcaggaca ctcttgaaaa cagtattgag gaatgagttt 1621 acattccagc aggagttgga ggaaatgagg aagccatccg cgttagcagc agctgcagct 1681 gggatagcag ctggaagact ggaagagtgg atttttgtat ttgcacaggc agcaggcagg 1741 tcatcacagt tttgcataag tgtggggaag catatcccgg ctgagcacgg caacttgcaa 1801 gaatgttttg atggaataat tggacctgaa accctttaca aaattgagga ttcacgtgta 1861 aaagagtcgg cgcagaaaag cttgcaactc catgaagtgt tatcatccat ttccttcaat 1921 agcttgggtg cggaaaatat ccgaggagga aatgggaggc atggatgtaa tttggtgaga 1981 acagatactg acggtgtatt ggaagggggg tcggtgagac ggcacaactt aacgtggggt 2041 ggtggagtga tgaattttgg atcctatcaa aacggaagta tgtacgttga gggtggtgaa 2101 tacgtgatgc tacagagtac ggtgcagtac ggtggaccga ggatccagta aagtgagcat 2161 atttaaggat gtcatccgcc tgtttgcgcg cttccaagaa gcaaaaaatg aagtgatgaa 2221 taaaataaaa actactgtgg atgaattggc gaaatgcata gggcagaaag aggttgagct 2281 cactgatgat cagctttacg aggaatttat ctgggagacc atacacagat tggagctgtc 2341 aaagagagtg agtgaacaac tctctttagg tgaagaagag gagacgatcc tgaaatctaa 2401 ctatactgca gaaccggtcc gtggactttc acggtagcgg ggtccaacgc ggcagcagta 2461 catttgagtg tttctaccgc tgcactttgt ttttcagttt tattgttggg agtgctgtga 2521 aggaaggatg cgacagaagc tgcgctgctt agtgtgaaag attatggtaa tggagggttg 2581 tgaaagattg ggggaacaaa aacctatttc ttttatttgg gggaacaaat gggcaaaagt 2641 aacgtaagtt tccagtggga gtggtatgtg tgtgtgtatg gggctggcta aggaaagatg 2701 tgagttcggc atgtggtatg tacaagctac gaaaacgtgt gaaacaaaac gagatgtaag 2761 gggaaaatgt aacaaccaac tatgttaaat ttcaggagac tatttttcaa atttagttac 2821 aacaaagtaa atgtcaaata atgccaacta taaaggaaaa ctagactaat tctactgttt 2881 aatgtgacga gaattgtggc gtgaaaccta gtaactgctt atcatggcgt cgaatttcac 2941 ttctccagaa tctttatttt agtgcgctat agatgatagt ccaaagagaa ggaattacaa 3001 ttattataac ccatccaaag ctatgtcaga gactcctctt ctccgagtga ttcttttcta 3061 tgtctcttgt gaaggtcgat ctttttgcta ccccctggcg atgccggcca cctcaacgtg 3121 gtgccagggt ccagtgaccc cgtatcattg ggggaagcca agagccagca gcgttccttt 3181 catggggaac actgctgtag ctccggctac gcatcataca gcacagggat cagcaggcgt 3241 cttgctggga caccgttttt catttgtcgg tccctgggca cgtgccagcg tcgatcagca 3301 gtatcatccg cgctaagatg ctgctgtccg gtgatgtgga cctccaaaaa aggattgcca 3361 ttttggcatc ttttggagag tccagggtgg gaggcttctc gccccatctg ctgtattccg 3421 ttcaactgcg gacgtacaac aaaaaattat agagggtgtg ttaggatgaa tgaaaaaggg 3481 agactctgcc acagtcgcca gaccgatagc actctcaggg ctctacggtg ttggctgatg 3541 gccgcgcaga ggggggaaac tctcacgaag gcacgaagaa aattcaaaaa aaaatttttg 3601 ctaccacagg ctgtaaggat aacgctggag atggagccga ctgtggtttt tcttgtgaat 3661 gcgtatcttc gtaaccggtt gttaagaagg gatcggacga aggaatttgt ctgagtatga 3721 ggtaatgtcg aggttttctt tcattggatg tagtaataat ctccaaattt gttggaacat 3781 ataatattat tgcaataaat gcttgaagag tggaattatt gatggattga cttgagtatc 3841 atgattccaa tgaacactct tataatcctt cgaatagcaa acgtatgaac aaattaacgt 3901 agcgtcatgt agacatggac atttttgtaa tgatacgact gctattgcac atctgaaaat 3961 ttctatgacg gaccagtgcc gttaatcacc gtacaattga attc // LOCUS TRBBS134 2396 bp ds-DNA INV 21-JUL-1990 DEFINITION T.brucei expression site-associated protein (BS1.3 and BS1.4) genes, 3' and 5' ends. ACCESSION M34521 KEYWORDS expression site-associated protein. SOURCE T.brucei (strain 427) bloodstream stage isolate MiTat 1.5 DNA, clone BS1.3-4. ORGANISM Trypanosoma brucei Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Kinetoplastida; Trypanosomatina; Trypanosomatidae. REFERENCE 1 (bases 1 to 2396) AUTHORS Hobbs,M.R. and Boothroyd,J.C. TITLE An expression-site-associated gene family of trypanosomes is expressed in vivo and shows homology to a VSG gene JOURNAL Mol. Biochem. Parasitol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Hobbs, 22-MAY-1990. FEATURES from to/span description pept 1836 > 2396 expression site-associated protein (BS1.4) ORF < 1 1206 expression site-associated protein (BS1.3) BASE COUNT 744 a 357 c 642 g 653 t ORIGIN 1 bp upstream of HindIII site. 1 aagcttgcaa ctccatgaag tgttatcatc catttccttc ggtagcttgg gtgtgaaaaa 61 tattcgagga ggaaatggga gggatggatg caatttggtg agaacagaca ctaacggtat 121 attaaatggg ggttcaccaa cacggcacaa cttaacgtgg ggtggtggag tgatgaattt 181 tggatcctat caaaacggaa gtatgtacgt tgagggtggt gaatacggtg atgctacaga 241 gtacggtgcg gtacggtgga ctgaagatcc cagtaaagtg agcatatttg aggatgtcat 301 tcgcctgttt gcgcgcttcc aagaagcaaa aaatgcagtg atgaggagaa taaaaactac 361 tgtggatgaa ttgacgaaat gtatagggca gaaggaggct gaactcacta atgatcagat 421 ttacgaggaa tttatctggg agaccataca cagattggag ctgtcaaaga gagtgagtga 481 acaaccctct ttaggtgaag aagaggagac aatcctgaaa tctaactata ctgcagaacc 541 tgtccgtgga cctttcacgg gagcggggtc caacacagta gcagtacatt tgagtgtttc 601 taccgctgca ctctgttgtt tagctttatt gttgggagtg ctgtgaggga aggatgcgac 661 agaaactgcg ctgcttagcg tgaaagatta tggtaatgga gggttgggaa agattggggg 721 aacaaaaacc tatttctttt atttggggga acaaatgggc aaaagtaacg tgagtttcca 781 gcgggagtgg tgtgtgtgtg catggggctg actaaggaaa gatgtaagtt cggaatgtgg 841 tatgtacaag ctacgaaaac gtgtgaaaca aaacgatatg taaggggaaa atgtaacaac 901 caactatgtt aaatttcaag agactatttt tcaaatttag ttacaacaaa gtaaatgtca 961 aataatgcca actataaagg aaaactagac taattctact gtttaatgtg acgagaattg 1021 tggcgtgaaa cctagtaacg accacgtcac gatgtggaat ttcacttctc cagaatcttt 1081 gttttagtgc gctatagatg atagtccaaa gagaaggaat tgcagttatt ataacccatc 1141 caaagataga tcaaagactc ctcttctccg agtgattctt ttctatgtca cttgtggaag 1201 gtcgatcttg gaacaatatc gaacgtgtga agcctgaaat gaggcgttat tattgcttct 1261 ctttttggtg gttgttagag ttatataccg ctatggtatg atgcacagag gtaacgctaa 1321 aaataagtga caaggcgttg tagtagggcg tatggtagtt ggaagcggct aatgattgct 1381 ggcctcacca acagaggaag ttaattgttg acgtagccgt ttgtgaatga gatagaaggt 1441 tatcgggtgg aacattatct tggaaagagt ttttcatcac ctaaaaatgt gtagagtggt 1501 ggtttggaga aaatggttta gatattgagg aggaaacaag gatttgaggt gcaagttgat 1561 gcgctgtaag atttgtatta ccgttggtgt tacttattgt tgagtgagta tttgagggaa 1621 atgttatggg aggtgcttcg ttgttacata cggctctgag tcagtggtgt tcatttgaat 1681 gaaatcttga taggataaga tgaaataata ctaagcatgt attcttctgt gctgccgccg 1741 aaatggtaat ctatcttacc tacagcacga aaaatttatt ttttttactc agtaacaaag 1801 cggaaagttt taaaagcata atttaaaaaa gtgatatgat gaggttttgg tttgtgttgt 1861 tggccctttt gggaaaaaaa acacatgcat attatgaaaa tgaaaggaat gcattaaacg 1921 caaccgccgc taataaagtt tgtgggctat cgaactatct taaaggagta gcgcacagag 1981 taaacagcga gagtgctgtg gttacggaaa aactatcaga tttgaaaatg agaagcatcc 2041 agttgcagct atcagtaatg cggaacagag tgccttctgg cgagaaggat tgtaaagaca 2101 taaggacact cttgaaaaca gtattgagga atgagtttac attccagcag gagttggagg 2161 aaatgaggaa cgcatccgcg ttagcagcag ctgcagctgg gttggcagct ggaagactgg 2221 aagagtggat ttttgtattt