Path: utzoo!attcan!uunet!crdgw1!uakari.primate.wisc.edu!zaphod.mps.ohio-state.edu!usc!snorkelwacker!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Database Update Message-ID: Date: 7 Aug 90 12:00:16 GMT Sender: root@genbank.BIO.NET Distribution: bionet Lines: 3491 Approved: lear@genbank.bio.net Checksum: 38454 188 LOCUS RATKV1AA 3291 bp ds-DNA ROD 07-AUG-1990 DEFINITION Rat potassium channel-Kv1 gene, complete cds. ACCESSION M27158 M37145 KEYWORDS potassium channel-Kv1; transmembrane protein. SOURCE Rat brain DNA and cDNA to mRNA. ORGANISM Rattus rattus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 477 to 3291) AUTHORS Swanson,R., Marshall,J., Smith,J., Williams,J., Boyle,M.B., Folander,K., Luneau,C.J., Antanavage,J., Oliva,C., Buhrow,S.A., Bennett,C., Stein,R.B. and Kaczmarek,L.M. TITLE Cloning and expression of cDNA and genomic clones encoding three delayed rectifier potassium channels in rat brain JOURNAL Neuron 4, 929-939 (1990) STANDARD full staff_entry REFERENCE 2 (bases 1 to 3291) AUTHORS Luneau,C.J. JOURNAL Unpublished (1990) STANDARD full staff_entry COMMENT Computer readable copy of sequence [1],[2] kindly submitted by R.J.Swanson, 16-AUG-1989, for release after publication. FEATURES from to/span description pept 761 2569 potassium channel-Kv1 BASE COUNT 741 a 905 c 897 g 748 t ORIGIN 1 acaatacgat agcaacatga cagttatgaa gtagcaacaa aaaataaatt tagggtgtgt 61 gtgtgggggg atggtcaaca caacatgagg aactgtatta aaggtcgaga agcactgctc 121 taaaagaaaa acataggaag gactctcttc ttcaatctct tacactggaa ctcagctaaa 181 agcctttccc ttccatctaa agcagttccc accctctggc gtcccctggc tttcagtgca 241 ttcccaggtg atctgagatc ctgaagctag ctattctcat cctgttgccc tgggagtttc 301 agcactcctg gtacaacctg ttcctcgctc ctcctgctct tttcctcctc cccttcctgt 361 cttgcggcag gggccccagc tgaaccctcc agagagacac tctccactcc gtccccaaag 421 gagaaacgcc cgggggagga gcagaggagg gagccacaga gggcggaggc cggggagctc 481 agccagagag gggctgctgg aggttgcatc tgctggaagg aggtttttcc cgctgcctgg 541 taaccagctg ccagaacact gagagggaga gagagaggca gggagcaggg gcagcagctt 601 cttgacgtca ggaccagcca aggatcgggc cagctacccc ggccagccta gagtcagcgg 661 ggccctcggc tggagaggag acctacgcga ggcttggagc gtgagttggg ggtgtgggaa 721 ccggttgtct ggggcgcagc atgccccctg cccccggacc atggagatct ccctggtgcc 781 cctggagaat ggcagtgcca tgaccctcag aggaggaggg gaggcagggg caagctgtgt 841 gcagaccccc aggggagagt gtgggtgccc tccgacgtct ggactcaata atcagtccaa 901 agaaacactg ttgagggggc gcacaacgct cgaggatgcg aaccagggtg gacggccttt 961 gccccctatg gctcaggagc tgccacaacc tagaaggcta tctgctgagg atgaggaggg 1021 agaaggcgac cctggcctgg gcacagtgga ggaggaccag gctcctcagg atgcagggtc 1081 actccatcac cagcgagtcc tcataaacat ctccgggttg cgtttcgaga cgcagctggg 1141 caccctggca cagtttccca acaccctcct gggggaccca gccaagcgcc tgcactactt 1201 cgaccccttg agaaatgaat acttcttcga ccgcaaccgg cccagcttcg atggcatttt 1261 gtactactac cagtctgggg gccgcctgcg caggcccgtc aatgtctccc tggatgtgtt 1321 tgcagatgag atccgctttt accagctggg ggacgaggcc atggagcgct tccgggagga 1381 tgagggcttc atcaaggaag aggagaagcc cctgccccgc aacgagttcc agcgccaggt 1441 atggcttatc ttcgaatacc cagaaagctc tgggtccgca agagccatcg ccatagtgtc 1501 ggtcctggtc attctcatct ctatcatcac cttctgcctg gagactctgc ctgagttcag 1561 ggatgagcgg gagctgctac gccatccccc agtgccgccc cagcccccag cccctgcccc 1621 tgggatcaat ggcagcgtct ctggagcact ttcctctggc cctacggtgg ctccactctt 1681 gcctaggaca ctggccgatc cattcttcat cgtggagacc acatgtgtga tctggttcac 1741 ttttgagttg ctcgtgcgct tctttgcctg ccccagcaag gcagaattct ctcggaatat 1801 catgaacatc atcgatgtcg tggccatctt cccctacttt atcaccctgg gcaccgagct 1861 ggcagagcaa caaccagggg gagggggtca gaatgggcag caggccatgt ccctagccat 1921 cctcagggtg atccgcctgg tgcgggtgtt tcggatcttc aagctctccc gccactccaa 1981 gggactgcag atcctgggta agaccttgca agcatccatg cgggaactcg ggctactcat 2041 cttcttcctc ttcattggag tcatcctctt ctccagcgct gtctacttcg cagaggcaga 2101 caatcacggg tcccatttct ctagtatccc agatgccttc tggtgggcag tagtcactat 2161 gaccactgta ggctatggag acatgagacc catcactgta gggggcaaga tcgtgggttc 2221 actgtgcgcc atagctgggg tcctcaccat tgccctgcct gtccccgtca tcgtctccaa 2281 ctttaattac ttctatcatc gggagacaga ccacgaggag caggctgccc tgaaggaaga 2341 acaaggcaac cagaggcggg agtctgggct ggacacaggg ggtcaacgga aggtcagctg 2401 cagcaaggcc tccttttgca agactggggg ttccctggag agttctgaca gtatcagaag 2461 gggtagctgt cctctagaaa agtgtcacct caaggccaag agcaacgtgg acttgcggag 2521 gtccctgtat gccctctgtc tggacactag ccgtgaaaca gatttgtaaa gagagatcca 2581 ggcagactgg caccagtgaa gctggccaca ggggtgcccc ttgagcctgg gcatctgctt 2641 tacaccaccg agtatttaag cccacctggt cacccaccga tgtctgcctt tctttcaccc 2701 ttctcacctt cctgccctct aacttcccca ttttaactcc tctttccata acccccaggg 2761 tcgcctattt ttaacaagta tgacattcca tgacgcagga gccgttgaag tgctgagccc 2821 tcactggaag atggatgcat tcatagccag ttttctacac ccagcagagg gataatcaaa 2881 caaatttgac tttaaaaagc ttagatccca agagaatcca tagcattccc tacccgtgtt 2941 ccaaatttac tttacatggg attacatttg tgtatgggca aatattattt ttatggccga 3001 tgactgcatt ttgtacagca gtgcacatga agaatatttg ggtgtgctct taagatatac 3061 tttgaattat gaaagtgttg ggggggtcac catttcctgg gacactcagg gacaaagacc 3121 ctaaaagagt tgttcaggtt tctgtgttct caagcttctt attattctgg gatgtactat 3181 tggtgcttct ggtctaggag agagaatgtt ctagaagacc agcaaatcta atcttgtgac 3241 tgtcttcaca gaagcatttt aaggatgttg gaagaaggat ttggagaatt c // LOCUS RATKV2AA 2098 bp ds-DNA ROD 07-AUG-1990 DEFINITION Rat potassium channel-Kv2 gene, partial cds. ACCESSION M27159 M37146 KEYWORDS potassium channel-Kv1; transmembrane protein. SOURCE Rat brain DNA and cDNA to mRNA. ORGANISM Rattus rattus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 622 to 2098) AUTHORS Swanson,R., Marshall,J., Smith,J., Williams,J., Boyle,M.B., Folander,K., Luneau,C.J., Antanavage,J., Oliva,C., Buhrow,S.A., Bennett,C., Stein,R.B. and Kaczmarek,L.M. TITLE Cloning and expression of cDNA and genomic clones encoding three delayed rectifier potassium channels in rat brain JOURNAL Neuron 4, 929-939 (1990) STANDARD full staff_entry REFERENCE 2 (bases 1 to 2098) AUTHORS Luneau,C.J. JOURNAL Unpublished (1990) STANDARD full staff_entry COMMENT Computer readable copy of sequence [1],[2] kindly submitted by R.J.Swanson, 16-AUG-1989, for release after publication. FEATURES from to/span description pept 865 > 2098 potassium channel-Kv2 BASE COUNT 358 a 588 c 698 g 453 t 1 others ORIGIN 1 agtgtgcatc tctctctctc tctctccagc atccaggctt gctgcagccc ctagctgggt 61 aaggggtgtg atgtgagagt ggggtgggag ggggcacagg gcggggcctg ccacgtcact 121 tggagagtgt gttaaggagg aagggcagag ctgagagctg agcctgctgc tgctgttgct 181 gctgctgctg ttgctgctgc ttgctgttgc tgctgctgct ggggctgctg cgggtgcggg 241 caaggattga tgcggtgggg aggtgggtct ctcgctccgg ncccgggcag gcccagggcg 301 gttccgaggc ctgtagaaca gctcctggga agaaggtggc ggctgcaatc gcgaccttgg 361 ccagacctag ttcgtggtgg acgtagggcg gaggcggagg ccgagcccgg gcaggagtct 421 ttggcgagcc agagggaggc gcatctggcg cttcggtacc agcggcagcc ttgtgagtct 481 tgtgaggctg gagaagtgca gcaggacctg gtgagagcta gcaagtctgg agggcgcctg 541 tgggtcccga gcccagtttt aggcaccacc gagagctaag ccaagcgtct tttcgggcag 601 ccagtttcac cgcgcgacag tttgcgggtt ccaggcatct cagaaatctt gagcacggag 661 gcgcggctac tgagagccag agccacatcc cagacctagc ctggcagaga gaccagctgc 721 agggttcacc gacctaaccg ccaggtcaga gcacgggccc caccctaaag gagggcgcag 781 ccggagctgg gaagccggtg ccgcgctccg gagctcgtgt cgtgggcgcc gtcctagtgg 841 cggggagcgc accgccgagg tgacatgaga tcggagaaat ccctgacgct ggcggcgccg 901 ggggaggtcc gtgggccgga gggggagcaa caggatgcgg gtgagttcca ggaggccgag 961 ggcggcggcg gctgctgtag tagtgagagg ctggtgatca acatctctgg gctgcgctac 1021 gagacgcagc tgcgcacctt gtcgctgttc cctgacacgc tgctaggaga ccctggccgc 1081 agagtccgct tctttgaccc cttgaggaat gagtacttct ttgaccgcaa ccgacccagc 1141 ttcgacgcta tcctttatta ctaccagtcg gggggtcgcc tgcgcaggcc ggttaacgtg 1201 ccccttgaca tctttatgga agagattcgc ttctatcagt tgggagatga agccctggcg 1261 gccttccggg aggatgaggg ttgcctgccc gaaggtggtg aggatgagaa gccactcccc 1321 tcccagcctt tccagcgaca ggtctggctc ctctttgagt atccggagag ttctgggccc 1381 gcccgaggca ttgccatcgt ctcagtgttg gtcatcctca tctccattgt catcttttgc 1441 ctggagacct tgcctcagtt ccgtgcagat gggcgcggtg gaagcaacga ggggagtggg 1501 acccgcatgt ccccggcctc cagggggagc cacgaggagg aagatgaaga cgaggattcc 1561 tatgcatttc ctggtagcat tccctctggg gggttgggga ccggaggaac ttcttcattt 1621 agtactctcg ggggttcctt cttcacagac cccttcttcc tggtggaaac tctgtgtatc 1681 gtctggttca cctttgagct cctggtgcgc ttctctgcct gtcccagcaa ggcggccttc 1741 tttcgcaata tcatgaacat cattgacttg gtggccatct tcccctactt tatcaccctg 1801 ggcaccgagc tagtgcaacg tcacgagcag cagcctgtga gtggtggcag tggtcagaat 1861 gggcagcagg ccatgtccct agccatcctc agggtgatcc gcctggtccg ggtgtttcgg 1921 atcttcaagc tctcccgcca ctccaagggg ttgcagatcc tgggtaagac cttgcaagca 1981 tccatgcggg agctcgggct actcatcttc ttcctcttca ttggagtcat cctcttctcc 2041 agcgctgtct acttcgcaga ggcagatgac gttgactcgc tcttccctag catcccag // LOCUS RATKV3AA 2264 bp ds-DNA ROD 07-AUG-1990 DEFINITION Rat potassium channel-Kv3 gene, complete cds. ACCESSION M31744 KEYWORDS potassium channel-Kv3; transmembrane protein. SOURCE Rat brain DNA and cDNA to mRNA. ORGANISM Rattus rattus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (sites) AUTHORS Swanson,R., Marshall,J., Smith,J., Williams,J., Boyle,M.B., Folander,K., Luneau,C.J., Antanavage,J., Oliva,C., Buhrow,S.A., Bennett,C., Stein,R.B. and Kaczmarek,L.M. TITLE Cloning and expression of cDNA and genomic clones encoding three delayed rectifier potassium channels in rat brain JOURNAL Neuron 4, 929-939 (1990) STANDARD full staff_entry REFERENCE 2 (bases 1 to 2264; for [1]) AUTHORS Luneau,C.J. JOURNAL Unpublished (1990) STANDARD full staff_entry COMMENT Computer readable copy of sequence [1],[2] kindly submitted by R.J.Swanson, 16-AUG-1989, for release after publication. [2] Author Address Merch, Sharp, and Dohme Research Labs W42-300 West Point, PA 19486 FEATURES from to/span description pept 508 2085 potassium channel-Kv3 BASE COUNT 436 a 684 c 695 g 449 t ORIGIN 1 gggttcctcc aaggccagtc tggcagggta ggggttccgc ggggtctggg tagtggggtg 61 caagtcgaag gcgacccagt gacaaaagaa gggcgaggaa caggggtggc aagcggaaag 121 cggagccgcg cgcgcagtgg gcgggaaacc cgggggcggc ggcagagagg cgggcgcgcg 181 cctcgcgggg aggggtgtgg aggagggagg aggaggcgtc tggacggtgc agccgggcgg 241 gccgcgccag ccctgacaga gcctcgcggc agccgcagca acaggcggcg gggccgggct 301 cgtggggcag aggcggtggt ggggcgggga gctccaggag gagcgactcg gagctggcca 361 ccgccagcag ggaaggagag catcgccgcc tcccgcgctc ggccgccgca gccctccgcc 421 cgccaccgcg cccaccctgc gctggacccc gcgggcggcg gcgcgcgcat cctgcagagc 481 ccaggctacg ccgagctgcc gccagacatg accgtggtgc ccggggacca cctgctggag 541 ccagaagcgg cgggaggcgg cggcggggac ccgcctcagg gaggctgtgt cagtggcggc 601 ggctgcgacc gctacgaacc gctgccgccc gcgctgcccg ccgcgggcga gcaggattgc 661 tgcggggagc gcgtggtcat caacatctcc gggctgcgct tcgagacaca gctcaagacc 721 ctctgccagt tccctgagac gctgctaggc gaccccaagc ggcgcatgcg