Path: utzoo!attcan!uunet!ns-mx!iowasp.physics.uiowa.edu!ceres.physics.uiowa.edu!zaphod.mps.ohio-state.edu!uwm.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: Date: 22 Jul 90 12:00:04 GMT Sender: root@genbank.BIO.NET Distribution: bionet Lines: 145 Approved: lear@genbank.bio.net Checksum: 20137 8 LOCUS BORFLAG 684 bp ds-DNA BCT 22-JUL-1990 DEFINITION B.burgdorferei flagellin gene, 5' end. ACCESSION M34710 KEYWORDS flagellin. SOURCE B.burgdorferei (strain B31; isolate ATCC #35210) DNA. ORGANISM Borrelia burgdorferei Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes; Spirochaetales; Spirochaetaceae. REFERENCE 1 (bases 201 to 684) AUTHORS Picken,R.N. TITLE Nucleotide sequence of the flagellin gene of Borrelia hermsii and identification of oligonucleotides for the specific amplification and detection of Borrelia burgdorferi flagellin sequence by the polymerase chain reaction JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (bases 1 to 200) AUTHORS Picken,R.N. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1],[2] kindly submitted by R.N.Picken, 18-MAY-1990. Author address:R.N.Picken: Baxter Healthcare Corp., Pandex Division 909 Orchard Street Mundelein, IL 60060 FEATURES from to/span description pept 493 > 684 flagellin binding 480 486 ribosome binding site BASE COUNT 249 a 74 c 128 g 233 t ORIGIN 1 tctagatatt taagacttga tgagaaaaag tttgatgaat caattcgtaa taatattgat 61 aatgttagag agcttttttt atatgatctt aatggtgaca gagtgtatga taatggaatt 121 gctaaaatgc taggagattg tctgtcgcct cttgtggctt ccggaggagt tatttataat 181 aaaataaaga attacgactt gaaaattttt aatcaaaaaa ataaagttga agattataaa 241 aagaagtacg aagatagaga gagaaaagtg gaaggtgaac ttaatacctt ggattttacc 301 gttaagcgca tgaaagatca agaaaataca ttaaaggctt ttgattttaa tcaaagaaat 361 aaataataat aattattttt aatgctattg ctatttgcgt ttcttttttt ttaatttttg 421 tgctattctt tttaacaggc aaaaggattt gccaaagtca gaaatttaaa ttttatcatg 481 gaggaatgat atatgattat caatcataat acatcagcta ttaatgcttc aagaaataat 541 ggcattaacg ctgctaatct tagtaaaact caagaaaagc tttctagtgg gtacagaatt 601 aatcgagctt ctgatgatgc tgctggcatg ggagtttctg gtaagattaa tgctcaaata 661 agaggtttgt cacaagcttc taga // LOCUS BORGFLAGA 620 bp ds-DNA BCT 22-JUL-1990 DEFINITION B.burgdorferei DNA. ACCESSION M34711 KEYWORDS . SOURCE B.burgdorferei (strain B31; isolate ATCC #35210) DNA. ORGANISM Borrelia burgdorferei Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes; Spirochaetales; Spirochaetaceae. REFERENCE 1 (bases 1 to 620) AUTHORS Picken,R.N. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.N.Picken, 18-MAY-1990. Author address:R.N.Picken: Baxter Healthcare Corp., Pandex Division 909 Orchard Street Mundelein, IL 60060 BASE COUNT 220 a 113 c 125 g 162 t ORIGIN 1 tctagaaata cttcaaaggc tattaatttt attcagacaa cagaagggaa tttaaatgaa 61 gtagaaaaag tcttagtaag aatgaaggaa ttggcagttc aatcaggtaa cggcacatat 121 tcagatgcag acagaggttc tatacaaatt gaaatagagc aacttacaga cgaaattaat 181 agaattgctg atcaagctca atataaccaa atgcacatgt tatcaaacaa atctgcttct 241 caaaatgtaa gaacagctga agagcttgga atgcagcctg caaaaattaa cacaccagca 301 tcactttcag ggtctcaagc gtcttggact ttaagagttc atgttggagc aaaccaagat 361 gaacctattg ctgtaaatat ttatgcagct aatgttgcaa atcttttctc tggtgaggga 421 gctcaaactg ctcaggctgc accggttcaa gagggtgttc aacaggaagg agctcaacag 481 ccagcacctg ctacagcacc ttctcaaggc ggagttaatt ctcctgttaa tgttacaact 541 acagttgatg ctaatacatc acttgctaaa attgaaaatg ctattagaat gataagtgat 601 caaagggcaa atttaggtgc // LOCUS SSOBETA 2346 bp ds-DNA BCT 22-JUL-1990 DEFINITION S.solfataricus beta-D-galactosidase (lacS) gene, complete cds. ACCESSION M34696 KEYWORDS beta-D-galactosidase. SOURCE S.solfataricus (strain MT-4) DNA, clone C1. ORGANISM Sulfolobus solfataricus Prokaryota; Bacteria; Mendosicutes; Archaeobacteria; Sulfolobales. REFERENCE 1 (bases 1 to 2346) AUTHORS Cubellis,M.V., Rozzo,C., Montecucchi,P. and Rossi,M. TITLE Isolation and sequencing of a new beta-galactosidase archaebacterial gene JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.V.Cubellis, 18-MAY-1990. Author address:M.V.Cubellis Dipt. Chimica Organica e Biologica Universita di Napoli Via Mezzocannone, 16 80134 Napoli, Italia FEATURES from to/span description pept 229 1698 beta-D-galactosidase (lacS) (EC 3.2.1.23) BASE COUNT 770 a 402 c 487 g 687 t ORIGIN 1 aaggagaaac ttggcagttt ataacttgac agtaggttgt ggagtgatga ctggatcaat 61 actaggagga gtagcatata attacgttac acaattttat aacccaatat attcaataga 121 ccttatgctt atcctatcct ctattctaag attctcggta tctcccctat tcttgaccat 181 aaaagatact cgctcaaagc ttaaataata ttaatcataa ataaagtcat gtactcattt 241 ccaaatagct ttaggtttgg ttggtcccag gccggatttc aatcagaaat gggaacacca 301 gggtcagaag atccaaatac tgactggtat aaatgggttc atgatccaga aaacatggca 361 gcgggattag taagtggaga tctaccagaa aatgggccag gctactgggg aaactataag 421 acatttcacg ataatgcaca aaaaatggga ttaaaaatag ctagactaaa tgtggaatgg 481 tctaggatat ttcctaatcc attaccaagg ccacaaaact ttgatgaatc aaaacaagat 541 gtgacagagg ttgagataaa cgaaaacgag ttaaagagac ttgacgagta cgctaataaa 601 gacgcattaa accattacag ggaaatattc aaggatctta aaagtagagg actttacttt 661 atactaaaca tgtatcattg gccattacct ctatggttac acgacccaat aagagtaaga 721 agaggagatt ttactggacc aagtggttgg ctaagtacta gaacagttta cgaattcgct 781 agattctcag cttatatagc ttggaaattc gatgatctag tggatgagta ctcaacaatg 841 aatgaaccta acgttgttgg aggtttagga tacgttggtg ttaagtccgg ttttccccca 901 ggatacctaa gctttgaact ttcccgtagg catatgtata acatcattca agctcacgca 961 agagcgtatg atgggataaa gagtgtttct aaaaaaccag ttggaattat ttacgctaat 1021 agctcattcc agccgttaac ggataaagat atggaagcgg tagagatggc tgaaaatgat 1081 aatagatggt ggttctttga tgctataata agaggtgaga tcaccagagg aaacgagaag 1141 attgtaagag atgacctaaa gggtagattg gattggattg gagttaatta ttacactagg 1201 actgttgtga agaggactga aaagggatac gttagcttag gaggttacgg tcacggatgt 1261 gagaggaatt ctgtaagttt agcgggatta ccaaccagcg acttcggctg ggagttcttc 1321 ccagaaggtt tatatgacgt tttgacgaaa tactggaata gatatcatct ctatatgtac 1381 gttactgaaa atggtattgc ggatgatgcc gattatcaaa ggccctatta tttagtatct 1441 cacgtttatc aagttcatag agcaataaat agtggtgcag atgttagagg gtatttacat 1501 tggtctctag ctgataatta cgaatgggct tcaggattct ctatgaggtt tggtctgtta 1561 aaggtcgatt acaacactaa gagactatac tggagaccct cagcactagt atatagggaa 1621 atcgccacaa atggcgcaat aactgatgaa atagagcact taaatagcgt acctccagta 1681 aagccattaa ggcactaaac tttctcaagt ctcactatac caaatgagtt ttcttttaat 1741 cttattctaa tctcattttc attagattgc aatactttca taccttctat attatttatt 1801 ttgtaccttt tgggatctac acttaatgtt agcctaattg gaaagtcatt tagatttaat 1861 actgttacca gtccatccct tttaattatt aatgaaaata agaagggata agtagcgata 1921 gcccttattc cgatatggtc tccaacaata tcccttatta tctgccttgc aacactaggg 1981 tagaactctg aaatcagata tggtaggtaa gttgtaagtg ataggacgta aactttagag 2041 ttagagtaag tgttctgaaa gactactggg tgcaattcga caccgttata ggcgtaaagg 2101 attggcgtag ctccgtttaa tgaaaatata ggtcctacag ggaaattggc ttgcctcttg 2161 taatatgacc aatagaacgt tttcccatcc ctggttaacg cattgacact aacactatcg 2221 taaatcaagt taccgacacc aagaattttc agtgcagtat cccccaagac ttcaataagc 2281 tttttagctg cacttgctgt aaacattaag ttaactcccc tattaagtaa atccacaata 2341 tctaga //