gcacaggcag cagacaggtc atcacagttt tgcataagtg 2281 tggggaagca tatcgcggct gagcacggca acttgcaaga atgttttgat ggaacaattg 2341 gacctgaaac cctttacaaa attgaggatt cacgtgtaaa agagtcggcg cagaaa // LOCUS TRBBS15 714 bp ss-mRNA INV 21-JUL-1990 DEFINITION T.brucei expression site-associated protein (BS1.5) gene, partial cds. ACCESSION M34522 KEYWORDS expression site-associated protein. SOURCE T.brucei (strain 427) bloodstream stage isolate MiTat 1.4, cDNA to mRNA, clone BS1.5. ORGANISM Trypanosoma brucei Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Kinetoplastida; Trypanosomatina; Trypanosomatidae. REFERENCE 1 (bases 1 to 714) AUTHORS Hobbs,M.R. and Boothroyd,J.C. TITLE An expression-site-associated gene family of trypanosomes is expressed in vivo and shows homology to a VSG gene JOURNAL Mol. Biochem. Parasitol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Hobbs, 22-MAY-1990. FEATURES from to/span description pept < 1 > 714 expression site-associated protein (BS1.5) (AA at 1) BASE COUNT 226 a 116 c 203 g 169 t ORIGIN 1 agcgagagtg ccgtggttac ggaaaaacta tcagatttga aaatgagaag catccagttg 61 cagttatcag taatgcggaa cagagtgcct tctggcgaga aggattgtaa agacatcagg 121 acactcttga aaacagtatt gaggaatgag tttacattcc agcaggagtt ggaggaaatg 181 aggaacgcat ccgcgttagc agcagctgca gctgggttgg cagctggaag actggaagag 241 tggatttttg tatttgcaca ggcagcagac aggtcatcac agttttgcat aagtgtgggg 301 aaaactatcc caccggaaca aaacaacttg caagaatgtt ttgatggaac aattggacct 361 gaaacccttt acaaaattga ggattcacgt gtaaaagagt ctgcaaagaa aagcttgcaa 421 ctccatgaag cgttatcatc catttccttc aatagtttgg gtgcggaaag tatccgagga 481 ggaaatggga aggatggatg taatttggtg agaacagaca ctgacggtat attaaatggg 541 ggttcaccaa cacggcacaa tttaacgtgg ggtggtggag tgatgaattt tggatcctat 601 caaaacggaa gtatgtacgt tgagggggga gaatacggtg atgctacaga gtacggtgca 661 gtacggtgga ctgaagatcc cagtaaagta agcatattta aggatgtcat tcgc // LOCUS HUMCALCAT 1308 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human calcineurin catalytic subunit mRNA, complete cds. ACCESSION J05480 KEYWORDS calcineurin. SOURCE Human adult cerebral cortex and 7-year-old cerebellum, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1308) AUTHORS Kincaid,R.L., Giri,P.R., Higuchi,S., Tamura,J., Dixon,S.C., Marietta,C.A., Amorese,D.A. and Martin,B.M. TITLE Cloning and characterization of molecular isoforms of the catalytic subunit of calcineurin using nonisotopic methods JOURNAL J. Biol. Chem. 265, 11312-11319 (1990) STANDARD full staff_review COMMENT Authorin submission for [1] kindly submitted by R.Kincaid, 08-MAY-1990, for release after publication. Two cDNA isoforms were found that either contained (class 1) or lacked (class 2) base pairs 535 to 564, but otherwise appeared identical; this region presumably represents an alternatively spliced exon. FEATURES from to/span description pept < 1 762 calcineurin catalytic subunit signal 921 926 poly-A signal signal 927 932 poly-A signal BASE COUNT 401 a 251 c 283 g 373 t ORIGIN 1 ttacagcaca ataacttgtt atctatactc cgagcccacg aagcccaaga tgcagggtac 61 cgcatgtaca ggaaaagcca aacaacaggc ttcccttctc taattacaat tttttcagca 121 ccaaattact tagatgtata caataacaaa gctgcagtat tgaagtatga gaacaatgtt 181 atgaatatca ggcaattcaa ctgttctcct catccatact ggctcccaaa tttcatggat 241 gtttttactt ggtcccttcc atttgttggg gaaaaagtga ctgagatgct ggtaaatgtc 301 ctcaacatct gctcagatga tgaactaggg tcagaagaag atggatttga tggtgcaaca 361 gctgcagccc ggaaagaggt gataaggaac aagatccgag caataggcaa aatggccaga 421 gtgttctcag tgctcagaga agagagtgag agtgtgctga cgctgaaagg cttgacccca 481 actggcatgc tccccagcgg agtactttct ggagggaagc aaaccctgca aagcgctact 541 gttgaggcta tcgaggctga tgaagctatc aaaggatttt caccacaaca taagatcact 601 agcttcgagg aagctaaggg cttagaccga attaatgaga ggatgccgcc tcgcagagat 661 gccatgccct ctgacgccaa ccttaactcc atcaacaagg ctctcacctc agagactaac 721 ggcacggaca gcaatggcag taatagcagc aatattcagt gaccacttac tgttcacttt 781 tttttttttt tttttttttt tttttgagct gcggggcatg atgggattgc tgcatatcag 841 cagttggatg ttcttgcctc tgacagtagc ttatttgctc tgggggccag gaattggatt 901 cagtttacac tatcattaaa aataaaaata aaaaaagggg gagagagata ataaactata 961 ttttggtggg gctggtgatt aaacacctct tttgggtatg ccttttaaaa atgcttatag 1021 agaaaaaaaa ttttaaaaag aaagctaatg ctagatatac tgcaatgtta ggggaatgaa 1081 catgttttcc tactgaattg gggacttcta gataggttaa ggttttattc tgttactgga 1141 catcaaaact ttgtctaatt tcttactcta ttgtacgttt acagtcgcag cactaaaatg 1201 gatgtcatca aacattttta acatgatgta caaactaagg actatttatt gataatgttt 1261 tgctactctt gtcagacaat ggctataaac tgaattaggc agtcttaa // LOCUS MUSCALCAT 2194 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Mouse calcineurin catalytic subunit mRNA, complete cds. ACCESSION J05479 KEYWORDS calcineurin. SOURCE Mouse (strain NIH Swiss) 18-day-old adult brain, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 2194) AUTHORS Kincaid,R.L., Giri,P.R., Higuchi,S., Tamura,J., Dixon,S.C., Marietta,C.A., Amorese,D.A. and Martin,B.M. TITLE Cloning and characterization of molecular isoforms of the catalytic subunit of calcineurin using nonisotopic methods JOURNAL J. Biol. Chem. 265, 11312-11319 (1990) STANDARD full staff_review COMMENT Authorin submission for [1] kindly submitted by R.Kincaid, 08-MAY-1990, for release after publication. Two cDNA isoforms were found that either contained (class 1) or lacked (class 2) base pairs 1414 to 1443, but otherwise appeared identical; this region presumably represents an alternatively spliced exon. FEATURES from to/span description pept 76 1641 calcineurin catalytic subunit mRNA < 1 2194 calcineurin catalytic subunit mRNA signal 1786 1791 poly-A signal signal 1792 1797 poly-A signal BASE COUNT 624 a 488 c 529 g 553 t ORIGIN 1 gcgccggtgc ggtcggggtg tgcagtcgga cgggacgagc agcgcgtcgc tgtccccccc 61 tcccggtggc tggagatgtc cgagcccaag gcgattgatc ccaagttgtc gacgaccgac 121 agggtggtga aagccgttcc atttccacca agtcaccggc tgacagcaaa ggaagtgttt 181 gataatgatg ggaaacctcg tgtggatatc ttaaaagcac atctcatgaa ggagggcagg 241 ctggaagaaa gtgttgcatt gagaataata acagagggtg cttcgattct ccgacaggaa 301 aaaaacttgc tggatatcga cgcaccagtc acagtttgtg gggacatcca tggacaattc 361 tttgacttga tgaagctctt tgaagtggga ggatctcctg ccaacactcg ctacctcttc 421 ttaggggact atgttgacag agggtacttc agtatcgaat gtgtgctgta tttgtgggcc 481 ttgaaaattc tttaccccaa aacactgttt ttacttcgcg gaaaccatga atgtaggcac 541 ctcacagagt atttcacgtt taaacaagaa tgtaaaataa agtattcaga acgcgtttat 601 gacgcctgta tggatgcctt cgactgcctt cccctggctg cgctaatgaa ccagcagttc 661 ctgtgtgtac acggtggttt gtctccagag attaacactc