gtacttcgac 781 ccgctccgca atgagtactt ctttgaccgc aacagaccca gcttcgacgc catcctctac 841 tactaccagt ccgggggccg catccgccgg ccggtcaacg tgcccatcga catcttctcc 901 gaggagatcc gcttctacca actgggtgag gaggctatgg agaagttccg tgaggacgag 961 ggcttcctgc gggaggagga gcgacccctg ccccgccgtg acttccagcg ccaggtgtgg 1021 ctgctcttcg aataccccga gagctccggg ccggcccggg gcattgccat cgtgtcagtg 1081 ctggtcattc tcatctccat tgtcatcttc tgcttggaga cactacccga gtttcgcgac 1141 gagaaggact atcccgcctc tccgtcgcag gacgtgtttg aggctgccaa caacagcacg 1201 tcgggggcct cctctggagc ctccagcttc tcggacccct tcttcgtagt ggagaccctg 1261 tgcatcatct ggttctcctt tgagctgctg gtgcgattct ttgcttgccc cagtaaagcc 1321 accttctcca gaaatatcat gaacctgata gacattgtag ccatcatccc ttattttatt 1381 actctgggca ctgagctggc tgagcgacag ggtaatgggc agcaggctat gtcactggcc 1441 atcctgaggg tcatccgcct agtaagggtc ttccgcatct tcaagctctc ccgccattct 1501 aaggggctgc agatcctggg acagacactg aaggcttcca tgcgagagct ggggctgctc 1561 attttcttcc ttttcattgg ggtcatcctt ttctccagtg cagtctactt tgctgaggca 1621 gacgaccctt cttcgggttt taacagtatc ccggatgcct tctggtgggc cgtggtaacc 1681 atgacaactg tcggttatgg tgatatgcac ccagtgacca taggaggcaa gattgtgggc 1741 tctctttgtg ccatcgcagg tgtcttgacc attgcattgc cggttcctgt gattgtttcc 1801 aacttcaatt acttctacca ccgggagaca gaaggggaag agcaagccca gtacatgcac 1861 gtgggaagct gccagcacct ctcctcttca gcagaggagc tccgaaaagc ccggagtaac 1921 tccactctga gtaagtcgga gtatatggtg atcgaagagg ggggtatgaa ccacagcgcc 1981 ttcccccaga cccccttcaa aacgggcaac tccactgcca cttgcaccac caacaataat 2041 cccaactcct gtgtcaacat caaaaagata ttcactgatg tctaatagat gatacgattg 2101 ccattctgtg cccagtattg tgtggaacat gcccccttgg tctgtgtatg cccttgattt 2161 atacatttcc agaccattca tcaaggaaag tacatgaaga agtggaaaag cacacttcat 2221 tctccctctc cctattgctt catactgaaa caggtgcctg gttt // LOCUS RATKV3AB 2956 bp ss-mRNA ROD 07-AUG-1990 DEFINITION Rat mRNA for putative potassium channel subunit protein (RCK3). ACCESSION X16001 KEYWORDS membrane protein; potassium channel protein. SOURCE Rattus rattus. ORGANISM Rattus rattus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 2956) AUTHORS Pongs,O. TITLE ; JOURNAL Unpublished (1989) see COMMENT for author address STANDARD simple automatic REFERENCE 2 (bases 1 to 2956) AUTHORS Stuehmer,W., Ruppersberg,J.P., Schoerter,K.H., Sakmann,B., Stocker,M., Giese,K.P., Perschke,A., Baumann,A. and Pongs,O. TITLE Molecular Basis of Functional Diversity of Voltage Gated Potassium Channels in Mammalian Brain JOURNAL EMBO J. 8, 3235-3244 (1989) STANDARD simple automatic COMMENT *source: developmental stage=adult;tissue=brain-cortex; *source: clone=RCK3; [1] Author address Pongs O., Ruhr Universitaet Bochum, Fakultaet f Chemie , Lehrstuhl f Biochemie, Universitsstr 150, D-4630 Bochum, F R G. Submitted (31-JUL-1989) on tape to the EMBL Data Library FEATURES from to/span description pept 8 1585 put. RCK3 protein (AA 1-525) BASE COUNT 733 a 774 c 690 g 759 t ORIGIN 1 gccagacatg accgtggtgc ccggggacca cctgctggag ccagaagcgg cgggaggcgg 61 cggcggggac ccgcctcagg gaggctgtgt cagtggcggc ggctgcgacc gctacgaacc 121 gctgccgccc gcgctgcccg cggcgggcga gcaggattgc tgcggggagc gcgtggtcat 181 caacatctcc gggctgcgct tcgagacaca gctcaagacc ctctgccagt tccctgagac 241 gctgctaggc gaccccaagc ggcgcatgcg gtacttcgac ccgctccgca atgagtactt 301 cttcgaccgc aacagaccca gcctcgacgc catcctctac tactaccagt ccgggggccg 361 catccgccgg ccggtcaacg tgcccatcga catcttctcc gaggagatcc gcttctacca 421 actgggtgag gaggctatgg agaagttccg tgaggacgag ggcttcctgc gggaggagga 481 gcgacccctg ccccgccgtg acttccagcg ccaggtgtgg ctgctcttcg aataccccga 541 gagctccggg ccggcccggg gcattgccat cgtgtcagtg ctggtcattc tcatctccat 601 tgtcatcttc tgcttggaga cactacccga gtttcgcgac gagaaggact atcccgcctc 661 tccgtcgcag gacgtgtttg aggctgccaa caacagcacg tcgggggcct cctctggagc 721 ctccagcttc tcggacccct tcttcgtagt ggagaccctg tgcatcatct ggttctcctt 781 tgagctgctg gtgcgattct ttgcttgccc cagtaaagcc accttctcca gaaatatcat 841 gaacctgata gacattgtag ccatcatccc ttattttatt actctgggca ctgagctggc 901 tgagcgacag ggtaatgggc agcaggctat gtcactggcc atcctgaggg tcatccgcct 961 agtaagggtc ttccgcatct tcaagctctc ccgccattct aaggggctgc agatcctggg 1021 acagacactg aaggcttcca tgcgagagct ggggctgctc attttcttcc ttttcattgg 1081 ggtcatcctt ttctccagtg cagtctactt tgctgaggca gacgaccctt cttcgggttt 1141 taacagtatc ccggatgcct tctggtgggc cgtggtaacc atgacaactg tcggttatgg 1201 tgatatgcac ccagtgacca taggaggcaa gattgtgggc tctctttgtg ccatcgcagg 1261 tgtcttgacc attgcattgc cggttcctgt gattgtttcc aacttcaatt acttctacca 1321 ccgggagaca gaaggggaag agcaagccca gtacatgcac gtgggaagct gccagcacct 1381 ctcctcttca gcagaggagc tccgaaaagc ccggagtaac tccactctga gtaagtcgga 1441 gtatatggtg atcgaagagg ggggtatgaa ccacagcgcc ttcccccaga cccccttcaa 1501 aacgggcaac tccactgcca cttgcaccac caacaataat cccaactcct gtgtcaacat 1561 caaaaagata ttcactgatg tctaatagat gatacgattg ccattctgtg cccagtattg 1621 tgtggaacat gcccccttgg tctgtgtatg cccttgattt atacatttcc agaccattca 1681 tcaaggaaag tacatgaaga agtggaaaag cacacttcat tctccctctc cctattgctt 1741 catactgaaa caggtgcctg gttttgcaag tgggctgcat tctctcagct ctttttctct 1801 ctccctctct ctctccctgt ttcttaattt tgtgaacaac aaacttacat taagcttggt 1861 ttcttgtgca agccctaaag ctacatcctg agaggaaatg aaactataga gtcagagtaa 1921 ctgtgtgacc tcaaaaatca aaagatagtt gtttctttac taagtaaagg aggcagaact 1981 taaatgatgc tcctgttcgg tggacttttc agcattattt cctgactaag tgtaactact 2041 taacctctgg atgtgtgggt ggaaagtcta actagagtgt tgacgtgtaa accctctata 2101 attttttttt ttttggactg gcctttcagt ttgatctccc ctctaagaat ttcaggttca 2161 cataactttg aaccaaaagg gaaatgcccc aaatgtcctg atctgactat taactcttcg 2221 gagtttgcaa agcattttga aaacattaga cacagattcc aatgaagttg tgagttcatg 2281 cccaagtcaa tatctacgaa agtctagaaa ctcattttca gtgctgccag gagaaacaac 2341 agaaattcct gatgcatctg agagataagc ttctgcagta tcacaggaag attaaagtgg 2401 cagacacccc ttccagcgga agttactaat tcggacctga ctgatgcagt tcccatagca 2461 acccgtgttt cctgggaaac ccgaaaaagg ttgtcatggc atcttttgct ctctagcccc 2521 acccccaccc caggccgtgc gtttctacag taacctttcc agatggttcc tacttacacg 2581 acttcataag aaaaaacact atttgaataa agcgcacaaa ttaagtgaaa gactatatag 2641 aggtgaaatg aatcacaaaa tgctttttta cattttatat aaatcattga tgttatccca 2701 taacgactgg atcagaaagg aaactgtcgt ctttgaaatg ttacatgtaa ggcatgatct 2761 gaattaaatt atgtcagctg tttggtaaca atttttaaag atgcttctgt acagttcttt 2821 cactaagaaa tgacaagtca acagatgaaa cgaaaacagc aatataaaca tggtctgtac 2881 ataagcaagt gagagtcagt gtacccgaag tcttacacga taccttcaga tttcctcaat 2941 taaaaaaaaa aaaaag // LOCUS CEUMTFVLA 2682 bp ds-DNA ORG 07-AUG-1990 DEFINITION C.unicolor mitochondrial Phe-, Val-tRNA, 12S, and 16S rRNA genes, complete, and Leu-tRNA gene, 5' end. ACCESSION M35875 KEYWORDS 12S ribosomal RNA; 16S ribosomal RNA; transfer RNA-Leu; transfer RNA-Phe; transfer RNA-Val. SOURCE C.unicolor liver mitochondrion cell line DH-alpha-5 DNA, clone PCUNMR 9.0-18. ORGANISM Mitochondrion Cervus unicolor Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus unicolor. REFERENCE 1 (bases 1 to 2682) AUTHORS Miyamoto,M.M., Kraus,F. and Ryder,O.A. TITLE Phylogeny and evolution of antlered deer determined from mitochondrial DNA sequence JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.M.Miyamoto, 03-JUL-1990. FEATURES from to/span description tRNA 1 69 Phe-tRNA rRNA 70 1024 12S ribosomal RNA tRNA 1025 1091 Val-tRNA rRNA 1092 2663 16S ribosomal RNA tRNA 2664 > 2682 Leu-tRNA BASE COUNT 1010 a 555 c 467 g 650 t ORIGIN 1 gttgatgtag cttaaacaac aaagcaaggc actgaaaatg cctagatgag tatattaact 61 ccataaacat acaggtttgg tcccagcctt cctattaacc cttaatagac ttacacatgc 121 aagcatccgc accccagtga aaatgccccc taagttaata agactaagag gagctggtat 181 caagcacaca tccgtagctc acgacacctt gcacagccac acccccacgg gagacagcag 241 tgataaaaat taagccataa acgaaagttt gactaagcca tattaatcag ggttggtaaa 301 tttcgtgcca gccaccgcgg tcatacgatt aacccaagtt aataggcaca cggcgtaaag 361 cgtgttaaag cactatttca aataaagtta aactccaatt aagctgtaaa aagccataat 421 tgcaacaaaa ataaacaacg aaagtaactt tacaaccgct gaaacacgat agctaggacc 481 caaactggga ttagataccc cactatgcct agccttaaac acaaatagtt gtgtaaacaa 541 aactattcgc cagagtacta ccggcaatag cttaaaactc aaaggacttg gcggtgcttt 601 acacccttct agaggagcct gttctataat cgataaaccc cgataaacct caccattcct 661 tgctaataca gtctatatac cgccatcttc agcaaaccct aaaaaggtac aaaagtaagc 721 acaatcataa tacataaaaa cgttaggtca aggtgtaacc tatggaacgg aaagaaatgg 781 gctacatttt ctaatctaag aaaatccaac acgaaagtta ttatgaaatt aataaccaaa 841 ggaggattta gcagtaaact aagaatagag tgcttagttg aattaggcca tgaagcacgc 901 acacaccgcc cgtcaccctc ctcaagtagg cacaatacac tcaaatttat ttacacgtat 961 taatcatatg agaggagaca agtcgtaaca aggtaagcat actggaaagt gtgcttggat 1021 aaatcaagat atagcttaaa taaagcatct agtttacacc tagaagattt cacatatcac 1081 gaatatcttg aaccaattct agcccgcaag cccattcaca ctaaattatc aatgtaacat 1141 aaaataaaac atttattcaa caacaaaaag tataggagat agaaatttta atacggcgct 1201 atagagaaag taccgtaagg gaacgatgaa agaaaaaaat caaagtacaa aaaagcaaag 1261 attacccctt gtaccttttg cataatgagt taactagtaa aaacttaaca aaatgaattt 1321 cagctaagta ccccgaaacc agacgagcta cttatgaaca atttatcgag aaccaactca 1381 tctatgtagc aaaatagtga gaagatttgt aagtagaggt gaaacgccca acgagcctgg 1441 tgatagctgg ttgtccagaa aatgaatatt agttcagctt taaaaatacc aaaaatatga 1501 acaaattata atgtattttt aaaagttagt ctaaaaaggt acagcctttt agaaatggat 1561 acaaccttaa ctagagagta agttttaaca ttaaaccata gtaggcctaa aagcagccac 1621 caattaagaa agcgttaaag ctcaacaata aaatagtatt aatttcaata ataaatagtc 1681 aactcctaat ctaatactgg actaatctat taagaataga agcaataatg ttaatatgag 1741 taacaagaag taacttctcc ccgcataagt ttaagtcagt atctgataat actctgacta 1801 ttaacagcaa aataagaata acctaactat aaataactta ttaactatac tgttaatccg 1861 acacaggaat gcacttaagg aaagattaaa agaagtaaaa ggaactcggc aaacactaaa 1921 ccccgcctgt ttaccaaaaa catcacctcc agcataacta gtattggagg cactgcctgc 1981 ccagtgacaa ccgttaaacg gccgcggtat cctgaccgtg caaaggtagc ataatcactt 2041 gttctctaaa tagggacttg tatgaatggc cacacgaggg ttttactgtc tcttacttcc 2101 aatcagtgaa attgaccttc ccgtgaagag gcgggaatat actaataaga cgagaagacc 2161 ctatggagct ttaactactt agcccaaaga aacaaatttc attaccaagg aaacaacaac 2221 actctttatg ggctaacagc tttggttggg gtgacctcgg agaacaagaa aacctccgag 2281 cgattttaaa gactagacct acaagtcgaa tcacacaatc gtttattgat ccaaaaaatt 2341 gatcaacgga acaagttacc ctagggataa cagcgcaatc ctattcaaga gtccatatcg 2401 acaatagggt ttacgacctc gatgttggat caggacatcc cgatggtgca accgctatca 2461 aaggttcgtt tgttcaacga ttaaagtcct acgtgatctg agttcagacc ggagtaatcc 2521 aggtcggttt ctatctatta tgtatttctc ccagtacgaa aggaccagag aaataaggcc 2581 aacttcaaat aagcgcctta aattagttaa tgatatcatc ttaattaacc tcacaaacaa 2641 actttgccct agagaagggc tttgttaagg tggcagagcc gg // LOCUS CPDBA 76 bp ss-RNA INV 07-AUG-1990 DEFINITION C.colpoda 5.8S ribosomal RNA. ACCESSION M35558 KEYWORDS 5.8S ribosomal RNA. SOURCE C.colpoda ribosomal RNA. ORGANISM Colpidium colpoda