Path: utzoo!attcan!uunet!shelby!bu.edu!mit-eddie!snorkelwacker!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: Date: 2 Aug 90 12:00:35 GMT Sender: root@genbank.BIO.NET Distribution: bionet Lines: 5141 Approved: lear@genbank.bio.net Checksum: 62884 293 LOCUS ECOALPHOA 171 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33724 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 171) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chang,C.N., Kuang,W.-J. and Chen,E.Y. TITLE Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli JOURNAL Gene 44, 121-125 (1986) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 141 phoA coding sequence /note="upstream sequence of psiA44:Mu dI" /evidence=EXPERIMENTAL [1],[2] site 141 142 Mu dI insertion site /evidence=EXPERIMENTAL /note="psiA44:Mu dI insertion site" [1] trns 142 > 171 Mu dI-R /evidence=EXPERIMENTAL [1] BASE COUNT 49 a 45 c 51 g 26 t ORIGIN 1 caaagctccg ggcctcaccc aggcgctaaa taccaaagat ggcgcagtga tggtgatgag 61 ttacgggaac tccgaagagg attcacaaga acataccggc agtcagttgc gtattgcggc 121 gtatggcccg catgccgcca atgaagcggc gcacgaaaaa cgcgaaagcg t // LOCUS ECOALPHOB 183 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33725 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 183) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chang,C.N., Kuang,W.-J. and Chen,E.Y. TITLE Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli JOURNAL Gene 44, 121-125 (1986) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 153 phoA coding sequence /note="upstream sequence of psiA10:Mu dI" /evidence=EXPERIMENTAL [1],[2] site 153 154 Mu dI insertion site /evidence=EXPERIMENTAL /note="psiA10::Mu dI insertion site" [1] trns 154 > 183 Mu dI-R /evidence=EXPERIMENTAL [1] BASE COUNT 55 a 39 c 39 g 50 t ORIGIN 1 ctgtcataaa gttgtcacgg ccgagactta tagtcgcttt gtttttattt tttaatgtat 61 ttgtacatgg agaaaataaa gtgaaacaaa gcactattgc actggcactc ttaccgttac 121 tgtttacccc tgtgacaaaa gcccggacac cagtgaagcg gcgcacgaaa aacgcgaaag 181 cgt // LOCUS ECOALPHOD 242 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33726 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 242) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chang,C.N., Kuang,W.-J. and Chen,E.Y. TITLE Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli JOURNAL Gene 44, 121-125 (1986) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 212 phoA coding sequence /note="upstream sequence of psiA40" /evidence=EXPERIMENTAL [1],[2] site 212 213 Mu dI insertion site /evidence=EXPERIMENTAL /note="psiA40:Mu dI insertion site" [1] trns 213 > 242 Mu dI-R /evidence=EXPERIMENTAL [1] BASE COUNT 59 a 61 c 64 g 58 t ORIGIN 1 attgcactgg cactcttacc gttactgttt acccctgtga caaaagcccg gacaccagaa 61 atgcctgttc tggaaaaccg ggctgctcag ggcgatatta ctgcacccgg cggtgctcgc 121 cgtttaacgg gtgatcagac tgccgctctg cgttattctc ttagcgataa acctgcaaaa 181 aatattattt tgctgattgg cgatgggatg ggtgaagcgg cgcacgaaaa acgcgaaagc 241 gt // LOCUS ECOALPHOE 97 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33727 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 97) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chang,C.N., Kuang,W.-J. and Chen,E.Y. TITLE Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli JOURNAL Gene 44, 121-125 (1986) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 67 phoA coding sequence /note="upstream sequence of psiA5::Mu dI. psiA30 upstream region is identical" /evidence=EXPERIMENTAL [1],[2] site 67 68 Mu dI insertion site /evidence=EXPERIMENTAL /note="psiA5:Mu dI insertion site; psiA30 upstream region is identical" [1] trns 68 > 97 Mu dI-R /evidence=EXPERIMENTAL [1] BASE COUNT 34 a 13 c 22 g 28 t ORIGIN 1 ttgtttttat tttttaatgt atttgtacat ggagaaaata aagtgaaaca aagcactatt 61 gcactggtga agcggcgcac gaaaaacgcg aaagcgt // LOCUS ECOALPHOF 82 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33728 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 82) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chen,C.-M., Ye,Q.-Z., Zhu,Z., Wanner,B.L. and Walsh,C.T. TITLE Molecular biology of carbon-phosphorus bond cleavage: Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B JOURNAL J. Biol. Chem. 265, 4461-4471 (1990) STANDARD full staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 52 phn operon sequence /note="upstream sequence of psiD33; psiD41 is identical" /evidence=EXPERIMENTAL [1],[2] site 52 53 Mu dI insertion site /evidence=EXPERIMENTAL /note="psiD33:Mu dI insertion site; psiD41 is identical" [1] trns 53 > 82 Mu dI-R /evidence=EXPERIMENTAL [1] BASE COUNT 28 a 19 c 22 g 13 t ORIGIN 1 attgaggaaa acgaatgaac gctaagataa ttgcctcgct ggccttcacc agtgaagcgg 61 cgcacgaaaa acgcgaaagc gt // LOCUS ECOALPHOG 94 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33729 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 94) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chang,C.N., Kuang,W.-J. and Chen,E.Y. TITLE Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli JOURNAL Gene 44, 121-125 (1986) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 64 phoA coding sequence /note="upstream sequence of psiA4" /evidence=EXPERIMENTAL [1],[2] site 65 65 Mu dI insertion site /evidence=EXPERIMENTAL /note="psiA4:Mu dI insertion site" [1] trns 65 > 94 Mu dI-R /evidence=EXPERIMENTAL [1] BASE COUNT 35 a 18 c 22 g 19 t ORIGIN 1 aatgtatttg tacatggaga aaataaagtg aaacaaagca ctattgcact ggcactctta 61 ccgttgaagc ggcgcacgaa aaacgcgaaa gcgt // LOCUS ECOALPHOH 233 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33730 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 233) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chen,C.-M., Ye,Q.-Z., Zhu,Z., Wanner,B.L. and Walsh,C.T. TITLE Molecular biology of carbon-phosphorus bond cleavage: Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B JOURNAL J. Biol. Chem. 265, 4461-4471 (1990) STANDARD full staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 203 phn operon sequence /note="upstream sequence of psiD31" /evidence=EXPERIMENTAL [1],[2] site 203 204 Mu dI insertion site /evidence=EXPERIMENTAL /note="Mu dI insertion site into phnD gene (psiD31::Mu dI)" [1] trns 204 > 233 Mu dI-R /evidence=EXPERIMENTAL [1] variant 201 201 g in E.coli; a in E.coli B variant 174 174 c in E.coli; g in E.coli B variant 141 141 g in E.coli; a in E.coli B variant 135 135 g in E.coli; a in E.coli B variant 76 76 t in E.coli; c in E.coli B variant 51 51 g in E.coli; a in E.coli B BASE COUNT 62 a 64 c 66 g 41 t ORIGIN 1 tcgctggcct tcaccagcat gttcagcctc agcaccctgt taagcccggc gcacgccgaa 61 gagcaggaaa aggcgttgaa tttcggcatt atttcaacgg aatcacagca aaacctgaaa 121 ccgcaatgga cgccgttctt gcaggatatg gagaagaagc tgggcgtgaa ggtcaacgcc 181 ttctttgccc cggactacgc gggtgaagcg gcgcacgaaa aacgcgaaag cgt // LOCUS ECOALPHOJ 88 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33732 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 88) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chang,C.N., Kuang,W.-J. and Chen,E.Y. TITLE Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli JOURNAL Gene 44, 121-125 (1986) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 58 phoA coding sequence /note="upstream sequence of psiA12; upstream sequence of psiA13::Mu dI is identical" /evidence=EXPERIMENTAL [1],[2] site 58 59 Mu dI insertion site /evidence=EXPERIMENTAL /note="psiA12:Mu dI insertion site; psiA13::Mu dI is identical" [1] trns 59 > 88 Mu dI-R /evidence=EXPERIMENTAL [1] BASE COUNT 33 a 13 c 21 g 21 t ORIGIN 1 ttttttaatg tatttgtaca tggagaaaat aaagtgaaac aaagcactat tgcactggtg 61 aagcggcgca cgaaaaacgc gaaagcgt // LOCUS ECOALPHOK 66 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33733 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 66) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Chang,C.N., Kuang,W.-J. and Chen,E.Y. TITLE Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli JOURNAL Gene 44, 121-125 (1986) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 36 psiF (orf-106) coding sequence /pseudo /evidence=EXPERIMENTAL [1],[2] trns 37 > 66 Mu dI-R BASE COUNT 26 a 17 c 15 g 8 t ORIGIN 1 cgcgaatgca ataatcaagc aacacaacaa tctctgtgaa gcggcgcacg aaaaacgcga 61 aagcgt // LOCUS ECOALPHOL 67 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33734 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 67) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 37 psiR43 coding sequence /pseudo trns 38 > 67 Mu dI-R BASE COUNT 23 a 18 c 17 g 9 t ORIGIN 1 ctctaattag gacaacagaa tcactcggta ccggacctga agcggcgcac gaaaaacgcg 61 aaagcgt // LOCUS ECOALPHOM 106 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33735 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 106) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Overduin,P., Boos,W. and Tommassen,J. TITLE Nucleotide sequence of the ugp genes of e. coli k-12: homology to the maltose system JOURNAL Mol. Microbiol. 2, 767-775 (1988) STANDARD simple staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 76 ugpB coding sequence /pseudo /evidence=EXPERIMENTAL [1],[2] trns 77 > 106 Mu dI-R BASE COUNT 41 a 26 c 22 g 17 t ORIGIN 1 gcccaacgtt ttaacgccga aaacccggat tacaaaattg taccgaccta taaaggcaac 61 tacgaacaga atttaatgaa gcggcgcacg aaaaacgcga aagcgt // LOCUS ECOALPHON 67 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33736 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 67) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 37 psiH6 coding sequence /pseudo [1] trns 38 > 67 Mu dI-R BASE COUNT 22 a 14 c 17 g 14 t ORIGIN 1 ggcatcatga ctatcgtaag tttgatctat cacatagtga agcggcgcac gaaaaacgcg 61 aaagcgt // LOCUS ECOALPHOO 82 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33737 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 82) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Oliver,G., Gosset,G., Sanchez-Pescador,R., Lozoya,E., Ku,L.M., Flores,N., Becerril,B., Valle,F. and Bolivar,F. TITLE Determination of the nucleotide sequence for the glutamate synthase structural genes of Escherichia coli K-12 JOURNAL Gene 60, 1-11 (1987) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 52 gltD coding sequence /pseudo /evidence=EXPERIMENTAL [1],[2] trns 53 > 82 Mu dI-R BASE COUNT 26 a 21 c 28 g 7 t ORIGIN 1 gaacatgccg ggttcccgcc gcgaagtgaa aaacgcccgg gaagaaggcg tatgaagcgg 61 cgcacgaaaa acgcgaaagc gt // LOCUS ECOALPHOP 116 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33738 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 116) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 86 psiK20 coding sequence /pseudo [1] trns 87 > 116 Mu dI-R BASE COUNT 31 a 26 c 34 g 25 t ORIGIN 1 gcgactcaga gagatcagca agtcagcact accgaccgtg ggcagttttc aaaaggtcat 61 cggtagtagt ttttgcgttc tgcgtttgaa gcggcgcacg aaaaacgcga aagcgt // LOCUS ECOALPHOQ 70 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33739 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 70) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Cole,S.T., Eiglmeier,K., Ahmed,S., Honore,N., Elmes,L., Anderson,W.F. and Weiner,J.H. TITLE Nucleotide sequence and gene-polypeptide relationships of the glpABC operon encoding the anaerobic sn-glycerol-3-phosphate dehydrogenase of Escherichia coli K-12 JOURNAL J. Bacteriol. 170, 2448-2456 (1988) STANDARD simple staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 40 glpB coding sequence /pseudo [1],[2] trns 41 > 70 Mu dI-R BASE COUNT 19 a 20 c 21 g 10 t ORIGIN 1 acaacgcgtg ctcgatctcg cttgccaggc gcaggcatta tgaagcggcg cacgaaaaac 61 gcgaaagcgt // LOCUS ECOALPHOR 78 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33740 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 78) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Oliver,G., Gosset,G., Sanchez-Pescador,R., Lozoya,E., Ku,L.M., Flores,N., Becerril,B., Valle,F. and Bolivar,F. TITLE Determination of the nucleotide sequence for the glutamate synthase structural genes of Escherichia coli K-12 JOURNAL Gene 60, 1-11 (1987) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 48 gltB coding sequence /pseudo /evidence=EXPERIMENTAL [1],[2] trns 49 > 78 Mu dI-R BASE COUNT 20 a 21 c 24 g 13 t ORIGIN 1 cgaactgatg gttatcgaca cccgcagtgg gcgtattctg cactcggctg aagcggcgca 61 cgaaaaacgc gaaagcgt // LOCUS ECOALPHOS 87 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33741 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 87) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 57 paiJ22 coding sequence /pseudo [1] trns 58 > 87 Mu dI-R BASE COUNT 28 a 20 c 22 g 17 t ORIGIN 1 agactatgag acggaatgaa gaactgttca tcacattctt tattccgagc cgctacgtga 61 agcggcgcac gaaaaacgcg aaagcgt // LOCUS ECOALPHOT 81 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33742 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 81) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Davis,E.O. and Henderson,P.J.F. TITLE The cloning and DNA sequence of the gene xylE for xylose-proton symport in Escherichia coli K12 JOURNAL J. Biol. Chem. 262, 13928-13932 (1987) STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 51 psiE coding sequence /pseudo [1],[2] trns 52 > 81 Mu dI-R BASE COUNT 25 a 19 c 24 g 13 t ORIGIN 1 gtgcatctgg ctgatgtgct gttcgcgcca gaacaaacca gcaaatatga gtgaagcggc 61 gcacgaaaaa cgcgaaagcg t // LOCUS ECOALPHOU 69 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33743 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 69) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Oliver,G., Gosset,G., Sanchez-Pescador,R., Lozoya,E., Ku,L.M., Flores,N., Becerril,B., Valle,F. and Bolivar,F. TITLE Determination of the nucleotide sequence for the glutamate synthase structural genes of Escherichia coli K-12 JOURNAL Gene 60, 1-11 (1987) STANDARD simple staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 39 gltB coding sequence /evidence=EXPERIMENTAL [1],[2] trns 40 > 69 Mu dI-R [1] BASE COUNT 19 a 15 c 21 g 14 t ORIGIN 1 ctttgacttt aactccatgc atatggagcc gtgggatggt gaagcggcgc acgaaaaacg 61 cgaaagcgt // LOCUS ECOALPHOV 94 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33744 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 94) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 64 psiH16 coding sequence /pseudo [1] trns 65 > 94 Mu dI-R [1] BASE COUNT 19 a 26 c 29 g 20 t ORIGIN 1 ccatcttagc agcgtctggt ccgggtcggc ttaggggctt cctttatgca gtactgcctg 61 ccgatgaagc ggcgcacgaa aaacgcgaaa gcgt // LOCUS ECOALPHOW 59 bp ds-DNA BCT 02-AUG-1990 DEFINITION Escherichia coli Mu dI insertion site. ACCESSION M33745 KEYWORDS alkaline phosphatase. SOURCE E.coli K12 DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 59) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by P.M.Steed 13-APR-1990. FEATURES from to/span description site 1 29 psiJ49 coding sequence /pseudo [1] trns 30 > 59 Mu dI-R [1] BASE COUNT 15 a 13 c 18 g 13 t ORIGIN 1 ccgattgcgg ctgtttatgg gtatctatct gaagcggcgc acgaaaaacg cgaaagcgt // LOCUS SYNFUSAAA 240 bp ds-DNA SYN 02-AUG-1990 DEFINITION Bacteriophage Mu fusion gene of the trp operon. ACCESSION M33723 KEYWORDS . SOURCE Bacteriophage Mu and E.coli lacZ DNA. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 240) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Allet,B. TITLE Mu insertion duplicates a five base pair sequence at the host inserted site JOURNAL Cell 16, 123-129 (1979) STANDARD simple staff_entry REFERENCE 3 (sites) AUTHORS Yanofsky,C., Platt,T., Crawford,I.P., Nichols,B.P., Christie,G.E., Horowitz,H., van Cleemput,M. and Wu,A.M. TITLE The complete nucleotide sequence of the tryptophan operon of Escherichia coli JOURNAL Nucleic Acids Res. 9, 6647-6668 (1981) STANDARD full staff_entry COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description signal 1 104 stem_loop, Mu dI-R [1] site 105 240 trp operon (partial) /note="trp operon sequence present in Mu dI is derived from the trpA-lacZ W209 protein fusion and contains last base of trpC, all of trpB and 187 bases of trpA" [1],[3] site 1 48 MuR derived sequence [1],[2] site 104 43 (c) MuR derived sequence [1],[2] BASE COUNT 67 a 54 c 57 g 62 t ORIGIN 1 tgaagcggcg cacgaaaaac gcgaaagcgt ttcacgataa atgcgaaacg taaagttttc 61 gcatttatcg tgaaacgctt tcgcgttttt cgtgcgccgc ttcattaagg aaaggaacaa 121 tgacaacatt acttaacccc tattttggtg agtttggcgg catgtacgtg ccacaaatcc 181 tgatgcctgc tctgcgccag ctggaagaag cttttgtcag tgcgcaaaaa gatcctgaat // LOCUS SYNFUSAAB 53 bp ds-DNA SYN 02-AUG-1990 DEFINITION Bacteriophage Mu fusion gene of the trp operon. ACCESSION M33731 KEYWORDS . SOURCE Bacteriophage Mu and E.coli lacZ DNA. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 53) AUTHORS Metcalf,W.W., Steed,P.M. and Wanner,B.L. TITLE Identification of phosphate-starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu dI) transcriptional fusions JOURNAL J. Bacteriol. (1990) In press STANDARD full staff_entry REFERENCE 2 (sites) AUTHORS Yanofsky,C., Platt,T., Crawford,I.P., Nichols,B.P., Christie,G.E., Horowitz,H., van Cleemput,M. and Wu,A.M. TITLE The complete nucleotide sequence of the tryptophan operon of Escherichia coli JOURNAL Nucleic Acids Res. 9, 6647-6668 (1981) STANDARD full staff_entry REFERENCE 3 (sites) AUTHORS Kalnins,A., Otto,K., Ruether,U. and Mueller-Hill,B. TITLE Sequence of the lacZ gene of Escherichia coli JOURNAL EMBO J. 2, 593-597 (1983) STANDARD full staff_review COMMENT Authorin copy of sequence for [1] kindly submitted by W.W.Metcalf 13-APR-1990. FEATURES from to/span description site 1 9 lacZ coding sequence /note="lacZ sequence begins with third codon of LacZ protein" [1],[3] site 53 10 (c) trpA coding sequence BASE COUNT 13 a 14 c 17 g 9 t ORIGIN 1 atccgtaatc gccagtgggt cggagaaggg gatacctaac tccagcgcgt cag // LOCUS ATH60CPNA 735 bp ss-mRNA PLN 02-AUG-1990 DEFINITION A.thaliana plastid 60-kDa chaperonin-60 alpha polypeptide (cpn-60 alpha) mRNA, partial cds. ACCESSION M35597 KEYWORDS chaperonin-60. SOURCE A.thaliana (cv. Columbia), cDNA to mRNA, clone pTZ19R. ORGANISM Arabidopsis thaliana Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Dilleniidae; Capparales; Brassicaceae. REFERENCE 1 (bases 1 to 735) AUTHORS Martel,R., Cloney,L.P., Pelcher,L.E. and Hemmingsen,S.M. TITLE Unique composition of plastid chaperonin-60: Alpha and beta polypeptide-encoding genes are highly divergent JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.M.Hemmingsen, 26-JUN-1990. FEATURES from to/span description pept < 1 > 735 60-kDa chaperonin-60 alpha-polypeptide (AA at 1) BASE COUNT 187 a 139 c 196 g 213 t ORIGIN 1 aagcttgctg attgtgttgg tctcactctt ggccctagag ggaggaatgt tgtgttggat 61 gaatttggaa gtcctaaggt tgtgaatgat ggagtcacca ttgctagagc tattgagtta 121 cctaatgcca tggaaaatgc tggtgcagcg cttattcgtg aggttgcgag taagactaat 181 gactctgctg gtgatgggac aaccactgcg tctatccttg ctcgggagat aatcaaacat 241 ggattgttga gcgtcacttc tggtgcgaat cccgtttcac tcaagagggg aattgataag 301 actgttcaag gtctgatcga agagcttcag aagaaagcta ggcccgtgaa aggtcgtgta 361 gactacagag ctgtggcttc tatctctgct ggaaatgatg accttatagg gtcaatgatt 421 gctgatgcca tcgacaaagt tggacctgat ggtgttttgt ccattgaatc ttcatcttct 481 tttgagacca cggtcgaagt tgaagaaggg atggagattg acagaggtta catctcgcct 541 cagtttgtta caaaccctga gaaactacta gctgagtttg agaatgctag ggtattgatc 601 actgatcaga agatcactgc gatcaaagac atcatcccta ttttggagaa gaccactcag 661 cttcgtgctc cgttgttgat tattgcagag gatgttactg gtgaagcctt agctaccctt 721 gtcgtgaaca agctt // LOCUS ATH60CPNB 559 bp ss-mRNA PLN 02-AUG-1990 DEFINITION A.thaliana plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds. ACCESSION M35598 KEYWORDS chaperonin-60. SOURCE A.thaliana (cv. Columbia), cDNA to mRNA, clone ptz19R. ORGANISM Arabidopsis thaliana Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Dilleniidae; Capparales; Brassicaceae. REFERENCE 1 (bases 1 to 559) AUTHORS Martel,R., Cloney,L.P., Pelcher,L.E. and Hemmingsen,S.M. TITLE Unique composition of plastid chaperonin-60: Alpha and beta polypeptide-encoding genes are highly divergent JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.M.Hemmingsen, 26-JUN-1990. FEATURES from to/span description pept < 1 > 559 60-kDa chaperonin-60 beta-polypeptide (AA at 1) BASE COUNT 166 a 96 c 155 g 142 t ORIGIN 1 aagcttgtga ggcaagcggc tgccaaaacc aatgacttgg ctggtgacgg tacaacaaca 61 tctgttgttc ttgcacaagg ttttatcgct gagggtgtca aggtggtagc tgctggtgca 121 aaccctgttt tgatcaccag aggtattgag aagacagcaa aggctttggt taccgagctc 181 aagaaaatgt ctaaggaggt tgaagacagt gaacttgcag atgttgcagc tgttagtgcg 241 ggtaacaacg acgaaattgg aaatatgatt gctgaagcaa tgagcaaagt gggcaggaaa 301 ggtgtggtga cccttgagga gggtaaaagt gccgagaaca accttcacgt cgtagaagga 361 atgcaatttg accgtggtta tatctctcct tactttgtga cagacagcga gaaaatgtcc 421 gtcgagttcg acaattgcaa gttacttctc gttgacaaga aaattaccaa tgcaagggat 481 cttgttggtg ttttggagga tgcaattaga ggcggatacc caatattaat tattgctgaa 541 gacattgaac aagaagctt // LOCUS BNA60CPNA 1783 bp ss-mRNA PLN 02-AUG-1990 DEFINITION B.napus plastid 60-kDa chaperonin-60 alpha-polypeptide (cpn-60 alpha) mRNA, partial cds. ACCESSION M35599 KEYWORDS chaperonin-60 alpha-polypeptide. SOURCE B.napus (cv. Westar) plastid chaperonin-60, cDNA to mRNA. ORGANISM Brassica napus Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Dilleniidae; Capparales; Brassicaceae. REFERENCE 1 (bases 1 to 1783) AUTHORS Martel,R., Cloney,L.P., Pelcher,L.E. and Hemmingsen,S.M. TITLE Unique composition of plastid chaperonin-60: Alpha and beta polypeptide-encoding genes are highly divergent JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.M.Hemmingsen, 26-JUN-1990. FEATURES from to/span description pept < 1 1638 60-kDa chaperonin-60 alpha-polypeptide precursor (AA at 1) sigp < 1 21 60-kDa chaperonin-60 alpha-polypeptide signal peptide matp < 1 1635 60-kDa chaperonin-60 alpha-polypeptide BASE COUNT 460 a 395 c 486 g 442 t ORIGIN 1 cgccgtttca gcgttagagc taatgtaaaa gagatctctt tcgaccagag ctcaagagct 61 gctcttcaag ctggtattga caagcttgct gatgccgttg gtcttaccct tggccctaga 121 ggaagaaatg ttgtgttgga tgagtttgga agtcccaagg tcgtgaatga tggagtcacc 181 attgctaggg ccattgagtt acctgacgct atggagaatg ctggtgcagc acttatccgt 241 gaggttgcta gtaagactaa tgactcagct ggtgacggca caaccactgc ctccgtcctt 301 gctcgggaga taatcaaaca cggcttacta agcgtcactt ccggtgccaa tccagtctca 361 ctcaagagag gaatcgataa gaccgttcaa gctttgatcg aagagctcga gaagagggct 421 agacctgtca aaggcggtag tgacatcaaa gccgtggcta caatctctgc tggaaatgat 481 gagcttgtgg gaacaatgat tgctgatgcc attgataaag ttggacctga tggtgttttg 541 tccattgaat cttcttcctc ctttgagact accgtcgaag ttgaagaagg aatggagatt 601 gatagaggtt acatctcacc acagtttgtt acaaaccctg agaagctcct agtcgagttc 661 gagaacgcgc gcgtgctgat caccgatcag aagatcactg cgatcaaaga catcatcccg 721 atcctggaga aaaccactca gctccgagct ccgttgctca tcatcgcgga ggatgtcacc 781 ggcgaggccc tggcgaccct cgtcgtgaac aaactccgcg gcgtgctcaa cgtggtcgcc 841 gtcaaggctc cagggtttgg tgaaagaaga aaagctatgc ttcaggacat tgccatcttg 901 acggggccga gtacgaccct cgacatgggc cttctggtgg agaacacgac catagatcag 961 ttggggatcg ctaggaaagt cactattagc aaagactcga ccacgcttat agctgatgcg 1021 gcttccaagg agaccctgca agctcgtatc tcccagctta agaaggagct gtcagagact 1081 gactccgtgt acgactcgga gaagctcgcc gagagaatgc ccaagctgcc aggcggtgtt 1141 gccgttatta aagtcggagc ggcgactgag actgagctcg aggaccgtaa gcttcgtatc 1201 gaggacgcga agaacgctac atttgctgca atcgaagaag ggatagttcc tggcggcggt 1261 gccacgctgg tgcatctatc aactgtgatt cctgctatta aggagaagct tgaggatgct 1321 gatgagcgtt tgggagccga catagtacag aaggctttgg tggcaaggtc gcttattgca 1381 cagaacgctg gaataggagg agaagttgtt gtggagaaga ttatgttcag cgaatgggag 1441 atagggtaca acgccatgac tgatacatat gagaatctgt tggaagctgg agtgattgat 1501 ccagctaaag tgacgagatg tgcgcttcag aacgctgctt cggttgcggg gatggtgctg 1561 accactcagg ccattgttgt cgacaaaccg aaacctaagg ctcctactgc tgctcctcct 1621 cagggtctca tggtgtaatg aaatcactta tcatatggct atatttgttg tccccaatta 1681 tatctgcaat atttttctct ggggaaatga gtagtttgtt taacggtaat gagaatatca 1741 tctttttgat ttatgatttg caaaataaaa gtttatattc aat // LOCUS BNA60CPNB 1982 bp ss-mRNA PLN 02-AUG-1990 DEFINITION B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds. ACCESSION M35600 KEYWORDS chaperonin-60 beta-polypeptide. SOURCE B.napus (cv. Westar) plastid chaperonin-60, cDNA to mRNA. ORGANISM Brassica napus Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Dilleniidae; Capparales; Brassicaceae. REFERENCE 1 (bases 1 to 1982) AUTHORS Martel,R., Cloney,L.P., Pelcher,L.E. and Hemmingsen,S.M. TITLE Unique composition of plastid chaperonin-60: Alpha and beta polypeptide-encoding genes are highly divergent JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.M.Hemmingsen, 26-JUN-1990. FEATURES from to/span description pept 64 1830 60-kDa beta-polypeptide of plastid chaperonin-60 precursor sigp 64 228 60-kDa beta-polypeptide of plastid chaperonin-60 signal peptide matp 229 1827 60-kDa beta-polypeptide of plastid chaperonin-60 BASE COUNT 564 a 372 c 547 g 499 t ORIGIN 1 cctgctcccc agtttcttat ccgtggtgct tctccgcctc ttcgcttcac ttctcttgaa 61 aagatggcat caaccttcac tgcaacgtct tccattggct ccatggttgc tccaaatgcc 121 cacaaaacgg ataagaagct tatgaacaag ttgtcttcaa gctctttcgg gaggaggcag 181 aacgtgttcc ccaagctcag aagatccagt cctgcagttg tatgtgcagc caaggagttg 241 catttcaaca aagacgggac taccatcagg aagcttcaag ctggtgtcaa caagcttgca 301 gacctagttg gtgtgacact tggacctaaa gggcgaaacg ttgttcttga gagcaagtat 361 ggatcaccaa gaattgtcaa tgatggtgtg actgttgcaa gggaggttga attggaagac 421 cctgttgaga acattggtgc caaacttgtt aggcaagcag ctgccaagac caatgatctg 481 gccggtgatg gtaccacaac atctgtggtt cttgcacaag gttttattgc tgagggtgtc 541 aaggtggtgg ctgctggtgc aaaccctgta ttgatcacta gaggcattga gaagacagca 601 aaggctttgg tagccgagct caagaaaatg tctaaggagg ttgaagacag tgagcttgca 661 gatgtggcag ccgttagtgc cggtaacaat gcagaaattg gaagcatgat tgctgaagca 721 atgagcagag tgggcaggaa gggtgtggtg acacttgagg agggtaaaag tgcagagaac 781 gctctctacg tggtggaagg aatgcaattt gatcgaggtt atgtctcccc ttactttgtg 841 acagacagcg agaaaatgtc agttgagttc gacaattgca agttgcttct tgttgacaag 901 aaaattacca atgcaaggga tcttgttggt gttctggagg atgcaattag aggaggatac 961 ccaattttaa taattgcgga agacattgag caggaggctt tagcgaccct tgttgttaac 1021 aagcttagag gcacactgaa gattgcagct ctcaaagctc caggatttgg agagcgcaag 1081 agccaatacc ttgatgatat tgccatcctc actggagcga ctgtgattcg tgaggaagtt 1141 ggtctttcac ttgacaaagc tggaaaagag gttcttggac atgcagcaaa agttgtcctc 1201 actaaggaga cttcgaccat tgtgggtgat gggagcacac aggacgcagt gcaaaagcgt 1261 gttacacaaa ttaagaacct tattgagcaa gcagagcaag actatgagaa ggaaaaactg 1321 aatgagagaa ttgcaaagct ctctggtgga gttgctgtga ttcaggtcgg agcacaaact 1381 gagacagaac tcaaagagaa gaaactgaga gttgaagatg ctcttaatgc tacaaaggct 1441 gctgttgagg aaggaattgt cgttggtggt ggttgtactc tgcttcgcct tgcttccaag 1501 gtggatgcca ttaaagccgc ccttgacaat gatgaagaaa aggttggagc cgacatcgtg 1561 aaaagagcac tgagttaccc tctgaaactg attgccaaga atgcaggagt caatggaagc 1621 gtagttagcg agaaggtgct ttctaacgat aatgtgaagt tcggttacaa tgctgcaacc 1681 ggcaagtacg aggatctaat ggctgcagga atcatcgatc caactaaggt tgtgagatgt 1741 tgcttggaac atgcagcttc ggttgcaaag acattcttga tgtctgactg tgtggttgtt 1801 gagatcaagg agcctgagcc agttccgtag gcaaccaatg gacaactcag gttatggata 1861 ctgaggagat gggggaatga agtaactctg tcggaaattg attcctttta gcttttgtaa 1921 tagatgagca agttgtaatg atttcgaaca aaagaatgtg ctgtgtactg aaattttgaa 1981 cc // LOCUS HS4RAJI 11835 bp ds-DNA VRL 02-AUG-1990 DEFINITION Epstein-Barr virus B95-8 deletion region. ACCESSION M35547 KEYWORDS . SOURCE Epstein-Barr virus (strain Raji) DNA. ORGANISM Epstein-Barr virus Viridae; ds-DNA enveloped viruses; Herpesviridae; Gammaherpesviridae. REFERENCE 1 (bases 1 to 11835) AUTHORS Parker,B.D., Bankier,A., Satchwell,S., Barrell,B. and Farrell,P.J. TITLE Sequence and transcription of Raji Epstein-Barr virus DNA spanning the B95-8 deletion region JOURNAL Virology (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by P.J.Farrell, 25-JUN-1990. FEATURES from to/span description pept 3625 851 (c) LF3 gene product pept 10605 9316 (c) LF2 gene product pept > 11835 10566 (c) LF1 gene product (AA at 11834) orgrpl 3554 4609 origin of replication BASE COUNT 1948 a 3315 c 3869 g 2703 t ORIGIN 1 ggccgctgtt cacctaaagt gacgcaaggt ctgtcagccg ccagggtccg tttaccaggc 61 tttcaggtgt ggaatttaga tagagtgggt gtgtgctctt gtttaattac accaagatca 121 ccaccctcta tccatatccc acaattgata aacctccgca tgtccaacca ccacgttgaa 181 caggatgtgg caccctaaga ggacgcaggc atacaaggtt attacccagt ccttgtatgc 241 ctggtgtccc cttagtggga cgcaggccta ggtagcatca tttacactaa aagcagtgac 301 cttgttggta ctttaaggtt ggtccaatcc ataggctttt tttgtgaaaa cccggggatc 361 ggactagcct tagagtaact caaggccaag catttcacac