tagatgacat cagaaaatta 721 gaccgattca aagaaccacc tgcttatggg cccatgtgtg acatcctatg gtcagacccc 781 ctggaggact ttggaaatga gaagactcag gaacatttca ctcacaacac agtcagaggc 841 tgttcgtact tctacagtta cccagctgtg tgtgacttcc tgcagcacaa taatttgttg 901 tccatactcc gcgcccacga agcccaggat gcagggtacc gcatgtacag gaaaagccaa 961 acaacaggct tcccgtctct aattacaatc ttctcggcac caaattactt agatgtgtac 1021 aataacaaag ctgcagtgtt gaagtacgag aacaatgtga tgaacatcag gcagttcaac 1081 tgctccccgc atccgtactg gctcccaaat ttcatggatg ttttcacctg gtcgctgcca 1141 tttgttgggg agaaagtgac tgagatgctg gtcaatgttc tcaacatctg ctccgacgat 1201 gaactggggt cagaagaaga tggatttgac ggagccacgg ccgcagcccg gaaggaagtc 1261 atcagaaaca agatccgagc aataggcaaa atggccagag tgttctcagt tctcagagaa 1321 gagagtgaga gtgtcctgac actgaagggc ctgaccccaa ctggcatgct ccccagcgga 1381 gtgctctctg gcgggaaaca gactctgcaa agcgctactg ttgaggctat tgaggctgat 1441 gaagccatca aaggattttc accacaacat aagatcacta gcttcgagga ggccaagggc 1501 ttagaccgaa ttaacgagag gatgccacct cgcagagacg ccatgccctc tgacgccaac 1561 cttaactcca tcaacaaggc tctcgcctca gagactaacg gcacggacag caatggcagt 1621 aatagcagca atatccagtg accacttcct gttcactttt tttttttttt gagctgcagg 1681 gcatgatggg attgctgcat ctcagcagtt ggatgttctt gcctctgaag gtagcttgtt 1741 tgctctgggg gccaggaatt ggattcagtt tacactatca tgaaaaataa aaataaaaaa 1801 agagggagag agataataaa ctatattttg gtgagggtgg tgattaaaca cctcttttgg 1861 gtatgccttt aaaaaatgct tctagggcaa aaaagtttta aaaagaaagc taatgctagc 1921 tatactgcaa tgttagggga atgaacgcgt tttcctactg cactggggac ttttagatag 1981 gttaatgaaa ggcctttatt ctgttactgg acacgaaaac tttgtctaat ttcttatact 2041 ctattgtacc tttacagtcg cagcactaaa atggaagaca tcaaacattt ttaacagaaa 2101 aaaaaaaaga tgtaaaaact aactaaggac tatttattaa tgatgttttg ctactcctgt 2161 cagacaatgg ctataaactg aattaggcag tctt // LOCUS RATGGLUT 1060 bp ds-DNA ROD 21-JUL-1990 DEFINITION Rat gamma-glutamyltransferase gene, 5' promoter region. ACCESSION J05515 KEYWORDS gamma-glutamyltransferase. SOURCE Rat DNA. ORGANISM Rattus norvegicus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1060) AUTHORS Rajagopalan,S., Park,J.H., Patel,P., Lebovitz,R.M. and Lieberman,M.W. TITLE Cloning and analysis of the rat gamma glutamyltransferase gene JOURNAL J. Biol. Chem. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.Rajagopalan, 25-MAY-1990. BASE COUNT 235 a 277 c 275 g 273 t ORIGIN 1 cagctgcctt ctggaggacc aaactgttca ggggaaggac aggaagaaat gagcctgtgc 61 cttcaggtca gagtcatgcc tagatctggg cgggagagct acaagggata ctgaccagga 121 gatagggtgt tgtcccctcc cccctggggt ttggtatcct cctctgcctt aagagttgca 181 aatcgacttt cccacataac aggcaccaaa tccagttagg accaacccca ccttccaatc 241 caggggagag gaatgtcagc aatgcgtggg cgtgtccttc taatgtgttt tccttgagtg 301 ttgtatgtgg accatctgca tgctcggtac ccagaggcca tcaggtctct tggaacagga 361 attgttgatg tgaaatgcca tgtggttgct gggataggaa ctcaggactc cggaagaacc 421 ttctcttctc cagtccccct ctgttgtttt tttttttttt ttttttgaga tacgatctca 481 cactgtagca caggctaatc cagaactcac taggtaggtc agactgggct caaatcacag 541 cgattctgct tctgcttcct gagtgccagg gtttgcaggt gttagctatc atgcccagtc 601 ttaacatttc acacacgcca gtccaagtta ttaaaaaaca acccggcagt tgagggcagg 661 gccctcaagt cccacaactg gtgcgtgcgt accaagtcca atgcgggaaa ggcctggacc 721 cttgaaccct ttgggcggtt cacttgttag ctcttactac caaatcctgg gcttacacat 781 gaatgccagc ccctccctgc ccagttctgt gacccccttc cccgggcagc tcttgggaga 841 agtcatgcat acatggaggc ggtgccagcc tctttgactc cagagttcag cgggagacag 901 agggagctca tcacatcagg caccccagaa gagttctggg cctgcttcac gtttaacttt 961 gtgattttca ggagtaccag cctgctctaa cggtttcagg gaagattggc tgtgggtttc 1021 cgcagagtgt gggggagttc ctgcttatcc atacagctga // LOCUS YSCRGI 130 bp ds-DNA PLN 21-JUL-1990 DEFINITION Yeast 35S ribosomal RNA gene, 5' end. ACCESSION M35269 KEYWORDS 35S ribosomal RNA. SOURCE Yeast DNA. ORGANISM Saccharomyces cerevisiae Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes; Endomycetales; Saccharomycetaceae. REFERENCE 1 (bases 1 to 130) AUTHORS Riggs,D.L. and Nomura,M. TITLE Specific transcription of Saccharomyces cerevisiae 35 S rDNA by RNA polymerase I in vitro JOURNAL J. Biol. Chem. 265, 7596-7603 (1990) STANDARD simple staff_entry FEATURES from to/span description rRNA 101 > 130 35S ribosomal RNA BASE COUNT 48 a 9 c 43 g 30 t ORIGIN 1 agagggcaaa agaaaataaa agtaagattt tagtttgtaa tgggaggggg ggtttagtca 61 tggagtacaa gtgtgaggaa aagtagttgg gaggtacttc atgcgaaagc agttgaagac 121 aagttcgaaa // LOCUS ACNRRDA 1486 bp ss-rRNA RNA 21-JUL-1990 DEFINITION A.lignieresii 16S ribosomal RNA. ACCESSION M35017 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE A.lignieresii (strain ATCC 19393) rRNA. ORGANISM Actinobacillus lignieresii Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Pasteurellaceae. REFERENCE 1 (bases 1 to 1486) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1486 16S ribosomal RNA BASE COUNT 384 a 303 c 448 g 321 t 30 others ORIGIN 1 attnannant ttnatcangg ctcagattna ncgctggcgg caggcttaac acatgcaagt 61 cgaacggtaa cgggaagggn ncttncnttc tttgccgacg agtggcggac gggtgagtaa 121 tgcttgggaa tntggcttat ggagggggat aactacggga aactgtagct aataccgcgt 181 aatatcttag gattaaaggg tgggactttc gggccacctg ccataagatg agcccaagtg 241 ggattaggta gttggttagg taaaggctga ccaagccgac gatctctagc tngtctgaga 301 ggatgaccag ccacactnga actgagacac ggtccagact cctacgggag gcagcagtng 361 ggaatattgc acaatggggg gaaccctnat gcagccatgc cgcgtgaatg aagaaggcct 421 tcgggttgta aagttctttc ggtagcgagg aaggtatcaa atttnataga tttngtaatt 481 gacgttaact acagaagaag caccggctaa ctccgtgcca gcagccgcgg taatacggag 541 ggtgcgagcg ttaatcggaa taactgggcg taaagggcac gcaggcggtt nattaagtga 601 gatgtgaaag ccccgggctt aacctgggna ttgcatttca tactggtcaa ctagagtact 661 ttagggaggg ntagaattcc acgtgtagcg gtgaaatgcg tagagatgtg gaggaatacc 721 gaaggcgaag gcagcccctt gggaatgtac tgacgctcat gtgcgaaagc gtggggagca 781 aacaggatta gataccctgg tagtccacgc tgtaaacgct gtcgatttgg ggattgggct 841 ntnagtctgg tgcccgaagc taacgtgata aatcgaccgc ctggggagta cggccgcaag 901 gttaaaactc aaatgaattg acgggggccg cacaagcggt ggagcatgtg gtttaattcg 961 atgnaacgcg aagaacctta cctactcttg acatccatgg aatcttgtag agatacgaga 1021 gtgccttcgg gaaccatgag acaggtgctg catggctgtc gtcagctcgt gttgtgaaat 1081 gttgggttna gtcccgcaac gagcgcaacc cttatccttt gttgccagcg attnggtcgg 1141 gaactcnaag gagactgccg gtgatnaacc ggaggaaggt ggggatgacg tcaagtcatc 1201 atggccctta cgagtagggc tacacacgtg ctacaatggc gtatacagag ggaagcaaga 1261 tggcgacatg gagcaaatct cacaaagtac gtctaagtcc ggattggagt ctgcaactcg 1321 actccatgaa gtcggaatcg ctagtaatcg caaatcagaa tgttgcggtg aatacgttcc 1381 cgggccttgt