Eukaryota; Animalia; Metazoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Glaucomidae. REFERENCE 1 (bases 1 to 76) AUTHORS Van Bell,C.T. TITLE 5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida) JOURNAL J. Mol. Evol. 22, 231-236 (1985) STANDARD simple staff_review FEATURES from to/span description rRNA < 1 > 76 5.8S ribosomal RNA BASE COUNT 21 a 14 c 20 g 21 t ORIGIN 1 atgcgaattg cagaacacgc gagtcatcag atctttgaac gcaattggtg ggggtgtaaa 61 aaccttcatg ttcgtt // LOCUS ECOLIVRA 729 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli high-affinity branched-chain amino acid transport repressor (livR) gene, complete cds. ACCESSION M36020 KEYWORDS high-affinity branched-chain amino acid transport repressor. SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 729) AUTHORS Antonucci,T.K., Wagner,L.M. and Oxender,D.L. TITLE Cloning, expression, and nucleotide sequence of livR, the repressor for high-affinity branched-chain amino acid transport in Escherichia coli JOURNAL Proteins 1, 125-133 (1986) STANDARD simple staff_review FEATURES from to/span description pept 229 729 high-affinity branched-chain amino acid transport repressor (livR) BASE COUNT 181 a 192 c 170 g 186 t ORIGIN 1 cggcatgtca tttcctctct ctgcaattgt gtacaaatgt acacaacctt gctaatgttg 61 tgttccctct cttatttgac tgatctatga ccgtaaattc ttcacgtaat gcattgaaac 121 gccgaacctg gcattgttta tgttcttctt tttgccaggc ctgttaatgg cgtcctgggc 181 aacccgtacg cctctatccg cgatattctc tctgtctcga tcgctgaaat gggcgtgttc 241 tctttggtct ggatctccat tgccggcgcg caggtacgtc cgcgatcatt gcgccgaaca 301 acagcgcgcg gttctttcgc aatacataag cacgaacaag aaacagataa ccacgcctgc 361 cataacacca tcaagccgaa ctcttcacat gcttggtgca cctgcgaatg taaccgaagg 421 tcggtggtta gcacgcataa agccagcata attccggcga ataacaaccc ggcagcgttc 481 cccatgccga aactgaatgt gctgaactgg aaggtgatca tcccgatcat cagcccaata 541 acaaagaagg cgcagaatgc cagcaggtca gtgacctgga ctgtgaatcg agataaagcc 601 gatgcgatcc agtgttttta cgcggcgggc atcgtggatc ttgtaaaagg tcactttgtt 661 aagcacgacg ttgtcatcta tcggcatctc aatctggcta gaatgacgcg gttaaggaag 721 caaccgtga // LOCUS GCHBA 76 bp ss-RNA INV 07-AUG-1990 DEFINITION G.chattoni 5.8S ribosomal RNA. ACCESSION M35559 KEYWORDS 5.8S ribosomal RNA. SOURCE G.chattoni ribosomal RNA. ORGANISM Glaucoma chattoni Eukaryota; Animalia; Metazoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Glaucomidae. REFERENCE 1 (bases 1 to 76) AUTHORS Van Bell,C.T. TITLE 5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida) JOURNAL J. Mol. Evol. 22, 231-236 (1985) STANDARD simple staff_review FEATURES from to/span description rRNA < 1 > 76 5.8S ribosomal RNA BASE COUNT 21 a 13 c 20 g 22 t ORIGIN 1 atgcgaattg cagaatccgc gagtcatcag atctttgaac gcaagtggtg gaggtgtaaa 61 aaccttcatg tttgtt // LOCUS HYRMTFVLA 2680 bp ds-DNA ORG 07-AUG-1990 DEFINITION H.inermis mitochondrial Phe-, Val-tRNA, 12S, and 16S rRNA genes, complete, and Leu-tRNA gene, 5' end. ACCESSION M35876 KEYWORDS 12S ribosomal RNA; 16S ribosomal RNA; transfer RNA-Leu; transfer RNA-Phe; transfer RNA-Val. SOURCE H.inermis liver and spleen mitochondrion cell line DH-alpha-5 DNA, clone PHINMR 4.0-6. ORGANISM Mitochondrion Hydropotes inermis Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Hydropotes inermis. REFERENCE 1 (bases 1 to 2680) AUTHORS Miyamoto,M.M., Kraus,F. and Ryder,O.A. TITLE Phylogeny and evolution of antlered deer determined from mitochondrial DNA sequence JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable [or printed] sequence for [1] kindly submitted by M.M.Miyamoto, 03-JUL-1990. FEATURES from to/span description tRNA 1 70 Phe-tRNA rRNA 71 1027 12S ribosomal RNA tRNA 1028 1094 Val-tRNA rRNA 1095 2661 16S ribosomal RNA tRNA 2662 > 2680 Leu-tRNA BASE COUNT 1010 a 526 c 468 g 676 t ORIGIN 1 gttaatgtag cttaaaaaat aaagcaaggc actgaaaatg cctagatgag tatatttaac 61 tccataaaca caaaggtttg gtcccagcct tcctattgac ctttaataga cttacacatg 121 caagcatccg catcccagtg aaaatgccct ccaagttaat aagactaaga ggagctggta 181 tcaagcacac acccgtagct catgacacct tgcttagcca cacccccacg ggagacagca 241 gtgataaaaa ttaagccatg aacgaaagtt tgactaagcc atattaatta gggttggtaa 301 atttcgtgcc agccaccgcg gtcatacgat taacccaagt taataggcat acggcgtaaa 361 gcgtgttaaa gcaacatata aaaatagagt taaactttaa ttaagctgta aaaagccata 421 attattaacg aaaataaata acgaaagtaa ctttacaatc gctgaaacat gatagctaag 481 acccaaactg ggattagata ccccactatg cttagcccta aacacaaata gttataataa 541 caaaactgtt cgccagagta ctaccggcaa tagcttaaaa ctcaaaggac ttggcggtgc 601 tttatatcct tctagaggag cctgttctat aatcgataaa ccccgatata cctcaccacc 661 ccttgctaat gcagtctata taccgccatc ttcagcaaac cctaaaaagg agcaaaagta 721 agcataatca taatacataa aaacgttagg tcaaggtgta acctatggag tgggaagaaa 781 tgggctacat tttctaattt aagaaaactt aatacgaaag ttattatgaa attaataacc 841 aaaggaggat ttagcagtaa actaagaata gagtgcttag ttgaactagg caatgaagca 901 cgcacacacc gcccgtcacc ctcctcaaat aagcacaata cgcttaaatt tattagtatg 961 tataaactgt atgagaggag acaagtcgta acaaggtaag catactggaa agtgtgcttg 1021 gataaatcaa gatatagctt aaataaagca cctagtttac acctagaaga tttcacacac 1081 cacgaatatc ttgaactaat tctagcccat aaatttattt acactaaact attattaata 1141 ttataaacaa agcatttatc tataattaaa gtataggaga tagaaatttt taatatgacg 1201 ctatagagaa agtaccgtaa gggaatgatg aaagaagaaa attaaagtac aaaaaagcag 1261 agattacccc tcgtaccttt tgcataatga gttaactagt aaaaacttaa caaaacgaat 1321 tttagctaag taccccgaaa ccagacgagc tacttataaa cagtttatca agaaccaact 1381 catctatgtg gcaaaatagt gagaagattt ataagtagag gtgaaacgcc taacgagcct 1441 ggtgatagct ggttgtccag aaaatgaata ttagttcagc tttaaaaata ccaaaaatat 1501 aaacaaatca cactgtattt ttaaaagtta gtctaaaaag gtacagcctt ttagaaatgg 1561 atacaacctt gactagagag taaaatttaa taacaccata gtaggcctaa aagcagccat 1621 caattaagaa agcgttaaag ctcaacaata agtttacatt aatttcaata attataaatc 1681 aactcctagc ttaatactgg actaatctat aaaaatagaa gcaataatgt taatatgagt 1741 aacaagaagt atattctccc tgcataagtt taagtcagta tctgataata tcctgactat 1801 taacagcaaa ataagaataa ctcaactata aatgacttat taattctact gttaatccaa 1861 cacaggaatg cacttaagga aagattaaaa gaagtaaaag gaactcggca aacactaaac 1921 cccgcctgtt taccaaaaac atcacctcca gcataactag tattggaggc actgcctgcc 1981 cagtgacaac cgttaaacgg ccgcggtatc ctgaccgtgc aaaggtagca taatcacttg 2041 ttctctaaat aaggactagt atgaatggcc aaacgagggt tttactgtct cttacttcca 2101 atcagtgaaa ttgaccttcc cgtgaagagg cgggaatata ataataagac gagaagaccc 2161 tatggagctt taactactta acccaaagaa acaaacttaa ccactaaggt gacaacaata 2221 ttctctatgg gttaacagct ttggttgggg tgacctcgga gaacaaaaaa tcctccgagc 2281 gattttaaag actagaccta caagtcgcat cgcacaatcg tttattgatc caaaaattga 2341 tcaacggaac aagttaccct agggataaca gcgcaatcct atttaagagt ccatatcgac 2401 aatagggttt acgacctcga tgttggatca ggacatcctg gtggtgcagc cgctatcaaa 2461 ggttcgtttg ttcaacgatt aaagtcctac gtgatctgag ttcagaccgg agtaatccag 2521 gtcggtttct atctattgtg tatttctccc agtacgaaag gaccagagaa ataaggccaa 2581 ctaaaaaaaa gcgccttaac ccaattaatg atctcatctc aattaaaatc acaaacaaac 2641 tccgccctag aaaagggctt tgttaaggtg gcagagccgg // LOCUS M36004 59 bp ds-DNA BAD 07-AUG-1990 DEFINITION Figure 1. Insert of plasmiod p WL144 and nucleic acid sequence of selA-selB overlap. ACCESSION M36004 REFERENCE 1 (bases 1 to 59) AUTHORS Forchhammer,K., Ruecknagel,K.-P. and Boeck,A. TITLE Purification and biochemical characterization of SELB, a translation factor involved in selenoprotein synthesis JOURNAL J. Biol. Chem. 365, 9346-9350 (1990) STANDARD simple staff_review COMMENT Secondary reference to EMBL entry X16644 for Nature 342, 453-456 (1989) FEATURES from to/span description BASE COUNT 14 a 9 c 18 g 18 t ORIGIN 1 gagcaacggt ttttggagat gttgttgaaa tgattattgc gactgccgga cacgttgac // LOCUS M36102 611 bp ds-DNA BAD 07-AUG-1990 DEFINITION Figure 2. Nucleotide sequence of AVP-NpII precursor mRNA from bovine hypothalamus. ACCESSION M36102 REFERENCE 1 (bases 1 to 611) AUTHORS Brownstein,M.J. TITLE biosynthesis of vasopressin and oxytocin JOURNAL Ann. Rev. Physiol. 45, 129-135 (1983) STANDARD unannotated staff_entry COMMENT Secondary reference to Nature 295, 299-303, accession number J00001. FEATURES from to/span description BASE COUNT 92 a 227 c 205 g 86 t 1 others ORIGIN 1 ngcacagtct acagagcagc actgcgcacg tgtgcccacg cgtgccagga tgcccgacgc 61 cacactgccc gcctgcttcc tcagcctgct ggccttcacc tctgcttgct acttccagaa 121 ctgcccaagg ggcggcaaga gggccatgtc cgacctggag ctgagacagt gtctcccctg 181 cggccccggg ggcaaaggcc gctgcttcgg gcccagcatc tgctgcgggg acgagctggg 241 ctgcttcgtg ggcacggccg aggcgctgcg ctgccaagag gagaactacc tgccgtcgcc 301 ctgccagtcc ggccagaagc cctgcgggag cgggggccgc tgcgccgccg ccggcatctg 361 ctgcaacgat gagagctgcg tgaccgagcc cgagtgccgg gaaggtgtcg gcttcccccg 421 ccgcgttcgc gccaacgacc ggagcaacgc gaccctgctg gacgggccga gcggggcctt 481 gttgctgcgg ctggtgcagc tggcgggggc gccggagccc gcggagcccg cccagcccgg 541 cgtctactga ggcgcgcccc ccccctcccc acccctgccc tcgcagcacg aaaaataaac 601 gttttaaagg c // LOCUS MMUMTFVLA 2682 bp ds-DNA ORG 07-AUG-1990 DEFINITION M.reevesi mitochondrial Phe-, Val-tRNA, 12S, and 16S rRNA genes, complete, and Leu-tRNA gene, 5' end. ACCESSION M35877 KEYWORDS 12S ribosomal RNA; 16S ribosomal RNA; transfer RNA-Leu-tRNA; transfer RNA-Phe; transfer RNA-Val. SOURCE M.reevesi liver and brain mitochondrion cell line JM109 DNA, clone PMREMR 4.8-16. ORGANISM Mitochondrion Muntiacus reevesi Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervulinae; Muntiacus reevesi. REFERENCE 1 (bases 1 to 2682) AUTHORS Miyamoto,M.M., Kraus,F. and Ryder,O.A. TITLE Phylogeny and evolution of antlered deer determined from mitochondrial DNA sequence JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.M.Miyamoto, 03-JUL-1990. FEATURES from to/span description tRNA 1 69 Phe-tRNA rRNA 70 1028 12S ribosomal RNA tRNA 1029 1196 Val-tRNA rRNA 1197 2664 16S ribosomal RNA tRNA 2659 > 2682 Leu-tRNA BASE COUNT 1001 a 543 c 463 g 675 t ORIGIN 1 gttaatgtag cttaagcaat aaagcaaggc actgaaaatg cctagatgag tgtactagct 61 ccataaacat ataggtttgg tcccagcctt cctattaacc cttaatagac ttacacatgc 121 aagcatccac atcccagtga aaatgccctc taagttaata agactaagag gagctggtat 181 caagcacaca tccgtagctc acgacgcctt gctcagccac acccccacgg gagacagcag 241 tgacaaaaat taagccataa acgaaagttt gactaagcca tattaattag ggttggtaaa 301 tttcgtgcca gccaccgcgg tcatacgatt aacccaagtt aataggtata cggcgtaaag 361 cgtgttaaag cactatttcc aaataaagct aaatttcaat taagctgtaa aaagccataa 421 ttgcaacaaa aataaataac gaaagtaact ttacagttgc tgaaacacga tagctaggac 481 ccaaactggg attagatacc ccactatgcc tagccctaaa cacaaatagt ttccacaaac 541 aaaactattc gccagagtac taccggcaat agcttaaaac tcaaaggact tggcggtgct 601 ttataccctt ctagaggagc ctgttctata atcgataaac cccgatagac ctcaccattc 661 ctcgctaata cagtctatat accgccatct tcagcaaacc ctaaaaagga ataaaagtaa 721 gcgcaatcat aatacgtaaa aacgttaggt caaggtgtaa cctatgggat gggaagaaat 781 gggctacatt ttctaactta agaataattc atatacgaaa gttattatga aattaataac 841 caaaggagga tttagcagta