ctgcaaatgc accatgtaac 421 cacagatcta aactgaaagt tgcagcttta gatggcaagg aaacttgggt ttcaggcata 481 gaaagcctgg ctcactatag cagcccatgt ttgttccagg gtgggggaaa ggcacgtgcc 541 cttagaaaac ttagctgcaa aaattctatt gtgttgggag agcctctata tctaaaggcc 601 tttcctcaca atacaaatgt tactaacgtc tgccctctgg agacctgcta tgtggctaga 661 cgtatggcct acccaagacg ttgggggtct cgggtaggcc atgattcttc caggcatagg 721 ttacaaccag tcactgctat caagcctact cagttcccaa cgcagcacat accccccgcc 781 tctcctgcca tgaggactta tggcagtgtt tactgttctg cttttactct tggaccaggc 841 tgtcattcta tcagaataac aggggaagca aggccccctg cttcagcggg acacgtgttt 901 ctagaatctc ggagccaata actacctgcc cctctaatct gtatgctgca tgaaaaacca 961 catacacgtg atgtaagttt agccagttta ttgttacacc aatgccccga aagtctcccc 1021 ctgtcccttt gggtctcagg acccagccct ggagctcggg ggcggccggg tggcccaccg 1081 ggtccgctgg gtccgctgcc ccgctccggc ggggggtggc cggctgcagc cgggtccggg 1141 gttccggccc tggagctcgg ggggcggccg ggtggcccac cgggtccgct gggtccgctg 1201 ccccgctccg gcggggggtg gccggctgca gccgggtccg gggttccggc cctggagctc 1261 ggggggcggc cgggtggccc accgggtccg ctgggtccgc tgccccgctc cggcgggggg 1321 tggccggctg cagccgggtc cggggttccg gccctggagc tcggggggcg gccgggtggc 1381 ccaccgggtc cgctgggtcc gctgccccgc tccggcgggg ggtggccggc tgcagccggg 1441 tccggggttc cggccctgga gctcgggggg cggccgggtg gcccaccggg tccgctgggt 1501 ccgctgcccc gctccggcgg ggggtggccg gctgcagccg ggtccggggt tccggccctg 1561 gagctcgggg ggcggccggg tggcccaccg ggtccgctgg gtccgctgcc ccgctccggc 1621 ggggggtggc cggctgcagc cgggtccggg gttccggccc tggagctcgg ggggcggccg 1681 ggtggcccac cgggtccgct gggtccgctg ccccgctccg gcggggggtg gccggctgca 1741 gccgggtccg gggttccggc cctggagctc ggggggcggc cgggtggccc accgggtccg 1801 ctgggtccgc tgccccgctc cggcgggggg tggccggctg cagccgggtc cggggttccg 1861 gccctggagc tcggggggcg gccgggtggc ccaccgggtc cgctgggtcc gctgccccgc 1921 tccggcgggg ggtggccggc tgcagccggg tccggggttc cggccctgga gctcgggggg 1981 cggccgggtg gcccaccggg tccgctgggt ccgctgcccc gctccggcgg ggggtggccg 2041 gctgcagccg ggtccggggt tccggccctg gagctcgggg ggcggccggg tggcccaccg 2101 ggtccgctgg gtccgctgcc ccgctccggc ggggggtggc cggctgcagc cgggtccggg 2161 gttccggccc tggagctcgg ggggcggccg ggtggcccac cgggtccgct gggtccgctg 2221 ccccgctccg gcggggggtg gccggctgca gccgggtccg gggttccggc cctggagctc 2281 ggggggcggc cgggtggccc accgggtccg ctgggtccgc tgccccgctc cggcgggggg 2341 tggccggctg cagccgggtc cggggttccg gccctggagc tcggggggcg gccgggtggc 2401 ccaccgggtc cgctgggtcc gctgccccgc tccggcgggg ggtggccggc tgcagccggg 2461 tccggggttc cggccctgga gctcgggggg cggccgggtg gcccaccggg tccgctgggt 2521 ccgctgcccc gctccggcgg ggggtggccg gctgcagccg ggtccggggt tccggccctg 2581 gagctcgggg ggcggccggg tggcccaccg ggtccgctgg gtccgctgcc ccgctccggc 2641 ggggggtggc cggctgcagc cgggtccggg gttccggccc tggagctcgg ggggcggccg 2701 ggtggcccac cgggtccgct gggtccgctg ccccgctccg gcggggggtg gccggctgca 2761 gccgggtccg gggttccggc cctggagctc ggggggcggc cgggtggccc accgggtccg 2821 ctgggtccgc tgccccgctc cggcgggggg tggccggctg cagccgggtc cggggttccg 2881 gccctggagc tcggggggcg gccgggtggc ccaccgggtc cgctgggtcc gctgccccgc 2941 tccggcgggg ggtggccggc tgcagccggg tccggggttc cggccctgga gctcgggggg 3001 cggccgggtg gcccaccggg tccgctgggt ccgctgcccc gctccggcgg ggggtggccg 3061 gctgcagccg ggtccggggt tccggccctg gagctcgggg ggcggccggg tggcccaccg 3121 ggtccgctgg gtccgctgcc ccgctccggc ggggggtggc cggctgcagc cgggtccggg 3181 gttccggccc tggagctcgg ggggcggccg ggtggcccac cgggtccgct gggtccgctg 3241 ccccgctccg gcggggggtg gccggctgca gccgggtccg gggttccggc cctggagctc 3301 ggggggcggc cgggtggccc accgggtccg ctgggtccgc tgccccgctc cggcgggggg 3361 tggccggctg cagccgggtc cggggttccg gccctggagc tcggggggcg gccgggtggc 3421 ccaccgggtc cgctgggtcc gctgccccgc tccggcgggg ggtggccggc tgcagccggg 3481 tccggggttc cggccctgga gctcgggggg cggccgggtg gcccaccggg tccgctgggt 3541 ccgctgcccc gctccggcgg ggatgggggt gcgctcccag gccggaccct ggtgccaggc 3601 agggaccccg cgccacccgc ttcatggggg gggaggccgc cgcaaggacg ccgggccggc 3661 tgggaggtgt gcaccccccg agcgtctgga cgacgctggc gagccgggcc agctcgcctt 3721 cttttatcct ctttttgggg tctctgtgca ataccttaag gtttgctcag gagtgggggg 3781 cttctcattg gttaattcag gtgtgtgatt ttagcccgtt gggttacatt aaggtgtgta 3841 accaggtggg tggtacctgg aggtcattct attgggataa cgagaggagg aggggctaga 3901 ggcccgcgag atttggggta ggcggagcct caggagggtc ccctccatag ggttgaacca 3961 ggagggggag gatcgggctc cgccccgata tacctagtgg gtggagccta gaggtaggta 4021 tccatagggt tccattatcc tggaggtatc ctaagctccg cccctatata ccaggtgggt 4081 ggagctaggt aggattcagc taggttccta ctggggtacc cccctaccct accttaaggt 4141 gcgccaccct tcctccttcc gttttaatgg tagaataacc tataggttat taacctagtg 4201 gtggaatagg gtattgcagc tgggtatata cctataggta tatagaacct agaggaaggg 4261 aaccctatag tgtaatccct ccccccccta cccccccctc ccttacggtt gcctgagccc 4321 atcccccacc ccagcacccc ggggtgacgt ggcaccccgc gtgccttact gacttgtcac 4381 ctttgcacat ttggtcagct gaccgatgct cgccacttcc tgggtcatga cctggcctgt 4441 gccttgtccc atggacaatg tccctccagc gtggtggctg cctttgggat gcatcacttt 4501 gagccactaa gcccccgttg ctcgccttgc ctgcctcacc atgacacact aagcccctgc 4561 taatccatga gccccgcctt taggaagcac cacgtcccgg ggacggaagc tggattttgg 4621 ccagtcttca attttgggga gtggttttgt gtgagccgga agttggcaat ggggtgaggg 4681 tggcgctggt taagctgacg acctcccaag gtctctcacc ctgggtacac aggtggggcg 4741 gcagcctcta actttggctg tggcctctat ttcctccctt tcctagccag ggccatgtgt 4801 tcctgcatgt ctacttgcct cctgtggtgg cagagcttgg ccctgggccc aacccccgcc 4861 ttgggagcct gtaggggcca acacccttgg tttgtttgtg ttcctgtttg ctggcaactt 4921 actggcagcc gagcagattc taatgggcgc ccgccttctt tctctcttgt tttattaata 4981 gaatctcagc caggacctat acctgagact tcaaagtctg gtcctgggtt ctgagacccc 5041 caagatttgt catgcacacc tgcacacctg ttggtattgg gtttctattc ttgagtgtga 5101 aagtttgtaa aaaaattcat aaaatgtcac taattcctct tacctgttta gggtattgtg 5161 caattcttca gcctgcctat tttcaatttg cctaaggtgg caatttaaga tgtggttaat 5221 taaccatttt cctgtctgac accactgcat gggcaaccgg gttccatggc acatttagag 5281 ataaacatag atgtcttgtc ttgctcatgt gcagaggagg gggtgttggt gtgcaatata 5341 gtttctggat tccaaattga gttgggggtg ctattttcac tatggaatta aattactgac 5401 attagacagt ggacaccggg ctatatgtgg ggatgtctgt ggcttgtcat ttcctcttag 5461 aaggtaatcc cccatcttaa cttcccttta aattgtgatg caagccctgg gttatttata 5521 gaatgattat ctaggtttga tagtctgaag gctgggcaga gaatgtttgt aatttttatt 5581 caccttcttt accccccacg agtatccagt tctagaagat ctcctgatat cccgggctgc 5641 cattattccc ttgagtgtta tagcttcctc ttaacttaag caagagctcc aggatgttag 5701 cttttttggt ggggctggtt gtcaggaaga ggttccagtg ttgtccttta tttttagatg 5761 ttagctttgt gttaggttag tatgggctgg gtattcacta gtgaaggcaa ctaacacagt 5821 tagacgtgct agttgtgccc actggtgttt atccggtccc aaatgtcacc acagaacaca 5881 gggggctgga tttggcagca gcacttgtgc ttttgttgat ttttacccgt gtatcagagt 5941 gggggatgct agccaattta gcttcccctc cccttaacag ggggtctcgc ggggtgccaa 6001 ttgtcgcctg ccttcccccg cttccccttg ttaacttata gcatgatagg taggtcacct 6061 aacgtggaag cctggtgggt gatccttcct cggtagggag cgcttagggc tgttgagctc 6121 aacagcccca cctgggtaaa atgtatgttc taaagagtta cccaattata acaaaactgt 6181 tgtagggtaa cgaagacctg atggaagtgg tattgttgcc gttgaaagac gggtgtcctg 6241 gctcaagttc gcacttccta tacagtgtta aagccttgta tcggaagttt gggcttcgtc 6301 ccagtgtact cgataatgtc gactgctgcg aaaggtttgg accgtcttcc agtaggtgtt 6361 gggggtccca aatcacgagg ttaggcaggt gcacttggct ctttaggagg gacccttaag 6421 ccagacaatg tagtgcccct tttttttgca aattggcctt attattaatt tcttgttaac 6481 actaattctg ttctatgacc ctgtgttttt cagatgccgt tgaacgtgtc actgagctga 6541 atttggacgc agctacttga cctttgcccc cgtgcctcca gcgctgataa gtgctgcgtc 6601 cactttgtgt tacaggtggg ccaaacctcc agaatatcaa ttggtggggc cttggtgggc 6661 tgcataaggc agtaggtttg aggtgaccta cttggaccat gtggatccag tgtcctgatc 6721 ctggaccttg actatgaaac aattctaaaa aaatgcatca tagtccagtg tccagggaca 6781 gtgcactcgg aagtctcatc atctccgttt gtgtgtttag tgtggccagt acggccaccc 6841 ctgtgccacg ccctggcatg ctgctgacat ctggccgcca atttcagcgg gcccttttcc 6901 cccttgttca ccccatagca agaagggtag gttacatggg tattttccca tcagcacctg 6961 actggccggt gcaattagag gagagggcaa caacgcaagg ctgttgtttt atttgggtta 7021 caagagctgc ggcggtcgat gggttcactg attacggttt cctagattgt acagatgaac 7081 tagaactgtc acaatctatg gggtcgtaga cagtgtgctt accagacttc catggaagat 7141 gtgaatttgc tgctagctat atgggtggtg ctatgggctc cctagggact catgtagtgg 7201 ggctttgtga tagctaatga atgtggcagc tgttgtttgt actggaccct gaattggaaa 7261 cagtaacttg gattctgtaa cacttcatgg gtcccgtagt gacaactatg ctgaatatct 7321 tgaatatggg aggagggggg ctttgggttc cattgtgtgc cctttcctgg ccaacgtgag 7381 ggtcctagtg ttatagggcg tggcagtttt cttgagggct aataacccgg gtgaggcggt 7441 tgtcacaggt gctagaccct ggagttgaac cagtaccact cggttacaaa gtcatggtct 7501 agtagttgtg accctgcaaa gctacgtggg gatgagcagc cagggacttt ggttggcaag 7561 cagacaggcg gcgcattgga accccagagg agtgtcccgg ggccacctct ttggttctgt 7621 acatattttg ttattgtaca taaccatgga gttggctgtg gtgcactcca tctggtaagg 7681 gggctggtgc ggacgcctgt gtttagtcta tgccaatgtt tacctgcctt gggttactat 7741 tccaaacgac cacacctttg aggacacctg gagccctgat cattctcggc ttttactgcc 7801 acctggcttc tgttgggtca gacagtttgg tgcgctagtt gtgtgcttag cagcaacgca 7861 caccaggctg actgccttag cagtgtggcc ctttattgtg gcatcctaag gagggattct 7921 ggagtgcctt tcgcgtgaag catgccctga gacgtactcg agttaggact taatcgctcc 7981 tgtgccgctg gatgagggag cgccaatttg tacatcctag ctctggccat agagttagcc 8041 cacccttgtg tctccctttg gcctttgcgg tgccaatttc cggtggtttc ccttttccgc 8101 ccgtttatcc aatagcatgt aagagaggtt gcctagattt ggcaactttg agggaacgtt 8161 ccgtgtagct ggtgacctaa cacccgccca tcaccaccgg acagattctg aacttgtcct 8221 gtggtgtttg gtgtggtttt ggggtacgca ggagtacgtt ggaatgcttt ggagccgaga 8281 gggatgggcc cgcttgtgcg cttatgtgtt acacggtgcc aataaccggc ccggtgcggc 8341 tgccccgtga cccgtgggcc ttaccttcct ggccatcggg ggaccctggt gctagggtcc 8401 cttgtgttgc tttctgccat aggggggaaa gcatcgcctt cagaattggc tgctccgttg 8461 gaacatttga ggcctactgt atccgtgtcc tgacaacatt ccccgcaaac atgacatggg 8521 ttaatttaaa catgttttgt ttgcttggga atgctcttag ggcctggaag cttgtcattg 8581 gattcatcgt ttcctgaact acaggcgtag ggcctattgt agcaggcatg tcttcattcc 8641 tgcgtaccga atggcatgaa ggcacagcct gttaccattg gcaccttttt tccatgtaaa 8701 cctccgtgat cctgggtcct ttggagactc aagtgtgaat ttgttttggt gttcggcgcc 8761 agggtatctc gacgttggaa tgtcaactca acttgggcac ctcgataacc ggctcgtggc 8821 tcgtacagac gattgtttgg ctctgtaact tgccagggac ggctgacgat gtgtttagtc 8881 tgccacttgc atccggcgct ttggttactc gggagactaa tggggggtgt ggtatggcac 8941 aggctggggg tgagtctggg gatgtccctg ggcgttgctg cagcccattc gccctctggg 9001 gatgagatgt tcaggggtgg ccggtaccct acgctgccga tttacataat ataaattgta 9061 aatgctgcag tagtagggat ctggacgcgc gacctgctac tcttcggaaa cgccaaccca 9121 ggagcgtcgc ctctggcccc atactcccgc catgcgactg ctcgccccct cccaggcctc 9181 cctggtgagc ccttgccgct ccccgcattc ctgctttcgg cgcccctgcg gatcccgatg 9241 acagcaggcc tttccttccc ccgttaatga aaagaatgac agtgaggttg tgacagaagg 9301 acagctttat tcagtttaca gagtgccctc ggaggctacg atattcccgt taaatgtctt 9361 gttgattctc tcaaaggtgg ggagggagga gctctccaca acaatgttcc ctggcagcgt 9421 gagcgcgcag ccctgccgtt ggatgtatct tctcatgatg gtgctgatag aggggtctcc 9481 ggcgtagatg aaaaaggcct gggccatgct ctggccggtc acgatcgtta tggggttgtt 9541 ggaaatgttc cggaccgtca gcttgagggt ctggcccggc ttccactcct gtgggtagac 9601 gtagaagacc gggttggagg agtgggacac gacaacggcc gtaatcttgg agctcagggg 9661 ggcctcgtag gtgttgttgt attccagctc cgtgatgaaa ttaggaggaa taatcacagg 9721 ggagccaaag tagcggatgt ctgtggattc cccgtcccag cgccagtggc tcttagggta 9781 ggggttgtaa cggaaggcaa taatcacatc atccaatagg gtcatgccca ccttgacgtt 9841 cagcgggccc tctcgtttca ggtccggcgt gtccacggag actcggacgt agcccttacc 9901 gcggcgtatg gcgtttaccg gacacacctt ccccgggaat gtgtgaatac gggcgtatga 9961 ctttagaaat gggggcgtgt gctgcgccag caggtaaggc aggcactcgt cctggctggt 10021 gacgggagag ccactgagga agatctgggg ctcgctggtg tttagcttgt ccccgctctg 10081 ggtgcaggag cgtgtcagct gaatgtcgct ctgcccgggc agaatctgca ggtagaggta 10141 ggggttcttg accaatctga tgggcacaat gtaccaggta aacttccctt tctctatgaa 10201 caggctgcgc ggattcagga cgcttagcac gatgtcctgg tcagagtgca taacgaagaa 10261 gggcttgagg aatacctcgt tgtcttccgc tccaaagaac aaaaacgcga ccgtaaagta 10321 gcggctgccg taggtggtcg tgttgaagga gaaagaaggt aacttgaagc tgagtatctg 10381 gcccaccgag gggcagggag gcagctcttg gcactgcgcg tccagctgca atacctgctt 10441 gttggtgacg cggacgtatg aggggaagat ctcgtacttc cacacgcctc tcatgaacga 10501 cgtgtctggt ttttcagtgg gccgcaggcg gcggaggctg ttcctgaacg acgagcgccg 10561 ggacgctagt gctgcatggg ctcctccggg gtaagcttcg gccatggccg gagctcgtcg 10621 acgggcaagg tgagagtcgg ggggcgggcg acggtgcggc cccaatacaa ctctccgctc 10681 gttagctggt agaatatccg cccggcgtct aggttgtcac ttcgctcggc cggccagaag 10741 agcgcaagtc caagtctggt gctggggccg atgtgcagcg gtttgtgccc gcagttgtag 10801 actgtcattt ttatgggcga gtgggcggtc cacacgcgcg ggcgcagcac ccattggtcg 10861 cacgccgcct cctggaatgt aaacccccag agagagggcg tgccgccctg gagatggccc 10921 tgtgccatca catgtatttc ctccttgggt ggaacaacgg cgtcgtgctc cgggtggagg 10981 gggaatagcg tccaggcatc tttcagggtc acgagaccgg ggtccatgct cagagaacag 11041 ccctcccggg cggtgggcgg cccgggctcc agcagaacgt cgcagaccca gccctcctcg 11101 gccctgtcca cctgtatgtc caggtgcacg gacccggagg ctgcgtctcg tgacatggcc 11161 aggcctggtg ccagccgacc acgtcccgtg tcccagccga ggccgcgcca gagcagagcc 11221 cgggactgac tcagggccac atcccctcgg cccgcggacg ccgcctcgcc agcccccggg 11281 ccttcatggg cccgctttct acctctctcc ggcaccccag cctggtcagc cgcagaggaa 11341 gcatgacctt ggggtgggac ggggcaggcg tgatcctggg cgcaatcttt gccgatcccc 11401 acaccttcac tccttgttag gttgatagaa tgtcggtacc acgccacggg gggcgggccc 11461 gcatagggaa aagccaggga gagcgatgtg ggcgaggatg ggctcaggcg gccccagaca 11521 cgcaatttgc ccccctgggc ggccgcagcc tgcccctcgg cggcccgtgc cccagctccg 11581 tcacgggggg cgcataggag gggtatatct aggatagccg cacctacaca aatgagacac 11641 agacacaggt cgtgaggatt taggcaacgc aggcttgtct ttatagttac aaacatggga 11701 gcgtgcacct ggaagatgca gctggggtag atctttacat ctttacaggg cgcagcggcc 11761 gccagacact gaagggcaga gttcacggcg ggcacctccc agagggagcc caccagcccg 11821 tacctggcca cggcc // LOCUS HUMG25KA 1014 bp ss-mRNA PRI 02-AUG-1990 DEFINITION Human GTP-binding protein (G25K) mRNA, complete cds. ACCESSION M35543 KEYWORDS G25K gene; GTP-binding protein G25K. SOURCE Human fetal brain, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1014) AUTHORS Munemitsu,S., Innis,M.A., Clark,R., McCormick,F., Ullrich,A. and Polakis,P. TITLE The molecular cloning and expression of G25K, the human homolog of the yeast cell cycle gene CDC42 JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.Munemitsu, 25-JUN-1990. Author address: S.Munemitsu Cetus Corporation 1400 53rd Street Emeryville, CA 94608 FEATURES from to/span description pept 4 579 GTP-binding protein G25K BASE COUNT 286 a 204 c 210 g 314 t ORIGIN 1 gcaatgcaga caattaagtg tgttgttgtg ggcgatggtg ctgttggtaa aacatgtctc 61 ctgatatcct acacaacaaa caaatttcca tcggaatatg taccgactgt ttttgacaac 121 tatgcagtca cagttatgat tggtggagaa ccatatactc ttggactttt tgatactgca 181 gggcaagagg attatgacag attacgaccg ctgagttatc cacaaacaga tgtatttcta 241 gtctgttttt cagtggtctc tccatcttca tttgaaaacg tgaaagaaaa gtgggtgcct 301 gagataactc accactgtcc aaagactcct ttcttgcttg ttgggactca aattgatctc 361 agagatgacc cctctactat tgagaaactt gccaagaaca aacagaagcc tatcactcca 421 gagactgctg aaaagctggc ccgtgacctg aaggctgtca agtatgtgga gtgttctgca 481 cttacacaga gaggtctgaa gaatgtgttt gatgaggcta tcctagctgc cctcgagcct 541 ccggaaactc aacccaaaag gaagtgctgt atattctaaa ctgttttctc cttcccttct 601 ttgctgctgc ttcctgtccc actactgtag aaagatcgtt taaaaacaaa ggaataaaac 661 catcctgttt gaaagcctct gcgtcttttt actcaccacc ttagagcaac ctctgtatta 721 gtttttgatc aagaattgca atatcatata aattttttgt gatcagtagt caagttggac 781 ttgttttaac gttctgctgc ttgagttgcc tgatgctcag agctttttgg tttggattac 841 tattgcaaag ggaacttggt ctggcttaga tgtcctcttg gagaaaataa caagagtttt 901 aacacttcta gatcttagtt cagatggaga aagtaacaca aacatcattt tactcttatg 961 atcaattgtt aattgtaatt gcatgacaaa ccttatggaa aaggggtgac ctgg // LOCUS HUMMUCAB 1804 bp ss-mRNA PRI 02-AUG-1990 DEFINITION Human polymorphic epithelial mucin (PEM) mRNA, complete cds. ACCESSION J05581 KEYWORDS polymorphic epithelial mucin. SOURCE Human adult mammary adenocarcinoma cell line BT20, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1804) AUTHORS Gendler,S.J., Lancaster,C.A., Taylor-Papadimitriou,J., Duhig,T., Peat,N., Burchell,J., Pemberton,L., Lalani,E.-N. and Wilson,D. TITLE Molecular cloning and expression of the human tumour-associated polymorphic epithelial mucin, PEM JOURNAL J. Biol. Chem. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.J.Gendler, 26-JUN-1990. FEATURES from to/span description pept 73 1500 polymorphic epithelial mucin (PEM) precursor sigp 73 135 polymorphic epithelial mucin signal peptide matp 136 1497 polymorphic epithelial mucin signal 1783 1788 poly-A signal mRNA < 1 1804 PEM mRNA BASE COUNT 361 a 622 c 434 g 387 t ORIGIN 1 cgctccacct ctcaagcagc cagcgcctgc ctgaatctgt tctgccccct ccccacccat 61 ttcaccacca ccatgacacc gggcacccag tctcctttct tcctgctgct gctcctcaca 121 gtgcttacag ttgttacagg ttctggtcat gcaagctcta ccccaggtgg agaaaaggag 181 acttcggcta cccagagaag ttcagtgccc agctctactg agaagaatgc tgtgagtatg 241 accagcagcg tactctccag ccacagcccc ggttcaggct cctccaccac tcagggacag 301 gatgtcactc tggccccggc cacggaacca gcttcaggtt cagctgccac ctggggacag 361 gatgtcacct cggtcccagt caccaggcca gccctgggct ccaccacccc gccagcccac 421 gatgtcacct cagccccgga caacaagcca gccccgggct ccaccgcccc cccagcccac 481 ggtgtcacct cggccccgga caccaggccg gccccgggct ccaccgcccc cccagcccat 541 ggtgtcacct cggccccgga caacaggccc gccttgggct ccaccgcccc tccagtccac 601 aatgtcacct cggcctcagg ctctgcatca ggctcagctt ctactctggt gcacaacggc 661 acctctgcca gggctaccac aaccccagcc agcaagagca ctccattctc aattcccagc 721 caccactctg atactcctac cacccttgcc agccatagca ccaagactga tgccagtagc 781 actcaccata gcacggtacc tcctctcacc tcctccaatc acagcacttc tccccagttg 841 tctactgggg tctctttctt tttcctgtct tttcacattt caaacctcca gtttaattcc 901 tctctggaag atcccagcac cgactactac caagagctgc agagagacat ttctgaaatg 961 tttttgcaga tttataaaca agggggtttt ctgggcctct ccaatattaa gttcaggcca 1021 ggatctgtgg tggtacaatt gactctggcc ttccgagaag gtaccatcaa tgtccacgac 1081 gtggagacac agttcaatca gtataaaacg gaagcagcct ctcgatataa cctgacgatc 1141 tcagacgtca gcgtgagtga tgtgccattt cctttctctg cccagtctgg ggctggggtg 1201 ccaggctggg gcatcgcgct gctggtgctg gtctgtgttc tggttgcgct ggccattgtc 1261 tatctcattg ccttggctgt ctgtcagtgc cgccgaaaga actacgggca gctggacatc 1321 tttccagccc gggataccta ccatcctatg agcgagtacc ccacctacca cacccatggg 1381 cgctatgtgc cccctagcag taccgatcgt agcccctatg agaaggtttc tgcaggtaat 1441 ggtggcagca gcctctctta cacaaaccca gcagtggcag ccacttctgc caacttgtag 1501 gggcacgtcg cccgctgagc tgagtggcca gccagtgcca ttccactcca ctcaggttct 1561 tcagggccag agcccctgca ccctgtttgg gctggtgagc tgggagttca ggtgggctgc 1621 tcacaccgtc cttcagaggc cccaccaatt tctcggacac ttctcagtgt gtggaagctc 1681 atgtgggccc ctgaggctca tgcctgggaa gtgttgtggt gggggctccc aggaggactg 1741 gcccagagag ccctgagata gcggggatcc tgaactggac tgaataaaac gtggtctccc 1801 actg // LOCUS RABGHKAB 1367 bp ss-mRNA MAM 02-AUG-1990 DEFINITION O.cuniculus gastric H+ - K+ ATPase beta subunit mRNA, complete cds. ACCESSION M35544 KEYWORDS H+ - K+ ATPase beta subunit. SOURCE O.cuniculus (strain New Zealand White) adult stomach, cDNA to mRNA, clone RB-49. ORGANISM Oryctolagus cuniculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Lagomorpha; Leporidae. REFERENCE 1 (bases 1 to 1367) AUTHORS Reuben,M.A., Lasater,L.S. and Sachs,G. TITLE Characterization of a beta subunit of the gastric H,K ATPase JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.A.Reuben, 25-JUN-1990. FEATURES from to/span description pept 54 929 H+/K+ ATPase beta subunit mRNA 1 1367 H+/K+ ATPase beta subunit mRNA BASE COUNT 293 a 450 c 376 g 248 t ORIGIN 1 tgtccatcta aggggtgcag ggtgggggag cggcggcttc cacagcagac accatggccg 61 ccttgcagga gaagaagtcg tgcagccagc gcatggagga gttccgccac tactgctgga 121 acccggacac ggggcagatg ctgggccgca ccctgtcccg ctgggtgtgg atcagcctct 181 actacgtggc cttctacgtg gtgatgaccg ggctgtttgc cctgtgcatc tacgtgctca 241 tgcaaaccat cgacccctac acgcctgact accaggacca gctgaagtcg ccaggcgtaa 301 ccttaaggcc agacgtgtat ggggagaagg gcctggaaat ccactacaac atctctgaca 361 accgcacctg gaccagcctc acgcacaccc tgagaagctt cctggcaggt tactcacccg 421 cagcccaggt ggacaacatc aactgcacct ccaagaccta cttcttccag gagagcttcg 481 gggctcccaa ccacaccaag ttctcctgca agttcacggc ggacatgctg gagaactgct 541 ccggcctcac cgaccccagc ttcggcttca aggaaggaaa gccctgcttc atcattaaga 601 tgaacaggat tgtcaggttc ctgcccagca acagcacacc accccgcgtg gactgcacct 661 tcctggacat gccccaccag gccctcacgc cgctgcaggt cgagtactac ccccccaacg 721 gcaccttcag cctccactac ttcccttact acggaaagaa agcgcagccg cactacagca 781 accctctggt ggccgccaag ctcctcaacg tgcccacgaa cacggaggtc gtggtcctct 841 gcaagatcct ggccgatcac gtgaccttcg acaacccgca cgacccctac gaggggaaag 901 tggagttcaa gctcaagatc cagaagtgag ctcgcggtcg tgggtctcac gggggtcccg 961 ctgggccctg tggacgcgtt tctgaggccc gcaccagtgc ccccctggga gcgccaggca 1021 agcagccgcg tgcacagcgc ttccattggc gtccgctgct tcccgtggtg tcccgtcccg 1081 tgcaggcgca tctgtagtag gatggaaaat gccggctaac ccagccatgg caaggcggcg 1141 accgcgagtg cccagagccc agaactgacc cgtcctttcc gtgcggggag caccttcttg 1201 ctaccattgg tttttctgac gtcagtgtga gcggcttccc agatgacgca ggggctgtta 1261 gtgtgctgag gtgcggtgac gtgagacgcc catggcaacc cccactcaca gcgcaatccc 1321 cgtgttgtaa aaataaaacg tgttagttac tctaggtaaa acaaaaa // LOCUS ECOTRRNA23 485 bp ss-rRNA RNA 02-AUG-1990 DEFINITION E.coli 23S small subunit ribosomal RNA, 5' end. ACCESSION M24881 KEYWORDS 23S ribosomal RNA; small subunit ribosomal RNA. SOURCE E.coli rRNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 485) AUTHORS Branlant,C., Sri Widada,J., Krol,A. and Ebel,J.-P. TITLE RNA sequences in ribonucleoprotein fragments of the complex formed from ribosomal 23-S RNA and ribosomal protein L24 of Escherichia coli JOURNAL Eur. J. Biochem. 74, 155-170 (1977) STANDARD simple staff_review FEATURES from to/span description rRNA 1 > 485 23S rRNA BASE COUNT 143 a 105 c 151 g 86 t ORIGIN 1 ggttaagcga ctaagccgga gcgtacacgg atggtgcaac gccctgggca gtcagagagc 61 gtgcgatgaa ggacgctaat ctgataagcg atatggtaag gtcgaaccgt gttataaccg 121 atttccggcg aatggggaaa cagtgtgttt cgacacacta tcattaactg aatcaatagg 181 ttaatgaacc ggggggaact gaaacatcta agtaccccga aaaggggaaa taaccgagat 241 tcccccagta gagagcgtag ggcccagagc ctgaacgaat cagtgtgtgg aagcgataca 301 gggtgaaagg gcgtgtctgt tagcgccccg acagtacaca aaaatgcaca tgctgagctc 361 gggacacgag tgatgagggg gggcgcgaaa agaaccccga aagggggcgt ctgaatatgt 421 atccctgacc atcctccaag gctaaatacc cttggggggg gactgaccga tagtaccgaa 481 gagtg // LOCUS KPNNIFBQ 2178 bp ds-DNA BCT 02-AUG-1990 DEFINITION K.pneumoniae nitrogen fixation (nifB and niQ) genes, complete cds. ACCESSION M15545 KEYWORDS nitrogen fixation protein. SOURCE K.pneumoniae DNA. ORGANISM Klebsiella pneumoniae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 2178) AUTHORS Buikema,W.J., Klingensmith,J.A., Gibbons,S.L. and Ausubel,F.M. TITLE Conservation of structure and location of Rhizobium meliloti and Klebsiella pneumoniae nifB genes JOURNAL J. Bacteriol. 169, 1120-1126 (1987) STANDARD simple staff_review FEATURES from to/span description pept 199 1605 nitrogen fixation B (nifB) pept 1605 2108 nitrogen fixation Q (nifQ) BASE COUNT 402 a 670 c 692 g 414 t ORIGIN 1 tcagattatg gatatcacca tgccgcgact gtgaagcctt atgtgagatt caggacattg 61 tcgccagcgc ggcggaattg cgacaattca gggacgcggg ttgccggtta aaaagtctac 121 ttttcatgcg gttgcgaaat taacctctgg tacagcattt gcagcaggaa ggtatcgccc 181 aaccacgaag gtacgaccat gacttcctgc tcctcttttt ctggcggcaa agcctgccgc 241 ccggcggatg acagcgcatt gacgccgctt gtggccgata aagctgccgc gcacccctgc 301 tactctcgcc atgggcatca ccgtttcgcg cggatgcatc tgcccgtcgc gcccgcctgc 361 aatttgcagt gcaactactg taatcgcaaa ttcgattgca gcaacgagtc ccgccccggg 421 gtatcgtcaa cgctgctgac gcctgaacag gcggtcgtga aagtgcgtca ggtcgcgcag 481 gcgatcccgc agctttcggt ggtgggcatc gccgggcccg gcgatccgct cgccaatatc 541 gcccgcacct ttcgcaccct ggagctgatc cgcgaacagc tgccggacct gaaattatgc 601 ctgtcgacca acggactgat gctgcctgac gcggtggacc gcctgctgga tgtcggcgtt 661 gaccacgtca cggtcaccat taacaccctc gacgcggaga ttgccgcgca aatctacgcc 721 tggctatggc tggacggcga acgctacagc gggcgcgaag gcggagagat cctgattgcc 781 cgtcagcttg agggcgtacg caggctgacc gccaaaggcg tgctggtgaa aataaattcg 841 gtgctgatcc ccggtatcaa cgatagcggc atggccgacg tgagccgcgc gctgcgggcc 901 agcggcgcgt ttatccataa tattatgccg ctgatcgcca ggccggagca cggcacggtg 961 tttcggctca acggccagcc ggagccggac gccgagacgc tcgccgccac ccgcagccgg 1021 tgcggcgaag tgatgccgca gatgacccac tgccaccagt gtcgcgccga cgccattggg 1081 atgctcggcg aagaccgcag ccagcagttt acccagcttc cggcgccaga gagtctcccg 1141 gcctggctgc cgatcctcca ccagcgcgcg cagctgcacg ccagcattgc gacccgcggc 1201 gaatctgaag ccgatgacgc ctgcctggtc gccgtggcgt caagccgcgg ggacgtcatt 1261 gattgtcact ttggtcacgc cgaccggttc tacatttaca gcctctcggc cgccggtatg 1321 gtgctggtca acgagcgctt tacgcccaaa tattgtcagg ggcgcgatga ctgcgagccg 1381 caggataacg cagcccggtt tgcggcgatc ctcgaactgc tggcggacgt taaagccgta 1441 ttctgcgtgc gtatcggcca tacgccgtgg caacagctgg aacaggaagg cattgaaccc 1501 tgcgttgacg gcgcgtggcg gccggtctcc gaagtgctgc ccgcgtggtg gcaacagcgt 1561 cgggggagct ggcctgccgc gttgccgcat aagggggtcg cctgatgccg ccgctcgact 1621 ggttgcggcg cttatggctg ctgtaccacg cggggaaagg cagctttccg ctgcgcatgg 1681 ggcttagccc gcgcgattgg caggcgctgc ggcggcgcct gggcgaggtg gaaacgccgc 1741 tcgacggcga gacgctcacc cgtcgccgcc tgatggcgga gctcaacgcc acccgcgaag 1801 aggagcgcca gcagctgggc gcctggctgg cgggctggat gcagcaggat gccgggccga 1861 tggcgcagat tatcgccgag gtttcgctgg cgtttaacca tctctggcag gaatcttggt 1921 ctggcatcgc cgccgaattg cgcctgctga tgagcgactg ctttccacag ctggtggtga 1981 tgaacgaaca caatatgcgc tggaaaaagt tcttttatcg tcagcgctgt ttgctgcaac 2041 agggggaagt tatctgccgt tcgccaagct gcgacgagtg ctgggaacgc agcgcctgtt 2101 ttgagtagcc gtttcccgaa gggggcgctg caaacaaaaa agccggaggt ttccctccgg 2161 cttttcacat catcaaat // LOCUS RHMNIFB 1722 bp ds-DNA BCT 02-AUG-1990 DEFINITION R.meliloti nitrogen fixation B (nifB) gene, complete cds. ACCESSION M15544 KEYWORDS nitrogen fixation protein. SOURCE R.meliloti DNA. ORGANISM Rhizobium meliloti Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Rhizobiaceae. REFERENCE 1 (bases 1 to 1722) AUTHORS Buikema,W.J., Klingensmith,J.A., Gibbons,S.L. and Ausubel,F.M. TITLE Conservation of structure and location of Rhizobium meliloti and Klebsiella pneumoniae nifB genes JOURNAL J. Bacteriol. 169, 1120-1126 (1987) STANDARD simple staff_review FEATURES from to/span description pept 199 1671 nitrogen fixation B protein (nifB) BASE COUNT 422 a 476 c 481 g 343 t ORIGIN 1 gcgtcgcgag cgtcgcctct tttctccgtc ctttcgaaac acgaccggat gcaattcaac 61 tttgcccttg tcggaagtcc gacaagcctg tgagcaaaga gacaggaccg aatccaaaga 121 cgccaatcca ttgacgaaaa ggatttggca tagctgttgc tggttgaatt gcaaaatcac 181 cctccactgg agttgttcat gtccacaccc atgattttgc gtgagagccg gaccagcact 241 acattctctg accagttgct ggagaacgct aaatcggttg gctgctcacc cccatcgacg 301 gcgccgggcg acatagatcc tggaacttgg gacaagatta agaatcaccc ctgtttttca 361 gaggaggcgc atcactattt cgcgcgcatg cacgtggcgg tcgcgcctgc ctgcaacatc 421 caatgtaact attgcaatcg caaatacgat tgcgccaacg aaagtcggcc cggtgttgcc 481 tcggaaaagc tcacacctga ccaggcggtg cgaaaggtga ttgccgttgc caacgaagtg 541 cctcagctgt cagtgcttgg catcgctggg cctggcgatg cctgttacga ctggaagaaa 601 acaagggcga cgttcgaacg agtggctagg gaaattcccg acataagact ctgcatctcc 661 acgaacgggc tctcgctgcc ggaccatgtc gatgagcttg ccgaaatgaa cgtcgatcac 721 gtgacgatca ccatcaacat ggtcgatccg cgtgtcggcg taaagatcta cccctggatt 781 tactatggtc agcgccgcca cactggtatc gacgctgcga gaatcctgca cgaacggcag 841 atgttgggcc tggagatgct agccgaacgc ggcatcctca ccaaggtcaa ctcggtaatg 901 atccccggcg tcaatgatga gcacctgatc gaagtcaaca aagttgtgaa aggaagaggc 961 gcgttgctgc acaacgtaat gccgctaatt tcaaaccgca tacacgggac ctattacgga 1021 ctgacagggc agcgcggccc ggaggccttc gaactgcagg cccttcagga ccgtctagaa 1081 ggaaccaaac tgatgcgtca ttgtcgacat tgccgggccg atgccatagg cttgctcggc 1141 gatgatcgtg gtcacgagtt cacgctcgct gaaatccccg acgagataac ctacgatgcc 1201 agcaagcgac aggcctatcg ccagttggtc gcgcgcgaac gcggggacca cctagtggcc 1261 aagaacgagg cgaacagaac ggtaatgtcg gtggaatatg gcggatcgct tctcattgcc 1321 gtggcgacca aaggcggggg ccggatcaac gaacattttg gacacgcgaa agaatttcac 1381 gtttataccg tctcccagag agggatcaag ctggcaggcc gccgcagggt tgagcagtat 1441 tgcctcggcg gttggggcga ggtcgccacc ctcgatcaca tcgtcgttgc gcttgaagga 1501 atagacatcc tgctctgcgt caaaatcgga gattacccaa ggaaacagct gacacaggcc 1561 gggcttcgag cgacggaagc ttatggccat gactacatcg agagtgcgct cgaaagctct 1621 acgccgccga gtttggctat cgaaccaccg gtaaagacgg cgacacgttg agctgccctc 1681 cgactgaata aggagtttaa aatggccttc aagattattg ca // LOCUS AKOMTCYTBA 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.boliviensis mitochondrial cytochrome b gene, 5' end. ACCESSION M35691 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.boliviensis (MVZ catalog # 171607) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon boliviensis Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon boliviensis. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 122 a 111 c 52 g 116 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta ctcaaaattg ttaatcactc attcattgac 61 ctaccaactc catctaacat ctcatcctga tgaaattttg gatccctact aggcatatgc 121 ctaataatcc aaattttaac aggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cctcagtagc acatatctgc cgagatgtaa actacggatg attaatccgc 241 tacttgcacg ctaatggagc ctccatattc tttatctgcc tcttcatcca cgtaggccga 301 ggtatttact atggttccta taccctctca gaaacctgaa acattggcat catcttattc 361 ctcacaacta tagcaacagc atttgtagga tatgtactcc c // LOCUS AKOMTCYTBB 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.boliviensis mitochondrial cytochrome b gene, 5' end. ACCESSION M35692 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.boliviensis (MVZ catalog # 171608) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon boliviensis Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon boliviensis. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 122 a 112 c 52 g 115 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta ctcaaaattg ttaatcactc attcattgac 61 ctaccaactc catctaacat ctcatcctga tgaaattttg gatccctact aggcatatgc 121 ctaataatcc aaattttaac aggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cctcagtagc acatatctgc cgagatgtaa actacggatg attaatccgc 241 tacttgcacg ctaatggagc ctccatattc tttatctgcc tcttcatcca cgtaggccga 301 ggtatttact atggttccta caccctctca gaaacctgaa acattggcat catcttattc 361 ctcacaacta tagcaacagc atttgtagga tatgtactcc c // LOCUS AKOMTCYTBC 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.puer mitochondrial cytochrome b gene, 5' end. ACCESSION M35693 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.puer (MVZ catalog # 171612) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon puer Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon puer. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 122 a 112 c 52 g 115 t ORIGIN 1 atgaaaattt tacggaaaaa ccacccacta ctcaaaatta ttaatcactc atttattgac 61 ctaccaactc catctaacat ctcatcctgg tgaaattttg gatccctact aggcatatgc 121 ctagtaatcc aaattctaac aggcctattc ctagccatac actatacatc agacacaacc 181 acagcattct cctcagtagc ccacatctgc cgagatgtaa attacggatg attaatccgc 241 tatctacacg ccaatggagc ttctatattc tttatctgcc tcttcatcca tgtaggccga 301 ggtatttact acggctccta tgtcctctca gaaacctgaa acatcggcat catcttattc 361 ctcacaacta tagcaacagc attcgtagga tatgtactac c // LOCUS AKOMTCYTBD 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.subfuscus mitochondrial cytochrome b gene, 5' end. ACCESSION M35694 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.subfuscus (MVZ catalog # 172969 and 172970) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon subfuscus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon subfuscus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 120 a 112 c 53 g 116 t ORIGIN 1 atgaaaattt tacggaaaaa ccacccacta ctcaaaatta ttaatcactc attcattgac 61 ttaccaactc catctaacat ctcatcctga tgaaatttcg gatccctact aggcatatgc 121 ttagtgatcc aaattctaac aggcctgttc ctagccatac actatacatc cgacacaact 181 acagcattct cctcagtagc ccatatctgc cgagatgtaa actacggatg actaatccgc 241 tacttacacg ctaatggagc ctctatattc ttcatctgcc tcttcatcca tgtaggccga 301 ggtatttact acggctccta tgtcctctca gaaacttgaa acatcggcat catcttattc 361 ctcacaacta tagcaacagc attcgtagga tatgtattac c // LOCUS AKOMTCYTBE 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.subfuscus mitochondrial cytochrome b gene, 5' end. ACCESSION M35695 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.subfuscus (MVZ catalog # 174109 and 174110) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon subfuscus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon subfuscus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 120 a 113 c 53 g 115 t ORIGIN 1 atgaaaattt tacggaaaaa ccacccacta ctcaaaatta ttaatcactc attcattgac 61 ttaccaactc catctaacat ctcatcctga tgaaatttcg gatccctact aggcatatgc 121 ttagtgatcc aaattctaac aggcctgttc ctagccatac actatacatc cgacacaact 181 acagcattct cctcagtagc ccatatctgc cgagatgtaa actacggatg actaatccgc 241 tacttacacg ctaacggagc ctctatattc ttcatctgcc tcttcatcca tgtaggccga 301 ggtatttact acggctccta tgtcctctca gaaacttgaa acatcggcat catcttattc 361 ctcacaacta tagcaacagc attcgtagga tatgtattac c // LOCUS AKOMTCYTBF 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.subfuscus mitochondrial cytochrome b gene, 5' end. ACCESSION M35696 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.subfuscus (MVZ catalog # 174229 and 174230) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon subfuscus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon subfuscus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 122 a 116 c 51 g 112 t ORIGIN 1 atgaaaattt tacggaaaaa ccacccacta ctcaaaatta ttaatcactc attcattgac 61 ttaccaactc catctaacat ctcatcctga tgaaatttcg gatccctact aggcacatgc 121 ttagtaatcc aaattctaac aggcctattc ctagccatac actatacatc cgacacaact 181 acagcattct cctcagtagc ccatatctgc cgagatgtaa actacggatg actaatccgc 241 tacttacacg ctaacggagc ctctatattc ttcatctgcc tcttcatcca tgtaggccga 301 ggtatttact acggctccta cgtcctctca gaaacttgaa acatcggcat catcttattc 361 ctcacaacta tagcaacagc attcgtagga tatgtactac c // LOCUS AKOMTCYTBG 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.kofordi mitochondrial cytochrome b gene, 5' end. ACCESSION M35697 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.kofordi (MVZ catalog # 171665 and 171666) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon kofordi Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon kofordi. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 122 a 116 c 51 g 112 t ORIGIN 1 atgaaaattt tacggaaaaa ccacccacta ctcaaaatta ttaatcactc attcattgac 61 ttaccaactc catctaacat ctcatcctga tgaaatttcg gatccctact aggcacatgc 121 ttagtaatcc aaattctaac aggcctattc ctagccatac actatacatc cgacacaact 181 acagcattct cctcagtagc ccatatctgc cgagatgtaa actacggatg actaatccgc 241 tacttacacg ctaacggagc ctctatattc ttcatctgcc tcttcatcca tgtaggccga 301 ggtatttact acggctccta cgtcctctca gaaacttgaa acatcggcat catcttattc 361 ctcacaacta tagcaacagc attcgtagga tatgtactac c // LOCUS AKOMTCYTBH 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.juninensis mitochondrial cytochrome b gene, 5' end. ACCESSION M35698 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.juninensis (MVZ catalog # 173038 and 173039) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon juninensis Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon juninensis. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 117 a 115 c 57 g 112 t ORIGIN 1 atgaaagtct tacgaaaaaa tcacccacta ctcaaaattg ttaatcactc atttatcgat 61 ctaccaaccc catctaacat ctcatcctga tggaatttcg ggtccctact aggcacatgc 121 ctagtaatcc aaattctaac aggcctattc ctagccatac actacacgtc agatacaacc 181 acagcattct cctcagtagc ccacatctgc cgagatgtaa actacggatg attaatccgc 241 tacttacacg ctaacggagc ctctatattc tttatctgcc tcttcatcca tgtaggccga 301 gggatttact acggctccta catcctctca gaaacctgaa acattggcat catcttgttt 361 ctcacaacta tagcaacagc atttgtaggg tatgtacttc c // LOCUS AKOMTCYTBI 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.mollis mitochondrial cytochrome b gene, 5' end. ACCESSION M35699 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.mollis (MVZ catalog # 173057 and 173058) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon mollis Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon mollis. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 120 a 110 c 54 g 117 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaatta ttaatcactc attcattgac 61 ctaccaaccc catccaacat ctcatcttga tgaaactttg ggtcactgct cggtgtatgc 121 ctaataatcc aaatcctaac tggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cctcagtagc ccacatttgt cgagatgtaa actacggatg attaatccgc 241 tatctacacg ctaacggagc ttccatattc tttatttgcc ttttcatcca tgtaggccga 301 ggaatctatt acggctccta tgtcctctca gaaacctgaa acatcggtat catcctattc 361 cttacaacta tagcaacagc attcgtagga tatgtattac c // LOCUS AKOMTCYTBJ 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.torques mitochondrial cytochrome b gene, 5' end. ACCESSION M35700 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.torques (MVZ catalog # 171720) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon torques Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon torques. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 117 a 112 c 58 g 114 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg taaatcactc attcattgac 61 ttaccaaccc catccaacat ctcatcttga tgaaactttg ggtcactact cggtgtatgc 121 ctaataatcc aaattctgac cggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cttcagtagc ccacatttgc cgagatgtaa actacggatg attaatccgc 241 tatctacacg ctaacggagc ttccatattc tttatctgcc ttttcatcca tgtaggccga 301 ggaatctatt acggctccta tgtcctctca gaaacctgaa acgtcggtat catcctattc 361 ctcacaacta tagcaacagc attcgtaggg tacgtgttac c // LOCUS AKOMTCYTBK 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.torques mitochondrial cytochrome b gene, 5' end. ACCESSION M35701 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.torques (MVZ catalog # 171721) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon torques Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon torques. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 116 a 112 c 59 g 114 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg taaatcactc attcattgac 61 ttaccaaccc catccaacat ctcatcttga tgaaactttg ggtcactact cggtgtatgc 121 ctaataatcc aaattctgac cggcctgttc ctagccatac actacacatc agacacaacc 181 acagcattct cttcagtagc ccacatttgc cgagatgtaa actacggatg attaatccgc 241 tatctacacg ctaacggagc ttccatattc tttatctgcc ttttcatcca tgtaggccga 301 ggaatctatt acggctccta tgtcctctca gaaacctgaa acgtcggtat catcctattc 361 ctcacaacta tagcaacagc attcgtaggg tacgtgttac c // LOCUS AKOMTCYTBL 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.torques mitochondrial cytochrome b gene, 5' end. ACCESSION M35702 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.torques (MVZ catalog # 174053 and 174054) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon torques Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon torques. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 118 a 112 c 58 g 113 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg taaatcactc atttattgac 61 ttaccaaccc catccaacat ctcatcttga tggaactttg ggtcactact aggcgtatgc 121 ctaataatcc aaattctgac cggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cttcagtagc ccacatttgc cgagacgtaa actacggatg attaatccgc 241 tatctacacg ctaacggagc ttccatattc tttatctgcc ttttcatcca tgtaggccga 301 gggatctatt acggctccta tgccctctca gaaacctgaa acatcggtat catcttattc 361 ctcacaacca tagcaacagc attcgtaggg tatgtattac c // LOCUS AKOMTCYTBM 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.aerosus mitochondrial cytochrome b gene, 5' end. ACCESSION M35703 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.aerosus (MVZ catalog # 171679 and 1761680) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon aerosus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon aerosus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 115 a 107 c 59 g 120 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccacta cttaaaattg ttaatcactc atttattgac 61 ctaccaaccc cacccaacat ttcatcctga tggaattttg ggtcactact tggtgtatgc 121 ctaataatcc aaattctgac tggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cttcagtagc ccatatttgc cgagatgtaa actacgggtg gctaatccgc 241 tatctacatg ctaacggagc ctccatattc tttatctgcc tttttatcca cgtgggtcga 301 ggaatctact acggctccta tgtcctctca gaaacctgaa acatcggtat tatcttattc 361 cttacaacta tagcaacagc attcgtaggg tatgtactac c // LOCUS AKOMTCYTBN 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.aerosus mitochondrial cytochrome b gene, 5' end. ACCESSION M35704 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.aerosus (MVZ catalog # 172818 and 172819) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon aerosus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon aerosus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 110 a 114 c 60 g 117 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg ttaatcattc atttattgac 61 ctcccaaccc catctaacat ctcatcttga tggaatttcg ggtcactact cggtgtgtgc 121 ctagtaatcc aaattctgac cggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cctcagttgc ccacatttgc cgagatgtaa actacggatg attaattcgc 241 taccttcacg ctaacggagc ctccatattc tttatctgcc ttttcatcca cgtaggccga 301 ggaatctact acggctccta tgtcctctca gaaacctgaa acatcggtat catcctgttc 361 cttacaacta tagcaacagc attcgtaggg tatgttctac c // LOCUS AKOMTCYTBO 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.aerosus mitochondrial cytochrome b gene, 5' end. ACCESSION M35705 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.aerosus (MVZ catalog # 172849) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon aerosus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon aerosus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 111 a 114 c 59 g 117 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg ttaatcattc atttattgac 61 ctcccaaccc catctaacat ctcatcttga tggaatttcg ggtcactact cggtgtgtgc 121 ctagtaatcc aaattctgac cggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cctcagttgc ccacatttgc cgagatgtaa actacggatg attaattcgc 241 taccttcacg ctaacggagc ctccatattc tttatctgcc ttttcatcca cgtaggccga 301 ggaatctact acggctccta tgtcctctca gaaacctgaa acatcggtat catcctattc 361 cttacaacta tagcaacagc attcgtaggg tatgttctac c // LOCUS AKOMTCYTBP 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.aerosus mitochondrial cytochrome b gene, 5' end. ACCESSION M35706 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.aerosus (MVZ catalog # 172850) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon aerosus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon aerosus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 110 a 114 c 60 g 117 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg ttaatcattc atttattgac 61 ctcccaaccc catctaacat ctcatcttga tggaatttcg ggtcactact cggtgtgtgc 121 ctagtaatcc aaattctgac cggcctattc ctagccatac actacacatc agacacaacc 181 acagcattct cctcagttgc ccacatttgc cgagatgtaa actacggatg attaattcgc 241 taccttcacg ctaacggagc ctccatattc tttatctgcc ttttcatcca cgtaggccga 301 ggaatctact acggctccta tgtcctctca gaaacctgaa acatcggtat catcctgttc 361 cttacaacta tagcaacagc attcgtaggg tatgttctac c // LOCUS AKOMTCYTBQ 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.aerosus mitochondrial cytochrome b gene, 5' end. ACCESSION M35707 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.aerosus (MVZ catalog # 172870) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon aerosus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon aerosus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 115 a 108 c 58 g 120 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg ttaatcactc atttattgac 61 ctcccaaccc catccaacat ctcatcttga tggaattttg ggtcactact aggtgtatgc 121 ctaataatcc aaattctgac tggactattc ctagccatac actacacatc agacacaacc 181 acagcattct cttcagtcgc ccacatttgc cgagatgtaa attacgggtg attaatccgc 241 taccttcacg ctaacggagc ctccatattc tttatctgcc tttttatcca cgtaggtcga 301 ggaatctact acggctccta tgtcctttca gaaacctgaa acatcggtat catcctgttc 361 cttacaacta tagcaacagc atttgtagga tatgtactac c // LOCUS AKOMTCYTBR 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.aerosus mitochondrial cytochrome b gene, 5' end. ACCESSION M35708 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.aerosus (MVZ catalog # 172871) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon aerosus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon aerosus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 116 a 108 c 57 g 120 t ORIGIN 1 atgaaaattt tacggaaaaa tcacccgcta cttaaaattg ttaatcactc atttattgac 61 ctcccaaccc catccaacat ctcatcttga tggaattttg ggtcactact aggtgtatgc 121 ctaataatcc aaattctgac tggactattc ctagccatac actacacacc agacacaacc 181 acagcattct cttcagtcgc ccacatttgc cgagatgtaa attacgggtg attaatccgc 241 tatcttcacg ctaacggagc ctccatattc tttatctgcc tttttatcca cgtaggtcga 301 ggaatctact acggctccta tgtcctttca gaaacctgaa acatcggtat catcctattc 361 cttacaacta tagcaacagc atttgtagga tatgtactac c // LOCUS AKOMTCYTBW 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.jelskii mitochondrial cytochrome b gene, 5' end. ACCESSION M35716 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.jelskii (MVZ catalog # 173084) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon jelskii Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon jelskii. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 109 a 117 c 55 g 117 t 3 others ORIGIN 1 atggcaatta tacgaaaaac ccacccctta cttaaaatta ttaaccactc attcattgat 61 ctacctaccc cctgcaatat ttcttcttga tggaacttcg gctcactcct aggcatttgc 121 ctaattattc aaattctaac tggccttttc ctagcaatac actacacatc cgacacagcc 181 acagcattct cctccgttac ccacatctgc cgagatgtaa actacggctg actcatccgc 241 taccttcatg ctaacggagc atcyatattt tttatttgyc tattyattca cgtaggacga 301 ggaatctact atggctccta catgctctca gagacctgaa acatcggaat cattctactc 361 ctggccacaa tagccacagc attcgtagga tacgttcttc c // LOCUS AKOMTCYTBX 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.jelskii mitochondrial cytochrome b gene, 5' end. ACCESSION M35715 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.jelskii (MVZ catalog # 173083) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon jelskii Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon jelskii. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 107 a 118 c 57 g 119 t ORIGIN 1 atggcaatta tacgaaaaac ccacccctta cttaaaatta ttaaccactc attcattgat 61 ctacctaccc cctgcaatat ttcttcttga tggaacttcg gctcactcct aggcatttgc 121 ctaattattc aaatcctaac tggccttttc ctagcaatac actacacatc cgacacagcc 181 acagcattct cctccgttac ccacatctgc cgagatgtaa actacggctg actcatccgc 241 taccttcatg ctaacggggc atctatattt tttatttgtc tatttattca cgtaggacgg 301 ggaatctact atggctccta catgctctca gagacctgaa acatcggaat cattctactc 361 ctggccacaa tagccacagc attcgtagga tacgttcttc c // LOCUS AKOMTCYTBY 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.jelskii mitochondrial cytochrome b gene, 5' end. ACCESSION M35714 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.jelskii (MVZ catalog # 173073 and 173074) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon jelskii Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon jelskii. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 103 a 121 c 60 g 117 t ORIGIN 1 atggcaatta tacgaaagac ccacccctta cttaaaatca ttaaccactc gttcattgat 61 ctacctaccc cctgcaatat ttcttcttga tggaacttcg gctcactcct aggcatttgc 121 ctaattattc aaattctaac tggccttttc ctagccatac actacacatc cgacacagcc 181 acagcattct cctccgtcac ccacatctgc cgagatgtaa attacggctg actcatccgc 241 tatcttcatg ctaacggagc atccatattt tttatttgcc tattcattca cgtggggcga 301 gggatctact atggctccta catgctctca gagacctgaa acatcggaat tgttctactc 361 ctgaccacaa tagccacagc attcgtagga tacgttctcc c // LOCUS AKOMTCYTBZ 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION A.andinus mitochondrial cytochrome b gene, 5' end. ACCESSION M35713 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE A.andinus (MVZ catalog # 174062 and 174063) liver mitochondrial DNA. ORGANISM Mitochondrion Akodon andinus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Akodon andinus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 112 a 115 c 55 g 119 t ORIGIN 1 atgacaatca tacgaaaaac ccacccttta cttaaaatca ttaatcactc atttattgac 61 ctacccgccc cctccaacat ctcatcctga tggaacttcg gctcactcct tggcatttgc 121 ttgataattc aaattttaac gggccttttc ctagccatac attatacgtc cgacacagct 181 acagcattct cctccgtcac ccatatctgc cgagatgtaa attacggatg actaatccgc 241 tacttacacg ccaatggagc atctatattc tttatctgca tatttattca tgtgggacga 301 ggaatttact acggctccta catactctca gaaacctgaa acatcggaat tattctactc 361 ctgaccacaa tagccacagc atttgtaggc tatgtccttc c // LOCUS BOMMTCYTBA 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION B.amoenus mitochondrial cytochrome b gene, 5' end. ACCESSION M35711 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE B.amoenus (MVZ catalog # 172878) liver mitochondrial DNA. ORGANISM Mitochondrion Bolomys amoenus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Bolomys amoenus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 122 a 107 c 50 g 122 t ORIGIN 1 atgaaaatta ttcgaaaaaa tcacccacta cttaaaatta ttaaccattc attcattgat 61 cttccaaccc catctaacat ttcatcctga tgaaacttcg gatccttact aggcatctgc 121 ctaataatcc aaatcctaac aggcctattt ctagcaatac actatacatc agatacaacc 181 acagcattct cctcagtcgc ccatatctgc cgagacgtga actatggatg attaatccgc 241 tacctacacg ccaacggagc ctccatattc ttcatctgtc ttttcatcca tgtaggccga 301 ggaatttact atggctccta tgtcctatca gaaacctgaa atattggtat tatcctattt 361 tttacaacta tagcaacagc attcgtagga tatgtccttc c // LOCUS BOMMTCYTBB 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION B.amoenus mitochondrial cytochrome b gene, 5' end. ACCESSION M35712 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE B.amoenus (MVZ catalog # 172879) liver mitochondrial DNA. ORGANISM Mitochondrion Bolomys amoenus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Bolomys amoenus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 122 a 106 c 50 g 123 t ORIGIN 1 atgaaaatta ttcgaaaaaa tcacccacta cttaaaatta ttaaccattc attcattgat 61 cttccaaccc catctaacat ttcatcctga tgaaacttcg gatccttact aggcatctgc 121 ctaataatcc aaatcctaac aggcctattt ctagcaatac actatacatc agatacaacc 181 acagcattct cctcagtcgc ccatatctgc cgagacgtga actatggatg attaatccgc 241 tacctacacg ccaacggagc ctccatattc ttcatctgtc ttttcattca tgtaggccga 301 ggaatttact atggctccta tgtcctatca gaaacctgaa atattggtat tatcctattt 361 tttacaacta tagcaacagc attcgtagga tatgtccttc c // LOCUS MCXMTCYTBA 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION M.mimus mitochondrial cytochrome b gene, 5' end. ACCESSION M35709 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE M.mimus (MVZ catalog # 171745 and 171746) liver mitochondrial DNA. ORGANISM Mitochondrion Microxus mimus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Microxus mimus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 118 a 116 c 54 g 113 t ORIGIN 1 atgaaaatcc tacgaaaaaa ccacccgcta cttaaaattg ttaaccactc atttattgac 61 ctaccaaccc catctaacat ctcttcctga tgaaattttg gatccttact aggtgcatgc 121 ctaataatcc aaattctaac cggcctattc ctagccatac actatacatc agacacaacc 181 acagcattct cttcagtagc ccacatttgc cgagatgtaa actacggatg attaatccgc 241 tatctacacg ctaacggagc ctctatattc tttatctgcc tcttcattca cgtaggccga 301 ggaatttact acggctccta tgccctttca gagacctgaa acattggcat catcctattc 361 cttacaacta tagcaacagc attcgtaggg tacgtactcc c // LOCUS MCXMTCYTBB 401 bp ds-DNA ORG 02-AUG-1990 DEFINITION M.mimus mitochondrial cytochrome b gene, 5' end. ACCESSION M35710 KEYWORDS cytochrome b; mitochondrial DNA. SOURCE M.mimus (MVZ catalog # 171752 and 171753) liver mitochondrial DNA. ORGANISM Mitochondrion Microxus mimus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Hesperomyini; Microxus mimus. REFERENCE 1 (bases 1 to 401) AUTHORS Smith,M.F. and Patton,J.L. TITLE Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae) JOURNAL Mol. Biol. Evol. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.F.Smith, 28-JUN-1990. FEATURES from to/span description pept 1 > 401 cytochrome b BASE COUNT 116 a 116 c 56 g 113 t ORIGIN 1 atgaaaatcc tacgaaaaaa ccacccgcta cttaaaattg ttaaccactc atttattgac 61 ctaccaaccc catctaacat ctcttcctga tgaaattttg gatccttact aggtgcatgc 121 ctaataatcc aaattctaac cggcctattc ctagccatac actatacgtc agacacaacc 181 acagcattct cttcagtagc ccacatttgc cgagatgtaa actacggatg attaatccgc 241 tatctgcacg ctaacggagc ctctatattc tttatctgcc tcttcattca cgtaggccga 301 ggaatttact acggctccta tgccctttca gagacctgaa acattggcat catcctattc 361 cttacaacta tagcaacagc attcgtaggg tacgtactcc c // LOCUS CRCIGHA 482 bp ds-DNA VRT 02-AUG-1990 DEFINITION Caiman Ig germline heavy-chain gene V region, exons 1 and 2. ACCESSION M34918 KEYWORDS germline; immunoglobulin heavy-chain; variable region. SOURCE Caiman DNA. ORGANISM Caiman crocodylus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Reptilia; Archosauria; Crocodylia; Crocodylidae; Alligatorinae. REFERENCE 1 (bases 1 to 482) AUTHORS Litman,G.W., Berger,L., Murphy,K., Litman,R., Podlaski,F., Hinds,K., Jahn,C.L., Dingerkus,G. and Erickson,B.W. TITLE Phylogenetic diversification of immunoglobulin V-H genes JOURNAL Dev. Comp. Immunol. 8, 499-514 (1984) STANDARD simple staff_review FEATURES from to/span description pept 1 46 Ig H-chain V region precursor, exon 1 137 / 441 Ig H-chain V region precursor, exon 2 sigp 1 46 Ig H-chain V region signal peptide 137 147 Ig H-chain V region signal peptide matp 148 / 441 Ig H-chain V region, exon 2 IVS 47 136 Ig H-chain V region intron A signal 444 450 heptamer recombination signal signal 474 482 nonamer recombination signal BASE COUNT 104 a 139 c 131 g 108 t ORIGIN 1 atgggacttg ggctccacct gctcgtcctg gccgcagctc tgcaaggtat gtcatcttcc 61 cacaggtcgg ggagggaatc attgcactga tgctgcccta atactagatc ctcttggatc 121 ctaccttgct tttcaggtgc ttggtcccag gtgcagctgg tggagtccgg aggagatgtg 181 aggaaacctg gaaactcttt gcgcctctcc tgcaaagcct cggggttcac cttcggtggc 241 tacggcatgt tctgggtccg ccaggctcct gggaaggggc tggactgggt ggctacaatt 301 aatactgatg gatccagcca gtggtactcc ccggccgttc aggggaaatt caccatctcc 361 agaggcaact cccagaacat gctgtacctg cagatgagca gcctcacacc tgaggacaca 421 gccacgtatt actgcgccag agacacagtg actcaaaccc tattcacggc aatacaaaat 481 cc // LOCUS MUSIGKACZ 203 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse Ig rearranged kappa-chain gene V-J region, partial cds. ACCESSION M35640 KEYWORDS immunoglobulin light-chain; joining exon; kappa-immunoglobulin; processed gene; variable region. SOURCE Mouse (strain BALB/c) DNA, clone 1. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 203) AUTHORS Nishi,M., Kataoka,T. and Honjo,T. TITLE Preferential rearrangement of the immunoglobulin kappa-chain joining region J-kappa-1 and J-kappa-2 segments in mouse spleen DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6399-6403 (1985) STANDARD simple staff_review FEATURES from to/span description pept / 9 > 203 Ig kappa-chain V-J region (AA at 9) recomb 181 182 V-region end/J-region start BASE COUNT 45 a 57 c 50 g 50 t 1 others ORIGIN 1 ggtaccngca gaagtcagat gcctccccca aactatggat ttattacaca tccaacctgg 61 ctcctggagt cccagctcgc ttcagtggca gtgggtctgg gaactcttat tctctcacaa 121 tcagcagcat ggagggtgaa gatgctgcca cttattactg ccagcagttt actagttccc 181 catggacgtt cggtggaggc acc // LOCUS MUSIGKADA 204 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse Ig rearranged kappa-chain gene V-J region, partial cds. ACCESSION M35641 KEYWORDS immunoglobulin light-chain; joining exon; kappa-immunoglobulin; processed gene; variable region. SOURCE Mouse (strain BALB/c) DNA, clone 2. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 204) AUTHORS Nishi,M., Kataoka,T. and Honjo,T. TITLE Preferential rearrangement of the immunoglobulin kappa-chain joining region J-kappa-1 and J-kappa-2 segments in mouse spleen DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6399-6403 (1985) STANDARD simple staff_review FEATURES from to/span description pept / 9 > 204 Ig kappa-chain V-J region (AA at 9) recomb 181 182 V-region end/J-region start BASE COUNT 45 a 58 c 50 g 50 t 1 others ORIGIN 1 ggtaccngca gaagtcagat gcctccccca aactatggat ttattacaca tccaacctgg 61 ctcctggagt cccagctcgc ttcagtggca gtgggtctgg gaactcttat tctctcacaa 121 tcagcagcat ggagggtgaa gatgctgcca cttattactg ccagcagttt actagttccc 181 catcggacgt tcggtggagg cacc // LOCUS MUSIGKADB 203 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse Ig rearranged kappa-chain gene V-J region, partial cds. ACCESSION M35642 KEYWORDS immunoglobulin light-chain; joining exon; kappa-immunoglobulin; processed gene; variable region. SOURCE Mouse (strain BALB/c) DNA, clone 3. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 203) AUTHORS Nishi,M., Kataoka,T. and Honjo,T. TITLE Preferential rearrangement of the immunoglobulin kappa-chain joining region J-kappa-1 and J-kappa-2 segments in mouse spleen DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6399-6403 (1985) STANDARD simple staff_review FEATURES from to/span description pept / 9 > 203 Ig kappa-chain V-J region (AA at 9) recomb 181 182 V-region end/J-region start BASE COUNT 42 a 59 c 53 g 48 t 1 others ORIGIN 1 ggtaccngca gaagccagga tcctcgccca aaccctggat ttatgacaca tccaacctgg 61 cttctggatt ccctgctcgc ttcagtggca gtgggtctgg gacctcttgc tctctcataa 121 tcagcagcat ggaggctgaa gatgctgcca cttattactg ccatcagcgg agtagttacc 181 catggacgtt cggtggaggc acc // LOCUS MUSIGKADC 203 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse Ig rearranged kappa-chain gene V-J region, partial cds. ACCESSION M35643 KEYWORDS immunoglobulin light-chain; joining exon; kappa-immunoglobulin; processed gene; variable region. SOURCE Mouse (strain BALB/c) DNA, clone 4. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 203) AUTHORS Nishi,M., Kataoka,T. and Honjo,T. TITLE Preferential rearrangement of the immunoglobulin kappa-chain joining region J-kappa-1 and J-kappa-2 segments in mouse spleen DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6399-6403 (1985) STANDARD simple staff_review FEATURES from to/span description pept / 9 > 203 Ig kappa-chain V-J region (AA at 9) recomb 181 182 V-region end/J-region start BASE COUNT 47 a 54 c 52 g 50 t ORIGIN 1 ggtaccaaca gaagccaggg cagtctccta aactgctgat atactatgca tccaatcgct 61 acactggagt ccctgatcgc ttcactggca gtggatatgg gacggatttc actttcacca 121 tcagcactgt gcaggctgaa gacctggcag tttatttctg ccagcaggat tatagctctc 181 cgtggacgtt cggtggaggc acc // LOCUS MUSIGKADD 205 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse Ig rearranged kappa-chain gene V-J region, partial cds. ACCESSION M35644 KEYWORDS immunoglobulin light-chain; joining exon; kappa-immunoglobulin; processed gene; variable region. SOURCE Mouse (strain BALB/c) DNA, clone 5. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 205) AUTHORS Nishi,M., Kataoka,T. and Honjo,T. TITLE Preferential rearrangement of the immunoglobulin kappa-chain joining region J-kappa-1 and J-kappa-2 segments in mouse spleen DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6399-6403 (1985) STANDARD simple staff_review FEATURES from to/span description pept / 9 > 205 Ig kappa-chain V-J region (AA at 9) recomb 181 182 V-region end/J-region start BASE COUNT 50 a 55 c 52 g 48 t ORIGIN 1 ggtacctgca caagcctggc cagtctccac agctcctcat ctatgggatt tccaacagat 61 tttctggggt gccagaccgc ttcagtggca gtggttcagg gacagatttc acactcaaga 121 tcagcacaat aaagcctgag gacttgggaa tgtattactg cttacaaggt acacattcag 181 cctccggacg ttcggtggag gcacc // LOCUS MUSIGKADE 203 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse Ig rearranged kappa-chain gene V-J region, partial cds. ACCESSION M35645 KEYWORDS immunoglobulin light-chain; joining exon; kappa-immunoglobulin; processed gene; variable region. SOURCE Mouse (strain BALB/c) DNA, clone 6. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 203) AUTHORS Nishi,M., Kataoka,T. and Honjo,T. TITLE Preferential rearrangement of the immunoglobulin kappa-chain joining region J-kappa-1 and J-kappa-2 segments in mouse spleen DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6399-6403 (1985) STANDARD simple staff_review FEATURES from to/span description pept / 9 > 203 Ig kappa-chain V-J region (AA at 9) BASE COUNT 46 a 51 c 53 g 50 t 3 others ORIGIN 1 ggtaccnnnc gaaaccaggg cagtctccta aactgctgat ttactgggca tccactaggg 61 aatctggggt ccctgatcgc ttcacaggca gtggatctgg gactcatttc actctcacca 121 tcagcagtgt gaaggctgaa gacctggcag tttattactg tcagcaatat tatagctatc 181 cgtggacgtt cggtggaggc acc // LOCUS MUSIGKADF 205 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse Ig rearranged kappa-chain gene V-J region, partial cds. ACCESSION M35646 KEYWORDS immunoglobulin light-chain; joining exon; kappa-immunoglobulin; processed gene; variable region. SOURCE Mouse (strain BALB/c) DNA, clone 1. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 205) AUTHORS Nishi,M., Kataoka,T. and Honjo,T. TITLE Preferential rearrangement of the immunoglobulin kappa-chain joining region J-kappa-1 and J-kappa-2 segments in mouse spleen DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6399-6403 (1985) STANDARD simple staff_review FEATURES from to/span description pept / 9 > 205 Ig kappa-chain V-J region (AA at 9) recomb 181 182 V-region end/J-region start BASE COUNT 46 a 60 c 51 g 42 t 6 others ORIGIN 1 ggtaccnnnn nnaaacagga cagccaccca aactcctcat ctatcttagc atccaaccta 61 gaatctgggg tccctgccag cttcagtggc agtgggtctg ggacaggctt caccctcaac 121 atccatcctg tggaggagtg aggatgctgc aacctattac ttccagcaca gtagggagct 181 tcctcggacg ttcggtggag gcacc // LOCUS MUSPROTCP 912 bp ss-mRNA ROD 02-AUG-1990 DEFINITION Mouse proteoglycan core protein mRNA, complete cds. ACCESSION M34603 KEYWORDS proteoglycan core protein. SOURCE Mouse (strain C57B1/6, haplotype H-2b) T-lymphocyte cell line EL4.E1, cDNA to mRNA, clone 154. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 912) AUTHORS Elliott,J.F., Pohajdak,B., Talbot,D., Miller,C.L., Helgason,C.D., Bleackley,R.C. and Paetkau,V.H. TITLE Cloning and characterization of an inducible proteoglycan core protein mRNA from a mouse T-lymphocyte cell line JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by V.H.Paetkau, 29-MAY-1990. FEATURES from to/span description pept 43 501 proteoglycan core protein precursor sigp 43 117 proteoglycan core protein signal peptide matp 265 498 proteoglycan core protein BASE COUNT 252 a 200 c 194 g 266 t ORIGIN 1 gatttgctaa tccagaggct gagtggagcc gagctggtca ggatgcaggt tcccgtcggc 61 agcaggcttg tcctggctct cgccttcgtc ctggtttggg gatcttcagt gcaaggttat 121 cctgctcgga gagccaggta ccagtgggtc cgctgcaaac cgaatggctt ttttgctaac 181 tgcatcgagg agaagggacc acagtttgac ctaatagatg aatccaataa catcggccct 241 cccatgaata atcctgtttt gatggaagga ccctcaaaag atttcatctc caattatgat 301 gactatgggt caggttcggg ctccggctct ggctccggct ctggctcggg ttccggctcc 361 ggaagtggct tcctaggtga catggaatgg gaataccagc caacagatga aagcaatatt 421 gtctatttca actataagcc ttttgacagg attctcactg agcaaaacca agaccaacca 481 gaagacgatt ttattatatg aatgtgacgg tctctgtctc cccacctcca tgtggaacaa 541 tgtattcagt atacttagtg taccacgttt aaatgaccag tctcaggata aagagtttta 601 cagaaaattt aaaatgcctg gaaaagactc ttgaatcctg ttaccccttt cctcattaac 661 tcgtaaggaa ttatgcttta atgctgttac ctatcttgtt gttctggaaa atgcctgcat 721 ttatgtgtat tgaatcaaca tttaagaaat taacacacac ccccattatt atacaataac 781 tttcaaagcc atactggttt tgaaaatttt aatttgatag caagttgatg aacatctttc 841 atacctaaag tgttcaggac ccaactcgca ttgtggatta caatatattc ctttatgtga 901 taaaagaaat cg // LOCUS PVBENH 316 bp ds-DNA VRL 02-AUG-1990 DEFINITION Papovavirus BKV enhancer/regulatory region. ACCESSION M35737 KEYWORDS . SOURCE Papovavirus BKV (strain BKV-P2, from prototype Gardner ATCCVR 837) DNA, passed in primary human embryonic kidney cells. ORGANISM Papovavirus BKV Viridae; ds-DNA nonenveloped viruses; Papovaviridae; Papillomavirus. REFERENCE 1 (bases 1 to 316) AUTHORS Berg,D.T., Walls,J.D. and Grinnell,B.W. TITLE A variant enhancer/regulatory region from a cloned human prototype BK virus genome JOURNAL Nucleic Acids Res. 16, 9057-9057 (1988) STANDARD simple staff_review FEATURES from to/span description rpt 92 191 tandem repeat copy A rpt 192 290 tandem repeat copy B BASE COUNT 101 a 79 c 85 g 51 t ORIGIN 1 cctcagaaaa agcctccaca cccttactac ttgagagaaa gggtggaggc agaggcggcc 61 tcggcctctt atatattata aaaaaaaagg ccacagggag gagctgctta cccatggaat 121 gcagccaaac catgaccgca ggaaggaaag tgcatgactg ggcagccagc cagtggcagt 181 taataagcag ccagacagac atttgcttac ccatggaatg cagccaaacc atgacctcag 241 gaaggaaagt gcatgactgg gcagccagcc agtggcagtt aataagcagc agccagacag 301 acatgttttg cgagcc // LOCUS HUMCREB 1026 bp ss-mRNA PRI 02-AUG-1990 DEFINITION Human active transcription factor CREB mRNA, complete cds. ACCESSION M34356 KEYWORDS active transcription factor CREB; alternative splicing. SOURCE Human T-cell, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1026) AUTHORS Berkowitz,L.A. and Gilman,M.Z. TITLE Two distinct forms of active transcription factor CREB (cAMP response element binding protein) JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5258-5262 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Z.Gilman, 16-MAY-1990. FEATURES from to/span description pept 1 1026 active transcription factor CREB-B pept 1 261 active transcription factor CREB-A 304 1026 active transcription factor CREB-A BASE COUNT 332 a 249 c 233 g 212 t ORIGIN 1 atgaccatgg aatctggagc cgagaaccag cagagtggag atgcagctgt aacagaagct 61 gaaaaccaac aaatgacagt tcaagcccag ccacagattg ccacattagc ccaggtatct 121 atgccagcag ctcatgcaac atcatctgct cccaccgtaa ctctagtgca gctgcccaat 181 gggcagacag ttcaagtcca tggagtcatt caggcggccc agccatcagt tattcagtct 241 ccacaagtcc aaacagttca gtcttcctgt aaggacttaa aaagactttt ctccggaaca 301 cagatttcaa ctattgcaga aagtgaagat tcacaggagt cagtggatag tgtaactgat 361 tcccaaaagc gaagggaaat tctttcaagg aggccttcct acaggaaaat tttgaatgac 421 ttatcttctg atgcaccagg agtgccaagg attgaagaag agaagtctga agaggagact 481 tcagcacctg ccatcaccac tgtaacggtg ccaactccaa tttaccaaac tagcagtgga 541 cagtatattg ccattaccca gggaggagca atacagctgg ctaacaatgg taccgatggg 601 gtacagggcc tgcaaacatt aaccatgacc aatgcagcag ccactcagcc gggtactacc 661 attctacagt atgcacagac cactgatgga cagcagatct tagtgcccag caaccaagtt 721 gttgttcaag ctgcctctgg agacgtacaa acataccaga ttcgcacagc acccactagc 781 actattgccc ctggagttgt tatggcatcc tccccagcac ttcctacaca gcctgctgaa 841 gaagcagcac gaaagagaga ggtccgtcta atgaagaaca gggaagcagc tcgagagtgt 901 cgtagaaaga agaaagaata tgtgaaatgt ttagaaaaca gagtggcagt gcttgaaaat 961 caaaacaaga cattgattga ggagctaaaa gcacttaagg acctttactg ccacaaatca 1021 gattaa // LOCUS ACNRRDA 1486 bp ss-rRNA RNA 02-AUG-1990 DEFINITION A.lignieresii 16S ribosomal RNA. ACCESSION M35017 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE A.lignieresii (strain ATCC 19393) rRNA. ORGANISM Actinobacillus lignieresii Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Pasteurellaceae. REFERENCE 1 (bases 1 to 1486) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1486 16S ribosomal RNA BASE COUNT 384 a 303 c 448 g 321 t 30 others ORIGIN 1 attnannant ttnatcangg ctcagattna ncgctggcgg caggcttaac acatgcaagt 61 cgaacggtaa cgggaagggn ncttncnttc tttgccgacg agtggcggac gggtgagtaa 121 tgcttgggaa tntggcttat ggagggggat aactacggga aactgtagct aataccgcgt 181 aatatcttag gattaaaggg tgggactttc gggccacctg ccataagatg agcccaagtg 241 ggattaggta gttggttagg taaaggctga ccaagccgac gatctctagc tngtctgaga 301 ggatgaccag ccacactnga actgagacac ggtccagact cctacgggag gcagcagtng 361 ggaatattgc acaatggggg gaaccctnat gcagccatgc cgcgtgaatg aagaaggcct 421 tcgggttgta aagttctttc ggtagcgagg aaggtatcaa atttnataga tttngtaatt 481 gacgttaact acagaagaag caccggctaa ctccgtgcca gcagccgcgg taatacggag 541 ggtgcgagcg ttaatcggaa taactgggcg taaagggcac gcaggcggtt nattaagtga 601 gatgtgaaag ccccgggctt aacctgggna ttgcatttca tactggtcaa ctagagtact 661 ttagggaggg ntagaattcc acgtgtagcg gtgaaatgcg tagagatgtg gaggaatacc 721 gaaggcgaag gcagcccctt gggaatgtac tgacgctcat gtgcgaaagc gtggggagca 781 aacaggatta gataccctgg tagtccacgc tgtaaacgct gtcgatttgg ggattgggct 841 ntnagtctgg tgcccgaagc taacgtgata aatcgaccgc ctggggagta cggccgcaag 901 gttaaaactc aaatgaattg acgggggccg cacaagcggt ggagcatgtg gtttaattcg 961 atgnaacgcg aagaacctta cctactcttg acatccatgg aatcttgtag agatacgaga 1021 gtgccttcgg gaaccatgag acaggtgctg catggctgtc gtcagctcgt gttgtgaaat 1081 gttgggttna gtcccgcaac gagcgcaacc cttatccttt gttgccagcg attnggtcgg 1141 gaactcnaag gagactgccg gtgatnaacc ggaggaaggt ggggatgacg tcaagtcatc 1201 atggccctta cgagtagggc tacacacgtg ctacaatggc gtatacagag ggaagcaaga 1261 tggcgacatg gagcaaatct cacaaagtac gtctaagtcc ggattggagt ctgcaactcg 1321 actccatgaa gtcggaatcg ctagtaatcg caaatcagaa tgttgcggtg aatacgttcc 1381 cgggccttgt acacaccgcc cgtcacacca tgggagtggg ttgtaccaga agtagatagc 1441 ttaaccgcaa ggggggcgtt taccacggta tgattcatga ctnggg // LOCUS BNORRDA 1532 bp ss-rRNA RNA 02-AUG-1990 DEFINITION D.nodosus 16S ribosomal RNA. ACCESSION M35016 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE D.nodosus (strain 198A; ATCC 27521) rRNA. ORGANISM Bacteroides nodosus Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Anaerobic gram-negative straight, curved and helical rods; Bacteroidaceae. REFERENCE 1 (bases 1 to 1532) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1532 16S ribosomal RNA BASE COUNT 410 a 330 c 465 g 324 t 3 others ORIGIN 1 aactgaagag tttgattctg gctcagattg aacgctggcg gcatgcttaa cacatgcaag 61 tcgaacgggg ttatgtagct tgctatgtaa cctagtggcg gacgggtgag taatatatag 121 gaatctgcct tatggtgggg gacaacgtat ggaaacgtac gctaataccg cataagattg 181 aagaatgaaa gcgggggctc gaaagacctc gcgccgtaag atgagcctat atcggattag 241 ctagttggtg gggtaagagc ctaccaaggc gacgatccgt agctggtttg agagaatgat 301 cagccacatc gggactgaga cacggcccna actcctacgg gaggcagcag tggggaatat 361 tggacnatgg ggggaaccct gatccagcaa tgccgcgtgt gtgaagaagg ccttcgggtt 421 gtaaagcact tttattagtg aagaacggtg catggttaat acccatgcaa ttgacattag 481 ctaaggaaaa agcaccggct nactccgtgc cagcagccgc ggtaatacgg agggtgcaag 541 cgttattcgg aatgactggg cgtaaagcgc acgcaggtgg ttttataagt caggtgtgaa 601 atccctgggc tcaacctagg aattgcattt gaaaccgtaa gactagagta tgtcagagga 661 aggcggaatt tccagtgtag cagtgaaatg cgtagatatt ggaaggaaca ccgatggcga 721 aggcagcctt ctggggcaat actgacactc atgtgcgaaa gcgtgggtag caaacaggat 781 tagataccct ggtagtccac gccctaaacg atgtcaacta ggtgttgggt agaaatactc 841 ggtaccgaag ctaacgcaat aagttgaccg cctggggagt acggccgcaa ggttgaaact 901 caaagaaatt gacggggacc cgcacaagcg gtggagcatg tggtttaatt cgatgcaacg 961 cgaagaacct taccaggctt tgacatccag agaattctac agagatgtgg gagtgccttc 1021 gggaactctg agacaggtgt tgcatggctg tcgtcagctc gtgtcgtgag atgttgggtt 1081 aagtcccgca acgagcgcaa cccttatcct tacttgccag cacgtaaagg tgggaactat 1141 aaggagactg ccggtgacaa accggaggaa ggtggggatg acgtcaagtc atcatggccc 1201 ttacagcctg ggctacacac gtgctacaat gggcggtaca gacggtagcc aacccgcgag 1261 ggggagccaa tctgagaaaa ccgttcgtag tccggattgc agtctgcaac tcgactgcat 1321 gaagtcggaa tcgctagtaa tcgcgaatca gcacgtcgcg gtgaatacgt tcccgggtct 1381 tgtacacact gcccgtcaca ccatgggagt ttgttgcacc agaagtaggt agcttaaccg 1441 taaggagggc gcttaccacg gtgtggccga tgactggggt gaagtcgtaa caaggtaacc 1501 gtaggggaac ctgcggttgg atcacctcct tt // LOCUS CAJSAPA 3974 bp ds-DNA BCT 02-AUG-1990 DEFINITION C.fetus surface array protein (sapA) gene, complete cds. ACCESSION J05577 KEYWORDS surface array protein. SOURCE C.fetus fetus DNA. ORGANISM Campylobacter fetus Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Aerobic/microaerophilic, motile, helical/vibrioid bacteria. REFERENCE 1 (bases 1 to 3974) AUTHORS Blaser,M.J. and Gotschlich,E.C. TITLE Surface array protein of Campylobacter fetus: Cloning and gene structure JOURNAL J. Biol. Chem. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.J.Blaser, 01-JUN-1990. FEATURES from to/span description pept 24 2825 surface array protein (sapA) binding 12 15 ribosomal binding site signal 2846 2870 transcription termination signal BASE COUNT 1293 a 641 c 785 g 1255 t ORIGIN 1 ctattttatt aaggagtcct taaatgttaa acaaaacaga tgtttcaatg ctttatatca 61 ctattatggg tatggcaagt gagggtgatg gtaataagta ttggttagat tatgccaata 121 ataatagttt aggagtttca agtttagcta atattatgct tgatagtcca ggggcggcta 181 aattctttgg tgattctctt ttagcaggta atgaaaaaga ttttgttact aagatatata 241 gtatagcttt aggtaatact agtgatgttg atggcattaa ttattggact aaggcaataa 301 ctggcggtgg agaatttact gatagtaagg gtaatgttat tagtgttgct agtttaagca 361 agggtgattt aataggtgct atgattaact ctatggttaa tggcggtagt gctgagtcta 421 aggctatatt tgaggctaag gcagctgcta gtgattactt tgccgatgct actttggtaa 481 gggatattag tggattagat gagggtacta cttctaagtt aattagcgag attaatagtg 541 ctagtgatct tgataaggtt aagagtgaga ttgatgcttt gaagagtgag ctacctaatc 601 cgggtagtac ttatgatctt acagagggta atgataattt aaagggtact gatttagacg 661 atacttttaa tgggactaca tatgtaggta atggtactaa taagagtact cttagtgcat 721 ttgataagac tagatggtcg gtgcttggga gagatacgtt gaatgcgata tttactgcaa 781 taacacgcgc tgcgctacta actgatcaag ctgaattgat aatcactaaa aggcgtacaa 841 acgtagaaaa tatcaatata atttcagatc tagaaacaag tggcgatttc gttttcaacg 901 gttatgaaaa agtaggattt aacgtacttg gcgatatagt tagctttgct accgacgcat 961 ctaaaagcgt aaatgtagaa acaacaggaa cgataactgc tttcaccgca gccggaacag 1021 gcaaagtcga tgttgtcgcc ggtaaaatct ctgcccttac ggccgattcg cgaacaagcg 1081 taaatttaac tgctacaaac gacactatca cattaaccag tgcaaacgct gctactagtg 1141 tgaatttaaa acagcggcag gccaaagacg ctacaataac atccgcaatg cagcaaaaat 1201 ataacaatag acgcaacagg attgcaacta taacttcagc tacggctgta gagaatttga 1261 cagttaaaca tgcaactaac gtagcgctaa atggtggcat ggataaactt gcaacagtta 1321 ctcttgacaa tgctgcttta actgctgcaa tagatataaa atctgcaagc acactaaatt 1381 taataaattc aagtgttaac ggaccaaaac atctctacag cagcaaaaga cgttactgta 1441 aatttaagcg agctgctgct aaggttaaat taaacacaac tgctgctacg gatcaaactg 1501 tgactcttaa agctaatgcc acagacaata gtcttgaatt tgatagcgca actgcaaaaa 1561 ctacgtcagt cactgctagt ggtagtggaa aaactttggt tatcaaaggt gctgaagtag 1621 aaactctagt taatatagac actactgcgt tcaatgcgct gcagagtgtt agcttcggca 1681 aaactggtca aggcggcaaa tttagcgtaa aaacaggtac aggcgatgat aaaatagagt 1741 ttgtaggcac aactttaact gaaggttcag taatcgatgc gccgggtaat gatactatag 1801 ctatgaaatc agctgctttg actagtgcaa atttcactat gatcaaaaac atagagaatg 1861 ttgctattag cgacgcggtg gctacggctg accttagctc ttctgcgttt aaaaactcag 1921 tcatcataac tactaaagag gctgccgata cgactttaac tataaataaa gaccaagtaa 1981 ttaattttac tgcggcagat gcaggctcag ttaagcttat tacagtgaaa ctaaatgatg 2041 taacagcgct aatgattgtt gttaaaatag tattagatgc tgccgctaaa gatactaata 2101 tagctttggg cacagcagca gccgataaag ctcttgtaat tgatacgggt atagaaactc 2161 ttaatatcac ttcgttagtt aaagctacaa gccctgaaac tacagcaaat accgtaaatg 2221 ctaaattgac agatgtaact tctatcatta tagatgggat gcaaattact ttaggtcatg 2281 ccggcactgc tggaactgac tatagtaaag tttctatgat agatgcaagt gctcttaaag 2341 ctggtcttac atttgatgca agtgctataa cattaggagc taatgctact ataaaaggtg 2401 gctctggagc tgatagtata actgttaaag gcggaaatat cgttgtagat ttagttgctg 2461 gcggagacga tactataact cttaaaaaag gtgctgagaa aacagatatt acaaccgtta 2521 ataactttaa tgctggcgat aagatagata tagctgatgc caaaaatggt actttcacat 2581 ttaataaaat tacaatgaat agcgatgcta atttagatga ttatatcact aaagcagtag 2641 caggagacgg atcaacaaac tctgctgtaa gctactcaca taatggatat acttatgtag 2701 tagttgatgg aacagctgga gctactttca ctaaagctac tgatacaatt atcaaacttt 2761 caggtacgct agatcttaaa cttagcggag ataatgttgt agttgatgat ggaagcgtaa 2821 tttaagcaat agtaattgct tgataaaaaa gccttaattt ttaaggcttt taatttgtct 2881 aaatttatct tagcttaggc gtatttattt gaaatctcgt cagacggatc gtcttaaaat 2941 aaggttttat agagacaaag tatattttag accaaacctt aataaatagt agatagtttt 3001 ttgctaagag gagctaggag aactagctcc ttgaatattt ttaaatttat ttgagttgta 3061 ttttaaattc aacatatctg ttttttgatg ttttgatcga aatttgtcta ttgtatccat 3121 cctaaaaatt tcagctcttc aactcttttt gtgtgaaatt gttctaataa ggttgataaa 3181 ttttcatatt tgtcacttgg aacaagaaaa ctctcgtctc cgactctttt caccaatttt 3241 tgtttataaa actttaaatt taaaggtttt ataagatcta tatatgaact aaactcatct 3301 ttatagctat tagctatact aaaagcgatc tgcttgaact ctttgaaatc aacgtttaaa 3361 attttacaaa gcggcttaaa atcgtttagc ctaatgtttt gacgcttacc gtttataggt 3421 aaatagctct caaatccttt tgccgtacta taaaatcccg ctgctcatca cgtgcataca 3481 taggcgcatc agcactatat ctccgcttgt tataagagaa agatttttca gcatgcagat 3541 cttccgtatt ttatgataac gctataaaca tatatcttca aaagctcctt cttttcagta 3601 tctgatagta gctctttgct tatgcgctta aaaagctttt cgctggttgt gtcatattta 3661 tttatactag tagtcctaga tacgaggcaa actcgacgac gttataatga tgattttcta 3721 gtttatcaaa tcttttaatt acgtagtgat actcgtcgtc atctcctgcc actacagcac 3781 ttcacggaac tctgattttc aacgtatttt tagcaaaact caaatgaaga tgctcattta 3841 tcagcgaggt gcggaaaata acttttgaac tggttggatt tgatctgatt ttcgaatatg 3901 gttttaaaat atagtttgaa gcagcgtctt gatggattat ctttcgttca aaatcgatat 3961 ttactaattt tttg // LOCUS CDBRRDA 1470 bp ss-rRNA RNA 02-AUG-1990 DEFINITION C.hominis 16S ribosomal RNA. ACCESSION M35014 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE C.hominis (strain ATCC 16826) rRNA. ORGANISM Cardiobacterium hominis Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods. REFERENCE 1 (bases 1 to 1470) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1470 16S ribosomal RNA BASE COUNT 373 a 331 c 466 g 296 t 4 others ORIGIN 1 actgaagagt ttgattctgg ctcagattga acgctggcgg catgcttaac acatgcaagt 61 cgaacggaaa cgatggagct tgctccaggc gtcgagtggc gaacgggtga gtaacgcatg 121 ggaatctgcc ttttgctggg ggataacgta gggaaactta cgctaatacc gcataacacc 181 taagggtgaa agcgggggac cgaaagcctc gcggcaagag atgagcccat gttggattag 241 ctagttggtg gggtaaaggc ctaccaaggc gacgatccat agctggtctg agaggatgat 301 cagccacact gggactgaga cacggcccag actccnacgg gaggcagcag tggggaatat 361 tggacnatgg ggggaaccct gatccagcaa tgccgcgtgt gtgaagaagg ccttcgggtt 421 gtaaagcact ttcagtaggg aggaaaggtg cgtagttaat acctgcgcaa ttgacgttac 481 ctacagaaga agcaccggct aactccgtgc cagcagccgc ggtaatacgg agggtgcgag 541 cgttattcgg aattactggg cgtaaagcgc acgcaggcgg ttgcccaagt cagatgtgaa 601 agccccgggc ttaacctggg aactgcattt gaaactgggc gactagagta tgaaagagga 661 aagcggaatt tccagtgtag cagtgaaatg cgtagatatt ggaaggaaca ccgatggcga 721 aggcagcttt ctgggtcgat actgacgctc atgtgcgaaa gcgtggggag caaacaggat 781 tagataccct ggtagtccac gccctaaacg atgtcaacta ggcgtcgggt tgttaaagac 841 tcggtgcngg agctaacgca ttaagttgac cgcctgggga gtacggccgc aaggttgaaa 901 ctcaaagaaa ttgacgggga cccgcncaag cggtggagca tgtggtttaa ttcgatgcaa 961 cgcgaagaac cttaccaggc cttgacatcc taggaacttg gcagagatgc cttggtgcct 1021 tcgggaacct agagacaggt gttgcatggc tgtcgtcagc tcgtgtcgtg agatgttggg 1081 ttaagtcccg caacgagcgc aacccttatc cttacttgcc agcactttgg gtgggaactg 1141 taaggagact gccggtgaca aaccggagga aggtggggat gacgtcaagt catcatggcc 1201 cttacggcct gggctacaca cgtgctacaa tggtcggtac agacggtagc gaagccgcga 1261 ggtggagcca atctgagaaa gccgatcgta gtccggattg cagtctgcaa ctcgactgca 1321 tgaagtcgga atcgctagta atcgcgaatc agcatgtcgc ggtgaatacg ttcccgggtc 1381 ttgtacacac tgcccgtcac accatgggag tttgttgcac cagaagcagg tagcttaact 1441 taggagggcg cttgccacgg tgtggccgat // LOCUS GLARGBA 763 bp ds-DNA INV 02-AUG-1990 DEFINITION G.lamblia 5.8S rRNA gene. ACCESSION M35013 KEYWORDS 5.8S ribosomal RNA; large subunit rRNA; small subunit rRNA. SOURCE G.lamblia DNA, clones B4 and C4. ORGANISM Giardia lamblia Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora; Zoomastigophora; Diplomonadida; Diplomonadina; Hexamitidae. REFERENCE 1 (bases 1 to 763) AUTHORS Edlind,T.D., Sharetzsky,C. and Cha,M.E. TITLE Ribosomal RNA of the primitive eukaryote Giardia lamblia: Large subunit domain I and potential processing signals JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by T.D.Edlind, 04-JUN-1990. FEATURES from to/span description rRNA 177 321 5.8S ribosomal RNA rRNA < 1 146 small subunit ribosomal RNA rRNA 372 > 763 large subunit ribosomal RNA BASE COUNT 121 a 293 c 293 g 56 t ORIGIN 1 gtacacaccg cccgtcgctc ctaccgactg ggcgcggcgg cgagcgcccc ggacgcgcga 61 agggccgcga gcccccgcgc ctggaggaag gagaagtcgt aacaaggtat ccgtaggtga 121 acctgcggat ggatccctcg cgcgccccgc gcgtcgcccc cgcggcccgg tcggcccccg 181 aacgccccgc cggcggatgc ctcggcccgg gcggcgacga agagcgcggc ggagcgcgag 241 acgcggtgcg gacccgcccg ccccgagaag caccgaccct cgaacgcagc gcgccccggc 301 gccgccgcct cggcgcccgc cgcgtgccgc gcgccgcgcc gcagagagcg ccccggggcg 361 gtcccgccgg gctgcgcggc ccgaggcggc gggggcgacg ggcggaactt aagcatatca 421 gtacgccccg gaggagaaac caaccgggat tccccgtagc ggcgagcgac gcgggaggag 481 cccgccccga aggcgcgctg tggggcgcag gcgcaggccc gccgcgaggg ggcccgaggg 541 ccccgcccga gagggtgcaa gccccgtacg gcggccggcg cctgcgcgcg agtagcgctg 601 cttgagcgtg cagcgcggaa gggaggcgcg gcccttccaa ggctaaatac gccccgggac 661 cgatagcgga ccaagtagcg cgagcgaacg gtgaaaagga cgcctgcggc cgctcaaaag 721 acctgaaccg ccgccgcgcc gccggccccg tctcgaaaca cgg // LOCUS HEIRRDA 1472 bp ss-rRNA RNA 02-AUG-1990 DEFINITION H.influenzae 16S ribosomal RNA. ACCESSION M35019 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE H.influenzae (strain ATCC 33391) rRNA. ORGANISM Haemophilus influenzae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Pasteurellaceae. REFERENCE 1 (bases 1 to 1472) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1472 16S ribosomal RNA BASE COUNT 376 a 300 c 459 g 311 t 26 others ORIGIN 1 attgaagagt ttgatcatgg ctcagattga acgctggcgg caggcttaac acatgcaagt 61 cgaacggtag caggagaaag cttgctttct tgctgacgag tggcggacgg gtgagtaatg 121 cttgggaatc tggcttatgg agggggataa cgacgggaaa ctgtcgctaa taccgcgtat 181 tatcggaaga tgaaagtgcg ggactgagag gccgcatgcc ataggangag cccaagtggg 241 attaggtagt tggtggggta aatgcctacc aagcctncga tctctagctg gtctgagang 301 atgaccagcc acactggaac tgagacacgg tccagactcc tacgggaggc agcagtgggg 361 aatattgcgc natgggggga accctgacgc agccatgccg cgtgaatgaa gaaggccttc 421 gggttgtaaa gttctttcgg tattgaggaa ggttgatgtg ttaatagcac atcaaattga 481 cgttaaatac agaagaagca ccggctnact ccgtgccagc agccgcggta atacggaggg 541 tgcgagcgtt aatcggaata actgggcgta aagggcacgc aggcggttat ttaagtgagg 601 tgtgaaagcc ccgggcttaa cctgggnatt gcatttcaga ctgggtaact agagtacttt 661 agggaggggt agaattccac gtgtagcggt gaaatgcgta gagatgtgga ggaataccga 721 aggcgaaggc agccccttgg gaatgtactg acgctcatgt gcgaaagcgt ggggagcaaa 781 caggattaga taccctggta gtccacgctg taaacgctgt cgatttnggg gttggggttn 841 aactctggca cccgtagcta acgtgataaa tcgaccgcct ggggagtacg gccgcaaggt 901 taaaactcaa atgaattgac gggggccngc ncaannggtg gagcatgtgg tttaattcga 961 tgnaacgcga agaaccttac ctactcttga catcctaaga agagctcaga gatgagcttg 1021 tgccttcggg aacttagaga caggtgctgc atggctgtcg tcagctcgtg ttgtgaaatg 1081 ttgggttnag tcccgcaacg agcgcaaccc ttatcctttg ttgccagcga cttggtcggg 1141 aactcaaagg agactgccag tgataaactg gaggaaggtn gggatgacgt caagtcatca 1201 tggcccttac gagtagggct acacacgtgc tacaatggcg tatacagagg gaagcgaagc 1261 tgcgaggtgg agcgaatctc ataaagtacg tctaagtccg gattggagtc tgcaactcga 1321 ctccatgaag tcggaatcgc tagtaatcgc gaatcagaat gtcgcggtga atacgttccc 1381 gggccttgta cacaccgccc gtcacaccnt gggagtgggt tgtaccagaa gtagatagct 1441 naacctnnnn gagggcgtnn ncnacggtan ga // LOCUS HUMIBSUB 3110 bp ss-mRNA PRI 02-AUG-1990 DEFINITION Human integrin beta-5 subunit mRNA, complete cds. ACCESSION M35011 KEYWORDS integrin. SOURCE Human placenta, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 3110) AUTHORS Suzuki,S., Huang Z,-S. and Tanihara,H. TITLE Cloning of an integrin beta subunit exhibiting high homology with integrin beta-3 subunit JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5354-5358 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.Suzuki, 05-JUN-1990. FEATURES from to/span description pept 30 2420 integrin beta-5 subunit BASE COUNT 726 a 809 c 887 g 688 t ORIGIN 1 cgcgccgccg ctgagggagg cgccccacca tgccgcgggc cccggcgccg ctgtacgcct 61 gcctcctggg gctctgcgcg ctcctgcccc ggctcgcagg tctcaacata tgcactagtg 121 gaagtgccac ctcatgtgaa gaatgtctgc taatccaccc aaaatgtgcc tggtgctcca 181 aagaggactt cggaagccca cggtccatca cctctcggtg tgatctgagg gcaaaccttg 241 tcaaaaatgg ctgtggaggt gagatagaga gcccagccag cagcttccat gtcctgagga 301 gcctgcccct cagcagcaag ggttcgggct ctgcaggctg ggacgtcatt cagatgacac 361 cacaggagat tgccgtgaac ctccggcccg gtgacaagac caccttccag ctacaggttc 421 gccaggtgga ggactatcct gtggacctgt actacctgat ggacctctcc ctgtccatga 481 aggatgactt ggacaatatc cggagcctgg gcaccaaact cgcggaggag atgaggaagc 541 tcaccagcaa cttccggttg ggatttgggt cttttgttga taaggacatc tctcctttct 601 cctacgcggc accgaggtac cagaccaatc cgtgcattgg ttacaagttg tttccaaatt 661 gcgtcccctc ctttgggttc cgccatctgc tgcctctcac agacagagtg gacagcttca 721 atgaggaagt tcggaaacag agggtgtccc ggaaccgaga tgcccctgag gggggctttg 781 atgcagtact ccaggcagcc gtctgcaagg agaagattgg ctggcgaaag gatgcactgc 841 atttgctggt gttcacaaca gatgatgtgc cccacatcgc attggatgga aaattgggag 901 gcctggtgca gccacacgat ggccagtgcc acctgaacga ggccaacgag tacactgcat 961 ccaaccagat ggactatcca tcccttgcct tgcttggaga gaaattggca gagaacaaca 1021 tcaacctcat ctttgcagtg acaaaaaacc attatatgct gtacaagaat tttacagccc 1081 tgatacctgg aacaacggtg gagattttag atggagactc caaaaatatt attcaactga 1141 ttattaatgc atacaatagt atccggtcta aagtggagtt gtcagtctgg gatcagcctg 1201 aggatcttaa tctcttcttt actgctacct gccaagatgg ggtatcctat cctggtcaga 1261 ggaagtgtga gggtctgaag attggggaca cggcatcttt tgaagtatca ttggaggccc 1321 gaagctgtcc cagcagacac acggagcatg tgtttgccct gcggccggtg ggattccggg 1381 acagcctgga ggtgggggtc acctacaact gcacgtgcgg ctgcagcgtg gggctggaac 1441 ccaacagcgc caggtgcaac gggagcggga cctatgtctg cggcctgtgt gagtgcagcc 1501 ccggctacct gggcaccagg tgcgagtgcc aggatgggga gaaccagagc gtgtaccaga 1561 acctgtgccg ggaggcagag ggcaagccac tgtgcagcgg gcgtggggac tgcagctgca 1621 accagtgctc ctgcttcgag agcgagtttg gcaagatcta tgggcctttc tgtgagtgcg 1681 acaacttctc ctgtgccagg aacaagggag tcctctgctc aggccatggc gagtgtcact 1741 gcggggaatg caagtgccat gcaggttaca tcggggacaa ctgtaactgc tcgacagaca 1801 tcagcacatg ccggggcaga gatggccaga tctgcagcga gcgtgggcac tgtctctgtg 1861 ggcagtgcca atgcacggag ccgggggcct ttggggagat gtgtgagaag tgccccacct 1921 gcccggatgc atgcagcacc aagagagatt gcgtcgagtg cctgctgctc cactctggga 1981 aacctgacaa ccagacctgc cacagcctat gcagggatga ggtgatcaca tgggtggaca 2041 ccatcgtgaa agatgaccag gaggctgtgc tatgtttcta caaaaccgcc aaggactgcg 2101 tcatgatgtt cacctatgtg gagctcccca gtgggaagtc caacctgacc gtcctcaggg 2161 agccagagtg tggaaacacc cccaacgcca tgaccatcct cctggctgtg gtcggtagca 2221 tcctccttgt tgggcttgca ctcctggcta tctggaagct gcttgtcacc atccacgacc 2281 ggagggagtt tgcaaagttt cagagcgagc gatccagggc ccgctatgaa atggcttcaa 2341 atccattata cagaaagcct atctccacgc acactgtgga cttcaccttc aacaaatcct 2401 acaatggcac tgtggactga tgtttccttc tccgaggggc tggagcgggg atctgatgaa 2461 aaggatcaga ctgaaacgcc ttgcacggct gctcggcttg atcacagctc cctaggtagg 2521 caccacagag aagaccttct agtgagcctg ggccaggagc ccacagtgcc tgtacaggaa 2581 ggtgcctggc catgtcacct ggctgctagg ccagagccat gccaggctgc gtccctccga 2641 gcttgggata aagcaagggg accttggcgc tctcagcttt ccctgccaca tccagcttgt 2701 tgtcccaatg aaatactgag atgctgggct gtctctccct tccaggaatg ctgggccccc 2761 agcctggcca gacaagaaga ctgtcaggaa gggtcggagt ctgtaaaacc agcatacagt 2821 ttggcttttt tcacattgat catttttata tgaaataaaa agatcctgca tttatggtgt 2881 agttctgagt cctgagactt ttctgcgtga tggctatgcc ttgcacacag gtgttggtga 2941 tggggctgtt gagatgcctg ttgaaggtac atcgtttgca aatgtgagtt tcctctcctg 3001 tccgtgtttg tttagtactt ttataatgaa aagaaacaag attgtttggg attggaagta 3061 aagattaaaa ccaaaagaat ttgtgtttgt ctgataaaaa aaaaaaaaaa // LOCUS KINRRDAA 1474 bp ss-rRNA RNA 02-AUG-1990 DEFINITION K.indologenes 16S ribosomal RNA. ACCESSION M35015 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE K.indologenes (strain ATCC 25869) rRNA. ORGANISM Kingella indologenes Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1474) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1474 16S ribosomal RNA BASE COUNT 375 a 322 c 451 g 315 t 11 others ORIGIN 1 ttgaactgaa gagtttgatt ctggctcaga ttgaacgctg gcggcatgct taacacatgc 61 aagtcgaacg agggaagcag cttgctgcng acctngtggc ggacgggtga gtaacgtata 121 ggaatctacc ttggggtggg ggataacgta tggaaacgta cgctaatacc acataacact 181 tacgagtcaa agcgggggat cttcggacct cgcgccctta gatgagccta tattggatta 241 gctagttggt rgggtaaagg cctaccaagg cgacgatcca tagctggttt gagaggatga 301 tcagccacat cgggactgag acacggcccn nactcctacg ggaggcagca gtggggaata 361 ttggncnatg ggggcaaccc tgatccagca atgccgcgtg tgtgaagaag gccttngggt 421 tgtaaagcac tttcgttagt gaagaaaggt ttatggttaa tacctgtgaa tttgacatta 481 gctaaagaag aagcaccggc taactccgtg ccagcagccg cggtaatacg gagggtgcna 541 gcgttattcg gaatgactgg gcgtaaagcg cacgcaggcg gttatttaag tcagatgtga 601 aagccccggg cttaacctgg gnattgcatt tgaaactggg taactagagt atgtgagagg 661 aaggcggaat ttccagtgta gcagtgaaat gcgtagagat tggaaggaac accgatggcg 721 aaggcagcct tctggggcaa tactgacgct catgtgcgaa agcgtgggta gcaaacagga 781 ttagataccc tggtagtcca cgccctaaac gatgtcaact aggtgttggg cacttaagtg 841 ctcggtaccg cagctaacgc attaagttga ccgcctgggg agtacggccg caaggttgaa 901 actcaaagaa attgacgggg acccgcacaa gcggtggagc atgtggttta attcgatgca 961 acgcgaagaa ccttaccagg ccttgacatc cagagaagtt accagagatg gtttcgtgcc 1021 ttcgggaact ctgagacagg tgttgcatgg ctgtcgtcag ctcgtgtcgt gagatgttgg 1081 gttaagtccc gcaacgagcg caacccttat ccttacttgc cagcacttcg ggtgggaact 1141 ataaggagac tgccggtgac aaaccggagg aaggtgggga tgacgtcaag tcatcatggc 1201 ccttacggcc tgggctacac acgtgctaca atggtcggta cagacggttg ccaacccgcg 1261 agggggagct aatctgagaa agccgatcgt agtccggatt gcactctgca actcgagtgc 1321 atgaagtcgg aatcgctagt aatcgcgaat cagaacgtcg cggtgaatac gttcccgggt 1381 cttgtacaca ctgcccgtca caccatggga gtgggttgca ccagaagtag ctagcttatc 1441 agggcggtta ccacggtgtg attcangact aggg // LOCUS MUSTNFBG 3219 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse tumor necrosis factor-beta (lymphotoxin) gene. ACCESSION Y00137 KEYWORDS lymphotoxin; signal peptide; tumor necrosis factor. SOURCE Mouse DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 3219) AUTHORS Gray,P.W., Chen,E., Tang,W.