acacaccgcc cgtcacacca tgggagtggg ttgtaccaga agtagatagc 1441 ttaaccgcaa ggggggcgtt taccacggta tgattcatga ctnggg // LOCUS BNORRDA 1532 bp ss-rRNA RNA 21-JUL-1990 DEFINITION D.nodosus 16S ribosomal RNA. ACCESSION M35016 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE D.nodosus (strain 198A; ATCC 27521) rRNA. ORGANISM Bacteroides nodosus Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Anaerobic gram-negative straight, curved and helical rods; Bacteroidaceae. REFERENCE 1 (bases 1 to 1532) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1532 16S ribosomal RNA BASE COUNT 410 a 330 c 465 g 324 t 3 others ORIGIN 1 aactgaagag tttgattctg gctcagattg aacgctggcg gcatgcttaa cacatgcaag 61 tcgaacgggg ttatgtagct tgctatgtaa cctagtggcg gacgggtgag taatatatag 121 gaatctgcct tatggtgggg gacaacgtat ggaaacgtac gctaataccg cataagattg 181 aagaatgaaa gcgggggctc gaaagacctc gcgccgtaag atgagcctat atcggattag 241 ctagttggtg gggtaagagc ctaccaaggc gacgatccgt agctggtttg agagaatgat 301 cagccacatc gggactgaga cacggcccna actcctacgg gaggcagcag tggggaatat 361 tggacnatgg ggggaaccct gatccagcaa tgccgcgtgt gtgaagaagg ccttcgggtt 421 gtaaagcact tttattagtg aagaacggtg catggttaat acccatgcaa ttgacattag 481 ctaaggaaaa agcaccggct nactccgtgc cagcagccgc ggtaatacgg agggtgcaag 541 cgttattcgg aatgactggg cgtaaagcgc acgcaggtgg ttttataagt caggtgtgaa 601 atccctgggc tcaacctagg aattgcattt gaaaccgtaa gactagagta tgtcagagga 661 aggcggaatt tccagtgtag cagtgaaatg cgtagatatt ggaaggaaca ccgatggcga 721 aggcagcctt ctggggcaat actgacactc atgtgcgaaa gcgtgggtag caaacaggat 781 tagataccct ggtagtccac gccctaaacg atgtcaacta ggtgttgggt agaaatactc 841 ggtaccgaag ctaacgcaat aagttgaccg cctggggagt acggccgcaa ggttgaaact 901 caaagaaatt gacggggacc cgcacaagcg gtggagcatg tggtttaatt cgatgcaacg 961 cgaagaacct taccaggctt tgacatccag agaattctac agagatgtgg gagtgccttc 1021 gggaactctg agacaggtgt tgcatggctg tcgtcagctc gtgtcgtgag atgttgggtt 1081 aagtcccgca acgagcgcaa cccttatcct tacttgccag cacgtaaagg tgggaactat 1141 aaggagactg ccggtgacaa accggaggaa ggtggggatg acgtcaagtc atcatggccc 1201 ttacagcctg ggctacacac gtgctacaat gggcggtaca gacggtagcc aacccgcgag 1261 ggggagccaa tctgagaaaa ccgttcgtag tccggattgc agtctgcaac tcgactgcat 1321 gaagtcggaa tcgctagtaa tcgcgaatca gcacgtcgcg gtgaatacgt tcccgggtct 1381 tgtacacact gcccgtcaca ccatgggagt ttgttgcacc agaagtaggt agcttaaccg 1441 taaggagggc gcttaccacg gtgtggccga tgactggggt gaagtcgtaa caaggtaacc 1501 gtaggggaac ctgcggttgg atcacctcct tt // LOCUS CAJSAPA 3974 bp ds-DNA BCT 21-JUL-1990 DEFINITION C.fetus surface array protein (sapA) gene, complete cds. ACCESSION J05577 KEYWORDS surface array protein. SOURCE C.fetus fetus DNA. ORGANISM Campylobacter fetus Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Aerobic/microaerophilic, motile, helical/vibrioid bacteria. REFERENCE 1 (bases 1 to 3974) AUTHORS Blaser,M.J. and Gotschlich,E.C. TITLE Surface array protein of Campylobacter fetus: Cloning and gene structure JOURNAL J. Biol. Chem. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.J.Blaser, 01-JUN-1990. FEATURES from to/span description pept 24 2825 surface array protein (sapA) binding 12 15 ribosomal binding site signal 2846 2870 transcription termination signal BASE COUNT 1293 a 641 c 785 g 1255 t ORIGIN 1 ctattttatt aaggagtcct taaatgttaa acaaaacaga tgtttcaatg ctttatatca 61 ctattatggg tatggcaagt gagggtgatg gtaataagta ttggttagat tatgccaata 121 ataatagttt aggagtttca agtttagcta atattatgct tgatagtcca ggggcggcta 181 aattctttgg tgattctctt ttagcaggta atgaaaaaga ttttgttact aagatatata 241 gtatagcttt aggtaatact agtgatgttg atggcattaa ttattggact aaggcaataa 301 ctggcggtgg agaatttact gatagtaagg gtaatgttat tagtgttgct agtttaagca 361 agggtgattt aataggtgct atgattaact ctatggttaa tggcggtagt gctgagtcta 421 aggctatatt tgaggctaag gcagctgcta gtgattactt tgccgatgct actttggtaa 481 gggatattag tggattagat gagggtacta cttctaagtt aattagcgag attaatagtg 541 ctagtgatct tgataaggtt aagagtgaga ttgatgcttt gaagagtgag ctacctaatc 601 cgggtagtac ttatgatctt acagagggta atgataattt aaagggtact gatttagacg 661 atacttttaa tgggactaca tatgtaggta atggtactaa taagagtact cttagtgcat 721 ttgataagac tagatggtcg gtgcttggga gagatacgtt gaatgcgata tttactgcaa 781 taacacgcgc tgcgctacta actgatcaag ctgaattgat aatcactaaa aggcgtacaa 841 acgtagaaaa tatcaatata atttcagatc tagaaacaag tggcgatttc gttttcaacg 901 gttatgaaaa agtaggattt aacgtacttg gcgatatagt tagctttgct accgacgcat 961 ctaaaagcgt aaatgtagaa acaacaggaa cgataactgc tttcaccgca gccggaacag 1021 gcaaagtcga tgttgtcgcc ggtaaaatct ctgcccttac ggccgattcg cgaacaagcg 1081 taaatttaac tgctacaaac gacactatca cattaaccag tgcaaacgct gctactagtg 1141 tgaatttaaa acagcggcag gccaaagacg ctacaataac atccgcaatg cagcaaaaat 1201 ataacaatag acgcaacagg attgcaacta taacttcagc tacggctgta gagaatttga 1261 cagttaaaca tgcaactaac gtagcgctaa atggtggcat ggataaactt gcaacagtta 1321 ctcttgacaa tgctgcttta actgctgcaa tagatataaa atctgcaagc acactaaatt 1381 taataaattc aagtgttaac ggaccaaaac atctctacag cagcaaaaga cgttactgta 1441 aatttaagcg agctgctgct aaggttaaat taaacacaac tgctgctacg gatcaaactg 1501 tgactcttaa agctaatgcc acagacaata gtcttgaatt tgatagcgca actgcaaaaa 1561 ctacgtcagt cactgctagt ggtagtggaa aaactttggt tatcaaaggt gctgaagtag 1621 aaactctagt taatatagac actactgcgt tcaatgcgct gcagagtgtt agcttcggca 1681 aaactggtca aggcggcaaa tttagcgtaa aaacaggtac aggcgatgat aaaatagagt 1741 ttgtaggcac aactttaact gaaggttcag taatcgatgc gccgggtaat gatactatag 1801 ctatgaaatc agctgctttg actagtgcaa atttcactat gatcaaaaac atagagaatg 1861 ttgctattag cgacgcggtg gctacggctg accttagctc ttctgcgttt aaaaactcag 1921 tcatcataac tactaaagag gctgccgata cgactttaac tataaataaa gaccaagtaa 1981 ttaattttac tgcggcagat gcaggctcag ttaagcttat tacagtgaaa ctaaatgatg 2041 taacagcgct aatgattgtt gttaaaatag tattagatgc tgccgctaaa gatactaata 2101 tagctttggg cacagcagca gccgataaag ctcttgtaat tgatacgggt atagaaactc 2161 ttaatatcac ttcgttagtt aaagctacaa gccctgaaac tacagcaaat accgtaaatg 2221 ctaaattgac agatgtaact tctatcatta tagatgggat gcaaattact ttaggtcatg 2281 ccggcactgc tggaactgac tatagtaaag tttctatgat agatgcaagt gctcttaaag 2341 ctggtcttac atttgatgca agtgctataa cattaggagc taatgctact ataaaaggtg 2401 gctctggagc tgatagtata actgttaaag gcggaaatat cgttgtagat ttagttgctg 2461 gcggagacga tactataact cttaaaaaag gtgctgagaa aacagatatt acaaccgtta 2521 ataactttaa tgctggcgat aagatagata tagctgatgc caaaaatggt actttcacat 2581 ttaataaaat tacaatgaat agcgatgcta atttagatga ttatatcact aaagcagtag 2641 caggagacgg atcaacaaac tctgctgtaa gctactcaca taatggatat acttatgtag 2701 tagttgatgg aacagctgga gctactttca ctaaagctac