aactaagaat agagtgctta gttgaattag gccatgaagc 901 acgcacacac cgcccgtcac cctcctcaag taagtacgat atgctcaaac ttatttacat 961 atattaacca tatgagagga gataagtcgt aacaaggtaa gcatactgga aagtgtgctt 1021 ggataaatca agatatagct taaataaagt atctagttta cacctagaag atttcactat 1081 accacgaata tcttgaacca attctagccc ataagccgat tcacactaaa ttaccaattt 1141 attataaata aaacatttac ctaccattaa aagtatagga gatagaaatt ttaatatggc 1201 gctatagaga tagtaccgta agggaacgat gaaagaaaaa aatcaaagta caaagaagca 1261 aagattaccc cttgtacctt ttgcataatg agttaactag caaaaactta acaaaatgaa 1321 ttttagctaa gtaccccgaa accagacgag ctacttatga acaatttatc gagaaccaac 1381 tcatctatgt agcaaaatag tgagaagatt tgtaagtaga ggtgaaacgc ctaacgagcc 1441 tggtgatagc tggttgtcca gaaaatgaat attagttcag ctttaaaaat accaaaaata 1501 ttaacaaatt ataatgtatt tttaaaagtt agtctaaaaa ggtacagcct tttagaaacg 1561 gatacaacct taattagaga gtaaaactta atacaaatca tagtaggctt aaaagcagcc 1621 accaattaag aaagcgttaa agctcaacaa taaaacaacc ttaattccaa caacaagtaa 1681 tcaactccta acccaatact ggactaatct attaaaaata gaagcaataa tgttaatatg 1741 agtaacaaga agtatttctc cctgcatgag tttaagtcag tatctgataa tattctgact 1801 attaacagca agataagaat aacctaccca taaataattt attaattata ctgttaatcc 1861 aacacaggaa tgcacttaag gaaagattaa aagaagtaaa aggaactcgg caaacactaa 1921 accccgcctg tttaccaaaa acatcacctc tagcattact agtattagag gcactgcctg 1981 cccagtgaca accgttaaac ggccgcggta tcctgaccgt gcaaaggtag cataatcact 2041 tgttctctaa ataaggactt gtatgaatgg ccacacgagg gttttactgt ctcttacttc 2101 caatcagtga aattgacctt cccgtgaaga ggcgggaata tattaataag acgagaagac 2161 cctatggagc tttaactact tagcccaaag aaacaaaatt tatttctaag gaaacaacaa 2221 cattctctat gggctaacag ctttggttgg ggtgacctcg gagaacaaaa aatcctccga 2281 gcgattttaa agactagacc cacaagtcaa atcacataat cgctcattga tccaaataat 2341 tgatcaacgg aacaagttac cctagggata acagcgcaat cctattcaag agtccatatc 2401 gacaataggg tttacgacct cgatgttgga tcaggacatc ccgatggtgc aaccgctatc 2461 aaaggttcgt ttgttcaacg attaaagtcc tacgtgatct gagttcagac cggagtaatc 2521 caggtcggtt tctatctatt atgtatttct cccagtacga aaggaccaga gaaataaggc 2581 caacttcaaa caagcgcctt aaattaatta atgatattat cttaattaac tatacaaaca 2641 gaccctaccc tagaaaaggg ttttgttaag gtggcagagc cg // LOCUS ODOMTFVLA 2677 bp ds-DNA ORG 07-AUG-1990 DEFINITION O.virginianus mitochondrial Phe-, Val-tRNA, 12S and 16S rRNA, genes, complete, and Leu-tRNA gene, 5' end. ACCESSION M35874 KEYWORDS 12S ribosomal RNA; 16S ribosomal RNA; transfer RNA-Leu; transfer RNA-Phe; transfer RNA-Val. SOURCE O.virginianus brain mitochondrial cell line JM109 DNA, clone POVIMR 4.1-19. ORGANISM Mitochondrion Odocoileus virginianus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus virginianus. REFERENCE 1 (bases 1 to 2677) AUTHORS Miyamoto,M.M., Kraus,F. and Ryder,O.A. TITLE Phylogeny and evolution of antlered deer determined from mitochondrial DNA sequence JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.M.Miyamoto, 03-JUL-1990. FEATURES from to/span description tRNA 1 69 Phe-tRNA rRNA 70 1022 12S ribosomal RNA tRNA 1023 1091 Val-tRNA rRNA 1092 2658 16S ribosomal RNA tRNA 2659 > 2677 Leu-tRNA BASE COUNT 1000 a 550 c 467 g 660 t ORIGIN 1 gttaatgtag cttaaacaat aaagcaaggc actgaaaatg cctagatgag tataattact 61 ccataaacac agaggtttgg tcccagcctt cctattaatc cctagcagac ttacacatgc 121 aagtatcctc atcccagtga aaatgccctc caagtcaata aaactaagag gagctggtat 181 caagctcaca cccgtagctc atgacgcctt gctcagccac acccccacgg gagacagcag 241 tgataaaaat taagctataa acgaaagttt gactaagtca tgctaattag ggttggtaaa 301 tttcgtgcca gccaccgcgg tcatacgatt aacccaagtt aataggcaca cggcgtaaag 361 cgtgtttaag cactatgcca aatagagtta aactccaatt aagctgtaaa aagccataat 421 caagacgaaa ataaataacg aaagtaactt tacaaccgct gaaacacgat agctaagatc 481 caaactggga ttagataccc cactatgctt agccctaaac ataaatagtt atataaacaa 541 aactattcgc cagagtacta ccggcaatag cttaaaactc aaaggacttg gcggtgcttt 601 atacccttct agaggagcct gttctataat cgataaaccc cgatagacct taccacccct 661 tgctaataca gtctatatac cgccatcttc agcaaaccct aaaaaggaac aaaagtaagc 721 acaatcatta tacataaaaa cgttaggtca aggtgtaacc tatggagtgg aaagaaatgg 781 gctacatttt ctaatctaag aaaactcttt acgaaagtta ctatgaaatt agtaaccaaa 841 ggaggattta gcagtaaact aagaatagag tgcttagttg aattaggcca tgaagcacgc 901 acacaccgcc cgtcaccctc ttcaaatagg cacaatacac ttaaatttaa ttatacgtat 961 taatcatatg agaagagata agtcgtaaca aggtaagcat actggaaagt gtgcttggat 1021 aatcaagata tagcttaaac taaagcatct agtttacacc tagaagattt cacatattat 1081 gaatatcttg aactaaccct agcccacaaa tccatttata ctaaattatc aagatactac 1141 aaataaaaca tttatccact gttaaaagta taggagatag aaattttaga tatggcgcta 1201 tagagaaagt accgtaaggg aacgatgaaa gaaaaaatta aagtacaaaa aagcaaagat 1261 taccccttgt accttttgca taatgagtta actagtaaaa acttaacaaa atgaatttca 1321 gctaagtacc ccgaaaccag acgagctact tatgaacaat ttatcgagaa tcaactcatc 1381 tatgtggcaa aatagtgaga agattcataa gtagaggtga aacgcctaac gagcctggtg 1441 atagctggtt gtccaggaaa tgaatattag ttcagcttta aaaaatacca ataatataaa 1501 caaatatact gtatttttaa aagttagtct aaaagggaac agccttttag aaacggatac 1561 aaccttaact agagagtaaa acctgataat accatagtag gcccaaaagc agccaccaat 1621 taagaaagcg ttaaagctca acaataaaac tatcttaatc ccaataacaa ataatcaact 1681 cctagcctta atactggact aatctataaa aatagaagca ataatgttaa tatgagtaac 1741 aagaagtatc ttctccccgc acgagtttaa gtcagtacct gataatattc tgaccattaa 1801 cagcaaaata agaataacct aattataaat aacttactta ttatactgtt gatccaacac 1861 aggagtgcac ttaaggaaag attaaaagaa gtaaaaggaa ctcggcaaac accaaacccc 1921 gcctgtttac caaaaacatc acctccagca taactagtat tgggggcatt gcctgcccag 1981 tgacaaccgt taaacgccgc ggtatcctga ccgtgcaaag gtagcataat catttgttct 2041 ctaaataagg acttgtatga atggccaaac gagggtttta ctgtctctta cttccaatca 2101 gtgaaattga ccttcccgtg aagaggcggg aatactataa taagacgaga agaccctatg 2161 gagctttaac tacttagtcc aaagaaataa attcactaac caaggaaaca acaatattct 2221 tcatggacta acagctttgg ttggggtgac ctcggagaac agaaaatcct ccgagcgatt 2281 ttaaagacta gactcacaag tcaaatcaca caatcgctta ttgatccaaa aaattgatca 2341 acggaacaag ttaccctagg gataacagcg caatcctatt caagagtcca tatcgacaat 2401 agggtttacg acctcgatgt tggatcagga caccccgatg gtgcaaccgc tatcaaaggt 2461 tcgtttgttc aacgattaaa gtcctacgtg atctgagttc agaccggagt aatccaggtc 2521 ggtttctatc tattacgtat ttctctcagt acgaaaggac cagagaaata gggccaactt 2581 agaacaagcg ccttaaatta actaatgatt tactcttaat tagatacaca aacaaatctc 2641 gccctagaaa agggctttgt taaggtggca gagcccg // LOCUS SHPTGA 470 bp ss-mRNA MAM 07-AUG-1990 DEFINITION Ovine thyroglobulin mRNA, 3' end. ACCESSION M36148 KEYWORDS thyroglobulin. SOURCE Ovine, cDNA to mRNA. ORGANISM Ovis sp. Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Bovidae. REFERENCE 1 (bases 1 to 470) AUTHORS Durand,J., Malthiery,Y., Chabaud,O. and Lissitzky,S. TITLE L'extremite C-terminale de la thyroglobuline ovine presente de fortes homologies interspecifiques JOURNAL C R Soc Biol (Paris) 181, 258-266 (1987) STANDARD simple staff_review FEATURES from to/span description pept < 1 385 thyroglobulin (AA at 2) mRNA < 1 470 thyroglobulin mRNA BASE COUNT 122 a 140 c 112 g 96 t ORIGIN 1 ggggcagttt actctggagg agaaaagcct ttccctgaaa atcatgcagt atttttccaa 61 cttcatccga tccggaaatc ccaactaccc tcatgagttc tccaggagag cgcctgaatt 121 cgcagcccct tggcctgact tcgtcccccg tgatggcgca gagagctaca aggagctcag 181 tgtcctgctc cccaaccgac agggcctgaa aaaagccgac tgctccttct ggtccaagta 241 catccagtct ctgaaggcct cagcagatga aactaaggac gggctgttag cagagagcga 301 agaggaggac cagctggctg gctctgggct gacagaggac ctcctgggtc tcccagagtt 361 agcctccaag acctacagca agtgaccagc cccatcccaa atgccacctt ggacacctta 421 ttctccaaca tagccgctat caataaagtg tctacatgtc agaaaaagtc // LOCUS TELBA 75 bp ss-RNA INV 07-AUG-1990 DEFINITION T.leucophrys 5.8S ribosomal RNA. ACCESSION M35555 KEYWORDS 5.8S ribosomal RNA. SOURCE T.leucophrys ribosomal RNA. ORGANISM Tetrahymena leucophrys Eukaryota; Animalia; Metazoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae. REFERENCE 1 (bases 1 to 75) AUTHORS Van Bell,C.T. TITLE 5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida) JOURNAL J. Mol. Evol. 22, 231-236 (1985) STANDARD simple staff_review FEATURES from to/span description rRNA < 1 > 75 5.8S ribosomal RNA BASE COUNT 22 a 13 c 20 g 20 t ORIGIN 1 atgcgaattg cagaaccgcg agtcatcaga tctttgaacg caagtggtgg aggtgtaaaa 61 accttcatgt ttgta // LOCUS TEPBA 74 bp ss-RNA INV 07-AUG-1990 DEFINITION T.paravorax 5.8S ribosomal RNA. ACCESSION M35556 KEYWORDS 5.8S ribosomal RNA. SOURCE T.paravorax ribosomal RNA. ORGANISM Tetrahymena paravorax Eukaryota; Animalia; Metazoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae. REFERENCE 1 (bases 1 to 74) AUTHORS Van Bell,C.T. TITLE 5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida) JOURNAL J. Mol. Evol. 22, 231-236 (1985) STANDARD simple staff_review FEATURES from to/span description rRNA < 1 > 74 5.8S ribosomal RNA BASE COUNT 21 a 14 c 18 g 21 t ORIGIN 1 atgcgaattg cagaatccgc gagtcatcag atctttgaac gcaagtggtg aaggctaaaa 61 ccttcatgtt tgtt // LOCUS TEUBA 75 bp ss-RNA INV 07-AUG-1990 DEFINITION T.patula 5.8S ribosomal RNA. ACCESSION M35553 KEYWORDS 5.8S ribosomal RNA. SOURCE T.patula ribosomal RNA. ORGANISM Tetrahymena patula Eukaryota; Animalia; Metazoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae. REFERENCE 1 (bases 1 to 75) AUTHORS Van Bell,C.T. TITLE 5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida) JOURNAL J. Mol. Evol. 22, 231-236 (1985) STANDARD simple staff_review FEATURES from to/span description rRNA < 1 > 75 5.8S ribosomal RNA BASE COUNT 22 a 13 c 19 g 21 t ORIGIN 1 atgcgaattg caaaaccgcg agtcatcaga tctttgaacg caagtggtgg aggtgtaaaa 61 accttcatgt ttgtt // LOCUS TEXBA 75 bp ss-RNA INV 07-AUG-1990 DEFINITION T.vorax 5.8S ribosomal RNA. ACCESSION M35554 KEYWORDS 5.8S ribosomal RNA. SOURCE T.vorax ribosomal RNA. ORGANISM Tetrahymena vorax Eukaryota; Animalia; Metazoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae. REFERENCE 1 (bases 1 to 75) AUTHORS Van Bell,C.T. TITLE 5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida) JOURNAL J. Mol. Evol. 22, 231-236 (1985) STANDARD simple staff_review FEATURES from to/span description rRNA < 1 > 75 5.8S ribosomal RNA BASE COUNT 22 a 13 c 20 g 20 t ORIGIN 1 atgcgaattg cagaaccgcg agtcatcaga tctttgaacg caagtggtgg aggtgtaaaa 61 accttcatgt ttgta // LOCUS TEYBA 75 bp ss-RNA INV 07-AUG-1990 DEFINITION T.pyriformis 5.8S ribosomal RNA. ACCESSION M35552 KEYWORDS 5.8S ribosomal RNA. SOURCE T.pyriformis ribosomal RNA. ORGANISM Tetrahymena pyriformis Eukaryota; Animalia; Metazoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae. REFERENCE 1 (bases 1 to 75) AUTHORS Van Bell,C.T. TITLE 5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida) JOURNAL J. Mol. Evol. 22, 231-236 (1985) STANDARD simple staff_review FEATURES from to/span description rRNA < 1 > 75 5.8S ribosomal RNA BASE COUNT 22 a 13 c 20 g 20 t ORIGIN 1 atgcgaattg cagaaccgcg agtcatcaga tctttgaacg caagtggtgg aggtgtaaaa 61 accttcatgt ttgta // LOCUS WHTRDNA 140 bp ds-DNA PLN 07-AUG-1990 DEFINITION Wheat ribosomal RNA spacer DNA. ACCESSION M36062 KEYWORDS . SOURCE Wheat seedling DNA, clone pTA250. ORGANISM Triticum sp. Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae. REFERENCE 1 (bases 1 to 140) AUTHORS Appels,R. and Dvorak,J. TITLE The wheat ribosomal DNA spacer region: Its structure and variation in populations and among species JOURNAL Theor. Appl. Genet. 63, 337-348 (1982) STANDARD simple staff_review BASE COUNT 15 a 49 c 42 g 34 t ORIGIN 1 ggatccgcgt caacttccgt ccacgacggc cgccgggcct tttttcccgt gcccacgtac 61 agcccgttca cgggtccgtg taagggtccg tgtacgcggc gtctgccacg tacgtggttt 121 tgcccggttt tccatggcgc // LOCUS HUMINT01 42 bp ss-mRNA PRI 07-AUG-1990 DEFINITION Human leukocyte adhesion glycoprotein p150,95 mRNA, exon 1. ACCESSION M29165 Y00093 KEYWORDS integrin; leukocyte adhesion glycoprotein; protein p150,95. SEGMENT 1 of 7 SOURCE Human cell line HL-60, cDNA to mRNA, clone lambda-X47. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 42) AUTHORS Corbi,A.L., Miller,L.J., O'Connor,K., Larson,R.S. and Springer,T.A. TITLE cDNA cloning and complete primary structure of the alpha subunit of a leukocyte adhesion glycoprotein JOURNAL EMBO J. 6, 4023-4028 (1987) STANDARD simple automatic FEATURES from to/span description mRNA < 1 > 42 P150,95 mRNA, exon 1 BASE COUNT 9 a 15 c 10 g 8 t ORIGIN 1 bp upstream of EcoRI site; chromosome 16p11-13.1. 1 gaattcctgc cactcttcct gcaacggccc aggagctcag ag // LOCUS HUMINT02 3690 bp ds-DNA PRI 07-AUG-1990 DEFINITION Human leukocyte adhesion protein p150,95 alpha subunit gene, exons 2 - 6. ACCESSION M29482 Y00093 KEYWORDS integrin; leukocyte adhesion glycoprotein; protein p150,95. SEGMENT 2 of 7 SOURCE Human DNA, (library pWE15), clone 30.1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 3690, exons only) AUTHORS Corbi,A.L., Miller,L.J., O'Connor,K., Larson,R.S. and Springer,T.A. TITLE CDNA cloning and complete primary structure of the alpha subunit of a leukocyte adhesion glycoprotein JOURNAL EMBO J. 6, 4023-4028 (1987) STANDARD full staff_entry REFERENCE 2 (bases 1 to 3690) AUTHORS Corbi,A.L., Garcia-Aguilar,J. and Springer,T.A. TITLE Genomic structure of an integrin alpha subunit, the leukocyte p150,95 molecule JOURNAL Unpublished (1989) Center for Blood Res., Boston MA 02115 STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.Garcia-Aguilar, 19-OCT-1989. FEATURES from to/span description pept 1028 1064 integrin alpha subunit precursor, exon 2 (first expressed exon) 1666 1771 integrin alpha subunit precursor, exon 3 2391 2494 integrin alpha subunit precursor, exon 4 2795 2865 integrin alpha subunit precursor, exon 5 3020 + 3131 integrin alpha subunit precursor, exon 6 sigp 1028 1064 integrin alpha subunit signal peptide 1666 1685 integrin alpha subunit signal peptide matp 1686 1771 integrin alpha subunit 2391 2494 integrin alpha subunit 2795 2865 integrin alpha subunit 3020 + 3131 integrin alpha subunit pre-msg < 1 > 3690 P150,95 mRNA and introns IVS < 1 975 P150,95 intron A IVS 1065 1665 P150,95 intron B IVS 1772 2390 P150,95 intron C IVS 2495 2794 P150,95 intron D IVS 2866 3019 P150,95 intron E IVS 3132 > 3690 P150,95 intron F BASE COUNT 764 a 1050 c 1020 g 856 t ORIGIN 1 bp upstream of BamHI site; chromosome 16p11-13.1. 1 ggatcccttg ggcccaggag ttcgaagcag cagtgaacta tgcacccact gcactccagc 61 ctgggtggca gagcaagacc ctgtttctga aattaaaaaa aaaaattgat gtacattagg 121 gggcttccac ggcctgagct gcttcccctt gctttcctcc cagtggccct gaccttgtct 181 cttacaactt cccaccctga ctgtctggtt acccattgct gatttcacac acagaccctc 241 ctgtaccctg cctcatccat gtctggctgc tctgtcatct cccaactttg gttgctttca 301 atgctcagct caagcaccac ctctttcagg aagccttctc agaaagccac accttcacaa 361 cccgggtgag gcaccctgtg gtctctgtgc ttccccctca cagcaatgaa cttgctgttt 421 atacatctgc ctctccactg accccagggc tggtgctttg tggtttatat tttcttcccc 481 acctagcaga gggcttgcat ctccaggctc aaattaggct tcttgaataa atgatgaata 541 aatgagtgaa tgaatgaatg aacaaatact cgctctgtgc tcctcctagg gacccggatc 601 ccccactcct tggcccagac tttccaggtc agagtggagg cctcccacca gggtttcctt 661 taggggtcct gaggggtggg catctgccca aaccccctcc agtctggctg aaatttcaag 721 gtcaaggggt ccttctggca gtcaagggtg agcctgggag gggcagggca gggatttgca 781 tccatctaag caaagggcat caagccaagt catctgatga gagtgactcc ggttgggggg 841 tgggggcgtg tgggagccga gcctgtcctc ggatcagttg cgtactctgc ccgccccctc 901 tgactcatgc tgacaatctt cttccttccc ctggccacct ctctgcccac ttgcttcctc 961 agtaccttgg tccagctctt cctgcaacgg cccaggagct cagagctcca catctgacct 1021 tctagtcatg accaggacca gggcagcact cctcctgttc acaggtgagc ctggacccca 1081 atgaagtagg gctggggacc caggcccaag ggagccaggg ccctgaactg ggggctcagg 1141 ctggggggtt aggatctggg taggaagaga gactcagtca agcctgaggg ggaggcaggc 1201 acatagggtt tgagatttgg agtttgtgga gggagaggat attgatgaac caattttggg 1261 agagttccag agatgctgga agagaggcca gttgtctctg tactgcagag atttttaaaa 1321 taggcagaat gcgccaactt gtgctctgtg gacaggatgc tttggtccgc aagttttcct 1381 ggacgcactc tcatagcgcc cgaggtgcac gttggggaaa gatccttttt agagcctggg 1441 tactgctctg cagaaatgga gaactgcaac tcgatagtgg atggtgggca aggggcatcc 1501 ctggaccctg ggaaggagag aaggggatga gttgggtgtc cagaagaccc aggcaccccg 1561 ggcatcaggc tcggagggga gattgggacg ctggggccgg gggtggaggg cagccaggca 1621 gaaggaagac ccttctccaa agctctcttc ccacctcttt cccagcctta gcaacttctc 1681 taggtttcaa cttggacaca gaggagctga cagccttccg tgtggacagc gctgggtttg 1741 gagacagcgt ggtccagtat gccaactcct ggtgaggccc aggtggtgct cctttggctc 1801 catccatcct ctccctgctc aggccccatc cccccggccc tgccctgtta tttgcaaact 1861 ctcctctctg tctggtgtag cgactgccct ggctaatgaa gatttgcctt gaaggcaggc 1921 acggtctcac agctaacatt tacagagcag taagtgcagt gccaggctca tcacaggtgg 1981 atgctgattt agtccacacg acagcctgtg agtaggaatc agtcgtgcaa caaacactta 2041 tttgtttttt ctttcttttt ttctatacat ttaaaaatat atagagacag ggtctcacta 2101 tgttgcctgg gttggtctca aactcctggg ctcaagcaat cctcccgcct cagcctccca 2161 aagtgctggg attccaggtg tgagccacca cacccagact caacaaatat ttcttgtctc 2221 catacgccag agaatccaac agacagaaat cccttccaca tggactttaa attattaaaa 2281 tccatcttgc agatgaggaa gctgaggctc agggagggaa cgcaaacttg ccggagtggc 2341 agctgtcggc gtccacactc ttacctaaag tgttctttgt ctcctcgcag ggtggtggtt 2401 ggagcccccc aaaagataac agctgccaac caaacgggtg gcctctacca gtgtggctac 2461 agcactggtg cctgtgagcc catcggcctg cagggtgagt caccgcccct cccgggaccc 2521 agggccgggc tcccaggctt ccctgctcca ggggcccgtg gactcccgga gtgtcacttt 2581 cagcttccct gtgtctgaga ccctcaccct cagatatgct tcctggcccc ttaaggcctc 2641 cccgcccatc gcactcccgc agctctgtca agacccgaca gcttccttca ccgtcagacc 2701 tccttgtctc ccaggtggag gtgacccctg cccagctctt ccacagcctt ctctgtaggg 2761 cccgagagtg accatgcaca tatctgtccc acagtgcccc cggaggccgt gaacatgtcc 2821 ctgggcctgt ccctggcgtc taccaccagc ccttcccagc tgctggtgag tggccctggg 2881 tcacaggagg cttctgaggg agggagggag gagccggggc cgccgggggc tgggactctc 2941 ctgtagggtg gaggttccgg catctgaggg tgggaggtac atgccaggga gtgcccccag 3001 cagcccgctg tgtccccagg cctgcggccc caccgtgcac cacgagtgcg ggaggaacat 3061 gtacctcacc ggactctgct tcctcctggg ccccacccag ctcacccaga ggctcccggt 3121 gtccaggcag ggtgagtgtc gggaccacca aggctttgag gagctcacgc acatccaatt 3181 gggggtgcgg tgggctagag acagtcttgc cagagtggat cagaaagaag ggatctggaa 3241 aaagagttac ctcgtgttgc agtggttcct gacgctgctg cccgcacatc ctgccgatcg 3301 ccgcacgctg ccggaccttt cctgtgacct taacctctcc aagcctcagt ttcttcatct 3361 gttggatggg gataataaca cacccagcac tgaaagcaac acaggatgat tcatggccag 3421 gggttagcac agcagctagc accaggcgac acccatgccg gccagctgtt gttattttta 3481 gaggagagga ctattttcat ccaatgggtc ctgggatatg accaattggt ttgtgccgta 3541 gtttaggaaa ggtcagtgaa agtgcagtgt gagcaacgtg tgtgtgtaca tgtgtgtata 3601 tgtatgcatg tgtatacatg tgcacatgca catgtacatg catgtgtgtg catgtatgtg 3661 tgtgtgtgca tgtgcatgca ggttgagacg // LOCUS HUMINT03 4863 bp ds-DNA PRI 07-AUG-1990 DEFINITION Human leukocyte adhesion protein p150,95 alpha subunit gene, exons 7 - 15. ACCESSION M29483 Y00093 KEYWORDS integrin; protein p150,95. SEGMENT 3 of 7 SOURCE Human DNA, (library pWE15), clone 30.1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 294 to 3967; exons only) AUTHORS Corbi,A.L., Miller,L.J., O'Connor,K., Larson,R.S. and Springer,T.A. TITLE CDNA cloning and complete primary structure of the alpha subunit of a leukocyte adhesion glycoprotein JOURNAL EMBO J. 6, 4023-4028 (1987) STANDARD full staff_entry REFERENCE 2 (bases 1 to 4863) AUTHORS Corbi,A.L., Garcia-Aguilar,J. and Springer,T.A. TITLE Genomic structure of an integrin alpha subunit, the leukocyte p150,95 molecule JOURNAL Unpublished (1989) Center for Blood Res., Boston MA 02115 STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.Garcia-Aguilar, 19-OCT-1989. FEATURES from to/span description pept + 294 424 integrin alpha subunit precursor, exon 7 511 656 integrin alpha subunit precursor, exon 8 901 1054 integrin alpha subunit precursor, exon 9 1659 1809 integrin alpha subunit precursor, exon 10 2428 2501 integrin alpha subunit precursor, exon 11 2665 2794 integrin alpha subunit precursor, exon 12 3207 3349 integrin alpha subunit precursor, exon 13 3531 3671 integrin alpha subunit precursor, exon 14 3760 + 3969 integrin alpha subunit precursor, exon 15 matp + 294 424 integrin alpha subunit 511 656 integrin alpha subunit 901 1054 integrin alpha subunit 1659 1809 integrin alpha subunit 2428 2501 integrin alpha subunit 2665 2794 integrin alpha subunit 3207 3349 integrin alpha subunit 3531 3671 integrin alpha subunit 3760 + 3969 integrin alpha subunit pre-msg < 1 > 4861 P150,95 mRNA and introns IVS < 1 293 P150,95 intron F IVS 425 510 P150,95 intron G IVS 657 900 P150,95 intron H IVS 1055 1658 P150,95 intron I IVS 1810 2427 P150,95 intron J IVS 2502 2664 P150,95 intron K IVS 2795 3206 P150,95 intron L IVS 3350 3530 P150,95 intron M IVS 3672 3759 P150,95 intron N IVS 3970 > 4863 P150,95 intron O BASE COUNT 947 a 1358 c 1460 g 1097 t 1 others ORIGIN Chromosome 16p11-13.1. 