-L. and Ruddle,N. TITLE The murine tumor necrosis factor-beta (lymphotoxin) gene sequence JOURNAL Nucleic Acids Res. 15, 3937-3937 (1987) STANDARD simple automatic REFERENCE 2 (sites for [1]) AUTHORS Fashena,S.J., Tang,W.-L., Sarr,T. and Ruddle,N.H. TITLE The murine lymphotoxin gene promoter: Characterization and negative regulation JOURNAL J. Immunol. 145, 177-183 (1990) STANDARD simple staff_entry FEATURES from to/span description pept 1632 1727 lymphotoxin precursor, exon 2 (first expressed exon) 1811 1910 lymphotoxin precursor, exon 3 2135 2547 lymphotoxin precursor, exon 4 sigp 1632 1727 lymphotoxin signal peptide 1811 1813 lymphotoxin signal peptide matp 1814 1910 lymphotoxin 2135 2547 lymphotoxin pre-msg 685 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 857 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 865 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 1114 3121 lymphotoxin mRNA and introns (minor alt.) pre-msg 1179 3121 lymphotoxin mRNA and introns (major alt.) IVS 1286 1622 put. intron I IVS 1728 1810 intron II IVS 1911 2134 intron III signal 1153 1158 put. TATA-box BASE COUNT 724 a 971 c 744 g 780 t ORIGIN 1 tgaaagctcc ctctgtacag agcattggaa gcctggggtg tacatttggg gttacatgat 61 cttggggttc taagagaata cccccaaatc atcttccaga cctggaacat tctaggacag 121 ggttctcaac cttcctaact ccatgaccct ttaatacagt tcctcatgtt gtggtgaccc 181 caaccataca attattttcg ttgctatttc ataactgtaa tttcgctgct attatgaaca 241 taatgtaaat atttgtttta aatagaggtt tgccaaagag accttgccac aggttgagac 301 tgccgctcca gagagtaagg gacacattaa aattgttaca caccagatcc cccaaatttg 361 gggagagggc actgtaatgg aacttcttga cattaaactg gcagataaac tggcagaaaa 421 aaaaaaaaaa aagctgggca gtggtggcac acacctttaa tcccagcact tgggaggcag 481 aggcaggcgg atttctgagt tctaggccag cctggtcgac agagtgagtt tcaggacagc 541 cagggctaca cagagaaacc ctgtctcgaa aaaagcaaaa aaaaaaaaaa aaaactggca 601 gatgaccaga aaatacagat atattggaat aactgtgact tgaaccccca aagacaagag 661 aggaaatagg cctgaagggg cggcaggcat gtcaagcatc cagagccctg ggttcgaacc 721 tgaaaaaaca aaggtgccgc taaccacatg tggcttcgga gccctccaga catgaccatg 781 atcgacagag agggaaatgt gcagagaagc ctgtgagcag tcaagggtgc agaagtgata 841 taaaccatca ctcttcaggg aaccaggctt ccagtcacag cccagctgta ccctctccac 901 gaattgctcg gccgttcact ggaactcctg ggcctgaccc agctccctgc tagtccctgc 961 ggcccacagt tccccggacc cgactccctt tcccagaacg cagtagtcta agcccttagc 1021 ctgcggttct ctcctaggcc ccagcctttc ctgccttcga ctgaaacagc agcatcttct 1081 aagcctgggg cttccccaag ccccagcccc gacctagaac ccgcccgctg cctgccacac 1141 tgccgcttcc tctataaagg gacccgacgc cagcgcccag gaccccgcac agcaggtgag 1201 cctctcctac cctgtctcct tgggcttacc ctggtatcag gcatccctca ggatccccag 1261 ccttaatggg tctggtcctc ctgtcgtggc tttgattttt ggtctgttcc tgtggcggcc 1321 ttatcagtct ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct 1381 ctctctctct ctctttctct ctctctgcct ctgttagcca ttgtctgttt ctatggtgga 1441 gctttcctct tcccctctgt ctctccttat ccctgctcac ttcagggttc ccctgcctgt 1501 ccccttttct gtctgtcgcc ctgtctctca gggtggctgt ctcagctggg aggtaaggtc 1561 tgtcttcctc tgtgtgcccc gcctccgcta cacacacaca ctctctctct ctctctcagc 1621 aggttctcca catgacactg ctcggccgtc tccacctctt gagggtgctt ggcacccctc 1681 ctgtcttcct cctggggctg ctgctggccc tgcctctagg ggcccaggtg aggcagcaag 1741 agattggggg tgctggggtg gcctagctaa ctcagagtcc tagagtcctc tccactctct 1801 tctgtcccag ggactctctg gtgtccgctt ctccgctgcc aggacagccc atccactccc 1861 tcagaagcac ttgacccatg gcatcctgaa acctgctgct caccttgttg gtaaacttct 1921 gcctccagag gagaggtcca gtccctgcct tttgtcctac ttgcccaggg gcccaggcga 1981 tcttcccatc tccccacacc aacttttctt accctaaggg caggcacccc actcccaatc 2041 tccctaccaa ccatcccact tgtccagtgc ctgctcctca gggatgggga cctctgatct 2101 tgatagcccc ccaatgtctt gtgcctcttc ccagggtacc ccagcaagca gaactcactg 2161 ctctggagag caagcacgga tcgtgccttt ctccgacatg gcttctcttt gagcaacaac 2221 tccctcctga tccccaccag tggcctctac tttgtctact cccaggtggt tttctctgga 2281 gaaagctgct cccccagggc cattcccact cccatctacc tggcacacga ggtccagctc 2341 ttttcctccc aatacccctt ccatgtgcct ctcctcagtg cgcagaagtc tgtgtatccg 2401 ggacttcaag gaccgtgggt gcgctcaatg taccaggggg ctgtgttcct gctcagtaag 2461 ggagaccagc tgtccaccca caccgacggc atctcccatc tacacttcag ccccagcagt 2521 gtattctttg gagcctttgc actgtagatt ctaaagaaac ccaagaattg gattccaggc 2581 ctccatcctg accgttgttt caagggtcac atccccacag tctccagcct tccccactaa 2641 aataacctgg agctctcacg ggagtctgag acacttcagg ggactacatc ttccccaggg 2701 ccactccaga tgctcagggg acgactcaag cctacctaga agttcctgca cagagcaggg 2761 tttttgtggg tctaggtcgg acagagacct ggacatgaag gagggacaga catgggagag 2821 gtggctggga acaggggaag gttgactatt tatggagaga aaagttaagt tatttattta 2881 tagagaatag aaagagggga aaaatagaaa gccgtcagat gacaactagg tcccagacac 2941 aaaggtgtct cacctcagac aggacccatc taagagagag atggcgagag aattagatgt 3001 gggtgaccaa ggggttctag aagaaagcac gaagctctaa aagccagcca ctgcttggct 3061 agacatccac agggaccccc tgcaccatct gtgaaaccca ataaacctct tttctctgag 3121 attctgtctg cttgtgtctg tcttgcgttg ggggagaaac ttcctggtct ctttaaggag 3181 tggagcaggg gacagaggcc tcagttggcc atgggatcc // LOCUS NGORRDAA 1478 bp ss-rRNA RNA 02-AUG-1990 DEFINITION N.denitrificans 16S ribosomal RNA. ACCESSION M35020 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE N.denitrificans (strain ATCC 14686) rRNA. ORGANISM Neisseria denitrificans Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1478) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1478 16S ribosomal RNA BASE COUNT 380 a 331 c 448 g 308 t 11 others ORIGIN 1 aacataagag tttgatcctg gctcagattg aacgctggcg gcatgcttta cacatgcaag 61 tcgaacggca gcggagaagt gcttgcactt ctgccggcga gtggcgaacg ggtgagtaac 121 atattggaac gtaccgagta atgggggata actaatcgaa agattagcta ataccgcata 181 cgtcctgagg gagaaagcgg gggatcttcg gacctcgcgt tattcgagcg gccaatatct 241 gattagctag ttggtggggt aaaggcctac caaggcgacg atcagtagcg ggtctgagag 301 gatgatccgc cacactggga ctgagacacg gcccagactc ctacgggagg cagcagtggg 361 gaattttgga cgatgggcgc aagcctgatc cagccatgcc gcgtgtatga agaaggcctt 421 cgggttgtaa agtacttttg tnngggaaga aaagggattt gctaataccg aatcctcatg 481 acggtacctn aagaataagc accggctaac tacgtgccag nanccgcggn natacgtagg 541 gtgcgagcgt taatcggaat tactgggcgt aaagcgagcg cagacggtta cttaagcagg 601 atgtgaaatc cccgagctca acttgggaac tgcgttctga actgggtagc tagagtatgt 661 cngagggggg tagaattcca cgtgtagcag tgaaatgcgt agagatgtgg aggaataccg 721 atggcgaagg cagccccctg ggataatact gacgttcatg ctcgaaagcg tgggtagcaa 781 acaggattag ataccctggt agtccacgcc ctaaacgatg tcgattagct gttggggtac 841 ttgatacctt agtagcgtag ctaacgcgtg aaattgaccg cctggggagt acggtcgcaa 901 gattaaaact caaaggaatt gacggggacc cgcacaagcg gtggatgatg tggattaatt 961 cgatgcaacg cgaagaacct tacctggtct tgacatgtac ggaatctccc agagacggga 1021 gngtgccttc gggagccgta acacaggtgc tgcatggctg tcgtcagctc gtgtcgtgag 1081 atgttgggtt aagtcccgca acgagcgcaa cccttgtcat tagttgccat cattcagttg 1141 ggcactctaa tgagactgcc ggtgacaaac cggaggaagg tggggatgac gtcaagtcct 1201 catggccctt atgaccaggg cttcacacgt catacaatgg tcggtacaga gggtagccaa 1261 gccgcgaggt ggagccaatc tcacaaaacc gatcgtagtc cggattgcac tctgcaactc 1321 gagtgcatga agtcggaatc gctagtaatc gcaggtcagc atactgcggt gaatacgttc 1381 ccgggtcttg tacacaccgc ccgtcacacc ntgggagtgg gggataccag aagtaggtag 1441 ggtaaccgca aggagcccnc ttaccacggt atacttca // LOCUS PASRRDA 1481 bp ss-rRNA RNA 02-AUG-1990 DEFINITION P.multocida 16S ribosomal RNA. ACCESSION M35018 KEYWORDS 16S ribosomal RNA; ribosomal RNA. SOURCE P.multocida (strain NCTC 10322) rRNA. ORGANISM Pasteurella multocida Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Pasteurellaceae. REFERENCE 1 (bases 1 to 1481) AUTHORS Dewhirst,F.E., Paster,B.J., La Fontaine,S. and Rood,J.I. TITLE Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. nov.; and assignment of the genera Cardiobacterium, Dichelobacter and Suttonella to Cardiobacteriaceae fam. nov. in the gamma division of Proteobacteria based upon 16S ribosomal ribonucleic acid sequence JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by F.E.Dewhirst, 05-JUN-1990. Author address: F.E.Dewhirst Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1481 16S ribosomal RNA BASE COUNT 374 a 305 c 459 g 321 t 22 others ORIGIN 1 attgnagagt ttgancangg ctcagattga ncgctggcgg caggcttaac acatgcaagt 61 cgaacggtag caggaagaaa gcttnctttc tttgctgacg agtggcggac gggtgagtaa 121 tgcttgggna tctggcttat ggagggggat aactgtggga aactgcagct aataccgcgt 181 attctcttag gaggaaaggg tgggaccttn gggccacctg ccataagatg agcccaagtg 241 ggattaggta gttggtgggg taaaggccta ccaagcctnc gatctctagc tngtctgaga 301 ggatgaccag ccacactgga actgagacac ggtccagact cctacgggag gcagcagtgg 361 ggaatattgc gcaatggggg gaaccctgac gcagccatgc cgcgtgaatg aagaaggcct 421 tcgggttgta aagttctttc ggtnatgagg aagggatgtt nttaaataga tagcatcatt 481 gacgttaatt ncagaagaag caccggctna ctccgtgcca gcagccgcgg taatacggag 541 ggtgcgagcg ttaatcggaa taactgggcg taaagggcac gcaggcggac ttttaagtga 601 gatgtgaaat ccccgagctt aacttgggaa ctgcatttca gactgggagt ctagagtnct 661 ttagggaggg ntagaattcc acgtgtagcg gtgaaatgcg tagagatgtg gaggaatacc 721 gaaggcgaag gcagcccctt gggaatgtac tgacgctcat gtgcnaaagc gtggggagca 781 aacaggatta gataccctgg tagtccacgc tgtaaacgct gtcgatttgg ggattgggct 841 ntntgcttgg tgcccgaagc taacgtgata aatcgaccgc ctggggagta cggccgcaag 901 gttaaaactc aaatgaattg acgggggccg cacaagcggt ggagcatgtg gtttaattcg 961 atgnaacgcg aagaacctta cctactcttg acatcctaag aagagctcag agatgagctt 1021 gtgccttcgg gaacttagag acaggtgctg catggctgtc gtcagctcgt gttgtgaaat 1081 gttgggttaa gtcccgcaac gagcgcaacc cttatccttt gttgccagcg attcggtcgg 1141 gaactcaaag gagactgcca gtgannaact ggaggaaggt ggggatgacg tcaagtcatc 1201 atggccctta cgagtagggc tacacacgtg ctacaatggt gcatacagag ggcagcgaga 1261 gtgcgagctt gagcgaatct cagaaagtgc atctaagtcc ggattggagt ctgcaactcg 1321 actccatgaa gtcggaatcg ctagtaatcg caaatcagaa tgttgcggtg aatacgttcc 1381 cgggccttgt acacaccgcc cgtcacacca tgggagtggg ttgtaccaga agtagatagc 1441 ttaaccntcg ggggggcgtt taccacggta tgattcatga c // LOCUS RATSUBB 1124 bp ss-mRNA ROD 02-AUG-1990 DEFINITION Rat F-0-ATPase subunit b mRNA, complete cds. ACCESSION M35052 KEYWORDS F-0-ATPase subunit b. SOURCE Rat (strain Wistar) liver, cDNA to mRNA. ORGANISM Rattus rattus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1124) AUTHORS Tsurumi,C., Yoshihara,Y., Osaka,F., Yamada,F., Tani,I., Higuti,T., Shimizu,M., Oeda,K., Ohkawa,H., Toda,H., Kakuno,T., Sakiyama,F., Kumatori,A., Tanaka,K. and Ichihara,A. TITLE cDNA cloning and sequencing for the import precursor of subunit b in H+-ATP synthase from rat mitochondria JOURNAL Biochem. Biophys. Res. Commun. 169, 136-142 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by T.Higuti, 04-JUN-1990. FEATURES from to/span description pept 60 830 F-0-ATPase subunit b precursor sigp 60 185 F-0-ATPase subunit b signal peptide matp 186 827 F-0-ATPase subunit b signal 1106 1111 poly-A signal BASE COUNT 323 a 241 c 266 g 294 t ORIGIN 1 gagtgtctcg ggtcggggtc acagggacat cggtaccgct gtctggatct tcgcagacaa 61 tgctgtcccg ggtggtactt tctgccgccg ccacagcggc cccgtgtctg aagaacgcgg 121 ccgtcctggg tccaggggtt ttacaggcaa caagggtctt tcacacagga cagcctcgcc 181 ttgcccctct accacctctt cctgaatatg gaggaaaagt acgtcttggg ctgattcctg 241 aggaattttt ccagttcctt taccctaaga ctggtgtaac aggaccctac gtgcttggaa 301 ctgggcttag cttgtacttt ctatccaaag aaatatatgt gattacccca gagaccttct 361 ctaccatatc agtagtaggg ttgattgtct atgtgattaa gaaatatggc gcctctattg 421 gagaatttat tgacaaactt aatgaggaaa aaattgctca actagaagaa ataaagcagt 481 caagcatgaa gcaaatccag gatgcaatca acagggagaa ggcacagcag gcactggttc 541 agaagcgcca ctacctcttc gatgttcaga ggaataacat tgccctggcc ttggaggtca 601 cttaccggga acgactacat aaagcatata aggaggtaaa gaatcgcctg gactaccata 661 tttctgtaca ggacatgatg cgtcgcaagg agggagagca catgataaac tgggtggaga 721 agcatgtgat acagagcatt tctgcacagc aggaaaagga gaccattgcc aagtgcatcg 781 gagatctaaa gatgcttgca aagaaggctc aagctcagcc aattatgtga atgtgtctat 841 ctcagttgtg atagccagag agggttaact taaatgagaa ctactctact tgaagaactc 901 tttctgtatt gctgtctaat gaaattgtgg tgtacctttc ctaagaaatg atcaaggtcc 961 atttagtggc ttaaccctat ttctgatcct tgctctgtat tcggagttgt ctgatcacat 1021 ttgagtaagc aatttgcagc aactcgctgc ccaacagaaa ttaccaagtt atagtttaaa 1081 cttgtaatta gttaaaacat cttacaataa aatgtttgaa acag // LOCUS RATHDNFNT 1020 bp ss-mRNA ROD 02-AUG-1990 DEFINITION Rat neurotrophin-3 (HDNF/NT-3) mRNA, complete cds. ACCESSION M34643 KEYWORDS neurotrophic factor; neurotrophin-3. SOURCE Rat adult (strain Sprague-Dawley) hippocampus, cDNA to mRNA. ORGANISM Rattus rattus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1020) AUTHORS Ernfors,P., Ibanez,C.F., Ebendal,T., Olson,L. and Persson,H. TITLE Molecular cloning and neurotrophic activities of a protein with structural similarities to nerve growth factor: Developmental and topographical expression in the brain JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5454-5458 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by P.P.Ernfors, 18-MAY-1990. FEATURES from to/span description pept 73 849 neurotrophin-3 (HDNF/NT-3) precursor sigp 73 120 neurotrophic factor/neurotrophin-3 (HDNF/NT-3) signal peptide matp 490 846 neurotrophic factor/neurotrophin-3 BASE COUNT 320 a 229 c 226 g 245 t ORIGIN 1 gtcgacgtcc ctggaaatag tcatacggat gccatggtta cttctgccac gatcttacag 61 gtgaacaagg tgatgtccat cttgttttat gtgatatttc ttgcttatct ccgtggcatc 121 caaggcaaca acatggatca aaggagtttg ccagaagact ctctcaattc cctcattatc 181 aagttgatcc aggcggatat cttgaaaaac aagctctcca agcagatggt agatgttaag 241 gaaaattacc agagcaccct gcccaaagca gaggcaccca gagaaccaga gcagggagag 301 gccaccaggt cagaattcca gccgatgatt gcaacagaca cagaactact acggcaacag 361 agacgctaca attcaccccg ggtcctgctg agtgacagca cccctttgga gccccctccc 421 ttatatctaa tggaagatta tgtgggcaac ccggtggtaa ccaatagaac atcaccacgg 481 aggaaacgct atgcagagca taagagtcac cgaggagagt actcagtgtg tgacagtgag 541 agcctgtggg tgaccgacaa gtcctcagcc attgacattc ggggacacca ggttacagtg 601 ttgggagaga tcaaaaccgg caactctcct gtgaaacaat atttttatga aacgaggtgt 661 aaagaagcca ggccagtcaa aaacggttgc agggggattg atgacaaaca ctggaactct 721 cagtgcaaaa cgtcgcaaac ctacgtccga gcactgactt cagaaaacaa caaactcgta 781 ggctggcgct ggatacgaat agacacttcc tgtgtgtgtg ccttgtcaag aaaaatcgga 841 agaacatgaa ttggcatctg tccccacata taaattatta ctttaaatta tatgatatgc 901 atgtagcata taaatgttta tattgttttt atatattata agttgacctt tatttattaa 961 acttcagcaa cccttacagt atataagctt ttttcataat cgggctgctc aaaaaaaaaa // LOCUS NEMG12 3620 bp ds-DNA INV 02-AUG-1990 DEFINITION A.lumbricoides trans-spliced mRNA encoded protein gene 12, complete cds. ACCESSION M33757 KEYWORDS . SOURCE A.lumbricoides suum DNA, clone gene-12. ORGANISM Ascaris lumbricoides Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Rhabditia; Ascaridida; Ascaridina; Ascaridoidea; Ascarididae. REFERENCE 1 (bases 1 to 3620) AUTHORS Denker,J.A. and Nilsen,T.W. TITLE Trans splicing of nematode pre-mRNA in in vitro JOURNAL Unpublished (1990) STANDARD full staff_review REFERENCE 2 (bases 886 to 1149) AUTHORS Hannon,G.J., Maroney,P.A., Denker,J.A. and Nilsen,T.W. TITLE Trans splicing of nematode pre-messenger RNA in vitro JOURNAL Cell 61, 1247-1255 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by T.W.Nilsen, 18-APR-1990. [1] Author address: T.W.Nilsen, Case Western Reserve University, Department of Molecular Biology and Microbiology School of Medicine, 2119 Abbington Rd., Cleveland OH, 44106, Ph: (216) 368-3913, FAX: 216-368-3055. FEATURES from to/span description pept 995 1190 gene-12 encoded protein, exon 1 1860 1945 gene-12 encoded protein, exon 2 2280 2432 gene-12 encoded protein, exon 3 2947 2997 gene-12 encoded protein, exon 4 pre-msg < 1 3210 gene-12 mRNA (alt.) pre-msg < 1 3114 gene-12 mRNA (alt.) IVS 1191 1859 gene-12 intron A IVS 1946 2279 gene-12 intron B IVS 2433 2946 gene-12 intron C signal 3097 3102 poly-A signal BASE COUNT 942 a 722 c 867 g 1080 t 9 others ORIGIN 1 bp upstream of EcoRI site. 1 gaattcgagc acactctggc ctctttcagt tgtttcatgg caaggcgcat acgattttct 61 aaacgcgctt gagtttttgt atgtgcataa ctgtgccaac actgccgagg atattcgtgc 121 gctttttgct tgttcttttc cacaaacagc aagtaatgtt gtaaaatacg ccctgtcata 181 atcattggca tcttcctttg atgtcgacga actggtcacc gatggcttct ttactttgcc 241 tctgctcatt cttacccaca ttgtccactt acctgttgac cgtgtttcgg caaccagtgc 301 agtcagatgg tctctatacg cgacgcagca ctcgtcccag tcgtcttcaa gagcaacttt 361 agcgaagatt ttgaatcccg cgggagagcc gtttcctgtt cgacggtgac agagctattg 421 tagagggata tcatcgaaat ctaggtcctc ttgagtgcga atcctctgca aacaggtaac 481 tctagactcc tggcaaaaaa tgagttgatt ctaccaattt tttagttagc agcagttggt 541 tgggacgagc ttgcatgctt cgttcggttg aggaacttta ctgcagttcc gtcagccatg 601 ttgcctttcg gattctgttt ttccgacatc atggctacag gtggcactga agacgacgtt 661 atatttgaca caccttgcac gtcataatgt gtatccgcat tgtgctggtc ggatatcgct 721 gcagcaatta ttgaggaggt atttggtcat ctgggttcat ttgaaacggc gtgcattatg 781 ggaacaagtg gtacgcagtc gttcacgcgc tcctctgatt agttacagaa gtggatgcgt 841 gtccggtctt ttccctcatc ttcttaaccc ttttctttta gaatgtattc aaatgcatgg 901 ttttgtttgg tggttgtatc gaaaatttac gccatgagac actagtgcat tatttaatag 961 tagtaaaaga gatgtttttt tagtatattg aaggatgtca tacgacttgg caacggctga 1021 aagagcagcg tatgctcctt tcttcggcta tatgggagca gcttctgcac agatcttcac 1081 agtgcttggg gctgcgtacg gcactgcgaa atcggccgtt ggaatctcat caatgggagt 1141 gatgaggccg gagctgatca tgaaatccgt tattcctgtc atcatggccg gtcagtgttt 1201 cccgttattc ccactttgat accactgttc agctttacgt ggtgtgatat cggagcatcg 1261 cccagagcag catattactt tattttttga aagggagcat ggcaagaggt tgacgaaagg 1321 caaggaatat ttactgcttc taacttactg aattcatcac tgccaattct ttttgtttta 1381 tatctgactt tcttagagct gaagatgttg tttcaattaa ggtggttgtc gaaatgctgt 1441 aatcgttacc tgttgctgtc tgaaatttgg cttgtacatc cattattctg agattctttt 1501 gtataatttt ccactaactg ggatcaaaac ggacttttat aaatatttgt cggtaactaa 1561 gagtgatttc catttagagt atggaaaaca aagtagggca tctcgcatat ctcatctctt 1621 gcctctggac tgtcacatat tttctttcat ccccaaagaa aggtccggaa tacttggaga 1681 tgatcgtcaa tgggtgatta ttgcctcaag gcatatgaga agtgtgcata aatggaattg 1741 cttaatttgg tgctgtttga tggattctgt ttatgatttg acatattcgg acagatattc 1801 gggtaacata aaagtatttt tattgacaca agctggtcat gaatttacgt gcgttgcagg 1861 tattatcggc atttatgggc ttgttgttgc gatggtttta agagggaagg tgacttccgc 1921 tagcgcagga tacaccctcg acaaagtaag accatttgtt gctctattct cgcaagccca 1981 ccactgtttt cgctgttctt catctgcacg aattttcttt tggtgcataa tgtcttctgc 2041 tgcatcatct attgcgactc aaagaaagga cttcagcttt tctaaccttt cctgcgtaaa 2101 tcatggaaag tcggggggat tgggagggcg ataggtggag ggggagggag cggggaactg 2161 caaagagaga agtgggacta agtaaacatg atgcggagcg agtcgaccta agattgccta 2221 aaggtgattt tatattgagt agtgttttta gaggcggtca ttaacgaggt ccgtttcagg 2281 gatttgccca cctggctgct ggccttacat gtggtctttg cggtctcggt gccggatacg 2341 caatcggaat cgttggagat gcgggtgtca ggggaacagc acagcaaccg cgcttgttcg 2401 tcggcatgat cctcattctt atcttctccg aggtactttt ccgctacttg gttaanctgt 2461 tggaattggt cgatggaatc agcgcgtctt agaatgacta gactgattta aagtggccgg 2521 atatacctca gtgggtttgg tgctcgtctg gctgagttta gagggaggaa gacttctccg 2581 ctgttcctgg attcttattt gaacagtcta agagtttatt cccagaactt ccnnnnaaga 2641 ctaggtagnn aaggggggag agtgggannt aggaaggccg cgaccctaga atgtacaaag 2701 gaaggtcgat ccctcaatga cgattcgcac ttagaggagt gcacataaga cttacgagaa 2761 tttacgatgg caccggaaaa aaggtagaag tcataaggtt gttgaccaga tggttactac 2821 accagcattg tcgcagtcag tcccggaggt gctcatataa agagaaaaca ccagaacaaa 2881 aataacaaca ttgagatgta gtagtcttca catatttctg tcgctggtga tttgaaaatc 2941 gttcaggtac tcggtctata cggaatgatt gtcgcgctca ttcttggcac ctcatagacg 3001 acgggcataa tcggtggctg tacaacaact gtgaaatggc gccgggaggg ttgccaataa 3061 tgttccacta aatgttatac actactgctg catataaata aaagctgctc cgcgaaaatg 3121 ctgagtttaa gtggctgcaa cacattttgg tgctgagatg tcgtcttaac tgcaagtttt 3181 ttgacggaga caatgaagta ttttatgtgc aattattcat gtaacgtcga tgcatttaca 3241 gtcatatgca aatgatctgc gtgaatgtcg cactgtgaac cacaaccaca gaaaaacgaa 3301 gtggatctat catgactgca tttacgacta aaacagatcg gtgcacaaag caagtgaaac 3361 ttagccaagg taaaattaac acagttcttt ctctcaaaca aacatgaagt aaacacatca 3421 cagaaacatc caaactgcct cgaaagtggt tgtagcgcta taacagcaag agatacgaaa 3481 agaataaaag aacccgcatt tatacgataa gcgtatttaa atgcgctttc acgcaacgat 3541 gcaaaaggaa aggctgttgg ctattgtatt gccttcgaga aacaattgac ttagagcaat 3601 gccatattgg cgtctgaacg // LOCUS HUMPPPB1A 3215 bp ss-mRNA PRI 02-AUG-1990 DEFINITION Human protein phosphotyrosyl phosphatase 1B (PTP1B) mRNA, complete cds. ACCESSION M33689 KEYWORDS protein phosphotyrosyl phosphatase. SOURCE Human placenta, cDNA to mRNA, (library of Clontech), clone lambda-16-1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 3215) AUTHORS Brown-Shimer,S., Johnson,K.A., Lawrence,J.B., Johnson,C., Bruskin,A., Green,N.R. and Hill,D.E. TITLE Molecular cloning and chromosome mapping of the human gene encoding protein phosphotyrosyl phosphatase 1B JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5148-5152 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.E.Hill, 13-APR-1990. FEATURES from to/span description pept 73 1380 protein phosphotyrosyl phosphatase 1B (EC 3.1.3.48) BASE COUNT 818 a 828 c 801 g 768 t ORIGIN Chromosome 20q13.1-q13.2. 1 gcgcgacgcg gcctagagcg gcagacggcg cagtgggccg agaaggaggc gcagcagccg 61 ccctggcccg tcatggagat ggaaaaggag ttcgagcaga tcgacaagtc cgggagctgg 121 gcggccattt accaggatat ccgacatgaa gccagtgact tcccatgtag agtggccaag 181 cttcctaaga acaaaaaccg aaataggtac agagacgtca gtccctttga ccatagtcgg 241 attaaactac atcaagaaga taatgactat atcaacgcta gtttgataaa aatggaagaa 301 gcccaaagga gttacattct tacccagggc cctttgccta acacatgcgg tcacttttgg 361 gagatggtgt gggagcagaa aagcaggggt gtcgtcatgc tcaacagagt gatggagaaa 421 ggttcgttaa aatgcgcaca atactggcca caaaaagaag aaaaagagat gatctttgaa 481 gacacaaatt tgaaattaac attgatctct gaagatatca agtcatatta tacagtgcga 541 cagctagaat tggaaaacct tacaacccaa gaaactcgag agatcttaca tttccactat 601 accacatggc ctgactttgg agtccctgaa tcaccagcct cattcttgaa ctttcttttc 661 aaagtccgag agtcagggtc actcagcccg gagcacgggc ccgttgtggt gcactgcagt 721 gcaggcatcg gcaggtctgg aaccttctgt ctggctgata cctgcctctt gctgatggac 781 aagaggaaag acccttcttc cgttgatatc aagaaagtgc tgttagaaat gaggaagttt 841 cggatggggc tgatccagac agccgaccag ctgcgcttct cctacctggc tgtgatcgaa 901 ggtgccaaat tcatcatggg ggactcttcc gtgcaggatc agtggaagga gctttcccac 961 gaggacctgg agcccccacc cgagcatatc cccccacctc cccggccacc caaacgaatc 1021 ctggagccac acaatgggaa atgcagggag ttcttcccaa atcaccagtg ggtgaaggaa 1081 gagacccagg aggataaaga ctgccccatc aaggaagaaa aaggaagccc cttaaatgcc 1141 gcaccctacg gcatcgaaag catgagtcaa gacactgaag ttagaagtcg ggtcgtgggg 1201 ggaagtcttc gaggtgccca ggctgcctcc ccagccaaag gggagccgtc actgcccgag 1261 aaggacgagg accatgcact gagttactgg aagcccttcc tggtcaacat gtgcgtggct 1321 acggtcctca cggccggcgc ttacctctgc tacaggttcc tgttcaacag caacacatag 1381 cctgaccctc ctccactcca cctccaccca ctgtccgcct ctgcccgcag agcccacgcc 1441 cgactagcag gcatgccgcg gtaggtaagg gccgccggac cgcgtagaga gccgggcccc 1501 ggacggacgt tggttctgca ctaaaaccca tcttccccgg atgtgtgtct cacccctcat 1561 ccttttactt tttgcccctt ccactttgag taccaaatcc acaagccatt ttttgaggag 1621 agtgaaagag agtaccatgc tggcggcgca gagggaaggg gcctacaccc gtcttggggc 1681 tcgccccacc cagggctccc tcctggagca tcccaggcgg gcggcacgcc agacagcccc 1741 ccccttgaat ctgcagggag caactctcca ctccatattt atttaaacaa ttttttcccc 1801 aaaggcatcc atagtgcact agcattttct tgaaccaata atgtattaaa attttttgat 1861 gtcagccttg catcaagggc tttatcaaaa agtacaataa taaatcctca ggtagtactg 1921 ggaatggaag gctttgccat gggcctgctg cgtcagacca gtactgggaa ggaggacggt 1981 tgtaagcagt tgttatttag tgatattgtg ggtaacgtga gaagatagaa caatgctata 2041 atatataatg aacacgtggg tatttaataa gaaacatgat gtgagattac tttgtcccgc 2101 ttattctgct ccctgttatc tgctagatct agttctcaat cactgctccc ccgtgtgtat 2161 tagaatgcat gtaaggtctt cttgtgtcct gatgaaaaat atgtgcttga aatgagaaac 2221 tttgatctct gcttactaat gtgccccatg tccaagtcca acctgcctgt gcatgacctg 2281 atcattacat ggctgtggtt cctaagcctg ttgctgaagt cattgtcgct cagcaatagg 2341 gtgcagtttt ccaggaatag gcatttgcct aattcctggc atgacactct agtgacttcc 2401 tggtgaggcc cagcctgtcc tggtacagca gggtcttgct gtaactcaga cattccaagg 2461 gtatgggaag ccatattcac acctcacgct ctggacatga tttagggaag cagggacacc 2521 ccccgccccc cacctttggg atcagcctcc gccattccaa gtcgacactc ttcttgagca 2581 gaccgtgatt tggaagagag gcacctgctg gaaaccacac ttcttgaaac agcctgggtg 2641 acggtccttt aggcagcctg ccgccgtctc tgtcccggtt caccttgccg agagaggcgc 2701 gtctgcccca ccctcaaacc ctgtggggcc tgatggtgct cacgactctt cctgcaaagg 2761 gaactgaaga cctccacatt aagtggcttt ttaacatgaa aaacacggca gctgtagctc 2821 ccgagctact ctcttgccag cattttcaca ttttgccttt ctcgtggtag aagccagtac 2881 agagaaattc tgtggtggga acattcgagg tgtcaccctg cagagctatg gtgaggtgtg 2941 gataaggctt aggtgccagg ctgtaagcat tctgagctgg cttgttgttt ttaagtcctg 3001 tatatgtatg tagtagtttg ggtgtgtata tatagtagca tttcaaaatg gacgtactgg 3061 tttaacctcc tatccttgga gagcagctgg ctctccacct tgttacacat tatgttagag 3121 aggtagcgag ctgctctgct atgtccttaa gccaatattt actcatcagg tcattatttt 3181 ttacaatggc catggaataa accattttta caaaa // LOCUS HUMPPPB1A1 276 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human protein phosphotyrosyl phosphatase 1B (PTP1B) gene, exon x. ACCESSION M33688 KEYWORDS protein phosphotyrosyl phosphatase. SEGMENT 1 of 5 SOURCE Human DNA, (library of Clontech), clone lambda-10-2. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 276) AUTHORS Brown-Shimer,S., Johnson,K.A., Lawrence,J.B., Johnson,C., Bruskin,A., Green,N.R. and Hill,D.E. TITLE Molecular cloning and chromosome mapping of the human gene encoding protein phosphotyrosyl phosphatase 1B JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5148-5152 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.E.Hill, 13-APR-1990. FEATURES from to/span description pept / 34 + 243 protein phosphotyrosyl phosphatase 1B, exon x (EC 3.1.3.48) (AA at 34) pre-msg < 1 > 276 PTP1B mRNA and introns IVS < 1 33 PTP1B intron x-1 IVS 244 > 276 PTP1B intron x BASE COUNT 56 a 77 c 69 g 74 t ORIGIN Chromosome 20q13.1-q13.2. 1 ctttagaatc tactagatga ttttctcttt cagacccaag aaactcgaga gatcttacat 61 ttccactata ccacatggcc tgactttgga gtccctgaat caccagcctc attcttgaac 121 tttcttttca aagtccgaga gtcagggtca ctcagcccgg agcacgggcc cgttgtggtg 181 cactgcagtg caggcatcgg caggtctgga accttctgtc tggctgatac ctgcctcttg 241 ctggtaagga ggcctcgcgg gtgccctggg gagctc // LOCUS HUMPPPB1A2 453 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human protein phosphotyrosyl phosphatase 1B (PTP1B) gene, exon x+1. ACCESSION M33687 KEYWORDS protein phosphotyrosyl phosphatase. SEGMENT 2 of 5 SOURCE Human DNA, (library of Clontech), clone lambda-10-2. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 453) AUTHORS Brown-Shimer,S., Johnson,K.A., Lawrence,J.B., Johnson,C., Bruskin,A., Green,N.R. and Hill,D.E. TITLE Molecular cloning and chromosome mapping of the human gene encoding protein phosphotyrosyl phosphatase 1B JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5148-5152 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.E.Hill, 13-APR-1990. FEATURES from to/span description pept + 236 + 397 protein phosphotyrosyl phosphatase 1B, exon x+1 (EC 3.1.3.48) pre-msg < 1 > 453 PTP1B mRNA and introns IVS < 1 235 PTP1B intron x IVS 398 > 453 PTP1B intron x+1 BASE COUNT 104 a 118 c 111 g 120 t ORIGIN Chromosome 20q13.1-q13.2. 1 ggggaggtcc cagactctta accagatctc ttgtgaatgc attgcctcag ggaggcacca 61 agcctttcat gaggacctgt ccccctgacc cagacacctc ccacccagcc ccacctccaa 121 cactagggat cacatttcag catgagattg ggaggggaca gacatctaac ggtgttatta 181 acgttgccct tgagaattgg acctggctga cttatatctc ctctctggct ttcagatgga 241 caagaggaaa gacccttctt ccgttgatat caagaaagtg ctgttagaaa tgaggaagtt 301 tcggatgggg ctgatccaga cagccgacca gctgcgcttc tcctacctgg ctgtgatcga 361 aggtgccaaa ttcatcatgg gggactcttc cgtgcaggtc agcattgcct ttgtttgaat 421 ccaggtgtga ccattttaac ttttttgtct ttg // LOCUS HUMPPPB1A3 426 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human protein phosphotyrosyl phosphatase 1B (PTP1B) gene, exon x+2. ACCESSION M33686 KEYWORDS protein phosphotyrosyl phosphatase. SEGMENT 3 of 5 SOURCE Human DNA, (library of Clontech), clone lambda-10-2. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 426) AUTHORS Brown-Shimer,S., Johnson,K.A., Lawrence,J.B., Johnson,C., Bruskin,A., Green,N.R. and Hill,D.E. TITLE Molecular cloning and chromosome mapping of the human gene encoding protein phosphotyrosyl phosphatase 1B JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5148-5152 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.E.Hill, 13-APR-1990. FEATURES from to/span description pept + 46 + 269 protein phosphotyrosyl phosphatase 1B, exon x+2 (EC 3.1.3.48) pre-msg < 1 > 426 PTP1B mRNA and introns IVS < 1 45 PTP1B intron x+1 IVS 270 > 426 PTP1B intron x+2 BASE COUNT 115 a 122 c 109 g 80 t ORIGIN Chromosome 20q13.1-q13.2. 1 gaagtgaaca ctaatagact tccttcctct tgctgctctt tcaaggatca gtggaaggag 61 ctttcccacg aggacctgga gcccccaccc gagcatatcc ccccacctcc ccggccaccc 121 aaacgaatcc tggagccaca caatgggaaa tgcagggagt tcttcccaaa tcaccagtgg 181 gtgaaggaag agacccagga ggataaagac tgccccatca aggaagaaaa aggaagcccc 241 ttaaatgccg caccctacgg catcgaaagg taatatattg ggtccagctt gttggggtga 301 ggggaaatga cttctgttct agaaacacac gctggtactg aaaccctgtg atgcagcctc 361 tgttggcaag cagcgcttcg catccttggg aacagggcgc tggaccaaca cccactccac 421 tggtgg // LOCUS HUMPPPB1A4 732 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human protein phosphotyrosyl phosphatase 1B (PTP1B) gene, exon x+3. ACCESSION M33685 KEYWORDS protein phosphotyrosyl phosphatase. SEGMENT 4 of 5 SOURCE Human DNA, (library of Clontech), clone lambda-10-2. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 732) AUTHORS Brown-Shimer,S., Johnson,K.A., Lawrence,J.B., Johnson,C., Bruskin,A., Green,N.R. and Hill,D.E. TITLE Molecular cloning and chromosome mapping of the human gene encoding protein phosphotyrosyl phosphatase 1B JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5148-5152 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.E.Hill, 13-APR-1990. FEATURES from to/span description pept + 402 + 597 protein phosphotyrosyl phosphatase 1B, exon x+3 (EC 3.1.3.48) pre-msg < 1 > 732 PTP1B mRNA and introns IVS < 1 401 PTP1B intron x+2 IVS 598 > 732 PTP1B intron x+3 BASE COUNT 164 a 193 c 205 g 170 t ORIGIN Chromosome 20q13.1-q13.2. 1 tctgtagctc taaagaatga gatctggtgt actgatgtgg ccagacattg caattgcagt 61 acatgagaag gcaaatcata cagtagtgtg tacaccagtg agtcctccag ccagataaat 121 cctcacagtg accagtcgcc caggcacctt gtgaacccta ccctgggtgt gggtgctatc 181 tgaagtacct gggggagggg gtgacaagtg gacttcaggc tgatgtggcc ctggcctggc 241 cctccctcca agcagagggg gctggcacgc tggaaggtta acatcatcca actctgtcta 301 cacgtggctt gttttttcct agaattcctg ccacaatagc agcatccttg ccattcattt 361 tctccaaagt gagtacccat ctctgccctc tgattcctca gcatgagtca agacactgaa 421 gttagaagtc gggtcgtggg gggaagtctt cgaggtgccc aggctgcctc cccagccaaa 481 ggggagccgt cactgcccga gaaggacgag gaccatgcac tgagttactg gaagcccttc 541 ctggtcaaca tgtgcgtggc tacggtcctc acggccggcg cttacctctg ctacagggta 601 tgtttccact gacagacgcg ctgggcagat gctcgtgtgc agagagcact ggccgctagc 661 ccgatggtag gattcagttc tgtggtgcat ctgagccagt ctcagaagaa acagatcaag 721 gttttaagtc tg // LOCUS HUMPPPB1A5 365 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human protein phosphotyrosyl phosphatase 1B (PTP1B) gene, exon x+4. ACCESSION M33684 KEYWORDS protein phosphotyrosyl phosphatase. SEGMENT 5 of 5 SOURCE Human DNA, (library of Clontech), clone lambda-10-2. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 365) AUTHORS Brown-Shimer,S., Johnson,K.A., Lawrence,J.B., Johnson,C., Bruskin,A., Green,N.R. and Hill,D.E. TITLE Molecular cloning and chromosome mapping of the human gene encoding protein phosphotyrosyl phosphatase 1B JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 5148-5152 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.E.Hill, 13-APR-1990. FEATURES from to/span description pept + 266 289 protein phosphotyrosyl phosphatase 1B, exon x+4 (EC 3.1.3.48) pre-msg < 1 > 365 PTP1B mRNA and introns IVS < 1 265 PTP1B intron x+3 BASE COUNT 80 a 101 c 88 g 96 t ORIGIN Chromosome 20q13.1-q13.2. 1 tacctcctaa gacttttacg gttttaaata ttttacctct ttccaggtgg catctgagta 61 catcagatgg ttttgcaaaa tgcaaacaat tttttccttg gggatgattt ttggggagag 121 ggggctactg taaaaaataa aaccaaaacc ccctttgctc cctcggaggt tgaagttgcc 181 ggggggtgtg gccggggtca tgcatgaggc gacagcactg caggtgcggg tctgggctca 241 tctgaactgt ttggtttcat tccagttcct gttcaacagc aacacatagc ctgaccctcc 301 tccactccac ctccacccac tgtccgcctc tgcccgcaga gcccacgccc gactagcagg 361 catgc // LOCUS YSCIRA2A 9859 bp ds-DNA PLN 02-AUG-1990 DEFINITION S.cerevisiae IRA2 protein gene, complete cds. ACCESSION M33779 KEYWORDS IRA2 protein. SOURCE S.cerevisiae DNA. ORGANISM Saccharomyces cerevisiae Unclassified. REFERENCE 1 (bases 1 to 9859) AUTHORS Tanaka,K., Nakafuku,N.M., Tamanoi,F., Kagiro,Y., Matsumoto,K. and Toh-i,A. TITLE IRA2, a second gene of Saccharomyces cerevisiae that encodes a protein with a domain homologous to mammalian ras GTPase activating protein JOURNAL Mol. Cell. Biol. 10, 4303-4313 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by K.Tanaka, 19-APR-1990, for release after publication. University of Chicago Dept. of Biochem and Mol Biol 920 E. 58th Street Chicago, IL 60637 FEATURES from to/span description pept 231 9470 IRA2 protein (IRA2) BASE COUNT 3163 a 1908 c 1735 g 3053 t ORIGIN 1 gagctcctgg gaaacaaaag accgaaaaag cgaaaacaaa atcagaacaa ggcttaagta 61 ctttttcacc aattgtagca aacatttaac cacattttag cacactagca tatagcattg 121 tcctctgtta ttcgttttgc ttttctcctt tagtgttact tttcccccaa cgttacacca 181 ttttttgata tcaactaaac tgtatacatt atctttcttc agggagaagc atgtcccagc 241 ccactaagaa taagaagaaa gaacacggga ccgattccaa gtcatcccgc atgactcgga 301 cgttggttaa tcatattctt tttgaaagaa ttctcccgat ccttccggtg gagtctaatc 361 taagtaccta ttcggaagtg gaagagtatt cctcattcat ttcatgcaga tctgtgctca 421 ttaacgttac cgtttcccga gatgcaaatg ctatggtgga aggcaccttg gagttgatag 481 aatcgcttct tcaagggcac gaaatcattt cagataaggg tagcagtgac gttattgaat 541 caatactgat tatactaaga ttgttaagtg atgcgctaga gtataattgg caaaatcaag 601 aaagccttca ttacaacgac atttcgactc acgtagaaca tgaccaagaa cagaagtaca 661 gaccaaagct taacagtatt ctgcccgact actcgtcgac tcattccaat ggcaacaaac 721 actttttcca ccagagcaaa cctcaggcac tgataccgga actggcatcg aaattgcttg 781 agagttgcgc gaagttgaag ttcaatacaa gaactttgca aattttacaa aatatgatca 841 gtcatgttca tggaaacatt ctaacgactt tgagttcctc gattcttccc cgccacaaat 901 cctatctgac aaggcacaac catccttctc attgtaaaat gattgactct actctaggcc 961 atattctccg atttgtagcg gcttccaatc cgtccgagta ttttgaattt atcagaaaga 1021 gtgtgcaagt gcccgtaaca cagacacaca cgcattcaca ctcccattca cactctttgc 1081 catcttccgt ttataacagc atagtgcccc actttgatct tttcagcttc atctatttaa 1141 gcaagcataa ttttaagaaa tacttggaac tcatcaaaaa cttatcggtg acgttaagga 1201 aaacgattta tcattgccta cttttgcatt acagcgccaa agcaataatg ttttggataa 1261 tggctaggcc tgcggaatat tatgaactct tcaacttatt aaaagataat aacaatgaac 1321 actcgaaatc cttaaacacg ttaaaccata cacttttcga ggagatccat tcgactttta 1381 atgtgaatag catgataacc accaatcaaa atgctcatca aggctcatct tccccttcgt 1441 cctcctcgcc atcgtcacca cctagctcat catcatcgga taacaacaat caaaacataa 1501 tagcaaaatc cttaagtcgt cagctttctc accaccagtc atacattcaa cagcagtctg 1561 aaagaaaact acattcttca tggactacaa actctcaatc ctctacttca ctgtcatctt 1621 caacgtctaa ttcaacaaca actgatttct ctactcacac tcaaccagga gaatatgacc 1681 cttccttacc agatactccc acgatgtcta acatcactat tagtgcatct tcattattat 1741 ctcaaactcc aactccaaca acacaattgc aacagcggtt gaactcagca gctgcagccg 1801 ccgccgcagc tgcttcacca tcgaattcca ccccaactgg atacacagca gagcaacaaa 1861 gtcgcgcttc atacgatgca cacaaaactg gccatactgg taaggattat gacgaacatt 1921 ttttgtctgt cactcgtttg gataatgttt tggagttata cacgcacttt gatgatactg 1981 aggtactacc acacacatcc gtactgaagt ttttaactac tttgacaatg ttcgatattg 2041 acctttttaa tgaattaaac gctacatcat tcaaatatat tcctgattgt actatgcatc 2101 gtccaaaaga aagaacaagt tctttcaata atactgcaca cgagacaggt tccgaaaaga 2161 cttcgggtat aaaacatatt acacaaggct taaagaaatt aacttcttta ccttcctcaa 2221 ccaaaaaaac tgtaaaattt gtgaagatgt tgctaagaaa tttaaatggg aatcaagctg 2281 tatcagatgt tgccctctta gatacaatga gggccttact atcattcttt acaatgactt 2341 ctgcggtctt tctcgtggat agaaacttac cctcagtact ttttgccaag agactcatcc 2401 ccataatggg gacaaattta agcgtcggtc aagactggaa ttcaaaaata aataacagtt 2461 tgatggtttg tttgaaaaaa aactccacca cgtttgttca attacaatta atattcttct 2521 cttcagctat tcaattcgat catgaattat tactggcacg tctgagcatc gatacaatgg 2581 ccaacaattt aaacatgcag aagctatgcc tttatactga aggattcagg atattcttcg 2641 acataccaag taagaaggaa ttgcggaagg caattgcggt taaaatttct aaatttttca 2701 aaacattatt ctccattata gcagatattc ttttacaaga atttccgtat tttgatgagc 2761 aaatcaccga catagttgct tccattcttg acggtacaat tatcaatgag tatggtacga 2821 agaaacattt caaggggagc tcaccctctt tatgttcgac aacccggtca agatcaggat 2881 ctacatctca aagttcaatg acaccagttt ctccgctggg actggatact gatatatgtc 2941 caatgaacac cctgtcttta gttggttcaa gtacttcaag aaattctgac aacgttaatt 3001 cattaaacag ttcaccaaag aacttgtctt ctgatccata cttgtcacat cttgtggccc 3061 caagagcgcg tcatgcttta ggtgggccat ctagtattat aaggaataaa ataccgacta 3121 cattgacttc acctccagga acggaaaaat cttcaccagt acaacgtccg caaacggaaa 3181 gcatcagtgc cacaccaatg gccataacaa attctactcc attatcgtcg gcagcattcg 3241 gaattcgatc gcctttgcag aaaataagaa cgaggcgtta ttccgatgaa agtttaggta 3301 aattcatgaa atcaacaaat aattacattc aagaacattt gataccaaaa gatttgaatg 3361 aagcaactct tcaagatgct agaagaataa tgattaatat tttcagtatt tttaagagac 3421 cgaatagtta cttcatcatt cctcacaata taaactcgaa tttacaatgg gtttcgcagg 3481 attttagaaa tattatgaaa ccgattttcg tcgccatcgt aagtccggat gtagatttac 3541 agaatactgc tcaatcattc atggatacct tattatcgaa tgttattact tatggtgaat 3601 cagatgagaa tatcagtatt gaagggtatc atcttctttg cagttacact gtaacattat 3661 ttgcaatggg ccttttcgat ttgaaaatta ataatgaaaa gcgtcaaatt ctcttggata 3721 taactgtcaa gtttatgaag gttagatcac atttagcagg gatcgcggag gcctcacacc 3781 acatggaata cataagtgat tctgaaaaac tcacctttcc gctgattatg gggactgttg 3841 gtagggccct atttgtttca ttatactcta gtcaacaaaa aattgaaaag actttaaaga 3901 ttgcttacac agagtatctt tctgcaatca attttcatga gaggaatatt gatgatgctg 3961 ataaaacttg ggttcataat attgagtttg tagaagcgat gtgtcatgac aactacacaa 4021 cttctggttc aattgctttc caaaggagga caagaaataa tattttacga tttgctacta 4081 ttcctaacgc tatcttactt gattctatga ggatgatcta taagaagtgg catacttaca 4141 cacacagtaa aagtttagaa aaacaagaac ggaacgactt cagaaatttc gcgggtattt 4201 tagcctcttt gtcgggtatc ctattcatca ataaaaagat attgcaagaa atgtatccat 4261 acctactcga caccgtttca gaattgaaaa aaaatataga ctcttttatc tcaaaacaat 4321 gccaatggtt aaactatccg gatttattaa cgagagaaaa ttcaagagat attctaagtg 4381 tagaactgca tcctttgtct tttaacttac tttttaataa tttgaggctc aagttaaaag 4441 aacttgcttg ttcagactta tcaataccag aaaatgaaag ttcctatgtt ttattagaac 4501 aaataatcaa aatgctgcgg acaatcctag gtcgtgatga tgacaattat gtaatgatgc 4561 ttttttccac agagattgta gatcttattg atttattgac agatgaaata aaaaaaatac 4621 cagcctattg tccaaaatat ctcaaggcaa ttattcaaat gaccaaaatg ttcagtgcct 4681 tgcagcactc agaggttaat ttaggtgtca aaaatcattt tcacgttaaa aataaatggt 4741 tgaggcaaat cactgattgg tttcaagtga gtattgcgag agagtacgat ttcgaaaact 4801 tgtcaaaacc tctaaaagaa atggatttgg taaaaagaga catggatatt ctatacatag 4861 atacggcaat cgaagcttca accgctattg cgtacctcac gagacatact ttcttagaga 4921 ttccacctgc cgcgtcagat cccgaactat ctcgatctag gtctgtgata tttgggtttt 4981 atttcaacat cttaatgaaa ggccttgaaa aaagtagtga tcgtgacaat tacccagtat 5041 tcttgaggca caaaatgagt gtcctcaacg acaatgtaat actttcatta acaaatcttt 5101 caaacaccaa tgttgatgcg agtttgcagt tcaccttacc gatgggctat tccggaaatc 5161 gaaacattag gaatgcattt ttggaggtct tcattaatat cgttacgaac tatcggacat 5221 acacggctaa aactgacctt ggaaaattag aggcagcaga caaatttttg cgatatacga 5281 ttgaacatcc ccagctatcg tcctttggag cagcggtttg tcccgctagc gatattgatg 5341 cttatgctgc tggcttaata aatgcatttg aaacgaggaa tgccacccac attgtagtgg 5401 cacagttgat taaaaatgaa attgaaaaat cttccagacc tacggatatc cttagaagaa 5461 atagctgtgc tacgagatca ttatctatgc tagccaggtc caagggtaac gaatatttga 5521 ttcgcacttt gcaaccatta ctaaaaaaaa ttatccagaa cagagatttt tttgaaattg 5581 agaaactaaa accggaagat tcagatgctg aacgtcaaat agagctcttc gttaaataca 5641 tgaatgaatt attggaatcc atatccaact ccgtatctta ttttccccct cctttatttt 5701 atatttgcca aaacatttat aaagttgcgt gtgaaaaatt tccggatcac gcaattatcg 5761 ccgctgggtc tttcgtgttt ttacggtttt tttgtcctgc tttagtcagc cctgattctg 5821 aaaatatcat agatatttct cacttgagcg aaaagcgtac cttcatcagc ttggctaaag 5881 ttatccaaaa tattgccaat ggctcagaaa atttctccag atggccagct ttgtgttccc 5941 aaaaggattt tcttaaggaa tgtagcgata gaattttcag attcctagct gaactttgta 6001 gaacagatcg cacgatagac atccaagtga gaacagaccc aacgccaatt gcatttgact 6061 atcaattcct tcattccttt gtttaccttt acggtcttga ggtgagaagg aatgtgctaa 6121 atgaagcaaa acatgatgat ggtgacattg atggtgacga tttctataag accacatttt 6181 tacttattga tgatgttctt ggccaattag gccaacctaa aatggaattt tccaatgaaa 6241 taccaatata cataagagaa catatggacg actatccgga actgtatgag ttcatgaata 6301 ggcacgcgtt cagaaacatt gagacttcaa cagcgtacag cccaagcgtt cacgagtcca 6361 cctcaagtga aggcattcca attattacgt taacaatgtc aaatttctca gacagacatg 6421 tggacattga tacagttgct tacaagttct tgcaaattta tgctcgaatc tggaccacca 6481 aacactgttt aataatcgac tgtacagaat ttgacgaggg agggcttgat atgaggaaat 6541 ttatttcttt ggttatggga ctattaccag aagttgcacc caaaaattgt ataggctgtt 6601 actactttaa cgtaaacgag acatttatgg ataattatgg aaaatgtttg gacaaagaca 6661 acgtatatgt ttcctcgaaa attcctcatt atttcattaa tagtaactct gatgaaggac 6721 ttatgaaatc tgtgggtata actggacaag ggttgaaggt tctgcaagat attcgtgtct 6781 ctctgcatga tatcacgctt tatgacgaaa aaagaaatag atttacgccg gtatcgttga 6841 aaataggcga tatttacttt caagtcttgc atgaaactcc taggcaatat aaaataaggg 6901 acatgggtac tttattcgac gtaaaattca atgatgtcta cgaaattagc cgaatatttg 6961 aagtacatgt ttcgtcaata actggagtgg cagctgaatt tacagtaact tttcaggacg 7021 agagaaggtt gatttttagt agtccgaaat accttgaaat tgtgaagatg ttctattacg 7081 cacagatccg gttagaaagt gaatatgaaa tggataataa ttcgagtacc tcctccccaa 7141 attcaaacaa caaggtcaaa cagcagaaag agagaacaat tctattgtgc cacctactgt 7201 tagtatctct tattggtctg tttgatgaga gtaaaaaaat gaaaaacagt tcgtataacc 7261 taatagctgc cactgaggcg tcatttggtt tgaactttgg ctcccatttt catcgctctc 7321 ccgaggtgta cgtccccgaa gatactacaa catttttagg tgttattgga aagtctcttg 7381 cagagtctaa tccagaactc acagcctata tgtttatcta tgttttggag gcattgaaga 7441 acaacgtaat tcctcacgtt tacatccctc ataccatttg cggtttgtct tattggatcc 7501 ctaatttata ccaacatgtg tatttggctg atgatgaaga aggccccgaa aacatatctc 7561 acattttccg aattcttatc aggctctctg tgagagagac tgactttaaa gccgtataca 7621 tgcaatatgt ttggttgcta cttttagatg atggccgctt aactgacatt atcgttgatg 7681 aagttattaa tcatgcgtta gaaagagact ccgaaaaccg cgattggaag aaaacaatat 7741 cgttactgac tgtcctaccc actactgagg ttgctaataa tattattcaa aaaatattgg 7801 caaaaattag atcattttta ccgtcattga agttagaagc tatgacccaa agttggtctg 7861 aactaacaat attagttaag ataagcatcc acgttttttt tgaaacttct ttgctggtac 7921 agatgtactt accagagatc ctgtttatcg tatccttatt aattgatgtt ggtccaaggg 7981 aactcagatc atcactacac cagctattaa tgaatgtatg ccattccttg gctattaact 8041 cagctttacc acaagatcat agaaataatc tagatgaaat aagtgatata tttgcacatc 8101 aaaaggtgaa gtttatgttt gggttcagcg aggacaaagg acgaatttta cagattttta 8161 gcgcttcttc ttttgcaagc aagtttaata ttctggattt cttcatcaat aatatattat 8221 tgctgatgga atattcttca acgtacgaag caaacgtgtg gaagacaaga tacaagaaat 8281 atgtcttgga atctgtgttt acaagtaatt cttttctttc ggcacgttca atcatgattg 8341 ttggtataat gggtaaatct tacataactg aagggttatg caaggctatg ttaattgaaa 8401 ccatgaaagt tatcgccgaa ccaaagatta ctgacgagca tcttttctta gccatatctc 8461 atatttttac ttattccaaa attgttgaag gtttggatcc caaccttgac ttaatgaagc 8521 acttattttg gttttcaaca ctcttccttg aatcacgtca cccgataatt tttgagggtg 8581 cccttctctt tgtgtcaaac tgtataaggc gcctatacat ggcccagttt gaaaatgaaa 8641 gcgaaacatc attgataagt actttactta aggggagaaa gtttgctcat acctttttaa 8701 gcaagataga gaatcttagt ggtattgttt ggaatgaaga taattttaca cacattctga 8761 ttttcatcat taataaagga ctatccaatc ctttcattaa gagtacggct tttgatttct 8821 tgaagatgat gtttagaaac tcctactttg agcatcaaat caatcagaaa tctgatcatt 8881 atttgtgcta tatgttccta ttgtattttg ttttaaactg caatcaattt gaggaacttt 8941 taggtgacgt tgattttgaa ggagaaatgg ttaacattga aaacaagaac accattccta 9001 aaattttgtt agagtggttg agttcggata acgaaaatgc aaacattacc ctctatcaag 9061 gtgcgatact gttcaaatgt tcagttacgg atgaaccaag tagatttagg tttgcgttga 9121 ttattaggca tctattgaca aagaaaccca tttgtgcatt gcgtttttac agtgttattc 9181 gtaacgaaat aagaaaaata tcagcatttg agcaaaattc ggattgtgtt ccacttgctt 9241 tcgatatttt aaacttatta gtgacgcatt cagagtctaa ttcgttagaa aaacttcacg 9301 aagaatccat tgaacgtcta accaaaagag gtttatcgat tgtgacttct tctggtatat 9361 ttgcgaagaa ctccgacatg atgatacctt tagatgtaaa acctgaagat atctatgaac 9421 gtaagagaat aatgacaatg attttatcaa ggatgtcatg ttctgcttag aggtgttaca 9481 taaactaatg aaagaaatat caatatctat ctgtaagcat gaatgtacat atctcatgtt 9541 agggttttct tatcgctaat ttttcgcaat ttgttacgtg ggttgctttt atacagctac 9601 aatttttata tattctatcg tgtaatgaat ggctcagtaa attcaagcgc cacatagact 9661 aatgtacata ccaatgcatt ttaattgtaa gaataaaagg ggccattcat ctaccgtctt 9721 agttgaaagt gtttctgtga attttttcaa attccgtttt ttccttttta tataatagca 9781 tggtggcacg agcatcttcg actgaagaat gctcaccttc ttgaatggaa atttttaaaa 9841 cctccctggt taatttctt // LOCUS HUMMHDQ3L 967 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human MHC class II HAL-DQ-LTR3 (DQ,w8) DNA fragment, long terminal repeat region. ACCESSION M33841 KEYWORDS major histocompatibility complex. SOURCE Human (pot. haplotype DQ,w8) lung carcinoma DNA, clone LC14. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 967) AUTHORS Kambhu,S., Falldorf,P. and Lee,J.S. TITLE Endogenous retroviral long terminal repeats (LTR) within the HLA-DQ locus JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 4927-4931 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.S.Lee, 25-APR-1990. FEATURES from to/span description rpt 1 7 inverted repeat A rpt 961 967 inverted repeat B rpt 560 810 R region signal 792 797 poly-A signal site 74 79 1/2 GRE site 80 87 enhancer core site 530 536 TATA box BASE COUNT 254 a 235 c 222 g 256 t ORIGIN Chromosome 6p21.3. 1 tgtggggaaa agcaagagag atcagattgt tactgtgtct gtgtagaaag aagtagacat 61 agagactcca ttttgttatg tactaagaga aattcttctg ccttgagatt ctgttaatct 121 ataaccttac ccccaacccc gtgctctctg aaacatgtgc tgtgtcaact cagagttgaa 181 tggattaagg gcggtgcaag atgtgctttg ttaaacagat gcttgaaggc agcatgctcc 241 ttaagagtca tcaccactcc ctaatctcaa gtacccaggg acacaaaaac tgcggaaggc 301 cgcagggacc tctgcctagg aaagccaggt attgtccaag gtttctcccc atgtgagagt 361 ctgaaatatg gcctcgtggg aagggaaaga cctgaccatc ccccagcccg acacccgtaa 421 agggtctgtg ctgaggagga ttagtaaaag aggaaggaat gcctctttca gttgagacaa 481 gaggaaggca tctgtctcct gcctgtccct gggcaatgga atgtctctgt ataaaacccg 541 attgtatgct ccatctactg agatagggaa aaactgcctt agggctggag gtgggacctg 601 cgggcagcaa tactgctttg taaagcattg agatgtttat gtgtatgcat atctaaaagc 661 acagcactta atcctttaca ttgtctatga tgcaaagacc tttgttcaca tgtttgtctg 721 ctgaccctct ccccacaatt gtcttgtgac cctgacacat ccccctcttc gagaaacacc 781 cacaaatgat caataaatac taagggaact cagaggctgg cgggatcctc catatgctga 841 acgctggttc cccgggtccc cttatttctt tctctatact ttgtctctgt gtctttttct 901 ttcctaagtc tctcgttcca ccttacgaga aacacccaca ggtgtggagg ggcaacccac 961 ccctaca // LOCUS HUMMHDQ5L 960 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human MHC class II HAL-DQ-LTR5 (DQ,w8) DNA fragment, long terminal repeat region. ACCESSION M33842 KEYWORDS major histocompatibility complex. SOURCE Human (pot. haplotype DQ,w8) lung carcinoma DNA, clone LC14. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 960) AUTHORS Kambhu,S., Falldorf,P. and Lee,J.S. TITLE Endogenous retroviral long terminal repeats (LTR) within the HLA-DQ locus JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 4927-4931 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.S.Lee, 25-APR-1990. FEATURES from to/span description rpt 1 7 inverted repeat A rpt 954 960 inverted repeat B rpt 555 803 R region signal 785 790 poly-A signal site 74 79 1/2 GRE site 80 87 enhancer core site 525 531 TATA box BASE COUNT 250 a 232 c 219 g 259 t ORIGIN Chromosome 6p21.3. 1 tgtggggaaa agaaagagag atcagattgt tactgtgtct gtgtagaaag aagtagacat 61 agagactcca ttttgttctg tactaagaca aattcttctg ccttgggatg ctgttaatct 121 ataaccttac ccccaaccct gtgctctctg aaacatgtgc tgtgtcaact cggggttaaa 181 tggattaagg gcggtgcaag atgtgctttg ttaaacagat gcttgaaggc agcatgctcc 241 ttaagagtca tcaccactcc ctaatctcaa gtacccaggg acacaaacag aaggccgcag 301 ggacctctgc ctaggaaagc caggtattgt ccaaggtttc tccccatgtg acagtctgaa 361 atatggcctc gtgggaaggg aaagacctga ccgtccccca gcctgacacc cgtaaagggt 421 ctgtgctgag gaggattagt ataagaggaa ggcatgcctc ttgcagttga gacaagagaa 481 aggcatctct ctcctgtccg tccctgggca atggaatgtc tcggtataaa acccgattgt 541 atgttccatc tactgagata aggaaaaccg ccttagggct ggaggtggga catgtgggca 601 acaatactgc tctgtaaggc attgagatgt ttatgtgtat gcatatctaa agcacagcac 661 ttaatccttt accttgtcta tgatgcagag agctttgttc acgtgtttat ctgctgacct 721 tctctccact attatcttat gaccctgcca catccccctc tctgagaaac acccaaaaat 781 gatcaataaa tactaaggga actcagaggc tagcgggatc ctccatatgc tgaatgctgg 841 tcccctgggc ccccttattt ctttctctat actttgtctc tgtgtctttt tcttttctaa 901 gtctctcatt ccacctaacg agaaacaccc acaggtgtgg aggggcaacc caccccttca // LOCUS NEUAMTR 5928 bp ds-DNA PLN 02-AUG-1990 DEFINITION N.crassa mating type protein gene, complete cds. ACCESSION M33876 KEYWORDS mating type protein. SOURCE N.crassa (strain 74-ORS-A) DNA. ORGANISM Neurospora crassa Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina; Pyrenomycetes; Sordariales; Sordariaceae. REFERENCE 1 (bases 1 to 5928) AUTHORS Glass,N.L., Grotelueschen,J. and Metzenberg,R.L. TITLE The Neurospora crassa A mating-type region JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 4912-4916 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by N.L.Glass, 26-APR-1990. FEATURES from to/span description pept 4121 4283 mating type protein, exon 1 4343 5046 mating type protein, exon 2 IVS 4284 4342 mating type protein intron A signal 3858 3906 GC signal signal 3945 3949 CAAT box signal 5319 5326 poly-A signal BASE COUNT 1470 a 1459 c 1526 g 1473 t ORIGIN 1 cgagaccgtt gttgcttgct gtatccatgc cggtgtcaaa gtcttgtcgt cgtatgcagg 61 agtctgaaaa ccaacccgag aagggtgggg caagtgactc tgcagtgatg tcaagactga 121 ggtccagctg ctgattgaaa tggctgatag aacagacgga ccaagactga aactgatgct 181 gagctgcgct gatggaatgt gccaagagaa tgaagctgtc cactgccggc gagcacgcct 241 agtgtgctgt gatttgagga cgggactccc tactcgtagg attgacgaga gattgaacag 301 agagccatcg acttatttgt gatgtcttgg ttgttgatca actgttgccg gctctccaaa 361 tgcgaagtcg gcgagtacga gcgttagtcc gtgaatgtgg gacagcggta gtgaatgaga 421 catgatctgg atcaatgtag tcgcaagcgt gagtaaagaa tcaggacgcc tgcttgagaa 481 ggaatcgcat ggagtcgtcc tcagtcatca tgaagtccgg gtcctggcgc cacggacagg 541 tcggtcgaca tgtcgataat gtcgataatg tggttaggct cctcccactc gaagtcgggg 601 aaagcgccga cctcctcggc ttgttgaggt tgaacaacat cgttaagtgc ggcttcttcg 661 gcagccaact gccgttcgac tcttcccaga caaagtcgag catccggcaa aattcgttgc 721 cgatcttcgg gcgagattac gcaaggatat ctcatgcgag gaggaacggg atcggtggtg 781 ggaaatcgcg gctggtcggg gtaaaggtga ggattctcag ctcgatgacg atgaacctcc 841 atttccgcca gttccctgaa gcgagctttt gccgcgggtg ctcgctgttc cacaagcccg 901 caacaatttg agctgtatag atatggttaa taaatgtcat gcaggacagg cagtttgttc 961 acatcaatat tgcgagctga aagactcgga tcttcggaga acagagtatc caacagccat 1021 tggtagtaga gaacgaattg gttgcgcggg cggctagtac cattgctttg agttaccgaa 1081 ctctgttcaa aaaagttgct gggcagagtc atgtcgatgg tatgagagct ttgctcttgc 1141 tgctcaacat tagcacctcc ttggtttgag atgcccaaga gctctcgctt ggaatggtgg 1201 gagttcgcgc tggaatgtct ggttagcttg agcaatgggg gcccaatgtt tggtgaactt 1261 acaagggggc gaaactgcga gtatgtccca gtttccccat tccatcatca tgagcccaaa 1321 tgtgatcgtg cagatcgcga tgctggactc gtcgggggca accatgagca aggcctcttc 1381 gccaaacacg acactgaaag gagtcagcta tgagctataa gagaaacttt cctcgggcca 1441 acactcacac tgagttgtcc atcgcataga caagatcctc ttcagcaaat tcggccagat 1501 gggacctgaa cagcattacc tggatcctgc catagtgaat tgcagtcaca gggctgagac 1561 cgggtgcgat gtcgctgatt gaatcaacgt ctaaggcaga cattgtgata gaggggtgca 1621 gacggcgact acaggtgtgc ttggatgtgg ttatggaatg gatgggacag acgaagtgta 1681 agaagattga cgtatatgaa gatgaatgac aacgaggacc ggtagttggt ggaaaacgga 1741 attgtcgagt gttgagtttg gaggaaggaa gagggggtat ttgcgagaat ttgagccggt 1801 atttgtaggt gatacgacaa tctgctctgc gtgggttaat gtcaaggtga atgcaggaaa 1861 ggcccaatac ctcccgcagc tcgtcctcct attgttcgcg ggaaagggta cgcattttac 1921 tattgtttct gtggcttgcc agctggcgca ccttatgtga ttggtcaaat tgacgtttgc 1981 cctaaggtcg gccgggagaa caataggaag gacttgggat gaaatttggc atacgatgcc 2041 cctcaaatcg gcgagtgacc ttggctgatt ctcacaggag aacaatagga ataacttggg 2101 atgaatctca gcatgcagtg cccctcgtca agtaatctcc acctcaagtt tcacaggaga 2161 acaataggaa ggacctggat tggaaacctg ccaggcaatg tccctcgaaa gatattttgg 2221 aaccctgtgt ctttgttggt tcacttcttc gaaactccgt gtcaacaaaa cttctctcca 2281 tacttagcag tcgcatggca gctttctcaa gcgttcattg ttgaggtttc cttttcgtca 2341 gctgtcgaca tgaatcttct caacatgcaa cctaaaaggt cagagcaacc agctatgttc 2401 gaagaaaacc gtgcctctag ccaggaaggc caggatctcg aagtgatgta caaggtagca 2461 attcttctga cccggaaaca ctcgcttgct tgtcgctaat ggattggtca gaaactccat 2521 cagctacagg ctaggctttc ccgttcagtt ctttcagagg caatcaagga gttcgaagag 2581 aacttcggtg tcttttccat