tgatacaatt atcaaacttt 2761 caggtacgct agatcttaaa cttagcggag ataatgttgt agttgatgat ggaagcgtaa 2821 tttaagcaat agtaattgct tgataaaaaa gccttaattt ttaaggcttt taatttgtct 2881 aaatttatct tagcttaggc gtatttattt gaaatctcgt cagacggatc gtcttaaaat 2941 aaggttttat agagacaaag tatattttag accaaacctt aataaatagt agatagtttt 3001 ttgctaagag gagctaggag aactagctcc ttgaatattt ttaaatttat ttgagttgta 3061 ttttaaattc aacatatctg ttttttgatg ttttgatcga aatttgtcta ttgtatccat 3121 cctaaaaatt tcagctcttc aactcttttt gtgtgaaatt gttctaataa ggttgataaa 3181 ttttcatatt tgtcacttgg aacaagaaaa ctctcgtctc cgactctttt caccaatttt 3241 tgtttataaa actttaaatt taaaggtttt ataagatcta tatatgaact aaactcatct 3301 ttatagctat tagctatact aaaagcgatc tgcttgaact ctttgaaatc aacgtttaaa 3361 attttacaaa gcggcttaaa atcgtttagc ctaatgtttt gacgcttacc gtttataggt 3421 aaatagctct caaatccttt tgccgtacta taaaatcccg ctgctcatca cgtgcataca 3481 taggcgcatc agcactatat ctccgcttgt tataagagaa agatttttca gcatgcagat 3541 cttccgtatt ttatgataac gctataaaca tatatcttca aaagctcctt cttttcagta 3601 tctgatagta gctctttgct tatgcgctta aaaagctttt cgctggttgt gtcatattta 3661 tttatactag tagtcctaga tacgaggcaa actcgacgac gttataatga tgattttcta 3721 gtttatcaaa tcttttaatt acgtagtgat actcgtcgtc atctcctgcc actacagcac 3781 ttcacggaac tctgattttc aacgtatttt tagcaaaact caaatgaaga tgctcattta 3841 tcagcgaggt gcggaaaata acttttgaac tggttggatt tgatctgatt ttcgaatatg 3901 gttttaaaat atagtttgaa gcagcgtctt gatggattat ctttcgttca aaatcgatat 3961 ttactaattt tttg // LOCUS CDBRRDA 1470 bp ss-rRNA RNA 21-JUL-1990 DEFINITION C.hominis 16S ribosomal RNA. ACCESSION M35014 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE C.hominis (strain ATCC 16826) rRNA. ORGANISM Cardiobacterium hominis Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods. REFERENCE 1 (bases 1 to 1470) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1470 16S ribosomal RNA BASE COUNT 373 a 331 c 466 g 296 t 4 others ORIGIN 1 actgaagagt ttgattctgg ctcagattga acgctggcgg catgcttaac acatgcaagt 61 cgaacggaaa cgatggagct tgctccaggc gtcgagtggc gaacgggtga gtaacgcatg 121 ggaatctgcc ttttgctggg ggataacgta gggaaactta cgctaatacc gcataacacc 181 taagggtgaa agcgggggac cgaaagcctc gcggcaagag atgagcccat gttggattag 241 ctagttggtg gggtaaaggc ctaccaaggc gacgatccat agctggtctg agaggatgat 301 cagccacact gggactgaga cacggcccag actccnacgg gaggcagcag tggggaatat 361 tggacnatgg ggggaaccct gatccagcaa tgccgcgtgt gtgaagaagg ccttcgggtt 421 gtaaagcact ttcagtaggg aggaaaggtg cgtagttaat acctgcgcaa ttgacgttac 481 ctacagaaga agcaccggct aactccgtgc cagcagccgc ggtaatacgg agggtgcgag 541 cgttattcgg aattactggg cgtaaagcgc acgcaggcgg ttgcccaagt cagatgtgaa 601 agccccgggc ttaacctggg aactgcattt gaaactgggc gactagagta tgaaagagga 661 aagcggaatt tccagtgtag cagtgaaatg cgtagatatt ggaaggaaca ccgatggcga 721 aggcagcttt ctgggtcgat actgacgctc atgtgcgaaa gcgtggggag caaacaggat 781 tagataccct ggtagtccac gccctaaacg atgtcaacta ggcgtcgggt tgttaaagac 841 tcggtgcngg agctaacgca ttaagttgac cgcctgggga gtacggccgc aaggttgaaa 901 ctcaaagaaa ttgacgggga cccgcncaag cggtggagca tgtggtttaa ttcgatgcaa 961 cgcgaagaac cttaccaggc cttgacatcc taggaacttg gcagagatgc cttggtgcct 1021 tcgggaacct agagacaggt gttgcatggc tgtcgtcagc tcgtgtcgtg agatgttggg 1081 ttaagtcccg caacgagcgc aacccttatc cttacttgcc agcactttgg gtgggaactg 1141 taaggagact gccggtgaca aaccggagga aggtggggat gacgtcaagt catcatggcc 1201 cttacggcct gggctacaca cgtgctacaa tggtcggtac agacggtagc gaagccgcga 1261 ggtggagcca atctgagaaa gccgatcgta gtccggattg cagtctgcaa ctcgactgca 1321 tgaagtcgga atcgctagta atcgcgaatc agcatgtcgc ggtgaatacg ttcccgggtc 1381 ttgtacacac tgcccgtcac accatgggag tttgttgcac cagaagcagg tagcttaact 1441 taggagggcg cttgccacgg tgtggccgat // LOCUS GLARGBA 763 bp ds-DNA INV 21-JUL-1990 DEFINITION G.lamblia 5.8S rRNA gene. ACCESSION M35013 KEYWORDS 5.8S ribosomal RNA; large subunit rRNA; small subunit rRNA. SOURCE G.lamblia DNA, clones B4 and C4. ORGANISM Giardia lamblia Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Zoomastigophora; Diplomonadida; Diplomonadina; Hexamitidae. REFERENCE 1 (bases 1 to 763) AUTHORS Edlind,T.D., Sharetzsky,C. and Cha,M.E. TITLE Ribosomal RNA of the primitive eukaryote Giardia lamblia: Large subunit domain I and potential processing signals JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by T.D.Edlind, 04-JUN-1990. FEATURES from to/span description rRNA 177 321 5.8S ribosomal RNA rRNA < 1 146 small subunit ribosomal RNA rRNA 372 > 763 large subunit ribosomal RNA BASE COUNT 121 a 293 c 293 g 56 t ORIGIN 1 gtacacaccg cccgtcgctc ctaccgactg ggcgcggcgg cgagcgcccc ggacgcgcga 61 agggccgcga gcccccgcgc ctggaggaag gagaagtcgt aacaaggtat ccgtaggtga 121 acctgcggat ggatccctcg cgcgccccgc gcgtcgcccc cgcggcccgg tcggcccccg 181 aacgccccgc cggcggatgc ctcggcccgg gcggcgacga agagcgcggc ggagcgcgag 241 acgcggtgcg gacccgcccg ccccgagaag caccgaccct cgaacgcagc gcgccccggc 301 gccgccgcct cggcgcccgc cgcgtgccgc gcgccgcgcc gcagagagcg ccccggggcg 361 gtcccgccgg gctgcgcggc ccgaggcggc gggggcgacg ggcggaactt aagcatatca 421 gtacgccccg gaggagaaac caaccgggat tccccgtagc ggcgagcgac gcgggaggag 481 cccgccccga aggcgcgctg tggggcgcag gcgcaggccc gccgcgaggg ggcccgaggg 541 ccccgcccga gagggtgcaa gccccgtacg gcggccggcg cctgcgcgcg agtagcgctg 601 cttgagcgtg cagcgcggaa gggaggcgcg gcccttccaa ggctaaatac gccccgggac 661 cgatagcgga ccaagtagcg cgagcgaacg gtgaaaagga cgcctgcggc cgctcaaaag 721 acctgaaccg ccgccgcgcc gccggccccg tctcgaaaca cgg // LOCUS HEIRRDA 1472 bp ss-rRNA RNA 21-JUL-1990 DEFINITION H.influenzae 16S ribosomal RNA. ACCESSION M35019 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE H.influenzae (strain ATCC 33391) rRNA. ORGANISM Haemophilus influenzae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Pasteurellaceae. REFERENCE 1 (bases 1 to 1472) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1472 16S ribosomal RNA BASE COUNT 376 a 300 c 459 g 311 t 26 others ORIGIN 1 attgaagagt ttgatcatgg ctcagattga acgctggcgg caggcttaac acatgcaagt 61 cgaacggtag caggagaaag cttgctttct tgctgacgag tggcggacgg gtgagtaatg 121 cttgggaatc tggcttatgg agggggataa cgacgggaaa ctgtcgctaa taccgcgtat 181 tatcggaaga tgaaagtgcg ggactgagag gccgcatgcc ataggangag cccaagtggg 241 attaggtagt tggtggggta aatgcctacc aagcctncga tctctagctg gtctgagang 301 atgaccagcc acactggaac tgagacacgg tccagactcc tacgggaggc agcagtgggg 361 aatattgcgc natgggggga accctgacgc agccatgccg cgtgaatgaa gaaggccttc 421 gggttgtaaa gttctttcgg tattgaggaa ggttgatgtg ttaatagcac atcaaattga 481 cgttaaatac agaagaagca ccggctnact ccgtgccagc agccgcggta atacggaggg 541 tgcgagcgtt