1 acctgtgatc gccccctcgc ctcccaaagt actgggatta cacggtgagc caccacgcct 61 ggctcaatca cagcctcttt aggcaacttt aagagaatga agggccttgt tccaggcaag 121 gggttaggga acgtctgccc ctgatgagga gaggacccag ggtgtggagc ctgactccca 181 tcgccagact aggggcttag ggaggaaggg ttttggagag tgagctcttg caggagccac 241 ggtcctggac tccaggagtg tcacttggag gacggtgcca cctccttccc cagagtgccc 301 aagacaggag caggacattg tgttcctgat cgatggctca ggcagcatct cctcccgcaa 361 ctttgccacg atgatgaact tcgtgagagc tgtgataagc cagttccaga gacccagcac 421 ccaggtgtgc tttgggggag ggaggctgct gggggtgggt gcttggatcc tggtgatagg 481 cctcagccca gccctgtgtg cttctcccag ttttccctga tgcagttctc caacaaattc 541 caaacacact tgactttcga ggaattcagg cgcacgtcaa accccctcag cctgttggct 601 tctgttcacc agctgcaagg gtttacatac acggccaccg ccatccaaaa tgtcgtgtga 661 gtcctgattt cttccaggca cagtcccaaa gcacccaggt cttcccttgg cctcatctga 721 tctccacgag aaggggacag gcagggacca aaatccagcc cgtgataccc ttgccaagct 781 ggggcctctg ggtgggactg gggcctccca aaggaaaagg catcttctaa ttttcacaag 841 ggcaccaggg gctagtgtgg tttggttcac aggcctctaa gacctctcct ttcctgatag 901 gcaccgattg ttccatgcct catatggggc ccgtagggat gccaccaaaa ttctcattgt 961 catcactgat gggaagaaag aaggcgacac gctggattat aaggatgtca tccccatggc 1021 tgatgcagca ggcatcatcc gctatgcaat tggggtaggc ctgggatggc ttcccacttc 1081 tcccacggct tcctctcagg gcaactcccc tttctgtgta tgatgttctt ttctctttga 1141 gacagggtct tgctctatca cccaggaagt ggtgcaatcc tagctcactg cagccttgaa 1201 ctcctgggct ccagtgatcc tcccaccccg cctcccagta gtcgggacca caggtgtgtg 1261 ccatcaagcc tggctatttt ctttttggtt gagatggggt cttgctatgt tgcccaggct 1321 ggtctcaaat tcctggcctt aagcaattct gccaccttgg tctcccaaag gcacagggga 1381 ttacaggcgt gaaccaccgc caacaacatc cctttcaagg atagaaacac cagctctctc 1441 ggctcttact gccttaagga tgaaaactct gccccagact ggagaccatg atgatccttt 1501 ctcctaaact ccctgatgct gtccgggctt cgtgtttctc ctgtgtccac cgggtgtgat 1561 catgttgatc ttgtggggtt attggaagat gttgcaccca gtgcacacag gcacatttga 1621 tttattattt ttactgagtt gatcttttct ggggacaggt tggattagct tttcaaaaca 1681 gaaattcttg gaaagaatta aatgacattg catcgaagcc ctcccaggaa cacatattta 1741 aagtggagga ctttgatgct ctgaaagata ttcaaaccca actgagggag aagatctttc 1801 ccattgaggg tgagtctgaa gggagctctt cgcttgggga atcctcagcc gttaacacct 1861 ttccacttag aacccgaggc tccgtgaaac aggtagacag cgtctcggtt ctcctgcttt 1921 cccgggaccc cgatagccat gtctgtcagc ttgtccccac tgacgtcccc cagcactgtc 1981 agagctgccc caaagtggcc ccagggatgg ccctgctccc cacagagagt gatctcacac 2041 caccaccggc tccactgcag aacaaaagca gtccaggccc aacccaggag acccttccac 2101 ccacaccggg ccctacccag cccacatccc accagccact cactcccctg ggcaaggggc 2161 acacggacac ctggccccct cggtctgctt gtagacctgt ggggggccct gatgaggacc 2221 agatcggtgc tgccatcgct gtccacatcc atggagcaga ggggggcccc gaagtcggag 2281 ctgatctgga ggcagagcct ggtccctgtc acaggcacca gctctccctg tagcctccag 2341 tcttagcttc tcctaaagct gaagtgttct tggacctggc aaagcccgtc tccctccctg 2401 gcactcaagc gtcatgcctt accccaggta cggagaccac aagcagtagc tccttcgaat 2461 tggagatggc acaggagggc ttcagcgctg tgttcacacc tgtgcgtggg gccccttagg 2521 ccgatgatgt gccgtgaggg gagggggggc agggaaggcc agggtgggtg tcaggtgggt 2581 aagaggcgca aggcggaagg catatctctg gtcatgctgt cttcctgctc tcggctctgc 2641 tcagccctgg aatcctttct ccaggatggc cccgttctgg gggctgtggg gagcttcacc 2701 tggtctggag gtgccttcct gtacccccca aatatgagcc ctaccttcat caacatgtct 2761 caggagaatg tggacatgag ggactcttac ctgggtgaga aacagccagg ggttggggac 2821 aggtgggaga tgcactgccc agggtggggt ccagggttct ggggaagggg taggggnatg 2881 ggggctgtgc tgcccagtgt ggggcccagc ttctggggag ggaggatggg cactgtgctg 2941 cccggggtgg gttccagggt tctggggagg gggaatgggg gctgtgctgc ctggggtggg 3001 aatccagggt tctggggaga ggggatgggc gctgtgctgc ctggggtggg ttccagggtt 3061 ctggggagag aggatggggg ctgcattgcc cagggtgggg tccagggttc tggggagggg 3121 agatggtgct gtgctgcccg gggtgggaat ccagggttct ggggaggggg aatgggggcc 3181 tttgtgctga ggcctgggcc cctcaggtta ctccaccgag ctggccctct ggaaaggggt 3241 gcagagcctg gtcctggggg ccccccgcta ccagcacacc gggaaggctg tcatcttcac 3301 ccaggtgtcc aggcaatgga ggatgaaggc cgaagtcacg gggactcagg ttgggcgtga 3361 caggagccac aggccgggaa ttcagggtag gggaggtggc tgggcagaga agaggatgga 3421 ggggctttga gggccttggg ggaggtcctg gtacctgggg agaggtggga cctggcccac 3481 agggctgcct ctggcaggga caggcagcat gacccagctc tgcccttcag atcggctcct 3541 acttcgggcc ctccctctgc tccgtggacg tagacagcga cggcagcacc gacctggtcc 3601 tcatcgggcc cccccattac tacgagcaga cccgaggggc ccaggtgtct gtgtgtccct 3661 tgcccagggg ggtgagtggc tgatgggcct ggtgtgtgtg gggtctggtg tgggtgaggg 3721 gttgcccggg ttgggcctgg cactgttttt tttctgcagt ggagaaggtg gtggtgtgat 3781 gctgttctct acggggagca gggccacccc tggggtcgct ttggggcggc tctgacagtg 3841 ctgggggatg tgaatgggga caagctgaca gacgtggtca tcggggcccc aggagaggag 3901 gagaaccggg gtgctgtcta cctgtttcac ggagtcttgg gacccagcat cagcccctcc 3961 cacagccagg tgaggccgtg tcccatttct gtcactagag cagcctgctt cttgcctctc 4021 ccactctgtc atactggaaa actgtccctt tttacctttt cctacctccc ttgcccagct 4081 ctgagcacct tgtagcagtg gcgtggtctc agctcactgc aacctccgcc tcccaggttc 4141 aagcgattct ctctgcctca gcctccagag tagctgggat tacaggcatg caccaccatg 4201 tccggttatt ttttgtattt tagtagagac acgtttcgcc atgttggcta ggctggtctt 4261 gaactcctga cctcaggtga tctgcctgtc tcggcctccc aaagtgctgg gattataggc 4321 gtgagccgcc atgcccaggc ccctgccagt tttacaaggt acacaggtca ggcacagaaa 4381 acccatttta cagatggaat ctgggacact aggaagacaa gggccttggt ttgttggagg 4441 ttcagagtgg gtccgagatg gtgaaggaac tccggcctcc tgacctctaa cccggtgtgc 4501 agtctcccgg ctccctgctg ctcaccactt aggtccagtc atttcaacct ccctccacct 4561 gcccctctcc tccctggatg ctacatgatt ttattccctt cctgccatca aggtcccacc 4621 aaatgcccat ccctgcagcc tccctccacc ccaagggtag cagggttccc tgagaacgaa 4681 gggctgcctt tcttggcaaa agtcaagaaa gctctgttaa aaaataggca aagggcctgc 4741 tccctggtgg ctcacatctg taattccgac actttgggag gctgaggcag gaggatcact 4801 tgaggccagg agtttcaggc cagctgggca acataggggg accccatctc tagaaaaaat 4861 ttt // LOCUS HUMINT04 2746 bp ds-DNA PRI 07-AUG-1990 DEFINITION Human leukocyte adhesion protein p150,95 alpha subunit gene, exons 16 - 21. ACCESSION M29484 Y00093 KEYWORDS integrin; leukocyte adhesion glycoprotein; protein p150,95. SEGMENT 4 of 7 SOURCE Human DNA, (library pWE15), clone 30.1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 382 to 2672; exons only) AUTHORS Corbi,A.L., Miller,L.J., O'Connor,K., Larson,R.S. and Springer,T.A. TITLE CDNA cloning and complete primary structure of the alpha subunit of a leukocyte adhesion glycoprotein JOURNAL EMBO J. 6, 4023-4028 (1987) STANDARD full staff_entry REFERENCE 2 (bases 1 to 2746) AUTHORS Corbi,A.L., Garcia-Aguilar,J. and Springer,T.A. TITLE Genomic structure of an integrin alpha subunit, the leukocyte p150,95 molecule JOURNAL Unpublished (1989) Center for Blood Res., Boston MA 02115 STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.Garcia-Aguilar, 19-OCT-1989. FEATURES from to/span description pept + 382 512 integrin alpha subunit precursor, exon 16 628 791 integrin alpha subunit precursor, exon 17 924 1078 integrin alpha subunit precursor, exon 18 1656 1787 integrin alpha subunit precursor, exon 19 1875 1948 integrin alpha subunit precursor, exon 20 2531 + 2672 integrin alpha subunit matp + 382 512 integrin alpha subunit 628 791 integrin alpha subunit 924 1078 integrin alpha subunit 1656 1787 integrin alpha subunit 1875 1948 integrin alpha subunit 2531 + 2672 integrin alpha subunit pre-msg < 1 > 2746 P150,95 mRNA and introns IVS < 1 381 P150,95 intron O IVS 513 627 P150,95 intron P (no splice consensus) IVS 792 923 P150,95 intron Q IVS 1079 1655 P150,95 intron R IVS 1788 1874 P150,95 intron S IVS 1949 2530 P150,95 intron T IVS 2673 > 2746 P150,95 intron U BASE COUNT 602 a 821 c 746 g 577 t ORIGIN Chromosome 16p11-13.1. 1 gaattcctat cctgagcatg gctaaactct gagctaatag tatcattata gaaagatgag 61 gaaacggagg cacagacaga ttgagtcctt gcccacggcc tcgtggctca tacgtggagg 121 agtcagaatt ggaactagag actgatcgaa tgaatgacac tcgggtcacc aggacacctt 181 cctatctcca ctcttacatc tgtttcttag caatcatctc ccaactccta cctcctcttt 241 tcaggttctt cttggtgaca tctgttacaa ctcacccctt ctctcccttt ccgatggtcc 301 tacctccata ttccccttgt tacttatttc caacttcttc cctagtttcc atcttgattc 361 acccttctct cctctggcca gcggatcgcg ggctcccagc tctcctccag gctgcagtat 421 tttgggcagg cactgagcgg gggtcaagac ctcacccagg atggactggt ggacctggct 481 gtgggggccc ggggccaggt gctcctgctc aggtgagagc agactttctc agaggctccc 541 catgtggtcc taggttcaga tgggggtgcc cacccacgtg gtgctcccac cagcgacggc 601 tgtcctcagc tcggtgctct gcccgcagac cagacctgtg ctctgggtgg gggtgagcat 661 gcagttcata cctgccgaga tccccaggtc tgcgtttgag tgtcgggagc aggtggtctc 721 tgagcagacc ctggtacagt ccaacatctg cctttacatt gacaaacgtt ctaagaacct 781 gcttgggagc cgtgagtccc ctcccctcca acccaggaca ccctgacctc tggagtcccc 841 catcccaggc ccctgtctcc caccctgctc attgtccacc caaggagttc ctgtctcaac 901 gccgtccctg cgaccgccta caggtgacct ccaaagctct gtgaccttgg acctggccct 961 cgaccctggc cgcctgagtc cccgtgccac cttccaggaa acaaagaacc ggagtctgag 1021 ccgagtccga gtcctcgggc tgaaggcaca ctgtgaaaac ttcaacctgc tgctcccggt 1081 gcgtctgggc atgaacgtgg gtggcggccg cgctggggct ggcagaaggc agggcaggga 1141 gagaacaggc tgtgttccgg cctccctgtg gctcagccca gcacaggacc agccatgcag 1201 gacgtgctta ctgcacgtta gccagtgagt gagtgagcga gcaaacaagt gatgagatcg 1261 tctgcaattt ccagggccac acgattggat ttcaggaaag agaattgggc aacctgagag 1321 agctctgggc ttaccttctg gcttttcagg cattcactga cagggttatc gagctgctcc 1381 tggagacagc cttgcctggg ccatgggcat aggtggccaa aacagtcatt gctgatcggg 1441 aggtctgggg gggggaggaa aaaaacaaag acaaacaagg ggagaggaca gagagggtgt 1501 cagggaggca tcctgaaggc ggtgacgctg agcaggctct ggaggaagtg aagcagagcg 1561 ggagctgggc agaggcagga taagaactgc ggatgaggcc gagcgcagct cttaccctcc 1621 ccttaccctc gctccccgcg acgcccgtcc cccagagctg cgtggaggac tctgtgaccc 1681 ccattacctt gcgtctgaac ttcacgctgg tgggcaagcc cctccttgcc ttcagaaacc 1741 tgcggcctat gctggccgcc gatgctcaga gatacttcac ggcctccgtg agtcctggca 1801 ctgggtctcc cagagagggt gcacagcgtg gggcctgggt ctcggagaaa accccccgtt 1861 gccttcccac gcagctaccc tttgagaaga actgtggagc cgaccatatc tgccaggaca 1921 atctcggcat ctccttcagc ttcccagggt gagcgcccca ccttagatgc cctactgccc 1981 cagcctcctt cctggaatct gggactcctg cctctgctct ccctaacatt gtctcatcct 2041 atagtcaaaa cccaggtgtc ttggctgggc acagtggctc actcctgtaa tccagcactt 2101 tgggaggccg aggtgggagg acttttgagg ccaggagtta gggttacgac ctgggcaaca 2161 gagcgacacc catttccaca aaaacaaaac aacaacaaca acaacaacaa caacaacaac 2221 aacaacatca cttgagtgtg gtagagcatg cctatagtcc cagctacttg ggaggctgaa 2281 gcttaaggct tgcttgagct ctggagttgg aggtctgcag tgagccataa tcacaccact 2341 gcactccagc ctgggtgaaa gagcaggact ctgtctctta aaaaaaaaga agaagaagaa 2401 gaagaagaag aagaacccag gggtccgtcc cctgtctatc tcccaaatcc ccacccaccc 2461 cattttatcc cagaccattt ctagcctcag tcacagaatc atcttatcct ttccttcacc 2521 tgatacccag cttgaagtcc ctgctggtgg ggagtaacct ggagctgaac gcagaagtga 2581 tggtgtggaa tgacggggaa gactcctacg gaaccaccat caccttctcc caccccgcag 2641 gactgtccta ccgctacgtg gcagagggcc aggtgcacct ctggggaagg aggaggaggc 2701 agggctgggc gttagcgtag attcccgtgc gggttcagaa cccggg // LOCUS HUMINT05 1006 bp ds-DNA PRI 07-AUG-1990 DEFINITION Human leukocyte adhesion protein p150,95 alpha subunit gene, exons 22 - 24. ACCESSION M29485 Y00093 KEYWORDS integrin; leukocyte adhesion glycoprotein; protein p150,95. SEGMENT 5 of 7 SOURCE Human DNA, (library pWE15), clone 30.1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 202 to 665) AUTHORS Corbi,A.L., Miller,L.J., O'Connor,K., Larson,R.S. and Springer,T.A. TITLE CDNA cloning and complete primary structure of the alpha subunit of a leukocyte adhesion glycoprotein JOURNAL EMBO J. 6, 4023-4028 (1987) STANDARD full staff_entry REFERENCE 2 (bases 1 to 1006) AUTHORS Corbi,A.L., Garcia-Aguilar,J. and Springer,T.A. TITLE Genomic structure of an integrin alpha subunit, the leukocyte p150,95 molecule JOURNAL Unpublished (1989) Center for Blood Res., Boston MA 02115 STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.Garcia-Aguilar, 19-OCT-1989. FEATURES from to/span description pept + 203 319 integrin alpha subunit precursor, exon 22 404 483 integrin alpha subunit precursor, exon 23 582 + 665 integrin alpha subunit precursor, exon 24 matp + 203 319 integrin alpha subunit 404 483 integrin alpha subunit 582 + 665 integrin alpha subunit pre-msg < 1 > 1006 P150,95 mRNA and introns IVS < 1 202 P150,95 intron U IVS 320 403 P150,95 intron V IVS 484 581 P150,95 intron W IVS 666 > 1006 P150,95 intron X BASE COUNT 228 a 286 c 229 g 263 t ORIGIN Chromosome 16p11-13.1. 