gaagccaagc tcttgctatg ctcaacgagt tcgaagtatc 2641 gccaaagctg gttcgggtct agcaacgagt tcggatctag cgacgagaga agaatcatca 2701 agacatcatg ctgcatcatt gagtcgacaa acacaattct taacttcctc tcatttcttg 2761 agaagaatcg aggattgcca ttcggtggag atcaaagact ccaacaagct gcctacaaag 2821 gccagcagtt tgcgttccgc ctccttcgct cacttacact tcacaaagct gctcaggagg 2881 ttccgggaaa ggactttggc ttggtctacg gaaaagatgt gtacgtactg aatggacata 2941 ttttgcacag gtcgaagcaa gagatcgtgg ggcaggcggg aggaagaaac tggcatgtcg 3001 accataccct ccatcctttg aggcgcgttc caggcacccc atggcacaag ttctttggca 3061 atcttgaagt tggcgacgac aagcaacttc gcctcttcga tgatgatgcg gccgtcgaca 3121 gttaccgagt cggtcctcag aagttctttg tggttattcc ggaaactgct gaatttattt 3181 tggacgaagt cagcagcgag catcagagag tcgctacaat tcacacagag gtaagtactt 3241 gaacgtgtct gaaaactaca aaatttgcac gactgactga aggtagaatg gacatgtcca 3301 gccgccagca ccgacatcca ttcagcaaga agtaagttct cctatctcga tttaatgtag 3361 gtaatcatca ctgacatcac ggcaggctct cctcaggaag ttggactttg ccatgacaac 3421 atcattgcct ggttatgttg tagaaggaca acctgagatt gtgtttcatc atgaacgtta 3481 cgccaggttc gtatgatcct gcttactttt cacggatgat gatgtgctaa caaccgatca 3541 acagatcccc gttgactaca gtcaggagcg cccacttagc attctctccc atgttttcac 3601 tcgacccgca ctttggggag agggtttgga gcttgctgat cacttcgacc cgcgagacgg 3661 tgtgcagcaa gaggagcaca tctattacat ttgatggata tggtagaatc cgtggctgca 3721 caaacaatgc tacttttaat ttaagaaaag tattattcga tcagagtggc tttacttttt 3781 tcttagaagt tcaacaaagc tgttatgtgt tatgtaatcc aagccctcgc tgaaagttgt 3841 gcccccaagg cagcaagccc cccccccccc cccccccccc ccccaccccc ctccctcctc 3901 tcccccgcgg tcgtcaagtg aagggagaga gaagccgctc cacccaaatt aaccaaccaa 3961 ccccatgtct cctatttaag aaagcccagt tcatcttttc caccttcacc caaacttccc 4021 accatctttc cccgaacatc aacttcgcaa ccaaaatctc ggcagcacta cctcacgtgt 4081 tcagtgctct ccaatcaata atccatccac cagaaacacg atgtcgggtg tcgatcaaat 4141 cgtcaagacg ttcgccgacc tcgctgagga cgaccgtgaa gcggcaatga gagctttctc 4201 aaggatgatg cgtagaggta ccgaacctgt tcgccgaatc cccgcggcaa agaagaaggt 4261 caacggcttc atgggtttca gatgtgagtc aaatctgaat caacattgtc gttgatccat 4321 ggctgattgc tcttcatttc agcgtactat tccccgctct tctctcagct cccgcaaaag 4381 gagagatcgc ccttcatgac tattctctgg cagcatgatc ccttccacaa tgagtgggat 4441 ttcatgtgct cggtgtattc gtcaatccgg acctaccttg agcaggagaa ggttactctg 4501 caactctgga ttcactatgc tgtcggccat ctgggagtga ttatccgcga caactacatg 4561 gcatcctttg gctggaacct cgtccgtttt cccaacggca ctcacgacct cgagcgcacg 4621 gctcttcctt tggttcagca caatctccag cccatgaacg gcttatgcct gctcaccaag 4681 tgcctcgaga gcggattgcc tcttgccaat cctcactctg tcatcgccaa gctttcagat 4741 cctagctacg acatgatctg gttcaacaag cgtcctcacc gtcagcaggg acacgccgtt 4801 caaactgatg aatctgaagt tggagtttcg gcgatgttcc ctcgcaatca cacggtcgct 4861 gcagaggtag atggcatcat caatcttcct ctctcccatt ggattcagca gggagaattc 4921 ggtaccgagt ctggatactc agctcagttt gagaccttgt tggattcaat tctcgagaat 4981 ggacacgcct ccagcaatga cccttacaac atggctctgg ctatcgatgt tcccatgatg 5041 ggttagtgga agatgaggta ccatcttgca aaactttacc cgtgtgctaa ccgattaaca 5101 ggatttaacg gaggagcata gaagcacggc gcagtcaccg ttttctttcc ttgtcacatc 5161 tggatttcgt gttacgggca tacaaagcga gggcgaaaag ggtctagtta ggtttctttg 5221 tgcatacatt gggcaatcat gagacttcag aatcgacggg gtggaatggg caattacacg 5281 gcaaggagac aggtacgcct agaaggcgaa agagtatcaa ataaaatcaa atcagcggcg 5341 tccaccatct gatccgggat ggccttcact actcgggggt tgcggttcgc ttttgtatgg 5401 ggagaggggg gaaaaagttt ggccagccaa aagcgacccg aatggaaccc tagtcaatca 5461 atacctatga acgcaagcgt ctgcggtgtc attgccggat ttgacatgtc gttgagataa 5521 agaaacaggc ccgccgctga cggcaacgct tatgcatgca accccgctgc gctgaatgct 5581 tcagccgcaa aactggggca atgcgggagc tgtggccccc gttcatgcta gtgtacaggg 5641 ttgctctgct tctaagatcc tgataagggt ccgctgatgt ttgtacatac tacatatcag 5701 tccctgtaag tttgctagtc tggttcctgc cccatatttt cttccaaggg ggtaatatgg 5761 ggactgtaag gcggactggt ctatctacga gtccgggtcc ccgcaggaac tgtacccttc 5821 agtgggtccc ggtcacgtat cctgcacgtt ccgtctcggc caggaatggc agctttcccc 5881 gttgattttc ggtttatcat cacataaagg ttttggttgc ttgtcgac // LOCUS PFARGEB 2126 bp ds-DNA INV 02-AUG-1990 DEFINITION P.falciparum 18S ribosomal RNA not in asexual parasites. ACCESSION M19173 KEYWORDS 18S ribosomal RNA; ribosomal RNA. SOURCE P.falciparum DNA, clone B. ORGANISM Plasmodium falciparum Eukaryota; Animalia; Protozoa; Microspora; Microsporea; Microsporida; Haemosporina; Plasmodiidae. REFERENCE 1 (bases 1 to 2126) AUTHORS McCutchan,T.F., de la Cruz,V.F., Lal,A.A., Gunderson,J.H., Elwood,H.J. and Sogin,M.L. TITLE Primary sequences of two small subunit ribosomal RNA genes from Plasmodium falciparum JOURNAL Mol. Biochem. Parasitol. 28, 63-68 (1988) STANDARD simple staff_review REFERENCE 2 (bases 1 to 2126; revises [1]) AUTHORS Sogin,M.L. JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Computer-readable copy of sequence for [2] kindly submitted by M.L.Sogin, 01-AUG-1990. SOGIN@EVOL1.MBL.EDU BASE COUNT 704 a 296 c 412 g 714 t ORIGIN 1 aacctggttg atcttgccag tagtcatatg cttgtctcac agattaagcc atgcaagtga 61 aagtacatat gtaagtaata tattgaaact gcgaacggct cattaaaaca gttataatct 121 acttgatgtt tttaatataa ggataactac ggaaaatctg tagctaatac ttgtgaaaat 181 accttttgat atatacatat gtatgtatca ttaaggtatg tatttgttag atataagaat 241 aaaataaata taattgaatt ataacaaaga agaaacacat aaaatatgtg tattatcaat 301 cgagtatctg acctatcagc ttttgatgtt agggtattga cctaacatgg ctatgacggg 361 taacggggaa ttagagttcg attccggaga gggagcctga gaaatagcta ccacatctaa 421 ggaaggcagc aggcgcgtaa attacccaat tctaaaaaag agaggtagtg acaagaaata 481 acaatacaat atcgaaaaat gattttgtaa ttggaatgat aggaatttac aaggttccta 541 gagaaacaat tggagggcaa gtctggtgcc agcagccgcg gtaattccag ctccaatagc 601 atatattaaa attgttgcag ttaaaacgtt cgtagttgaa tattaaagaa tccgatgttt 661 catttaaact ggtttgggaa aaccaaatat attatatatt ttgctttgtt caaaataagg 721 ttttctaata aattatgttt ttatcagata tgacagaatc ttttttaaaa tctcttcaat 781 atgcttttat tgcttttgag aggttttgtt actttgagta aaattaagtg ttcataacag 841 acgggtagtc atgattgagt tcattgtgtt tgaatactac agcatggaat aacaaatatg 901 aataagctaa ttattttttt tttcattatt ttttttgata ttcttattag cttagttacg 961 attaatagga gtagctttgg gggcattcgt attcagatgt cagaggtgaa attctaagat 1021 tttctggaga cggactactg cgaaagcatt tgcctaatct atttccatta atcaagaacg 1081 aaagttaagg gagtgaagac gatcagatac cgtcgtaatc ttaaccataa actataccga 1141 ctaggtgttg gatgaatata aaaaatatat aaatatgtag catttcttag ggaatgttga 1201 ttttatatta gaattgcttc cttcagtacc ttatgagaaa tcaaagtctt tgggttctgg 1261 ggcgagtatt cgcgcaagcg agaaagttaa aagaattgac ggaagggcac caccaggcgt 1321 ggagcttgcg gcttaatttg actcaacacg ggaaaactca ctagtttaag acaagagtag 1381 gattgacaga ttaatagctc tttcttgatt tcttggatgg tgatgcatgg ccgtttttag 1441 ttcgtgaata tgatttgtct ggttaattcc gataacgaac gagatcttaa cctgctaatt 1501 agcggtaagt acactatatt tttatttgaa attgaatata ggtaattata catgtttatt 1561 cagtgttcaa attaggatat tttttttatt aaaatattct tttccctgtt ttactaataa 1621 tttgtttttt tttactctat ttctctcttc ttttaagaat gtacttgctt gattaaataa 1681 agcttcttag aggaacagtg tgtatctaac acaaggaagt ttaaggcaac aacaggtctg 1741 tgatgtcctt agataaacta ggctgcacgc gtgctacaat gatatatata acaagttgtt 1801 aaaaatgtac ttataaataa gtgtgtacaa tttttcctgt actgaaaagt ataggtaatc 1861 tttatcagta tatatcgtaa ttgggataga ttattgcaat tattaatctt gaacgaggaa 1921 gcccgtcgct cctaccgatt gaaagatatg ataaattgtt tggatatgaa ttaaaataat 1981 agaagtcgta acaaggtttc cgtaggtgaa cctgcggaag gatcattaat atatgaaacg 2041 ccgagctcga attcgtaatc atggtcatag ctgtttcctg tgtgaaattg ttatccgctc 2101 acaattccac acaacatacg agccgg // LOCUS ALCRR45S 103 bp ss-rRNA RNA 02-AUG-1990 DEFINITION A.tuberosum chloroplast 4.5S ribosomal RNA. ACCESSION M35406 KEYWORDS 4.5S ribosomal RNA. SOURCE A.tuberosum chloroplast young leaf rRNA. ORGANISM Chloroplast Allium tuberosum Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Liliidae; Liliales; Liliaceae; Allium tuberosum. REFERENCE 1 (bases 1 to 103) AUTHORS Zhen-Qi,C., Hong,Z., Guo-Ya,L. and Xiao-Yang,L. TITLE The nucleotide sequences of chloroplast 4.5 S rRNAs from four species of plants, celery (Apium graveoleus), barley (Hordeum vulgare), Chinese chive (Allium tuberosum) and dayflower (Commelina communis) JOURNAL FEBS Lett. 200, 193-196 (1986) STANDARD simple staff_review FEATURES from to/span description rRNA 1 103 4.5S ribosomal RNA BASE COUNT 29 a 18 c 31 g 25 t ORIGIN 1 taaggtcacg gcgagacgag ccgtttatca ttacgatagg tgtctagtgg aagtgcagtg 61 atgtatgcag ctgaggcatc ctaatagacc gagagatttg aac // LOCUS APIRR45S 103 bp ss-rRNA RNA 02-AUG-1990 DEFINITION A.graveoleus chloroplast 4.5S ribosomal RNA. ACCESSION M35404 KEYWORDS 4.5S ribosomal RNA. SOURCE A.graveoleus chloroplast young leaf rRNA. ORGANISM Chloroplast Apium graveoleus Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Rosidae; Apiales; Apiaceae; Apium graveoleus. REFERENCE 1 (bases 1 to 103) AUTHORS Zhen-Qi,C., Hong,Z., Guo-Ya,L. and Xiao-Yang,L. TITLE The nucleotide sequences of chloroplast 4.5 S rRNAs from four species of plants, celery (Apium graveoleus), barley (Hordeum vulgare), Chinese chive (Allium tuberosum) and dayflower (Commelina communis) JOURNAL FEBS Lett. 200, 193-196 (1986) STANDARD simple staff_review FEATURES from to/span description rRNA 1 103 4.5S ribosomal RNA BASE COUNT 28 a 19 c 32 g 24 t ORIGIN 1 gaaggtcacg gtgagacgag ccgtttatca ttacgatagg tgtctagtgg aagtgcagtg 61 atgtatgcag ctgaggcatc ctaacagacc ggcagatttg aac // LOCUS BLYRR45S 96 bp ss-rRNA RNA 02-AUG-1990 DEFINITION H.vulgare chloroplast 4.5S ribosomal RNA. ACCESSION M35405 KEYWORDS 4.5S ribosomal RNA. SOURCE H.vulgare chloroplast young leaf rRNA. ORGANISM Chloroplast Hordeum vulgare Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae; Hordeum vulgare. REFERENCE 1 (bases 1 to 96) AUTHORS Zhen-Qi,C., Hong,Z., Guo-Ya,L. and Xiao-Yang,L. TITLE The nucleotide sequences of chloroplast 4.5 S rRNAs from four species of plants, celery (Apium graveoleus), barley (Hordeum vulgare), Chinese chive (Allium tuberosum) and dayflower (Commelina communis) JOURNAL FEBS Lett. 200, 193-196 (1986) STANDARD simple staff_review FEATURES from to/span description rRNA 1 96 4.5S ribosomal RNA BASE COUNT 29 a 17 c 30 g 20 t ORIGIN 1 taaggtagcg gcgagacgag ccgtttaaat aggtgtcaag tggaagtgca gtgatgtatg 61 cagctgaggc atcctaacga accgaacgat ttgaac // LOCUS CEVCG 371 bp ds-DNA circular VRL 02-AUG-1990 DEFINITION Citrus exocortis viroid RNA sequence, complete genome. ACCESSION M34917 KEYWORDS complete genome. SOURCE Citrus exocortis viroid (strain A) RNA. ORGANISM Citrus exocortis viroid Viridae; Nonclassified viruses. REFERENCE 1 (bases 1 to 371) AUTHORS Visvader,J.E., Gould,A.R., Bruening,G.E. and Symons,R.H. TITLE Citrus exocortis viroid: Nucleotide sequence and secondary structure of an Australian isolate JOURNAL FEBS Lett. 137, 288-292 (1982) STANDARD simple staff_review BASE COUNT 72 a 112 c 112 g 75 t ORIGIN 1 cgggatcttt cttgaggttc ctgtggtgct cacctgaccc tgcaggcagg aaaagaaaaa 61 agaggcggcg ggggaagaag tccttcaggg atccccgggg aaacctggag gaagtcgagg 121 tcggggggga cagctgcttc ggtcgccgcg gatcactggc gtccagcgga gaaacaggag 181 ctcgtctcct tcctttcgct gctggctcca catccgatcg tcgctgaagc gcctcgcccc 241 ctcgcccgga gcttctctct ggagactacc cggtggaaac aactgaagct tcaaccccaa 301 accgcttttc ttgtatcttc actgctctcc gggcgagggt gaaagccctc ggaaccctag 361 attgggtccc t // LOCUS COMRR45S 103 bp ss-rRNA RNA 02-AUG-1990 DEFINITION C.communis chloroplast 4.5S ribosomal RNA. ACCESSION M35407 KEYWORDS 4.5S ribosomal RNA. SOURCE C.communis chloroplast young leaf rRNA. ORGANISM Chloroplast Commelina communis Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Commelinales; Commelinaceae; Commelina communis. REFERENCE 1 (bases 1 to 103) AUTHORS Zhen-Qi,C., Hong,Z., Guo-Ya,L. and Xiao-Yang,L. TITLE The nucleotide sequences of chloroplast 4.5 S rRNAs from four species of plants, celery (Apium graveoleus), barley (Hordeum vulgare), Chinese chive (Allium tuberosum) and dayflower (Commelina communis) JOURNAL FEBS Lett. 200, 193-196 (1986) STANDARD simple staff_review FEATURES from to/span description rRNA 1 103 4.5S ribosomal RNA BASE COUNT 31 a 18 c 31 g 23 t 0 others ORIGIN 1 taaggtagcg gcgagacgag ccgtttatca ttacgatagg tgtcaagtgg aagtgcagta 61 atgtatgcag ctgaggcatc ctaacagacc gagagatttg aac // LOCUS HUMBKM 615 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human banded krait minor satellite (Bkm) repeat. ACCESSION M35828 KEYWORDS banded krait minor satellite repeat. SOURCE Human DNA, clone lambda-X13. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 615) AUTHORS Erickson,R.P., Ross,C.E., Gorski,J.L., Stalvey,J.R.D. and Drumm,M.M. TITLE Bkm sequences from the human X chromosome contain large clusters of GATA/GACA repeats JOURNAL Ann. Hum. Genet. 52, 167-176 (1988) STANDARD simple staff_review BASE COUNT 258 a 90 c 87 g 180 t ORIGIN X chromosome. 1 agctttggtt caatttttat ggtttttatg gaaggtacaa agttactaat gcaccacccc 61 acagtaagca ccagccccac atggtttcat agagaaatat tagaaaatct tcaaagattg 121 ggtagttgtg atgctacgaa aacttttcca aaacaaactc ctactgaagt tttatgaaat 181 actaaaatat tgatacttta acctaataga tagtacaata aaacctacat ataattgcac 241 ttatggatat agatgtacta attaaaatac tagcaaacat aacccaacac tgcattcaga 301 tataacatac catgaccaaa agaacttcat tctattaatg taaaaaaaat cacattaata 361 gaattaaggg gaaaacatat gattatctac agtgatgcta aatgaaacca acaatattta 421 aaattattct gataagaccc tcaagaactt gaattgatgg agattcaact atatatatat 481 aaatatatgt ttataaatat agatagacag atagatagat agacagatag atagatagat 541 agatagatag atagatagat agatagatat agatatagat actttaatcc taaaggcaag 601 atcttaccta ctgca // LOCUS HUMBKMX 206 bp ds-DNA PRI 02-AUG-1990 DEFINITION Human banded krait minor satellite (Bkm) repeat. ACCESSION M35829 KEYWORDS banded krait minor satellite repeat. SOURCE Human DNA, clone lambda-X81. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 206) AUTHORS Erickson,R.P., Ross,C.E., Gorski,J.L., Stalvey,J.R.D. and Drumm,M.M. TITLE Bkm sequences from the human X chromosome contain large clusters of GATA/GACA repeats JOURNAL Ann. Hum. Genet. 52, 167-176 (1988) STANDARD simple staff_review BASE COUNT 93 a 25 c 39 g 49 t ORIGIN X chromosome. 1 agtctacaga gctgcaagaa caccacatca taaatcttac gatttgaatg acatcgatag 61 atagatagat agatagatag atagatagat agatagatag atagatagat agatagatag 121 atatagatag atacatacat acatacatac acacatagaa atagagatat cctgatggaa 181 agaataaacc atgagtctgg taatag // LOCUS MENRR5S 128 bp ss-rRNA BCT 02-AUG-1990 DEFINITION M.tindarius 5S ribosomal RNA. ACCESSION M34910 KEYWORDS 5S ribosomal RNA. SOURCE M.tindarius (strain DSM 2095) rRNA. ORGANISM Methanolobus tindarius Prokaryota; Bacteria; Mendosicutes; Archaeobacteria; Methanomicrobiales; Methanosarcinaceae. REFERENCE 1 (bases 1 to 128) AUTHORS Willekens,P., Stetter,K.O., Vandenberghe,A., Huysmans,E. and De Wachter,R. TITLE The structure of 5S ribosomal RNA in the methanogenic archaebacteria Methanolobus tindarius and Methanococcus thermolithotrophicus JOURNAL FEBS Lett. 204, 273-278 (1986) STANDARD simple staff_review FEATURES from to/span description rRNA 1 128 5S ribosomal RNA BASE COUNT 32 a 33 c 34 g 29 t ORIGIN 1 ggagtttggc ggccatagcg gcggggcaat tcctgtaccc atcccgaaca cagaagataa 61 gcccgcctgc gttctatact gtactaaagt atgagagtct ttgggaaata tggaacgctg 121 ccatctcc // LOCUS MUSSPIX 980 bp ds-DNA ROD 02-AUG-1990 DEFINITION Mouse protease inhibitor gene, 5' flank. ACCESSION M35824 KEYWORDS protease inhibitor gene. SOURCE Mouse DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 980) AUTHORS Needham,M., Mills,J.S. and Parker,M.G. TITLE Organization and upstream DNA sequence of the mouse protease inhibitor gene JOURNAL Nucleic Acids Res. 16, 6229-6229 (1988) STANDARD simple staff_review FEATURES from to/span description mRNA 964 > 980 protease inhibitor mRNA BASE COUNT 324 a 200 c 208 g 248 t ORIGIN 1 taaacagaaa ttgtcttgtg ctgttaggaa agaacatcaa actcttttta ttaagtccct 61 agttgtgtaa gagagcagta gccccatctg agtgttgctg ggaaatatgt gcctttattt 121 ttctagagag aaaaacaaaa ctaagctaaa ctatacaaaa caaaaacaac ttacactttg 181 tgataatggg agacattgct tcattggtca atactgttta ttatacaaac accctgggaa 241 agataatctg tctgaaacaa ggtgacagag ttttttctac tgggcaagac aggcagaaac 301 atgaaagaaa ctagagaccc agggtttggg tagatactca gtacacattg gttaataaag 361 aatcaatcct ttggattatt tactaccatt attttaattt tccaatgcat aagttaggca 421 ataggaaagt gaaccaattt cctagaggca tgcagctaat ctggtcagta cacacagccc 481 cgggacacag gagacagaac tgaactctcc ttatcttgta ccccaccctg gcaccagcct 541 atcaggactt aaggaataca cagcagataa agagacaacg gggggggggg gtgaaggacc 601 aagaattgga gcagaagaat ggaagaaaag gaagaatgga aatcctgttt gagttctgca 661 tgtctgccca tccattcaga actactgaag agacaaagga gacctttgac ttcccaaaca 721 gagaagaaaa cctcacccca ggaaggcttt cctaaaagag gatgtcagga aatgcagcta 781 atttgctttt cctggaagaa tttgggtcca aagttttctg cccttcttcc tacctaggtt 841 acattttccc cagcctggag gccacacaag tcaatcaata accaaagata cctattatag 901 ggcacagtgg gtggagcctg tattaccatc tgcctatatg accactcctc agtttctgaa 961 gagaagcacc ctgtatagtt // LOCUS MVTRR5S 120 bp ss-rRNA BCT 02-AUG-1990 DEFINITION M.thermolithotrophicus 5S ribosomal RNA. ACCESSION M34911 KEYWORDS 5S ribosomal RNA. SOURCE M.thermolithotrophicus (strain DSM 2095) rRNA. ORGANISM Methanococcus thermolithotrophicus Prokaryota; Bacteria; Mendosicutes; Archaeobacteria; Methanococcales; Methanococcaceae. REFERENCE 1 (bases 1 to 120) AUTHORS Willekens,P., Stetter,K.O., Vandenberghe,A., Huysmans,E. and De Wachter,R. TITLE The structure of 5S ribosomal RNA in the methanogenic archaebacteria Methanolobus tindarius and Methanococcus thermolithotrophicus JOURNAL FEBS Lett. 204, 273-278 (1986) STANDARD simple staff_review FEATURES from to/span description rRNA 1 120 5S ribosomal RNA BASE COUNT 30 a 33 c 31 g 26 t ORIGIN 1 tgatataacg gtcatagcgg aggagccaca tccgatcccg tcccgatctc ggaaattaag 61 ccctccagcg ataccctaag tactgccatt tggtgggaac agggtgacgc tgttgatcac // LOCUS SF6LYZ 996 bp ds-DNA PHG 02-AUG-1990 DEFINITION Bacteriophage SF6 fragment D lysozyme gene, complete cds. ACCESSION M35825 KEYWORDS lysozyme. SOURCE Bacteriophage SF6 DNA. ORGANISM Bacteriophage SF6 Viridae; ds-DNA viruses. REFERENCE 1 (bases 1 to 996) AUTHORS Verma,M. TITLE Molecular cloning and sequencing of lysozyme gene of bacteriophage SF6 of Bacillus subtilis JOURNAL Curr. Microbiol. 13, 299-301 (1986) STANDARD simple staff_review FEATURES from to/span description pept 13 963 lysozyme BASE COUNT 284 a 223 c 243 g 246 t ORIGIN 1 ctgcagatcg taatggatcc tcgcctacgt gaagaagtag tacggctgat aatcgcatta 61 acgagtgata atggagcatc actgtcaaaa cggcttcaat caagggtctc ggcgctcgag 121 aagacgtctc aaatacactc tgatactatc ctccggatca cccagggact cgatgatgca 181 aacaaacgaa tcatcgctct tgagcaaagt cgggatgact tggttgcatc agtcagtgat 241 gctcaacttg caatctccag attggaaagc tctatcggag ccctccaaac agttgtcaat 301 ggacttgatt cgagtgttac ccagttgggt gctcgagtgg gacaacttga gacaggactt 361 gcagacgtac gcgttgatca cgacaatctc gttgcgagag tggatactgc agaacgtaac 421 attggatcat tgaccactga gctatcaact ctgacgttac gagtaacatc catacaagcg 481 gatttcgaat ctaggatatc cacgttagag cgcacggcgg tcactagcgc gggagctccc 541 ctctcaatcc gtaataaccg tataaccatg ggattaaatg atggactcac gttgtcaggg 601 aataatctcg ccatccgatt gccaggaaat acgggtctga atattcaaaa tggtggactt 661 cagtttcgat ttaatactga tcaattccag atagttaata ataacttgac tctcaagacg 721 actgtgtttg attctatcaa ctcaaggata ggcgcaactg agcaaagtta cgtggcgtcg 781 gcagtgactc ccttgagatt aaacagtagc acgaaggtgc tggatatgct aatagacatg 841 tcaacacttg aaattaattc tagtggacag ctaactgtta gatcgacatc cccgaatttg 901 aggtatccga tagctgatgt tagcggcggt atcggaatga gtccaaatta taggtttagg 961 tgaggatcag accaccccgc ggcactgggg ctgcag // LOCUS SYESC6 1071 bp ss-RNA VRL 02-AUG-1990 DEFINITION Sonchus yellow net virus M1 protein gene, complete cds. ACCESSION M35689 KEYWORDS M1 protein. SOURCE Sonchus yellow net virus RNA, clones pGL[9,32]. ORGANISM Sonchus yellow net virus Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses; Rhabdoviridae; Phytorhabdovirus. REFERENCE 1 (bases 1 to 1071) AUTHORS Hillman,B.I., Heaton,L.A., Hunter,B.G., Modrell,B. and Jackson,A.O. TITLE Structure of the gene encoding the m1 protein of sonchus yellow net virus JOURNAL Virology (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by B.I.Hillman, 28-JUN-1990. FEATURES from to/span description pept 72 932 M1 protein mRNA 1 1071 M1 mRNA BASE COUNT 403 a 197 c 235 g 236 t ORIGIN 1 aacttaaaat aataataata tcaaataatc aagcagacat aaaaacaggg ttatctctat 61 tgtatttcag aatggcaggt atatacgcag tttcaatcaa gggccatgca tcggcgatat 121 tcaaccgaca agagaaggaa atcagcacag gacgtgtttg ggaagttatg aagaagataa 181 tgtccttaaa gcctactagg gtcattatgt catattctct ccttagatca gcgttggata 241 aaagcaggca acttacccaa gaagaataca atattatgca attgatccta gacggctgtg 301 tcaaaaccct tgagcctgtt gcagccagcg ggatatgcat agatgtgaac ctgggaaaat 361 gcaccaagca cacaatccca tttggcatca caaataacga cgtaggtcac gtgtcagtag 421 tgatgacatt accatttttg gaagaaggat gttataacat aggcgcatgt tttgatggaa 481 gattgtccaa gtcaaggagc gacgcaagcc attatgctgt tgatgtaagt ctggaaattt 541 acttaaagtc attatccaga gacgaagctg aagaacaaat atccaaggga acatcagtgt 601 accctttcaa aattaatcat cctacatact ttgaagatga gactgataca tcagatggag 661 aaagtcttag tggacgagca agctcagatg atgggccaga agacggaggc cacggacatg 721 gtgataaaaa caatgagaaa aactctggga aggtggtaag gaaaaggaaa tcaaggaaag 781 agatcgatgt aggaaggttc aagatggtta aggataatat cataaacacc agatccggac 841 tgctaaaatc catgagagga acgggacatc ggaaacacag aacgcaggag atcacagaag 901 gatacaacta cggagacaag gacgcagaat gaaccaaccc accaaaagca gaaaacttgc 961 tactatataa taatatgaag agcccacaat aagatcacac aatgtcaaac agcacaactc 1021 caaatccatt aggtaatacc tgtattattc cgtgcactta tataagaaaa a // LOCUS BLYCPPSBEF 681 bp ds-DNA ORG 02-AUG-1990 DEFINITION Barley chloroplast cytochrome b-559 apoprotein (psbEF) genes, complete cds. ACCESSION M35616 KEYWORDS cytochrome b-559 apoprotein; psbE gene; psbF gene. SOURCE Barley chloroplast DNA, clones pDS6 and pDS6-RBSII. ORGANISM Chloroplast Hordeum vulgare Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae; Hordeum vulgare. REFERENCE 1 (bases 1 to 681) AUTHORS Krupinska,K. TITLE Characterization and in vitro expression of the cytochrome b-559 genes of barley. II. in vitro transcription and translation JOURNAL Carlsberg Res. Commun. 53, 233-246 (1988) STANDARD simple staff_entry FEATURES from to/span description pept 139 390 cytochrome b-559 9.4 kDa protein (psbE) pept 401 520 cytochrome b-559 4.5 kDa protein (psbF) binding 129 132 psbE ribosomal binding site (put.) binding 390 394 psbF ribosomal binding site (put.) BASE COUNT 202 a 131 c 123 g 225 t ORIGIN 1 cgactcaaaa tacacctttg gtacaaaatt gacaatctca caaggatgaa atatcagtaa 61 ttttctattt actggttgat cccatctttt acggaatcaa ttcctttttt gaatgtacaa 121 aaattttggg agttcagcat gtctggaagc acgggagaac gttcttttgc tgatattatt 181 accagtattc gatactgggt tattcatagc attactatac cttccctatt cattgcgggt 241 tggttatttg tcagtacggg tttagcttat gacgtgtttg gaagtcctag gccaaacgag 301 tatttcacgg aaagccgaca aggaattccg ttaataaccg accgttttga ttctttagaa 361 caactcgatg aatttagtag atccttttag gaggccctca atgaccatag atcgaaccta 421 tcctattttt acagtgcgat ggctggctat tcacggacta gctgtaccta ctgttttttt 481 cttgggatca atatcagcaa tgcagttcat ccaacgataa accaaattcc aactatagaa 541 ctatgacaca atcaaacccg aatgaacaaa atgttgaatt gaatcgtacc agtctatact 601 ggggtttatt actcattttt gtacttgctg ttttattttc caattacttc ttcaattgag 661 agaaagaaag agactaacaa g // LOCUS BOVIL1BA 944 bp ds-DNA MAM 02-AUG-1990 DEFINITION Bovine interleukin-1 beta mRNA, complete cds. ACCESSION M35589 KEYWORDS interleukin-1 beta. SOURCE Bovine alveolar macrophage, cDNA to mRNA. ORGANISM Bos taurus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Bovidae. REFERENCE 1 (bases 1 to 944) AUTHORS Leong,S.R., Flaggs,G.M., Lawman,M. and Gray,P.W. TITLE The nucleotide sequence for the cDNA of bovine interleukin-1 beta JOURNAL Nucleic Acids Res. 16, 9054-9054 (1988) STANDARD simple staff_entry FEATURES from to/span description pept 45 845 interleukin-1 beta precursor sigp 45 383 interleukin-1 beta signal peptide matp 384 842 interleukin-1 beta BASE COUNT 270 a 234 c 228 g 212 t ORIGIN 1 attctctcca gccaaccttc attgcccagg tttctgaaac agccatggca accgtacctg 61 aacccatcaa cgaaatgatg gcttactaca gtgacgagaa tgagctgtta tttgaggctg 121 atgaccctaa acagatgaag agctgcatcc aacacctgga cctcggttcc atgggagatg 181 gaaacatcca gctgcagatt tctcaccagt tctacaacaa aagcttcagg caggtggtgt 241 cggtcatcgt ggccatggag aagctgagga acagtgccta cgcacatgtc ttccatgatg 301 atgacctgag gagcatcctt tcattcatct ttgaagaaga gcctgtcatc ttcgaaacgt 361 cctccgacga gtttctgtgt gacgcacccg ttcagtcaat aaagtgcaaa ctccaggaca 421 gagagcaaaa atccctggtg ctggctagcc catgtgtgct gaaggctctc cacctcctct 481 cacaggaaat gaaccgagaa gtggtgttct gcatgagctt tgtgcaagga gaggaaagag 541 acaacaagat tcctgtggcc ttgggtatca aggacaagaa tctatacctg tcttgtgtga 601 aaaaaggtga tacgcccacc ctgcagctgg aggaagtaga ccccaaagtc taccccaaga 661 ggaatatgga aaagcgcttt gtcttctaca agacagaaat caagaataca gttgaatttg 721 agtctgtcct gtaccctaac tggtacatca gcacttctca aatcgaagaa aggcccgtct 781 tcctgggaca ttttcgagct ggccaggata taactgactt cagaatggaa accctctctc 841 cctaaagaaa gccataccca gggagtccac gtgggctgaa taaccccgag gactggcaga 901 agggaaggga agaatgtagc tgcagcctga acttcactgt tgtc // LOCUS ECOK88ADA 744 bp ds-DNA BCT 02-AUG-1990 DEFINITION E.coli K88ad subunit protein gene, partial cds. ACCESSION M35637 KEYWORDS K88ad subunit protein. SOURCE E.coli (K12 strain 5K) DNA, clones pFM205, pBad, pBac. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 744) AUTHORS Gaastra,W., Klemm,P. and de Graaf,F.K. TITLE The nucleotide sequence of the K88ad protein subunit of porcine enterotoxigenic Escherichia coli JOURNAL FEMS Microbiol. Lett. 18, 177-183 (1983) STANDARD simple staff_entry FEATURES from to/span description pept < 1 > 744 K88ad subunit protein (AA at 1) BASE COUNT 192 a 137 c 205 g 210 t ORIGIN 1 aatggttcgg tcgatatcgg tggtagtatc actgcagatg attatcgtca gaaatgggaa 61 tggaaagttg gtacaggtct taatggattt ggtagtgtat tgaatgacct gaccaatggt 121 ggaaccgaac tgaccattac tgttactggt aataagccaa gtttgttagg ccgaaccaga 181 gaggcatttg ctacgccagt ggttggtggt gtagatggaa ttcctcatat tgcatttact 241 gactatgaag gagcttctgt agaactcaga aaccctgatg gtgaaattga aaaaggttta 301 gcatattttg ttctgccgat gaaaaatgca gagggcacta aagttggttc agtgaaagtg 361 aatgcatctt atgccggtgc gctcgggaga ggtggggtta cttctgcgga cggggagctg 421 atgtcgcttt ttgccgaggg gtcgcacgct atcttttatg gtggtttgcc gacgaatgtt 481 cagaattctg cactcccggg tgggagtgcc gcagcggcgc gcacagagtt gtttggaagt 541 ctatcaaaaa atgatattct cggacagatt caaagagtaa acgcaaatat tacttctctt 601 gttaacgtcc caggttcttt caatgaaaac atggcgtaca ctgatggatc cgttgtttcc 661 gttgcctatg cactgggtat tgcaaaccgg cagactattg aggcaacttt taatcaggct 721 gtaactacca gcactcagtg gagc // LOCUS HUMTNFTRP 1379 bp ss-mRNA SYN 02-AUG-1990 DEFINITION Synthetic human tumor necrosis factor mRNA, complete cds. ACCESSION M35592 KEYWORDS tumor necrosis factor. SOURCE Altered human leukemic B-cell line Ball-1, cDNA to mRNA, clone pM324-346. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 1379) AUTHORS Nobuhara,M., Kanamori,T., Nagase,Y., Nii,A., Morishita,H., Tohyama,J., Andoh,S. and Kurimoto,M. TITLE The expression of human tumor necrosis factor in E.coli JOURNAL Nucleic Acids Symp Ser 17, 131-134 (1986) STANDARD simple staff_entry FEATURES from to/span description pept 178 879 synthetic tumor necrosis factor precursor sigp 178 399 synthetic tumor necrosis factor signal peptide matp 400 876 synthetic tumor necrosis factor BASE COUNT 318 a 438 c 336 g 287 t ORIGIN 1 agcagacgct ccctcagcaa ggacagcaga ggaccagcta agagggagag aagcaactac 61 agaccccccc tgaaaacaaa aatcagacgc cacatcccct gacaagctgc caggcaggtt 121 ctcttcctct cacatactga cccacggctc caccctctct cccctggaaa ggacaccatg 181 agcactgaaa gcatgatccg ggacgtggag ctggccgagg aggcgctccc caagaagaca 241 ggggggcccc agggctccag gcggtgcttg ttcctcagcc tcttctcctt cctgatcgtg 301 gcaggcgcca ccacgctctt ctgcctgctg cactttggag tgatgggccc ccagagggaa 361 gagttcccca gggacctctc tctaatcagc cctctggccc aggcagtcag atcatcttct 421 cgaaccccga gtgacaagcc tgtagcccat gttgtagcaa accctcaagc tgaggggcag 481 ctccagtggc tgaaccgccg ggccaatgcc ctcctggcca atggcgtgga gctgagagat 541 aaccagctgg tggtgccatc agagggcctg tacctcatct actcccaggt cctcttcaag 601 ggccaaggct gcccctccac ccatgtgctc ctcacccaca ccatcagccg catcgccgtc 661 tcctaccaga ccaaggtcaa cctcctctct gccatcaaga gcccctgcca gagggagacc 721 ccagaggggg ctgaggccaa gccctggtat gagcccatct atctgggagg ggtcttccag 781 ctggagaagg gtgaccgact cagcgctgag atcaatcggc ccgactatct cgactttgcc 841 gagtctgggc aggtctactt tgggatcatt gccctgtgag gaggacgaac atccaacctt 901 cccaaacgcc tcccctgtcc caatcccttt attaccccct ccttcagaca ccctcaacct 961 cttctggctc aaaaagagaa ttgggggctt agggtcggaa cccaagctta gaactttaag 1021 caacaagacc accacttcga aacctgggat tcaggaatgt gtggcctgca cagtgaaggt 1081 gctggcaacc actaagaatt caaactgggg cctccagaac tcactggggc ctacagcttt 1141 gatccctgac atctggaatc tggagaccag ggagcctttg gttctgacca gaatgctgca 1201 ggacttgaga agacctcacc tagaaattga cacaagtgga ccttaggcct tcctctctcc 1261 agatgtttcc agacttcctt gagacacgga gcccagccct ccccatggag ccagctccct 1321 ctatttatgt ttgcacttgt gattatttat tatttattta ttatttattt atttacaga // LOCUS SHREF1BA 694 bp ss-mRNA INV 02-AUG-1990 DEFINITION A.salina elongation factor 1-beta mRNA, complete cds. ACCESSION M35636 KEYWORDS elongation factor 1-beta. SOURCE A.salina cyst, cDNA to mRNA, clones B[4,27]. ORGANISM Artemia salina Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Branchiopoda; Sarsostraca; Anostraca; Artimiidae. REFERENCE 1 (bases 1 to 694) AUTHORS Maessen,G.D.F., Amons,R., Maassen,J.A. and Moeller,W. TITLE Primary structure of elongation factor 1-beta from Artemia JOURNAL FEBS Lett. 208, 77-83 (1986) STANDARD simple staff_entry FEATURES from to/span description pept 26 649 elongation factor 1-beta signal 677 682 polyA signal BASE COUNT 240 a 117 c 150 g 187 t ORIGIN 1 ttttctgctg taaaaaaaga tcaaaatggc caatattgac ctaaaagccg aaaagggaca 61 ggaacaacta aacgagcttt tggccaacaa gagttacctt caaggatatg aaccatccca 121 agaggatgtt gctgccttca atcagctaaa taaagccccg tctgacaaat ttccttactt 181 gcttcgatgg tacaagcaca ttagttcttt ttccgatgca gaaaagaaag gatttcccgg 241 tattccaact tctgcatcca aagaagaaga tgatgatgtt gatctttttg gatcagatga 301 ggaagatgaa gaagctgaaa aaatcaaggc agaaaggatg aaggcctata gtgataagaa 361 gtcaaagaaa cctgcaattg ttgccaaatc ctctgtcatt ttggatataa agccatggga 421 cgacgaaacg gatatggcag aaatggagaa actagttcga agtgtacaaa tggatggtct 481 tgtctggggt gcagctaaac ttattcccct tgcatatgga attaagaagc tatcaatcat 541 gtgtgttgta gaagatgata aagtatccat tgacgaactt caagaaaaaa tttctgaatt 601 tgaagacttt gtccagtctg tggatattgc cgctttcaac aaagtttaat tcttaattaa 661 ttacttgtga gaagggaata aatcagggca attg // LOCUS YSCRO18SA 813 bp ds-DNA PLN 02-AUG-1990 DEFINITION Yeast (S.cerevisiae) ribosomal operon DNA with 18S rRNA, 5' end. ACCESSION M35588 KEYWORDS 18S ribosomal RNA; ribosomal operon. SOURCE Yeast (S.cerevisiae) DNA, clone pVIrA-3. ORGANISM Saccharomyces cerevisiae Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes; Endomycetales; Saccharomycetaceae. REFERENCE 1 (bases 1 to 813) AUTHORS Skryabin,K.G., Zakhar'ev,V.M., Rubtsov,P.M. and Baev,A.A. TITLE Nucleotide sequence of the presumed region of initiation of transcription of the yeast ribosomal operon JOURNAL Dokl. Biochem. 247, 288-290 (1979) STANDARD simple staff_entry FEATURES from to/span description rRNA 653 > 813 18S rRNA BASE COUNT 221 a 140 c 194 g 258 t ORIGIN 1 gaattcgagt aggcttgtcg ttcgttatgt ttttgtaaat ggcctcgtca aacggtggag 61 agagtcgcta ggtgatcgtc agatctgcct agtctctata cagcgtgttt aattgacatg 121 ggttgatgcg tattgagaga tacaatttgg gaagaaattc ccagagtgtg tttcttttgc 181 gtttaacctg aacagtctca tcgtgggcat cttgcgattc cattggtgag cagcgaagga 241 tttggtggat tactagctaa tagcaatcta tttcaaagaa ttcaaacttg ggggaatgcc 301 ttgttgaata gccggtcgca agacgtgatt cttgaagtgt aacctcctct caaatcagcg 361 atatcaaacg taccattccg tgaacaccgg ggtatctgtt tggtggaacc tgattagagg 421 aaactcaaag agtgctatgg tatggtgacg gagtgcgctg gtcaagagcg taagcttttg 481 aacagagagc atttccggca gcagagagac ccgaaaaagc aatttttctg gaatttcagc 541 tgtttccaaa ctcaataagt atcttctagc aagagggaat aggtgggaaa aaaaaaaaga 601 gatttcggtt tctttctttt ttactgcttg ttgcttcttc ttttaagata gttatctggt 661 tgatcctgcc agtagtcata tgcttgtctc aaagattaag ccatgcatgt ctaagtataa 721 gcaatttata cagtgaaact gcgaatggct cattaaatca gttatcgttt atttgatagt 781 tcctttacta catggtataa ctgtggtaat tct // LOCUS YSJLEU2A 968 bp ds-DNA PLN 02-AUG-1990 DEFINITION Y.lipolytica beta-isopropylmalate dehydrogenase (LEU2) gene, 5' end. ACCESSION M35579 KEYWORDS beta-isopropylmalate dehydrogenase. SOURCE Y.lipolytica (strain 21109-9) DNA, clone pINA92. ORGANISM Yarrowia lipolytica Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes; Endomycetales; Saccharomycetaceae. REFERENCE 1 (bases 1 to 968) AUTHORS Gaillardin,C. and Ribet,A.-M. TITLE LEU2 directed expression of beta-galactosidase activity and phleomycin resistance in Yarrowia lipolytica JOURNAL Curr. Genet. 11, 369-375 (1987) STANDARD simple staff_entry FEATURES from to/span description pept 291 > 968 beta-isopropylmalate dehydrogenase (LEU2) signal 163 172 CAAT box signal 213 223 TATA box BASE COUNT 215 a 303 c 242 g 208 t ORIGIN 1 gaattccgtc gtcgcctgag tcatcattta tttaccagtt ggccacaaac ccttgacgat 61 ctcgtatgtc ccctccgaca tactcccggc cggctgggta cgttcgatag cgctatcggc 121 atcgacaagg tttgggtccc tagccgatac cgcactacct gagtcacaat cttcggaggt 181 ttagtcttcc acatagcacg ggcaaaagtg cgtatatata caagagcgtt tgccagccac 241 agattttcac tccacacacc acatcacaca tacaaccaca cacatccaca atggaacccg 301 aaactaagaa gaccaagact gactccaaga agattgttct tctcggcggc gacttctgtg 361 gccccgaggt gattgccgag gccgtcaagg tgctcaagtc tgttgctgag gcctccggca 421 ccgagtttgt gttcgaggac cgactcattg gaggagctgc cattgagaag gagggcgagc 481 ccatcaccga cgctactctc gacatctgcc gaaaggctga ctctattatg ctcggtgctg 541 tcggaggcgc tgccaacacc gtatggacca ctcccgacgg acgaaccgac gtgcgacccg 601 agcagggtct cctcaagctg cgaaaggacc tgaacctgta cgccaacctg cgaccctgcc 661 agctgctgtc gcccaagctc gccgatctct cccccatccg aaacgttgag ggcaccgact 721 tcatcattgt ccgagagctc gtcggaggta tctactttgg agagcgaaag gaggatgacg 781 gatctggcgt cgcttccgac accgagacct actccgttcc tgaggttgag cgaattgccc 841 gaatggccgc cttcctggcc cttcagcata acccccctct tcccgtgtgg tctcttgaca 901 aggccaacgt gctggcctcc tctcgacttt ggcgaaagac tgttactcga gtcctcaagg 961 acgaattc // LOCUS YSTARSA1 131 bp ds-DNA PLN 02-AUG-1990 DEFINITION Yeast ARS site linked to HML locus, segment 1. ACCESSION M17505 KEYWORDS autonomous replication; origin of replication. SEGMENT 1 of 2 SOURCE Yeast DNA. ORGANISM Yeast sp. Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina. REFERENCE 1 (bases 1 to 131) AUTHORS Broach,J.R., Li,Y.-Y., Feldman,J., Jayaram,M., Abraham,J., Nasmyth,K.A. and Hicks,J.B. TITLE Localization and sequence analysis of yeast origins of DNA replication JOURNAL Cold Spring Harb. Symp. Quant. Biol. 47, 1165-1173 (1983) STANDARD simple staff_entry FEATURES from to/span description site 92 101 ARS consensus sequence BASE COUNT 41 a 14 c 19 g 57 t ORIGIN Chromosome III. 1 atggaatgta atttcttaag tattctatat gtacttaaaa cctattaata tatggatcaa 61 cacagtatct tatgaatggg tttttgattt ttttatgttt ttttaaaaca ttaaagtttt 121 cggcacggac t // LOCUS YSTARSA2 146 bp ds-DNA PLN 02-AUG-1990 DEFINITION Yeast ARS site linked to HML locus, segment 2. ACCESSION M17506 KEYWORDS autonomous replication; origin of replication. SEGMENT 2 of 2 SOURCE Yeast DNA. ORGANISM Yeast sp. Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina. REFERENCE 1 (bases 1 to 146) AUTHORS Broach,J.R., Li,Y.-Y., Feldman,J., Jayaram,M., Abraham,J., Nasmyth,K.A. and Hicks,J.B. TITLE Localization and sequence analysis of yeast origins of DNA replication JOURNAL Cold Spring Harb. Symp. Quant. Biol. 47, 1165-1173 (1983) STANDARD simple staff_entry FEATURES from to/span description site 136 146 ARS consensus sequence BASE COUNT 46 a 22 c 21 g 57 t ORIGIN Chromosome III; about 2.8 kb downstream of of segment 1. 1 cttctatgtt acttcttcaa catgaaagcc cgaacgtttg caatgatatc ctctttttca 61 cccgattatt ttcatttatt aagtaagtgg ggttctgggt gaaaaaatca aaacaaaaat 121 atgaatttgt aatgattttt atattt // LOCUS YSTARSB1 147 bp ds-DNA PLN 02-AUG-1990 DEFINITION Yeast ARS site linked to HMR locus, segment 1. ACCESSION M17507 KEYWORDS autonomous replication; origin of replication. SEGMENT 1 of 2 SOURCE Yeast DNA. ORGANISM Yeast sp. Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina. REFERENCE 1 (bases 1 to 147) AUTHORS Broach,J.R., Li,Y.-Y., Feldman,J., Jayaram,M., Abraham,J., Nasmyth,K.A. and Hicks,J.B. TITLE Localization and sequence analysis of yeast origins of DNA replication JOURNAL Cold Spring Harb. Symp. Quant. Biol. 47, 1165-1173 (1983) STANDARD simple staff_entry FEATURES from to/span description site 112 122 ARS consensus sequence BASE COUNT 56 a 14 c 9 g 68 t ORIGIN Chromosome III. 1 aatagtatca atatatatat atatatatat atttatttgt ttactttttc tatcagtgtt 61 ttcaattttt tattaaacaa tgtttgattt tttaaatcgc aatttaatac ctaaatataa 121 aaaatgttat tatattgcaa aaaccca // LOCUS YSTARSB2 85 bp ds-DNA PLN 02-AUG-1990 DEFINITION Yeast ARS site linked to HMR locus, segment 2. ACCESSION M17508 KEYWORDS autonomous replication; origin of replication. SEGMENT 2 of 2 SOURCE Yeast DNA. ORGANISM Yeast sp. Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina. REFERENCE 1 (bases 1 to 85) AUTHORS Broach,J.R., Li,Y.-Y., Feldman,J., Jayaram,M., Abraham,J., Nasmyth,K.A. and Hicks,J.B. TITLE Localization and sequence analysis of yeast origins of DNA replication JOURNAL Cold Spring Harb. Symp. Quant. Biol. 47, 1165-1173 (1983) STANDARD simple staff_entry FEATURES from to/span description site 63 73 ARS consensus sequence BASE COUNT 33 a 7 c 5 g 40 t ORIGIN Chromosome III; about 1.9 kb downstream of segment 1. 1 atttatcatg ttttggtatg ataatttaat ttttaaaaaa acaaatttaa ttgacctcat 61 taattaatat ttattaatac cttta // LOCUS HUMROS1 7375 bp ss-mRNA PRI 02-AUG-1990 DEFINITION Human transmembrane tyrosine-specific protein kinase (ROS1) mRNA, complete cds. ACCESSION M34353 KEYWORDS oncogene; transmembrane tyrosine-specific protein kinase. SOURCE Human glioblastoma cell line SW-1088, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 7375) AUTHORS Birchmeier,C., O'Neil,K., Riggs,M. and Wigler,M. TITLE Characterization of ROS1 cDNA from a human glioblastoma cell line JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 4799-4803 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.H.Wigler, 15-MAY-1990. FEATURES from to/span description pept 207 7250 transmembrane tyrosine-specific protein kinase precursor /hgml_locus_uid="LN0124W" /nomgen="ROS1" /map="6q21-q22" sigp 207 314 transmembrane tyrosine-specific protein kinase signal peptide matp 208 7247 transmembrane tyrosine-specific protein kinase BASE COUNT 2203 a 1496 c 1605 g 2071 t ORIGIN 1 ccgcattcaa gctttcaagc attcaaaggt ctaaatgaaa aaggctaagt attatttcaa 61 aaggcaagta tatcctaata tagcaaaaca aacaaagcaa aatccatcag ctactcctcc 121 aattgaagtg atgaagccca aataattcat atagcaaaat ggagaaaatt agaccggcca 181 tctaaaaatc tgccattggt gaagtgatga agaacattta ctgtcttatt ccgaagcttg 241 tcaattttgc aactcttggc tgcctatgga tttctgtggt gcagtgtaca gttttaaata 301 gctgcctaaa gtcgtgtgta actaatctgg gccagcagct tgaccttggc acaccacata 361 atctgagtga accgtgtatc caaggatgtc acttttggaa ctctgtagat cagaaaaact 421 gtgctttaaa gtgtcgggag tcgtgtgagg ttggctgtag cagcgcggaa ggtgcatatg 481 aagaggaagt actggaaaat gcagacctac caactgctcc ctttgcttct tccattggaa 541 gccacaatat gacattacga tggaaatctg caaacttctc tggagtaaaa tacatcattc 601 agtggaaata tgcacaactt ctgggaagct ggacttatac taagactgtg tccagaccgt 661 cctatgtggt caagcccctg caccccttca ctgagtacat tttccgagtg gtttggatct 721 tcacagcgca gctgcagctc tactcccctc caagtcccag ttacaggact catcctcatg 781 gagttcctga aactgcacct ttgattagga atattgagag ctcaagtccc gacactgtgg 841 aagtcagctg ggatccacct caattcccag gtggacctat tttgggttat aacttaaggc 901 tgatcagcaa aaatcaaaaa ttagatgcag ggacacagag aaccagtttc cagttttact 961 ccactttacc aaatactatc tacaggtttt ctattgcagc agtaaatgaa gttggtgagg 1021 gtccagaagc agaatctagt attaccactt catcttcagc agttcaacaa gaggaacagt 1081 ggctcttttt atccagaaaa acttctctaa gaaagagatc tttaaaacat ttagtagatg 1141 aagcacattg ccttcggttg gatgctatat accataatat tacaggaata tctgttgatg 1201 tccaccagca aattgtttat ttctctgaag gaactctcat atgggcgaag aaggctgcca 1261 acatgtctga tgtatctgac ctgagaattt tttacagagg ttcaggatta atttcttcta 1321 tctccataga ttggctttat caaagaatgt atttcatcat ggatgaactg gtatgtgtct 1381 gtgatttaga gaactgctca aacatcgagg aaattactcc accctctatt agtgcacctc 1441 aaaaaattgt ggctgattca tacaatgggt atgtctttta cctcctgaga gatggcattt 1501 atagagcaga ccttcctgta ccatctggcc ggtgtgcaga agctgtgcgt attgtggaga 1561 gttgcacgtt aaaggacttt gcaatcaagc cacaagccaa gcgaatcatt tacttcaatg 1621 acactgccca agtcttcatg tcaacatttc tggatggctc tgcttcccat ctcatcctac 1681 ctcgcatccc ctttgctgat gtgaaaagtt ttgcttgtga aaacaatgac tttcttgtca 1741 cagatggcaa ggtcattttc caacaggatg ctttgtcttt taatgaattc atcgtgggat 1801 gtgacctgag tcacatagaa gaatttgggt ttggtaactt ggtcatcttt ggctcatcct 1861 cccagctgca ccctctgcca ggccgcccgc aggagctttc ggtgctgttt ggctctcacc 1921 aggctcttgt tcaatggaag cctcctgccc ttgccatagg agccaatgtc atcctgatca 1981 gtgatattat tgaactcttt gaattaggcc cttctgcctg gcagaactgg acctatgagg 2041 tgaaagtatc cacccaagac cctcctgaag tcactcatat tttcttgaac ataagtggaa 2101 ccatgctgaa tgtacctgag ctgcagagtg ctatgaaata caaggtttct gtgagagcaa 2161 gttctccaaa gaggccaggc ccctggtcag agccctcagt gggtactacc ctggtgccag 2221 ctagtgaacc accatttatc atggctgtga aagaagatgg gctttggagt aaaccattaa 2281 atagctttgg cccaggagag ttcttatcct ctgatatagg aaatgtgtca gacatggatt 2341 ggtataacaa cagcctctac tacagtgaca cgaaaggcga cgtttttgtg tggctgctga 2401 atgggacgga tatctcagag aattatcacc tacccagcat tgcaggagca ggggctttag 2461 cttttgagtg gctgggtcac tttctctact gggctggaaa gacatatgtg atacaaaggc 2521 agtctgtgtt gacgggacac acagacattg ttacccacgt gaagctattg gtgaatgaca 2581 tggtggtgga ttcagttggt ggatatctct actggaccac actctattca gtggaaagca 2641 ccagactaaa tggggaaagt tcccttgtac tacagacaca gccttggttt tctgggaaaa 2701 aggtaattgc tctaacttta gacctcagtg atgggctcct gtattggttg gttcaagaca 2761 gtcaatgtat tcacctgtac acagctgttc ttcggggaca gagcactggg gataccacca 2821 tcacagaatt tgcagcctgg agtacttctg aaatttccca gaatgcactg atgtactata 2881 gtggtcggct gttctggatc aatggcttta ggattatcac aactcaagaa ataggtcaga 2941 aaaccagtgt ctctgttttg gaaccagcca gatttaatca gttcacaatt attcagacat 3001 cccttaagcc cctgccaggg aacttttcct ttacccctaa ggttattcca gattctgttc 3061 aagagtcttc atttaggatt gaaggaaatg cttcaagttt tcaaatcctg tggaatggtc 3121 cccctgcggt agactggggt gtagttttct acagtgtaga atttagtgct cattctaagt 3181 tcttggctag tgaacaacac tctttacctg tatttactgt ggaaggactg gaaccttatg 3241 ccttatttaa tctttctgtc actccttata cctactgggg aaagggcccc aaaacatctc 3301 tgtcacttcg agcacctgaa acagttccat cagcaccaga gaaccccaga atatttatat 3361 taccaagtgg aaaatgctgc aacaagaatg aagttgtggt ggaatttagg tggaacaaac 3421 ctaagcatga aaatggggtg ttaacaaaat ttgaaatttt ctacaatata tccaatcaaa 3481 gtattacaaa caaaacatgt gaagactgga ttgctgtcaa tgtcactccc tcagtgatgt 3541 cttttcaact tgaaggcatg agtcccagat gctttattgc cttccaggtt agggccttta 3601 catctaaggg gccaggacca tatgctgacg ttgtaaagtc tacaacatca gaaatcaacc 3661 catttcctca cctcataact cttcttggta acaagatagt ttttttagat atggatcaaa 3721 atcaagttgt gtggacgttt tcagcagaaa gagttatcag tgccgtttgc tacacagctg 3781 ataatgagat gggatattat gctgaagggg actcactctt tcttctgcac ttgcacaatc 3841 gctctagctc tgagcttttc caagattcac tggtttttga tatcacagtt attacaattg 3901 actggatttc aaggcacctc tactttgcac tgaaagaatc acaaaatgga atgcaagtat 3961 ttgatgttga tcttgaacac aaggtgaaat atcccagaga ggtgaagatt cacaatagga 4021 attcaacaat aatttctttt tctgtatatc ctcttttaag tcgcttgtat tggacagaag 4081 tttccaattt tggctaccag atgttctact acagtattat cagtcacacc ttgcaccgaa 4141 ttctgcaacc cacagctaca aaccaacaaa acaaaaggaa tcaatgttct tgtaatgtga 4201 ctgaatttga gttaagtgga gcaatggcta ttgatacctc taacctagag aaaccattga 4261 tatactttgc caaagcacaa gagatctggg caatggatct ggaaggctgt cagtgttgga 4321 gagttatcac agtacctgct atgctcgcag gaaaaaccct tgttagctta actgtggatg 4381 gagatcttat atactggatc atcacagcaa aggacagcac acagatttat caggcaaaga 4441 aaggaaatgg ggccatcgtt tcccaggtga aggccctaag gagtaggcat atcttggctt 4501 acagttcagt tatgcagcct tttccagata aagcgtttct gtctctagct tcagacactg 4561 tggaaccaac tatacttaat gccactaaca ctagcctcac aatcagatta cctctggcca 4621 agacaaacct cacatggtat ggcatcacca gccctactcc aacatacctg gtttattatg 4681 cagaagttaa tgacaggaaa aacagctctg acttgaaata tagaattctg gaatttcagg 4741 acagtatagc tcttattgaa gatttacaac cattttcaac atacatgata cagatagctg 4801 taaaaaatta ttattcagat cctttggaac atttaccacc aggaaaagag atttggggaa 4861 aaactaaaaa tggagtacca gaggcagtgc agctcattaa tacaactgtg cggtcagaca 4921 ccagcctcat tatatcttgg agagaatctc acaagccaaa tggacctaaa gaatcagtcc 4981 gttatcagtt ggcaatctca cacctggccc taattcctga aactcctcta agacaaagtg 5041 aatttccaaa tggaaggctc actctccttg ttactagact gtctggtgga aatatttatg 5101 tgttaaaggt tcttgcctgc cactctgagg aaatgtggtg tacagagagt catcctgtca 5161 ctgtggaaat gtttaacaca ccagagaaac cttattcctt ggttccagag aacactagtt 5221 tgcaatttaa ttggaaggct ccattgaatg ttaacctcat cagattttgg gttgagctac 5281 agaagtggaa atacaatgag ttttaccatg ttaaaacttc atgcagccaa ggtcctgctt 5341 atgtctgtaa tatcacaaat ctacaacctt atacttcata taatgtcaga gtagtggtgg 5401 tttataagac gggagaaaat agcacctcac ttccagaaag ctttaagaca aaagctggag 5461 tcccaaataa accaggcatt cccaaattac tagaagggag taaaaattca atacagtggg 5521 agaaagctga agataatgga tgtagaatta catactatat ccttgagata agaaagagca 5581 cttcaaataa tttacagaac cagaatttaa ggtggaagat gacatttaat ggatcctgca 5641 gtagtgtttg cacatggaag tccaaaaacc tgaaaggaat atttcagttc agagtagtag 5701 ctgcaaataa tctagggttt ggtgaatata gtggaatcag tgagaatatt atattagttg 5761 gagatgattt ttggatacca gaaacaagtt tcatacttac tattatagtt ggaatatttc 5821 tggttgttac aatcccactg acctttgtct ggcatagaag attaaagaat caaaaaagtg 5881 ccaaggaagg ggtgacagtg cttataaacg aagacaaaga gttggctgag ctgcgaggtc 5941 tggcagccgg agtaggcctg gctaatgcct gctatgcaat acatactctt ccaacccaag 6001 aggagattga aaatcttcct gccttccctc gggaaaaact gactctgcgt ctcttgctgg 6061 gaagtggagc ctttggagaa gtgtatgaag gaacagcagt ggacatctta ggagttggaa 6121 gtggagaaat caaagtagca gtgaagactt tgaagaaggg ttccacagac caggagaaga 6181 ttgaattcct gaaggaggca catctgatga gcaaatttaa tcatcccaac attctgaagc 6241 agcttggagt ttgtctgctg aatgaacccc aatacattat cctggaactg atggagggag 6301 gagaccttct tacttatttg cgtaaagccc ggatggcaac gttttatggt cctttactca 6361 ccttggttga ccttgtagac ctgtgtgtag atatttcaaa aggctgtgtc tacttggaac 6421 ggatgcattt cattcacagg gatctggcag ctcgaaattg ccttgtttcc gtgaaagact 6481 ataccagtcc acggatagtg aagattggag actttggact cgccagagac atctataaaa 6541 atgattacta tagaaagaga ggggaaggcc tgctcccagt tcggtggatg gctccagaaa 6601 gtttgatgga tggaatcttc actactcaat ctgatgtatg gtcttttgga attctgattt 6661 gggagatttt aactcttggt catcagcctt atccagctca ttccaacctt gatgtgttaa 6721 actatgtgca aacaggaggg agactggagc caccaagaaa ttgtcctgat gatctgtgga 6781 atttaatgac ccagtgctgg gctcaagaac ccgaccaaag acctactttt catagaattc 6841 agaaccaact tcagttattc agaaattttt tcttaaatag catttatcag tgcagagatg 6901 aagcaaacaa cagtggagtc ataaatgaaa gctttgaagg tgaagatggc gatgtgattt 6961 gtttgaattc agatgacatt atgccagttg ttttaatgga aacgaagaac cgagaagggt 7021 taaactatat ggtacttgct acagaatgtg gccaaggtga agaaaagtct gagggtcctc 7081 taggctccca ggaatctgaa tcttgtggtc tgaggaaaga agagaaggaa ccacatgcag 7141 acaaagattt ctgccaagaa aaacaagtgg cttactgccc ttctggcaag cctgaaggcc 7201 tgaactatgc ctgtctcact cacagtggat atggagatgg gtctgattaa tagcgttgtt 7261 tgggaaatag agagttgaga taaacactct cattcagtag ttactgaaag aaaactctgc 7321 tagaatgata aatgtcatgg tggtctataa ctccaaataa acaatgcaac gttcc // LOCUS MBOPIVML 969 bp ds-DNA BCT 02-AUG-1990 DEFINITION M.lacunata pilin gene inverting protein (PivML) gene, complete cds. ACCESSION M34367 KEYWORDS pilin gene inverting protein. SOURCE M.lacunata (ATCC 17956) DNA, clone pMxL1. ORGANISM Moraxella lacunata Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 969) AUTHORS Marrs,C.F., Rozsa,F.W., Hackel,M., Stevens,S.P. and Glasgow,A.C. TITLE Identification, cloning and sequencing of Piv, a new gene involved in inverting the pilin gene of M.lacunata JOURNAL J. Bacteriol. 172, 4370-4377 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by C.F.Marrs, 17-MAY-1990. FEATURES from to/span description pept 1 969 pilin gene inverting protein (PivML) BASE COUNT 318 a 236 c 165 g 250 t ORIGIN 1 atgtctaaaa cttacattgg gattgatatc gccaaaaaca catttgatgc ctgctttatt 61 acccataaca cttggcaaaa ctgtacattc acaaataacc aacagggttt tatagagcta 121 acattgtgga ttcaagcaca tcattataac acatctacct tacatttgat tattgaggca 181 acgggggctt attgggaaaa attagctcat tgggcaatct ctcatcatca taaggtaagt 241 attgtcaacc ccttatatat tcatgcatac gccaaaagcc taggcatacg caccaagaca 301 gataagcagg atgccattct cttggcacgc tatggtgcaa aagaaaatcc acctttatgg 361 cagcctaaat cagacaacga aataaaactg actgcccttc taaaacaacg tgaacaccac 421 aaacggcaac tcatcaaaga acgcactcga caggaagctc tgtctattta tgtgaaatcg 481 tatactgatg acaacattcg tcattggagt gacagcatca cacagctcga tcatcaaatt 541 tggcaactca tcaattgcac gcccgagcta aattaccgtg ccagcctact tgccacaata 601 cctggaattg gcaaaaagac actgccacat ctactggttg tcattggaga tggttcatca 661 tttcaaagtg ccaaacatct agcaagctat gctgggcttg cccctcgtca tcatcaatca 721 ggcattagta ttcacaagca gtcttccatt ggatttagtg gacaaaaaga actacgttca 781 gcccttttta tgcccgctgt catagtcagc tttggtcgat atcccgcttt tcaaaagttc 841 gtcaaacgca tggaacaaaa aggcaaaacc aaaaaacaaa ttattatcgc catcatgcgc 901 aaattactca ccatcagcta tgccgttatt cgccaaaatc gcccttttga caaacgcatt 961 catgaataa // LOCUS STYMKAD 915 bp ds-DNA BCT 02-AUG-1990 DEFINITION Plasmid pEX102 mouse killing agent D (mkaD) gene, complete cds. ACCESSION M34355 KEYWORDS mouse killing agent D. SOURCE Plasmid pEX102 (from Salmonella typhimurium, strain TML R66) DNA. ORGANISM Plasmid pEX102 Prokaryota; Bacteria. REFERENCE 1 (bases 1 to 915) AUTHORS Taira,S. and Rhen,M. TITLE Nucleotide sequence of mkaD, a virulence associated gene of Salmonella typhimurium containing variable and constant region JOURNAL Gene (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.P.Taira, 16-MAY-1990. FEATURES from to/span description pept 132 857 mouse killing agent D (mkaD) BASE COUNT 273 a 181 c 213 g 248 t ORIGIN 1 ggaccgaaat atcatttttt cgcctgataa aaaatgaggt tttctggata actaatcgtt 61 ttattaaaaa aaaactgaga atttatatct aataatatgg cgatatatcc atatcgcaaa 121 ggagatttcc catgcccata aataggccta atctaaatct aaacatccct cctttgaata 181 ttgtagctgc ttatgatggg gcggaaatac catctacaaa taagcacctg aaaaataatt 241 tcaactcctt gcacaaccaa atgcggaaga tgccggtatc ccactttaaa gaggcgctgg 301 atgtgcctga ctattcaggg atgcgccaga gtggtttctt tgctatgagc caaggttttc 361 agctgaataa ccatggttac gatgttttca tccatgctcg tcgagaatca cctcagtctc 421 agggcaaatt tgccggtgac aagttccaca tcagtgtgct cagggatatg gtgccacaag 481 catttcaagc gctgtccgga ttgctgtttt cagaggacag tccggtagat aagtggaaag 541 tgaccgatat ggagaaggtc gttcaacaag cccgtgttag cctgggcgct cagttcacgt 601 tgtatataaa accagaccag gaaaattcgc agtacagtgc gtcgtttctc cacaagacac 661 ggcaatttat agagtgtctg gaatccagac tatccgaaaa tggggttatt tcaggacagt 721 gtcctgagtc agacgttcat cctgaaaatt ggaaatatct cagttatcgt aatgaactac 781 gaagtgggcg tgatggtggc gaaatgcaga gacaggcttt acgtgaggaa ccgttttatc 841 gtttgatgac agagtaagta tgggtttggg gagcaacgga acagtaaacg ccgttaaaca 901 gctattttaa atgct // LOCUS TOBEXT 3994 bp ds-DNA PLN 02-AUG-1990 DEFINITION N.plumbaginifolia extensin (ext) gene, complete cds. ACCESSION M34371 KEYWORDS cell wall protein; extensin. SOURCE N.plumbaginifolia leaf DNA. ORGANISM Nicotiana plumbaginifolia Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Asteridae; Solanales; Solanaceae. REFERENCE 1 (bases 1 to 3994) AUTHORS De Loose,M.R.R., Gheyson,G., Tire,C., Gielen,J., Villaroel,R., Genetello,C., Van Montagu,M., Depicker,A. and Inze,D. TITLE The extensin signal peptide allows secretion of heterologous proteins from protoplasts JOURNAL Unpublished (1990) STANDARD unannotated staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.R.R.De Loose, 18-MAY-1990. Author address: M.R.R.De Loose Laboratorium voor Genetika, Wetenschappen, K.L.Ledeganckstraat, Gent, Oost-Vlaanderen, BELGIUM FEATURES from to/span description pept 1590 2840 extensin precursor sigp 1590 1652 extensin signal peptide (could end at 1667) matp 1653 2837 extensin (could start at 1668) mRNA 1560 3342 extensin mRNA rpt 1740 1824 tandem 85 bp repeats rpt 1740 1758 19 bp repeats signal 1532 1537 TATA box signal 3323 3329 poly-A signal BASE COUNT 1264 a 992 c 550 g 1188 t ORIGIN 1 cgcccgggga tcctcctgga tgccattttt cctttgcttt tggatacctt ttcgcaactt 61 tagtccattg cttgaacatg gttttttcta cctcttgtct gttcccatga tgataaacta 121 tgatagctaa cattttcagt aatattggat tgaattagat atactttgaa ttattgagct 181 acaaaattcg ttgaatattt tgccctatcc cccacccaaa agaaaataat tcataccttt 241 atttggtaat aaaagtgggt cacatgcaca gtttttctcg tcttctctag attaaactct 301 ttggaaatga cctactgaaa atactacaca taaaattccc cactcccctc caagttgggg 361 gagggtgggg gttggtgggt tttttttccc cttgaatcca ttcagccggc ttatgcctcc 421 cgaggtggtg ggaggtttaa tttgaaccct taccctatag ttaatatcga aatagataat 481 acaaaggagg ggaacataaa accaaaacct ccgacaaaac atcaaagtgt aggagttcat 541 gatatacgct tgattgaaag tgcacaatgg tctttgcata ctatcaaagt atcaattggt 601 tcttgaatta tatctcttaa tataatgtat tgtgtttaat ttctctacta tcccctattt 661 tataagacta aaagatcctg acatgcttct tgaacacatg tgaaggttag ttaactggtc 721 agaagtacac aagaattaat ttgtacacct atgtttctca ccagaatgcc cataaattac 781 atcaattctt caacatcaag agatcgaaaa acttaacaat tgttctaata gttgaactga 841 gtcgtccgat ccatatccga ttcttcacta gaagcattaa tcatatagag caatttaact 901 taatttacta tattggtaat catttacata gttaagttat aaaaccttgg agcgacacaa 961 ggatttacac taatcatgat tgaatattaa ctttactcaa tttatcaatg tctgatacaa 1021 gtgaattaat ttctctcttt gtgatttcgg tagaaaatta atgtcaagtt tcaaagtttt 1081 tctttttgaa attagtcata catgtgaata gaacattaat ttaagttaaa gaatcatata 1141 aaaaagttag ccgctttgat ttctgtaact gaaatcgtgc agagatgagg catccacact 1201 tgtttttcaa agcttcagta ctatttaaaa acaaagacag taaaaaggag actttttctt 1261 tgacattatt gcatcagaaa tagtatagct gccataatag tttattcctt tgcttagctt 1321 gcagcctcta tcaaacaaaa aaatacacca gctcaagtca atttgagccg acaacatgac 1381 aaaaccaaat caaatatgca tttttttttt tttttttttt tttttttttt tttttttttt 1441 tttacacttt ggtaggtgtt aagtaatcta gtgagacttt taccttcatt tatgaaaatc 1501 ttgaaaaggg taattgtcta attgaaagct atataaaggg gtcgaagtga agcttaagag 1561 gacaacaact tttctcattt gtttcaaaga tgggaaaaat ggcttctcta tttgccacat 1621 ttttagtggt tttagtgtca cttagcttag cttctgaaag ctcagcaaat tatcaatact 1681 catctccacc accacctaag aagccatacc acccttcacc aacaccatat tatcctgcac 1741 cagtttataa atctccacca ccaccaattc cggtttataa gtcaccacca ccacccaaga 1801 agccatacta ccctccacac accccagttt acaaatctcc accaccacca actccagttt 1861 acaagtcgcc accaccaccc aagaagccac actaccctcc acacacaccc gtttacaagt 1921 ctccaccacc acctactcca gtttacaagt caccaccatc acccaagaag ccacactatc 1981 ctccacacac tccggtttac aagtcgccac caccaccaac tcccgtttac aagtcgccac 2041 caccacccaa gaagccacac tatccaccac acaccccggt ttacaagtcg ccaccaccac 2101 caactcccgt ttacaagtcg ccaccaccac caaagaagcc acactatcct ccacacacac 2161 cagtttacaa gtcaccacca ccacccaaga agccatacta tccaccacac accccagttt 2221 acaagtcgcc accaccacca actccagttt acaagtcacc accaccacct aagaagccat 2281 accacccttc accaacaccg tatcatcctt caccagttta caagtcccct ccaccaccaa 2341 ctccagttta caagtcacca ccaccaccta agaagccata ccacccttca ccaacaccgt 2401 atcatccatc accagtttac aagtcccctc caccaccaac tccagtttac aagtcaccac 2461 caccacctaa gaagccatac cacccttcac caacaccgta tcatccatca ccagtttaca 2521 agtcccctcc accaccaact ccagtttaca agtcaccacc accacctaag aagccatacc 2581 acccttcacc aacaccgtat catcctgcac cagtttacaa gtccccacca ccaccaactc 2641 cagtttacaa gtcaccaccg ccaccagtga agccatacca tccttcacca acaccatacc 2701 atcctgcacc agtttataag tctccaccac caccaactcc tgtttacaag tcacctccac 2761 caccaactcc agtctacaag tctccaccac cacaccaccc ctatgtttac gcttctcctc 2821 ctcctcccta ccattactaa gaagtgacat cacaaagctg aaggtaatta aggcaaatta 2881 attaaaacat tttcaaaatg atatgtcagg aatgcaaaga aaattgcata actttgttta 2941 tgcaaaacat taatataata taaagaactg cgctctctgc ttattaacta tttttttagc 3001 ttcatttatt agttactagc tgttcagaat tttcagtatc ttttgatatt acaaagaacc 3061 taatcagaca atgtatattc ttatgcagga aaagcagaat gttgagctaa aagaaaggct 3121 ttttccattt tcgagaggca acgagaagaa aagaagaaga aaaaatagag taaataataa 3181 gccccacggg aggcgaagtt cttttgtagc ttcatgttgt ctaagctatt gatattgttt 3241 gtaccctata ttttatttct ctgtctttgt gtatgttttg ttcaatttcg atctccttgc 3301 aaaatgcaga gattatgagc tgaataaagt aagttaatat tattatacgt gttaattttc 3361 tactcctctc tctagccagc cttttgtttt ctctttttct tatttcattt tctttatatc 3421 aaaccatttt aggagagggc caaggagtga tccagtaaaa cacgaagatt agaagaaact 3481 tcccttcttt ttttttatct gaaaaaaatt taaagtcgag atttatctct ttttgtaatg 3541 gaatcatttc cacagttatg actattttca aattgatatc gccagaccta acaaattaaa 3601 ttactccttc cgctcatctg gccgtacact tctgctccat ctggccgtac agttctgctc 3661 catctggcag tgtacggaga atggataact taatattcag tatgaatttg gacataaaat 3721 cttctaagat tgctagtgaa ttttgtgagc gttattgtgt taaaacaaaa gacagaaaat 3781 tattagaaga attaaagaaa tatgaaaata gtatagaatc agaaatattt cgagtccaca 3841 agttttttgt gtgttcttaa ggaatgtttt aacccctcac acgttgccaa ggtaatggat 3901 taaatcctcc caagataaaa cggaataaac cttcctgcaa cagtggcaat acaaactgca 3961 ggtcgactct agggatcccc gggcgagcga attc //