aatcggaata actgggcgta aagggcacgc aggcggttat ttaagtgagg 601 tgtgaaagcc ccgggcttaa cctgggnatt gcatttcaga ctgggtaact agagtacttt 661 agggaggggt agaattccac gtgtagcggt gaaatgcgta gagatgtgga ggaataccga 721 aggcgaaggc agccccttgg gaatgtactg acgctcatgt gcgaaagcgt ggggagcaaa 781 caggattaga taccctggta gtccacgctg taaacgctgt cgatttnggg gttggggttn 841 aactctggca cccgtagcta acgtgataaa tcgaccgcct ggggagtacg gccgcaaggt 901 taaaactcaa atgaattgac gggggccngc ncaannggtg gagcatgtgg tttaattcga 961 tgnaacgcga agaaccttac ctactcttga catcctaaga agagctcaga gatgagcttg 1021 tgccttcggg aacttagaga caggtgctgc atggctgtcg tcagctcgtg ttgtgaaatg 1081 ttgggttnag tcccgcaacg agcgcaaccc ttatcctttg ttgccagcga cttggtcggg 1141 aactcaaagg agactgccag tgataaactg gaggaaggtn gggatgacgt caagtcatca 1201 tggcccttac gagtagggct acacacgtgc tacaatggcg tatacagagg gaagcgaagc 1261 tgcgaggtgg agcgaatctc ataaagtacg tctaagtccg gattggagtc tgcaactcga 1321 ctccatgaag tcggaatcgc tagtaatcgc gaatcagaat gtcgcggtga atacgttccc 1381 gggccttgta cacaccgccc gtcacaccnt gggagtgggt tgtaccagaa gtagatagct 1441 naacctnnnn gagggcgtnn ncnacggtan ga // LOCUS HUMIBSUB 3110 bp ss-mRNA PRI 21-JUL-1990 DEFINITION Human integrin beta-5 subunit mRNA, complete cds. ACCESSION M35011 KEYWORDS integrin. SOURCE Human placenta, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 3110) AUTHORS Suzuki,S., Huang Z,-S. and Tanihara,H. TITLE Cloning of a new integrin beta subunit exhibiting high homology with integrin beta-3 subunit JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.Suzuki, 05-JUN-1990. FEATURES from to/span description pept 30 2420 integrin beta-5 subunit BASE COUNT 726 a 809 c 887 g 688 t ORIGIN 1 cgcgccgccg ctgagggagg cgccccacca tgccgcgggc cccggcgccg ctgtacgcct 61 gcctcctggg gctctgcgcg ctcctgcccc ggctcgcagg tctcaacata tgcactagtg 121 gaagtgccac ctcatgtgaa gaatgtctgc taatccaccc aaaatgtgcc tggtgctcca 181 aagaggactt cggaagccca cggtccatca cctctcggtg tgatctgagg gcaaaccttg 241 tcaaaaatgg ctgtggaggt gagatagaga gcccagccag cagcttccat gtcctgagga 301 gcctgcccct cagcagcaag ggttcgggct ctgcaggctg ggacgtcatt cagatgacac 361 cacaggagat tgccgtgaac ctccggcccg gtgacaagac caccttccag ctacaggttc 421 gccaggtgga ggactatcct gtggacctgt actacctgat ggacctctcc ctgtccatga 481 aggatgactt ggacaatatc cggagcctgg gcaccaaact cgcggaggag atgaggaagc 541 tcaccagcaa cttccggttg ggatttgggt cttttgttga taaggacatc tctcctttct 601 cctacgcggc accgaggtac cagaccaatc cgtgcattgg ttacaagttg tttccaaatt 661 gcgtcccctc ctttgggttc cgccatctgc tgcctctcac agacagagtg gacagcttca 721 atgaggaagt tcggaaacag agggtgtccc ggaaccgaga tgcccctgag gggggctttg 781 atgcagtact ccaggcagcc gtctgcaagg agaagattgg ctggcgaaag gatgcactgc 841 atttgctggt gttcacaaca gatgatgtgc cccacatcgc attggatgga aaattgggag 901 gcctggtgca gccacacgat ggccagtgcc acctgaacga ggccaacgag tacactgcat 961 ccaaccagat ggactatcca tcccttgcct tgcttggaga gaaattggca gagaacaaca 1021 tcaacctcat ctttgcagtg acaaaaaacc attatatgct gtacaagaat tttacagccc 1081 tgatacctgg aacaacggtg gagattttag atggagactc caaaaatatt attcaactga 1141 ttattaatgc atacaatagt atccggtcta aagtggagtt gtcagtctgg gatcagcctg 1201 aggatcttaa tctcttcttt actgctacct gccaagatgg ggtatcctat cctggtcaga 1261 ggaagtgtga gggtctgaag attggggaca cggcatcttt tgaagtatca ttggaggccc 1321 gaagctgtcc cagcagacac acggagcatg tgtttgccct gcggccggtg ggattccggg 1381 acagcctgga ggtgggggtc acctacaact gcacgtgcgg ctgcagcgtg gggctggaac 1441 ccaacagcgc caggtgcaac gggagcggga cctatgtctg cggcctgtgt gagtgcagcc 1501 ccggctacct gggcaccagg tgcgagtgcc aggatgggga gaaccagagc gtgtaccaga 1561 acctgtgccg ggaggcagag ggcaagccac tgtgcagcgg gcgtggggac tgcagctgca 1621 accagtgctc ctgcttcgag agcgagtttg gcaagatcta tgggcctttc tgtgagtgcg 1681 acaacttctc ctgtgccagg aacaagggag tcctctgctc aggccatggc gagtgtcact 1741 gcggggaatg caagtgccat gcaggttaca tcggggacaa ctgtaactgc tcgacagaca 1801 tcagcacatg ccggggcaga gatggccaga tctgcagcga gcgtgggcac tgtctctgtg 1861 ggcagtgcca atgcacggag ccgggggcct ttggggagat gtgtgagaag tgccccacct 1921 gcccggatgc atgcagcacc aagagagatt gcgtcgagtg cctgctgctc cactctggga 1981 aacctgacaa ccagacctgc cacagcctat gcagggatga ggtgatcaca tgggtggaca 2041 ccatcgtgaa agatgaccag gaggctgtgc tatgtttcta caaaaccgcc aaggactgcg 2101 tcatgatgtt cacctatgtg gagctcccca gtgggaagtc caacctgacc gtcctcaggg 2161 agccagagtg tggaaacacc cccaacgcca tgaccatcct cctggctgtg gtcggtagca 2221 tcctccttgt tgggcttgca ctcctggcta tctggaagct gcttgtcacc atccacgacc 2281 ggagggagtt tgcaaagttt cagagcgagc gatccagggc ccgctatgaa atggcttcaa 2341 atccattata cagaaagcct atctccacgc acactgtgga cttcaccttc aacaaatcct 2401 acaatggcac tgtggactga tgtttccttc tccgaggggc tggagcgggg atctgatgaa 2461 aaggatcaga ctgaaacgcc ttgcacggct gctcggcttg atcacagctc cctaggtagg 2521 caccacagag aagaccttct agtgagcctg ggccaggagc ccacagtgcc tgtacaggaa 2581 ggtgcctggc catgtcacct ggctgctagg ccagagccat gccaggctgc gtccctccga 2641 gcttgggata aagcaagggg accttggcgc tctcagcttt ccctgccaca tccagcttgt 2701 tgtcccaatg aaatactgag atgctgggct gtctctccct tccaggaatg ctgggccccc 2761 agcctggcca gacaagaaga ctgtcaggaa gggtcggagt ctgtaaaacc agcatacagt 2821 ttggcttttt tcacattgat catttttata tgaaataaaa agatcctgca tttatggtgt 2881 agttctgagt cctgagactt ttctgcgtga tggctatgcc ttgcacacag gtgttggtga 2941 tggggctgtt gagatgcctg ttgaaggtac atcgtttgca aatgtgagtt tcctctcctg 3001 tccgtgtttg tttagtactt ttataatgaa aagaaacaag attgtttggg attggaagta 3061 aagattaaaa ccaaaagaat ttgtgtttgt ctgataaaaa aaaaaaaaaa // LOCUS KINRRDAA 1474 bp ss-rRNA RNA 21-JUL-1990 DEFINITION K.indologenes 16S ribosomal RNA. ACCESSION M35015 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE K.indologenes (strain ATCC 25869) rRNA. ORGANISM Kingella indologenes Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1474) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1474 16S ribosomal RNA BASE COUNT 375 a 322 c 451 g 315 t 11 others ORIGIN 1 ttgaactgaa gagtttgatt ctggctcaga ttgaacgctg gcggcatgct taacacatgc 61 aagtcgaacg agggaagcag cttgctgcng acctngtggc ggacgggtga gtaacgtata 121 ggaatctacc ttggggtggg ggataacgta tggaaacgta cgctaatacc acataacact 181 tacgagtcaa agcgggggat cttcggacct cgcgccctta gatgagccta tattggatta 241 gctagttggt rgggtaaagg cctaccaagg cgacgatcca tagctggttt gagaggatga 301 tcagccacat cgggactgag acacggcccn nactcctacg ggaggcagca gtggggaata 361 ttggncnatg ggggcaaccc tgatccagca atgccgcgtg tgtgaagaag gccttngggt 421 tgtaaagcac tttcgttagt gaagaaaggt ttatggttaa tacctgtgaa tttgacatta 481 gctaaagaag aagcaccggc taactccgtg ccagcagccg cggtaatacg gagggtgcna 541 gcgttattcg gaatgactgg gcgtaaagcg cacgcaggcg gttatttaag tcagatgtga 601 aagccccggg