1 ttctatcctg gtgacagagt gagacctggt ctcaaaacaa acaaacaaac aaaatataag 61 cttaaggtgg gctccaggaa gctttatcac tacttcgtgg cgtgtctttg gaatgctgtt 121 atattaggtt ggtgcaaaag taattgggtt tttgccattg ctttcaattt caactaatac 181 tcctctactt tctcatgcct agaaacaagg gcagctgcgt tccctgcacc tgacatgtga 241 cagcgcccca gttgggagcc agggcacctg gagcaccagc tgcagaatca accacctcat 301 cttccgtggc ggcgcccagg tcagcctggc ttctgtcccc tcactgctcc cctgccccac 361 cctgtcttta ctgctctgtg acctctcagt tccttttcct cagatcacct tcttggctac 421 ctttgacgtc tcccccaagg ctgtcctggg agaccggctg cttctgacag ccaatgtgag 481 caggtgagcc gggccatggc caggggcagt gcctcatctc cagcctcaca ccccattctc 541 ctctggggcc tctggcaact gagtctctcc tctttctcca gtgagaacaa cactcccagg 601 accagcaaga ccaccttcca gctggagctc ccggtgaagt atgctgtcta cactgtggtt 661 agcaggtcac aggtacccac tgcaggaaaa agggttcttc tctctgaccc tcaaaaagaa 721 aaaaaaaaaa aaggccttga aacgctgcca cagagggtga gataaggtgt ttgaaagtaa 781 aaggtcaggt gtttcagaag acaccttcct tcagccaatg ccttcctcga atttgctgtg 841 tgccaggcag ggtgctgtgg ttattttcca tacattcatt tgacattcat tgaagattta 901 ctgagccccc attatgtgtg atcaaaccag acatgaaccc tcgccttgtg ggtgtgcctt 961 gctggatgtc tcctgtgttc cactctcact gcactgcatg ctgagt // LOCUS HUMINT06 1904 bp ds-DNA PRI 07-AUG-1990 DEFINITION Human leukocyte adhesion protein p150,95 alpha subunit gene, exons 25 - 30. ACCESSION M29486 Y00093 KEYWORDS integrin; leukocyte adhesion glycoprotein; protein p150,95. SEGMENT 6 of 7 SOURCE Human DNA, (library pWE15), clone 30.1. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 86 to 1528; exons only) AUTHORS Corbi,A.L., Miller,L.J., O'Connor,K., Larson,R.S. and Springer,T.A. TITLE CDNA cloning and complete primary structure of the alpha subunit of a leukocyte adhesion glycoprotein JOURNAL EMBO J. 6, 4023-4028 (1987) STANDARD full staff_entry REFERENCE 2 (bases 1 to 1904) AUTHORS Corbi,A.L., Garcia-Aguilar,J. and Springer,T.A. TITLE Genomic structure of an integrin alpha subunit, the leukocyte p150,95 molecule JOURNAL Unpublished (1989) Center for Blood Res., Boston MA 02115 STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by J.Garcia-Aguilar, 19-OCT-1989. FEATURES from to/span description pept + 86 164 integrin alpha subunit precursor, exon 25 280 387 integrin alpha subunit precursor, exon 26 505 588 integrin alpha subunit precursor, exon 27 788 901 integrin alpha subunit precursor, exon 28 1044 1145 integrin alpha subunit precursor, exon 29 1417 + 1527 integrin alpha subunit precursor, exon 30 matp + 86 164 integrin alpha subunit 280 387 integrin alpha subunit 505 588 integrin alpha subunit 788 901 integrin alpha subunit 1044 1145 integrin alpha subunit 1417 + 1527 integrin alpha subunit pre-msg < 1 > 1904 P150,95 mRNA and introns IVS < 1 85 P150,95 intron X IVS 165 279 P150,95 intron Y IVS 388 504 P150,95 intron Z IVS 589 787 P150,95 intron AA IVS 902 1043 P150,95 intron AB IVS 1146 1416 P150,95 intron AC IVS 1528 > 1903 P150,95 intron AD BASE COUNT 381 a 545 c 525 g 453 t ORIGIN Chromosome 16p11-13.1. 1 accacctgtc ctctcatgct ctagccaatg ccttctgcag atgcccatgg tagttcacat 61 ccacttatgc gtcttctctc tccagccacg aacaattcac caaatacctc aacttctcag 121 agtctgagga gaaggaaagc catgtggcca tgcacagata ccaggtcagg tggtggtgta 181 cgcaggaaga ccttgggcat ggggtgggag gctgggtagc cggagactgg ggagggattt 241 ggctttggcg tggctctgcc ctcagtgccc tctgtgcagg tcaataacct gggacagagg 301 gacctgcctg tcagcatcaa cttctgggtg cctgtggagc tgaaccagga ggctgtgtgg 361 atggatgtgg aggtctccct cccccaggta cccaaggact gcatgtggct cctccacgaa 421 tgccctttct acctggattc cttgtgcccc atgtgggtcc ctgatgtccc agctgagaca 481 cttgttctct gcattttccc ccagaaccca tcccttcggt gctcctcaga gaaaatcgcg 541 ggcccagcat ctgacttcct ggcgcacatt cagaagaatc ccgtgctggt gaggagggct 601 ctgggtctgg ccctcactgt aggcccacat cagaggaatt taacccagga gttcatgttc 661 catatccatc ctgctgaagt accctcttgc attcggatat ggccgctgcc ctcaagtcac 721 acgcataatg ctgcctccca ccttcacact catctttctc agccccatgc tatttatctg 781 cccccaggac tgctccattg ctggctgcct gcggttccgc tgtgacgtcc cctccttcag 841 cgtccaggag gagctggatt tcaccctgaa gggcaacctc agctttggct gggtccgcca 901 ggtgtgtggg tgcaacgaca gagcccctgc cccagactca ggcgggacct ggcatgtctg 961 tgcccatctg caagccaggg cacccccaga gctctgagcc tcccccagag ccagttcaac 1021 aggtttcccc cacccctttg cagatattgc agaagaaggt gtcggtcgtg agtgtggctg 1081 aaattacgtt cgacacatcc gtgtactccc agcttccagg acaggaggca tttatgagag 1141 ctcaggtaga gaccatgtgg agggcagcga ccaggcagga aagagggtcc caagggctac 1201 atctgtggtg ctgggtgggg ggtttgcaag ccttggggga ggagggtgaa ggcctctggg 1261 caggatagct gtccctaagg gcacgggtgc tgctgtgtct cacctcttgg agcagggcct 1321 ggggaaggag gggagggagt taaaggttgg ggagcctggg aggagtctgg gatagtagga 1381 ggatgggagt ctctgacagg gtcacttcca cttcagacga caacggtgct ggagaagtac 1441 aaggtccaca accccacccc cctgatcgta ggcagctcca ttgggggtct gttgctgctg 1501 gcactcatca cagcggtact gtacaaagtg agtgttttat gccacccttg acaccaccag 1561 catctggtcc cgctcttttt gcagagtgag aaggagctca ctttgaaggc agaggcacat 1621 tcttactggg tcacttcata tgagaaactg cttcccacct gcaatgtcac cgtgccccag 1681 tggccccctg ctttgtgatt cccaggcttc ctctaatatt tctccctttc tttcctgctc 1741 ttctccatca ttctacgtgt tcctgacagc agattatcat ataaaagcac agacctgggt 1801 tgaatgcgac atcaccacgg gttcttttgt cttgaccata ggccagtgtc tgctccactc 1861 tgggccttga tttccatgtg aggtgatatc acccagctca taga // LOCUS HUMINT07 149 bp ds-DNA PRI 07-AUG-1990 DEFINITION Human leukocyte adhesion protein p150,95 alpha subunit gene, exon 31. ACCESSION M29487 Y00093 KEYWORDS integrin; leukocyte adhesion glycoprotein; protein p150,95. SEGMENT 7 of 7 SOURCE Human DNA, (library pWE15), clone 30.1, and cell line HL-60, cDNA to mRNA, clone lambda-X47. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 44 to 149) AUTHORS Corbi,A.L., Miller,L.J., O'Connor,K., Larson,R.S. and Springer,T.A. TITLE CDNA cloning and complete primary structure of the alpha subunit of a leukocyte adhesion glycoprotein JOURNAL EMBO J. 6, 4023-4028 (1987) STANDARD simple automatic REFERENCE 2 (bases 1 to 149; revises [1]) AUTHORS Corbi,A.L., Garcia-Aguilar,J. and Springer,T.A. TITLE Genomic structure of an integrin alpha subunit, the leukocyte p150,95 molecule JOURNAL Unpublished (1989) Center for Blood Res., Boston MA 02115 STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [2] kindly submitted by J.Garcia-Aguilar, 19-OCT-1989. FEATURES from to/span description pept + 44 148 integrin alpha subunit precursor, exon 31 matp + 44 145 integrin alpha subunit pre-msg < 1 > 149 P150,95 mRNA and introns IVS < 1 85 P150,95 intron AC BASE COUNT 40 a 41 c 37 g 31 t ORIGIN Chromosome 16p11-13.1. 1 actgaatggg cttcctgagt ttcttcttcg tcctcccccc taggttggct tcttcaagcg 61 tcagtacaag gaaatgatgg aggaggcaaa tggacaaatt gccccagaaa acgggacaca 121 gacccccagc ccgcccagtg agaaatgat // LOCUS ECOKDPDE 3600 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli transmembrane protein (kdpD) and cytoplasmic protein (kdpE) genes, complete cds. ACCESSION M36066 KEYWORDS cytoplasmic protein; kdpD gene; kdpE gene; transmembrane protein. SOURCE E.coli (strain K12) DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 3600) AUTHORS Walderhaug,M.O., Daniel,J.M., Hesse,J. and Epstein,W. TITLE KdpD and KdpE, regulatory proteins for the kdp operon of Escherichia coli, are members of the two component sensor-effector class JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.O.Walderhaug, 03-JUL-1990. Author address: M.O.Walderhaug University of Illinois at Chicago Department of Microbiology and Immunology Box 6998, Chicago, IL 60680 FEATURES from to/span description pept 141 2825 transmembrane protein (kdpD) pept 2822 3499 cytoplasmic protein (kdpE) mRNA 68 > 3499 kpd operon signal 30 36 -35 region signal 55 60 -35 signal binding 130 133 ribosome binding site BASE COUNT 789 a 968 c 1051 g 792 t ORIGIN 16 min on K12 map. 1 acgcgtggcg aaagcgcgta atctcagcgt tgaacagctc acgcaactga tcgcaaaata 61 cagccaacaa ccgctggtga aatatatcgg ccagccggtt gtcaacattg ttgaactcaa 121 tctggcgctg gataaacttg atgaataacg aacccttacg tcccgacccc gatcgtctgc 181 tggaacaaac tgccgcgccg catcggggga agctgaaagt tttcttcggt gcctgtgcag 241 gcgtcgggaa gacctgggcg atgctggcag aagcccagcg actgcgggcg caagggctgg 301 atattgtggt tggcgtggta gaaacccacg ggcgaaaaga taccgccgcc atgctggaag 361 ggctggctgt tctgccgtta aaacgccagg cgtaccgtgg gcggcatatc agcgagtttg 421 atctcgatgc cgccctcgcc cgccgcccgg cgctgatctt aatggacgaa ctggcgcaca 481 gtaatgcgcc aggttcccgt catcccaaac gctggcagga tatcgaagaa ctgctggaag 541 ctggcattga tgttttcact accgtcaacg ttcagcatct ggaaagtctg aatgatgtgg 601 tcagcggcgt caccggaatt caggtacggg aaaccgtgcc cgatcctttt ttcgatgccg 661 ccgacgacgt ggtgctggtg gacttgcccc cggacgatct gcgccagcgg ctgaaagaag 721 gcaaagtcta tattgccggg caggcggagc gcgccattga acattttttc cgcaaaggta 781 atctgatcgc cctgcgcgaa ctggcactgc gccgtactgc cgatcgcgtt gatgagcaaa 841 tgcgcgcctg gcgggggcat cctggcgaag agaaagtgtg gcacacgcgc gacgcgatcc 901 ttttatgcat cggccataac accggcagcg aaaaactggt ccgcgcagcg gcgcggctgg 961 cgtcacggct gggtagcgtc tggcacgcgg tgtatgttga aacccctgcc ctgcaccgct 1021 taccggaaaa aaaacgtcgg gcaattctca gcgccttacg tctggccgag gaactgggcg 1081 cggagacggc aacactttct gatccagcgg aagagaaagc ggtagtgcgt tatgcccgtg 1141 aacataatct cggcaagatt attctcggtc gcccggcctc gcgccgctgg tggcgtcggg 1201 aaacgtttgc tgaccgactg gcgcgcatcg cccccgatct cgatcaggtg ctggtcgcgc 1261 ttgatgaacc acccgcccgc acgattaaca acgcgccgga taaccgctct tttaaagaca 1321 agtggcgtgt acaaattcag ggatgcgtgg ttgccgccgc gttatgcgcc gttatcacct 1381 taattgccat gcagtggctg atggcgtttg atgccgccaa cctggtgatg ctgtatctgc 1441 ttggcgtggt ggtggtggcg ctattttatg gacgctggcc ttcagtggtt gccaccgtca 1501 ttaatgtagt gagtttcgat ctctttttta tcgccccacg cggcacgctc gccgtctctg 1561 atgtgcaata tctgctgacc ttcgcggtga tgttaaccgt cgggctggtg atcgggaacc 1621 ttactgctgg cgtgcgttat caggcgcggg tagcccgtta ccgcgagcaa cgcacacggc 1681 acttatatga aatgtcgaaa gctctggcgg tgggccgcag tccgcaggat atcgctgcca 1741 ccagcgaaca atttattgcc tccacgtttc atgcccgcag tcaggtgttg ttgcccgatg 1801 acaacggtaa attgcagccg ttaacacatc cgcaaggaat gacgccgtgg gacgatgcca 1861 tcgcgcagtg gagttttgat aaaggcctgc ctgcgggcgc gggcaccgac acgttacccg 1921 gtgtaccgta