cttaacctgg gnattgcatt tgaaactggg taactagagt atgtgagagg 661 aaggcggaat ttccagtgta gcagtgaaat gcgtagagat tggaaggaac accgatggcg 721 aaggcagcct tctggggcaa tactgacgct catgtgcgaa agcgtgggta gcaaacagga 781 ttagataccc tggtagtcca cgccctaaac gatgtcaact aggtgttggg cacttaagtg 841 ctcggtaccg cagctaacgc attaagttga ccgcctgggg agtacggccg caaggttgaa 901 actcaaagaa attgacgggg acccgcacaa gcggtggagc atgtggttta attcgatgca 961 acgcgaagaa ccttaccagg ccttgacatc cagagaagtt accagagatg gtttcgtgcc 1021 ttcgggaact ctgagacagg tgttgcatgg ctgtcgtcag ctcgtgtcgt gagatgttgg 1081 gttaagtccc gcaacgagcg caacccttat ccttacttgc cagcacttcg ggtgggaact 1141 ataaggagac tgccggtgac aaaccggagg aaggtgggga tgacgtcaag tcatcatggc 1201 ccttacggcc tgggctacac acgtgctaca atggtcggta cagacggttg ccaacccgcg 1261 agggggagct aatctgagaa agccgatcgt agtccggatt gcactctgca actcgagtgc 1321 atgaagtcgg aatcgctagt aatcgcgaat cagaacgtcg cggtgaatac gttcccgggt 1381 cttgtacaca ctgcccgtca caccatggga gtgggttgca ccagaagtag ctagcttatc 1441 agggcggtta ccacggtgtg attcangact aggg // LOCUS MUSTNFBG 3219 bp ds-DNA ROD 21-JUL-1990 DEFINITION Mouse tumor necrosis factor-beta (lymphotoxin) gene. ACCESSION Y00137 KEYWORDS lymphotoxin; signal peptide; tumor necrosis factor. SOURCE Mouse DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 3219) AUTHORS Gray,P.W., Chen,E., Tang,W.-L. and Ruddle,N. TITLE The murine tumor necrosis factor-beta (lymphotoxin) gene sequence JOURNAL Nucleic Acids Res. 15, 3937-3937 (1987) STANDARD simple automatic REFERENCE 2 (sites for [1]) AUTHORS Fashena,S.J., Tang,W.-L., Sarr,T. and Ruddle,N.H. TITLE The murine lymphotoxin gene promoter: Characterization and negative regulation JOURNAL J. Immunol. 145, 177-183 (1990) STANDARD simple staff_entry FEATURES from to/span description pept 1632 1727 lymphotoxin precursor, exon 2 (first expressed exon) 1811 1910 lymphotoxin precursor, exon 3 2135 2547 lymphotoxin precursor, exon 4 sigp 1632 1727 lymphotoxin signal peptide 1811 1813 lymphotoxin signal peptide matp 1814 1910 lymphotoxin 2135 2547 lymphotoxin pre-msg 685 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 857 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 865 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 1114 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 1179 3121 lymphotoxin mRNA and introns (major alt.) IVS 1286 1622 put. intron I IVS 1728 1810 intron II IVS 1911 2134 intron III signal 1153 1158 put. TATA-box BASE COUNT 724 a 971 c 744 g 780 t ORIGIN 1 tgaaagctcc ctctgtacag agcattggaa gcctggggtg tacatttggg gttacatgat 61 cttggggttc taagagaata cccccaaatc atcttccaga cctggaacat tctaggacag 121 ggttctcaac cttcctaact ccatgaccct ttaatacagt tcctcatgtt gtggtgaccc 181 caaccataca attattttcg ttgctatttc ataactgtaa tttcgctgct attatgaaca 241 taatgtaaat atttgtttta aatagaggtt tgccaaagag accttgccac aggttgagac 301 tgccgctcca gagagtaagg gacacattaa aattgttaca caccagatcc cccaaatttg 361 gggagagggc actgtaatgg aacttcttga cattaaactg gcagataaac tggcagaaaa 421 aaaaaaaaaa aagctgggca gtggtggcac acacctttaa tcccagcact tgggaggcag 481 aggcaggcgg atttctgagt tctaggccag cctggtcgac agagtgagtt tcaggacagc 541 cagggctaca cagagaaacc ctgtctcgaa aaaagcaaaa aaaaaaaaaa aaaactggca 601 gatgaccaga aaatacagat atattggaat aactgtgact tgaaccccca aagacaagag 661 aggaaatagg cctgaagggg cggcaggcat gtcaagcatc cagagccctg ggttcgaacc 721 tgaaaaaaca aaggtgccgc taaccacatg tggcttcgga gccctccaga catgaccatg 781 atcgacagag agggaaatgt gcagagaagc ctgtgagcag tcaagggtgc agaagtgata 841 taaaccatca ctcttcaggg aaccaggctt ccagtcacag cccagctgta ccctctccac 901 gaattgctcg gccgttcact ggaactcctg ggcctgaccc agctccctgc tagtccctgc 961 ggcccacagt tccccggacc cgactccctt tcccagaacg cagtagtcta agcccttagc 1021 ctgcggttct ctcctaggcc ccagcctttc ctgccttcga ctgaaacagc agcatcttct 1081 aagcctgggg cttccccaag ccccagcccc gacctagaac ccgcccgctg cctgccacac 1141 tgccgcttcc tctataaagg gacccgacgc cagcgcccag gaccccgcac agcaggtgag 1201 cctctcctac cctgtctcct tgggcttacc ctggtatcag gcatccctca ggatccccag 1261 ccttaatggg tctggtcctc ctgtcgtggc tttgattttt ggtctgttcc tgtggcggcc 1321 ttatcagtct ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct 1381 ctctctctct ctctttctct ctctctgcct ctgttagcca ttgtctgttt ctatggtgga 1441 gctttcctct tcccctctgt ctctccttat ccctgctcac ttcagggttc ccctgcctgt 1501 ccccttttct gtctgtcgcc ctgtctctca gggtggctgt ctcagctggg aggtaaggtc 1561 tgtcttcctc tgtgtgcccc gcctccgcta cacacacaca ctctctctct ctctctcagc 1621 aggttctcca catgacactg ctcggccgtc tccacctctt gagggtgctt ggcacccctc 1681 ctgtcttcct cctggggctg ctgctggccc tgcctctagg ggcccaggtg aggcagcaag 1741 agattggggg tgctggggtg gcctagctaa ctcagagtcc tagagtcctc tccactctct 1801 tctgtcccag ggactctctg gtgtccgctt ctccgctgcc aggacagccc atccactccc 1861 tcagaagcac ttgacccatg gcatcctgaa acctgctgct caccttgttg gtaaacttct 1921 gcctccagag gagaggtcca gtccctgcct tttgtcctac ttgcccaggg gcccaggcga 1981 tcttcccatc tccccacacc aacttttctt accctaaggg caggcacccc actcccaatc 2041 tccctaccaa ccatcccact tgtccagtgc ctgctcctca gggatgggga cctctgatct 2101 tgatagcccc ccaatgtctt gtgcctcttc ccagggtacc ccagcaagca gaactcactg 2161 ctctggagag caagcacgga tcgtgccttt ctccgacatg gcttctcttt gagcaacaac 2221 tccctcctga tccccaccag tggcctctac tttgtctact cccaggtggt tttctctgga 2281 gaaagctgct cccccagggc cattcccact cccatctacc tggcacacga ggtccagctc 2341 ttttcctccc aatacccctt ccatgtgcct ctcctcagtg cgcagaagtc tgtgtatccg 2401 ggacttcaag gaccgtgggt gcgctcaatg taccaggggg ctgtgttcct gctcagtaag 2461 ggagaccagc tgtccaccca caccgacggc atctcccatc tacacttcag ccccagcagt 2521 gtattctttg gagcctttgc actgtagatt ctaaagaaac ccaagaattg gattccaggc 2581 ctccatcctg accgttgttt caagggtcac atccccacag tctccagcct tccccactaa 2641 aataacctgg agctctcacg ggagtctgag acacttcagg ggactacatc ttccccaggg 2701 ccactccaga tgctcagggg acgactcaag cctacctaga agttcctgca cagagcaggg 2761 tttttgtggg tctaggtcgg acagagacct ggacatgaag gagggacaga catgggagag 2821 gtggctggga acaggggaag gttgactatt tatggagaga aaagttaagt tatttattta 2881 tagagaatag aaagagggga aaaatagaaa gccgtcagat gacaactagg tcccagacac 2941 aaaggtgtct cacctcagac aggacccatc taagagagag atggcgagag aattagatgt 3001 gggtgaccaa ggggttctag aagaaagcac gaagctctaa aagccagcca ctgcttggct 3061 agacatccac agggaccccc tgcaccatct gtgaaaccca ataaacctct tttctctgag 3121 attctgtctg cttgtgtctg tcttgcgttg ggggagaaac ttcctggtct ctttaaggag 3181 tggagcaggg gacagaggcc tcagttggcc atgggatcc // LOCUS NGORRDAA 1478 bp ss-rRNA RNA 21-JUL-1990 DEFINITION N.denitrificans 16S ribosomal RNA. ACCESSION M35020 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE N.denitrificans (strain ATCC 14686) rRNA. ORGANISM Neisseria denitrificans Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1478) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1478 16S ribosomal RNA BASE COUNT 380 a 331 c 448 g 308 t 11 others ORIGIN 1 aacataagag tttgatcctg gctcagattg aacgctggcg gcatgcttta cacatgcaag 61 tcgaacggca gcggagaagt gcttgcactt ctgccggcga gtggcgaacg ggtgagtaac 121 atattggaac gtaccgagta atgggggata actaatcgaa agattagcta ataccgcata 181 cgtcctgagg gagaaagcgg gggatcttcg gacctcgcgt tattcgagcg gccaatatct 241 gattagctag ttggtggggt aaaggcctac caaggcgacg atcagtagcg ggtctgagag 301 gatgatccgc cacactggga ctgagacacg gcccagactc ctacgggagg cagcagtggg 361 gaattttgga cgatgggcgc aagcctgatc cagccatgcc gcgtgtatga agaaggcctt 421 cgggttgtaa agtacttttg tnngggaaga aaagggattt gctaataccg aatcctcatg 481 acggtacctn aagaataagc accggctaac tacgtgccag nanccgcggn natacgtagg 541 gtgcgagcgt taatcggaat tactgggcgt aaagcgagcg cagacggtta cttaagcagg 601 atgtgaaatc cccgagctca acttgggaac tgcgttctga actgggtagc tagagtatgt 661 cngagggggg tagaattcca cgtgtagcag tgaaatgcgt agagatgtgg aggaataccg 721 atggcgaagg cagccccctg ggataatact gacgttcatg ctcgaaagcg tgggtagcaa 781 acaggattag ataccctggt agtccacgcc ctaaacgatg tcgattagct gttggggtac 841 ttgatacctt agtagcgtag ctaacgcgtg aaattgaccg cctggggagt acggtcgcaa 901 gattaaaact caaaggaatt gacggggacc cgcacaagcg gtggatgatg tggattaatt 961 cgatgcaacg cgaagaacct tacctggtct tgacatgtac ggaatctccc agagacggga 1021 gngtgccttc gggagccgta acacaggtgc tgcatggctg tcgtcagctc gtgtcgtgag 1081 atgttgggtt aagtcccgca acgagcgcaa cccttgtcat tagttgccat cattcagttg 1141 ggcactctaa tgagactgcc ggtgacaaac cggaggaagg tggggatgac gtcaagtcct 1201 catggccctt atgaccaggg cttcacacgt catacaatgg tcggtacaga gggtagccaa 1261 gccgcgaggt ggagccaatc tcacaaaacc gatcgtagtc cggattgcac tctgcaactc 1321 gagtgcatga agtcggaatc gctagtaatc gcaggtcagc atactgcggt gaatacgttc 1381 ccgggtcttg tacacaccgc ccgtcacacc ntgggagtgg gggataccag aagtaggtag 1441 ggtaaccgca aggagcccnc ttaccacggt atacttca // LOCUS PASRRDA 1481 bp ss-rRNA RNA 21-JUL-1990 DEFINITION P.multocida 16S ribosomal RNA. ACCESSION M35018 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE P.multocida (strain NCTC 10322) rRNA. ORGANISM Pasteurella multocida Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Pasteurellaceae. REFERENCE 1 (bases 1 to 1481) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1481 16S ribosomal RNA BASE COUNT 374 a 305 c 459 g 321 t 22 others ORIGIN 1 attgnagagt ttgancangg ctcagattga ncgctggcgg caggcttaac acatgcaagt 61 cgaacggtag caggaagaaa gcttnctttc tttgctgacg agtggcggac gggtgagtaa 121 tgcttgggna tctggcttat ggagggggat aactgtggga aactgcagct aataccgcgt 181 attctcttag gaggaaaggg tgggaccttn gggccacctg ccataagatg agcccaagtg 241 ggattaggta gttggtgggg taaaggccta ccaagcctnc gatctctagc tngtctgaga 301 ggatgaccag ccacactgga actgagacac ggtccagact cctacgggag gcagcagtgg 361 ggaatattgc gcaatggggg gaaccctgac gcagccatgc cgcgtgaatg aagaaggcct 421 tcgggttgta aagttctttc ggtnatgagg aagggatgtt nttaaataga tagcatcatt 481 gacgttaatt ncagaagaag caccggctna ctccgtgcca gcagccgcgg taatacggag 541 ggtgcgagcg ttaatcggaa taactgggcg taaagggcac gcaggcggac ttttaagtga 601 gatgtgaaat ccccgagctt aacttgggaa ctgcatttca gactgggagt ctagagtnct 661 ttagggaggg ntagaattcc acgtgtagcg gtgaaatgcg tagagatgtg gaggaatacc 721 gaaggcgaag gcagcccctt gggaatgtac tgacgctcat gtgcnaaagc gtggggagca 781 aacaggatta gataccctgg tagtccacgc tgtaaacgct gtcgatttgg ggattgggct 841 ntntgcttgg tgcccgaagc taacgtgata aatcgaccgc ctggggagta cggccgcaag 901 gttaaaactc aaatgaattg acgggggccg cacaagcggt ggagcatgtg gtttaattcg 961 atgnaacgcg aagaacctta cctactcttg acatcctaag aagagctcag agatgagctt 1021 gtgccttcgg gaacttagag acaggtgctg catggctgtc gtcagctcgt gttgtgaaat 1081 gttgggttaa gtcccgcaac gagcgcaacc cttatccttt gttgccagcg attcggtcgg 1141 gaactcaaag gagactgcca gtgannaact ggaggaaggt ggggatgacg tcaagtcatc 1201 atggccctta cgagtagggc tacacacgtg ctacaatggt gcatacagag ggcagcgaga 1261 gtgcgagctt gagcgaatct cagaaagtgc atctaagtcc ggattggagt ctgcaactcg 1321 actccatgaa gtcggaatcg ctagtaatcg caaatcagaa tgttgcggtg aatacgttcc 1381 cgggccttgt acacaccgcc cgtcacacca tgggagtggg ttgtaccaga agtagatagc 1441 ttaaccntcg ggggggcgtt taccacggta tgattcatga c // LOCUS RATSUBB 1124 bp ss-mRNA ROD 21-JUL-1990 DEFINITION Rat F-0-ATPase subunit b mRNA, complete cds. ACCESSION M35052 KEYWORDS F-0-ATPase subunit b. SOURCE Rat (strain Wistar) liver, cDNA to mRNA. ORGANISM Rattus rattus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1124) AUTHORS Tsurumi,C., Yoshihara,Y., Osaka,F., Yamada,F., Tani,I., Higuti,T., Shimizu,M., Oeda,K., Ohkawa,H., Toda,H., Kakuno,T., Sakiyama,F., Kumatori,A., Tanaka,K. and Ichihara,A. TITLE cDNA cloning and sequencing for the import precursor of subunit b in H+-ATP synthase from rat mitochondria JOURNAL Biochem. Biophys. Res. Commun. 169, 136-142 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by T.Higuti, 04-JUN-1990. FEATURES from to/span description pept 60 830 F-0-ATPase subunit b precursor sigp 60 185 F-0-ATPase subunit b signal peptide matp 186 827 F-0-ATPase subunit b signal 1106 1111 poly-A signal BASE COUNT 323 a 241 c 266 g 294 t ORIGIN 1 gagtgtctcg ggtcggggtc acagggacat cggtaccgct gtctggatct tcgcagacaa 61 tgctgtcccg ggtggtactt tctgccgccg ccacagcggc cccgtgtctg aagaacgcgg 121 ccgtcctggg tccaggggtt ttacaggcaa caagggtctt tcacacagga cagcctcgcc 181 ttgcccctct accacctctt cctgaatatg gaggaaaagt acgtcttggg ctgattcctg 241 aggaattttt ccagttcctt taccctaaga ctggtgtaac aggaccctac gtgcttggaa 301 ctgggcttag cttgtacttt ctatccaaag aaatatatgt gattacccca gagaccttct 361 ctaccatatc agtagtaggg ttgattgtct atgtgattaa gaaatatggc gcctctattg 421 gagaatttat tgacaaactt aatgaggaaa aaattgctca actagaagaa ataaagcagt 481 caagcatgaa gcaaatccag gatgcaatca acagggagaa ggcacagcag gcactggttc 541 agaagcgcca ctacctcttc gatgttcaga ggaataacat tgccctggcc ttggaggtca 601 cttaccggga acgactacat aaagcatata aggaggtaaa gaatcgcctg gactaccata 661 tttctgtaca ggacatgatg cgtcgcaagg agggagagca catgataaac tgggtggaga 721 agcatgtgat acagagcatt tctgcacagc aggaaaagga gaccattgcc aagtgcatcg 781 gagatctaaa gatgcttgca aagaaggctc aagctcagcc aattatgtga atgtgtctat 841 ctcagttgtg atagccagag agggttaact taaatgagaa ctactctact tgaagaactc 901 tttctgtatt gctgtctaat gaaattgtgg tgtacctttc ctaagaaatg atcaaggtcc 961 atttagtggc ttaaccctat ttctgatcct tgctctgtat tcggagttgt ctgatcacat 1021 ttgagtaagc aatttgcagc aactcgctgc ccaacagaaa ttaccaagtt atagtttaaa 1081 cttgtaatta gttaaaacat cttacaataa aatgtttgaa acag //