ccagattttg ccgctaaaaa gcggcgagaa aacctacggg ctggtggtgg 1981 tggagccggg gaatctgcgc cagttgatga tcccggaaca gcagcgcctg ctggagacgt 2041 ttacgctgtt agtcgccaat gcccttgagc ggctgacgct aaccgccagc gaagaacagg 2101 cgcggatggc aagcgaacgt gaacagatcc gcaacgccct gctggcggcg ctttcgcatg 2161 atttacgcac gccgcttacg gtgctgtttg gtcaggcaga aatcttaacg ctcgatctgg 2221 caagcgaagg atcaccccac gcccgccagg ccagcgagat ccgtcagcat gtgctgaaca 2281 ctacccgact ggtgaataat ctactggata tggcgcgaat tcagtccggc ggctttaatt 2341 tgaagaaaga gtggttaacg ctggaagaag tagtcggcag cgcgctgcaa atgctggaac 2401 cgggtttatc gtcgcccatc aatctttctc tgccagaacc gctgacctta atccacgttg 2461 acgggccact ctttgaacgg gtgctgatta atctgctgga gaacgcggtg aaatatgcgg 2521 gtgcgcaggc cgaaattggt atcgatgccc acgttgaggg cgaaaatcta caactggatg 2581 tctgggataa cggccccggt cttccgccag gccaggagca gacgatattt gataagtttg 2641 ctcgcgggaa taaagagtcg gcagtaccgg gggtagggct tggactggca atttgtcggg 2701 cgatagtgga tgtacacggg ggcactatta ccgcgttcaa ccgaccggaa ggtggtgcct 2761 gttttcgtgt tacacttccc cagcaaactg cccctgaact tgaagaattt catgaggata 2821 tgtgacaaac gttctgattg ttgaagatga acaggctatt cgtcgctttc tgcgcacggc 2881 gctggagggc gacgggatgc gcgtctttga ggccgaaacg ctgcaacgcg gcttgctgga 2941 agcggcaacc cgtaagccag atttgattat tctcgatctc ggcctgcccg atggtgatgg 3001 gattgagttt atccgcgacc tgcgccagtg gagccgggtg ccggtgattg tgctttccgc 3061 acgcagcgaa gagagcgaca aaatcgccgc gctggatgcc ggagcggatg attatctgag 3121 taagccgttt ggcattggcg aattgcaggc ccgtctgcgc gtcgcattac gccgccactc 3181 tgccaccacc gcgcccgatc cgctggtaaa attttccgat gttaccgtcg atttagccgc 3241 ccgcgtgatt caccggggtg aggaagaggt gcatctcaca ccaattgagt tccgccttgc 3301 tggtcgctgc tcaacaatgc cggaaaagta ctcacccagc ggcccagtcc ttaaccaggt 3361 gtgggggcca aacgcggtcg aacacagtca ctatttgcgt atttatatgg gacatctgcg 3421 acaaaaactg gaacaggatc ccgcccgccc acgccatttc attactgaaa ccggtattgg 3481 ctatcggttt atgctttgaa tattaatttt aatacagcct gccttttatt aattaaagcc 3541 gtaataataa atacggcttt ttatcttaaa caacacacaa aaataacaat tcaatatttt // LOCUS KAEUREX 4761 bp ds-DNA BCT 07-AUG-1990 DEFINITION K.aerogenes urease subunits A (ureA), B (ureB), C (ureC), and urease accessory protein (ureE, ureF and ureG) genes, complete cds. ACCESSION M36068 KEYWORDS urease; urease accessory protein. SOURCE K.aerogenes (strain CG253) DNA. ORGANISM Klebsiella aerogenes Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 4761) AUTHORS Mulrooney,S.B. and Hausinger,R.P. TITLE Sequence of the Klebsiella aerogenes urease genes and evidence for accessory proteins facilitating nickel incorporation JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by S.B.Mulrooney, 03-JUL-1990. Author address: S.B.Mulrooney Michigan State University Dept of Biochemistry East Lansing, MI 48824 FEATURES from to/span description pept 264 566 urease subunit A (ureA) pept 576 896 urease subunit B (ureB) pept 889 2592 urease subunit C (ureC) pept 2602 3078 urease accessory protein (ureE) pept 3080 3754 urease accessory protein (ureF) pept 3763 4380 urease accessory protein (ureG) site 4385 4424 transcription termination signal BASE COUNT 898 a 1542 c 1452 g 869 t ORIGIN 1 ctctcgccga acgtccctgg gtcggcactt tgctgtgcta tccggctacc gatgccctgc 61 tcgacggggt gcgcgacgcg ctggcgccgc tcggtctcta cgccggcgcc agcctgaccg 121 accgcctgct gacggtgcgt ttcctcagtg acgataatct gatttgccag cgggtgatgc 181 gcgacgtatg gcagtttctg cgccctcatc tcaccggtaa atctcccgta cttccccgaa 241 tctggctgac ttaagagaac gttatggaac tgaccccccg agaaaaagac aagctgttgc 301 tgtttaccgc cgcgctggtg gcggagcgtc gcctggcccg cggcctgaag ctcaactatc 361 cggagtccgt ggccctgatc agcgccttta ttatggaagg cgctcgggac ggcaaaagcg 421 tggcctcgct gatggaggaa ggccgtcacg tcctgacccg cgagcaggtg atggagggcg 481 tcccggaaat gatcccggat atccaggtcg aagccacctt cccggacggc tcgaagctgg 541 tcaccgttca caacccgatt atctgaggta gcgccatgat ccccggtgaa tatcacgtta 601 agcccggtca gatagccctg aataccggcc gggcaacctg tcgcgtggtc gttgagaacc 661 acggcgatcg gccgattcag gtcggttcgc actaccattt cgccgaggtt aacccggcgc 721 tgaagttcga ccgtcagcag gccgccggct atcgcctgaa tatcccggcg ggcacggcgg 781 tacgctttga acccggccag aaacgcgagg tcgagctggt ggccttcgcc ggtcaccgcg 841 ccgtcttcgg cttccgcggc gaggtcatgg gccctctgga ggtaaacgat gagtaatatt 901 tcacgccagg cctatgccga tatgttcggc cccaccgtcg gcgacaaggt gcgcctggca 961 gataccgagc tgtggatcga ggtggaggac gatttgacca cctacgggga agaggtcaaa 1021 ttcggcggcg gcaaagtgat ccgcgacggc atgggccagg gacagatgct ggccgccgac 1081 tgtgtcgacc tggtgctcac caacgcgttg atcgtcgatc actgggggat cgttaaggcc 1141 gatatcggcg tgaaggacgg ccggatcttc gccatcggca aagccggcaa ccccgacatc 1201 cagcccaacg tcaccatccc catcggcgct gcgacggaag tgatcgccgc cgaaggaaaa 1261 attgtcaccg ccggcgggat cgatacccat attcactgga tctgtccgca gcaggcggaa 1321 gaggcgctgg tctctggcgt gaccaccatg gtcggcggcg gcaccggccc ggccgcgggc 1381 acccatgcca ccacctgcac cccgggcccg tggtatatct cacgcatgct gcaggcggcc 1441 gacagcctgc cggtcaatat cggcctgctg ggcaagggaa acgtttctca gccggatgcc 1501 ctgcgcgagc aggtggcggc aggcgttatt ggcctgaaga tccatgagga ctggggcgcc 1561 accccggcgg cgatcgactg tgcgttaacc gtcgccgatg aaatggacat ccaggtcgcc 1621 ctgcacagcg acaccctgaa tgaatccggt tttgtggaag acaccctcgc cgccatcggc 1681 gggcgcacca tccacacctt ccataccgaa ggggccggcg gcggccatgc gccggacatc 1741 atcaccgcct gcgcccaccc gaacattttg ccgtcgtcca ccaacccaac gctgccctac 1801 accctcaaca ccatcgatga acatctcgat atgctgatgg tctgccacca tctggacccg 1861 gacatcgccg aggacgtggc ctttgccgag tcgcgcattc gccgggaaac catcgctgcg 1921 gaagacgtgc tgcacgatct cggcgccttc tcgctcacct cctccgattc gcaggccatg 1981 ggccgcgtcg gggaagtgat tctccgcacc tggcaggtgg cgcatcgcat gaaggtgcag 2041 cgcggagcgc tggcggagga gaccggggat aacgacaact tccgcgtgaa gcgctacatc 2101 gccaaataca ccatcaaccc ggcgctgacc cacggcatcg cacacgaagt cggatccatt 2161 gaggtgggta agctggctga cctcgtggtc tggtcaccag ccttcttcgg cgtgaaaccg 2221 gccaccgtga tcaaaggcgg catgatcgcc atcgcgccga tgggcgatat caatgcctct 2281 attccgaccc cgcagccggt gcactaccgc ccgatgtttg gcgcgctggg cagcgcccgc 2341 catcactgcc gcctcacctt cctgtcgcag gcggcggcag ccaatggcgt tgccgagcgg 2401 ctgaacctgc gcagcgcgat cgccgtggtg aaaggctgcc gtacggtgca gaaagccgac 2461 atggtgcaca acagtctgca gcctaacatc accgtcgacg cccagaccta tgaggtgcgg 2521 gtggatggcg aacttatcac cagcgagccg gcagacgttc tgccgatggc gcaacgatat 2581 tttctgtttt aaggagagcg gatgctttat ttaactcaac gtctggagat ccccgccgcc 2641 gcgaccgcca gcgttacgct gccgattgat gttcgcgtca aaagccgggt taaggtcacc 2701 ctcaacgatg gccgggatgc cggcctgctg ctgccccgcg gcctgctact acgcggcggc 2761 gatgtgctca gcaacgaaga aggcaccgag tttgtgcagg tgattgccgc tgatgaagag 2821 gtgtcggtag tgcgctgcga cgatccgttt atgctggcga aggcctgcta ccacctcggc 2881 aaccgtcacg tgccgctgca gatcatgccg ggcgagctgc gctaccatca cgatcacgtg 2941 ctggacgata tgctgcgcca gttcggcctg acggtgacct ttggccagct gccgttcgag 3001 ccggaagccg gcgcttacgc cagcgagagc cacggtcatc atcatgctca tcatgaccac 3061 cacgctcaca gccactagca tgtcgacagc ggaacaacgc ctgcggctga tgcagctggc 3121 cagcagcaac ctgccggtag ggggttacag ctggtcccag gggctggagt gggctgtgga 3181 agccggctgg gtgctggacg tcgcggcctt cgagcgctgg cagcgacgcc agatgacgga 3241 aggctttttt accgttgacc tgccgctgtt cgcccgcctg taccgcgcct gcgaacaagg 3301 cgatatcgct gcggcccagc gctggaccgc ctatctgctg gcctgccggg aaactcgtga 3361 actgcgggag gaagagcgca accgcggcgc ggcgtttgcc cgtctgctga gcgactggca 3421 gccggactgt ccgccgccgt ggcgctccct gtgccagcaa agccagctcg ccgggatggc 3481 ctggctcggc gtgcgctggc gtatcgccct gcccgagatg gccctcagcc tgggctatag 3541 ctggattgag agcgccgtga tggccggcgt caagctggtc cccttcggcc agcaggccgc 3601 ccagcagctg attttacgtc tttgtgacca ctacgcggcc gagatgcccc gcgcgctggc 3661 cgcgccggac ggcgatatcg gatcggccac cccgctcgcc gccatcgcct ctgcccggca 3721 tgaaacccaa tactctcgat tattccgttc ctaggagaag ccatgaactc ttataaacac 3781 ccgctgcgcg tcggcgtcgg cggcccggtc ggctccggta aaaccgctct gctggaagcg 3841 ctgtgtaaag cgatgcgcga tacctggcag ctggcggtgg tcactaacga catctatacc 3901 aaagaagatc agcgcatcct caccgaagcg ggcgcgctgg cgcctgaacg catcgtcggt 3961 gtggaaaccg gcggctgccc gcatacggcg atccgcgaag atgcctcaat gaacctcgcc 4021 gccgtggaag cgctgagtga aaagttcggt aacctcgacc ttatcttcgt ggaaagcggc 4081 ggcgataacc tgagcgccac cttcagcccg gagctggcgg atctgaccat ctacgtcatc 4141 gatgtggccg aaggggagaa gatcccgcgc aaaggcggac cggggatcac caaatccgat 4201 ttcctggtga tcaataaaac cgaccttgcc ccctatgtgg gcgcgtcgct ggaggtgatg 4261 gcgagcgata cccagcgtat gcgcggcgat cgcccatgga ccttcaccaa tctgaagcag 4321 ggcgacggcc tgagcaccat tatcgccttc ctcgaagaca aaggcatgct tggcaaatag 4381 gcctgttgca ccagccgggc gcaagcgcgt ccggatggtg cagcctctgc tctctcttta 4441 tatcatcctg cctccacctc cgcgccacgc ctgccctgca atatggcata aggtttgcta 4501 attcaagtca tgcctaacca ttaaggaatg actatgtcat cactggatct taaccctgaa 4561 ttacccgcga caacgcggac ttccggtacc cgggaaacct tagaagatta caccttacgt 4621 tacgccccgc tgagcttccg ccgctggggt ccgggcgtcg tcgcggtcac cgcgctgggc 4681 ggcatcgcct atctggccga cttttccatc ggcgccagca tcggtatggc ctggggcacc 4741 agcaacgcca tctattcgat c // LOCUS MUSTCP1X 1714 bp ss-mRNA ROD 07-AUG-1990 DEFINITION Mouse t-complex protein (Tcp-1x) mRNA, 3' end. ACCESSION M35797 KEYWORDS t-complex protein. SOURCE Mouse (strain C57BL/6J) 8.5 day-old embryo, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 1714) AUTHORS Dudley,K., Shanahan,F., Burtenshaw,M., Evans,E.P., Ruddy,S. and Lyon,M.F. TITLE Isolation and characterisation of a cDNA clone corresponding to the mouse t-complex gene Tcp-1x JOURNAL Genet. Res. (1990) In press STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by K.Dudley, 29-JUN-1990. FEATURES from to/span description pept < 1 875 t-complex protein (Tcp-1x) BASE COUNT 454 a 387 c 445 g 428 t ORIGIN Chromosome 17, A2/A3 junction. 1 taaaacgacg gccagtgaat tcatgtctta cgggcaagga ggatatgagc aagcctcctc 61 acttgactca cctgagaaca ggagtcagga tgggtgaggt gccactggct gacagcatac 121 tctgtgatgg tctgacagat gcctttcaca actaccacat gggcatcaca gctgaaaacg 181 tagccaaaaa atggcaagtg agcagagagg cccaggacaa ggttgcagtt ctgtcacaga 241 acagggcaga gactgctcag aaagctggcc actttgacaa ggagattgtg ccagtgctgg 301 tgtcttccag aaaaggtctt actgaagtga aaatcgatga atttccccgt catgggagta 361 accttgaagc catgggaacg ctgaaacctt actttcttac tgatgggaca ggaactgtca 421 ccccagcgaa cgcatcagga atgaacgatg gcgctgctgc tgtggtcctt atgaagaaga 481 cagaagctga gaggcggatg ctgaaacctt tagcaagaat agtctcctgg tcccaagccg 541 gtgtggagcc ttctgttatg ggagtaggac caattccagc cataaagcaa gctgttgcaa 601 aggcaggctg gtccctggag gatgttgacc tgtttgaaat caatgaagcc tttgcagcgg 661 tgtctgcggc aatagctaaa gaacttggat taaaccccgg gaaggtcaac atcgatggag 721 gagccattgc cttgggccat cctctgggag catctggctg caggattcta gtgaccttgc 781 tgcacaccct ggagagagtg ggcgggaccc gtggtgttgc agccctgtgc attgggggtg 841 ggatgggagt cgcaatgtgt gttcagagag ggtgaactgc atgacagcca ccaccttgga 901 cagttcttgt taaatcagtg caacactaag cagaaaggga aaccagagga ccaaactgag 961 gacaggaacc caggtggaca gcttgctgta ctttaatgtg agacacccaa ggctacggca 1021 ttcgacctga cactgttgta aataagaggg aaatccaatc agtcatcaag ggctccagag 1081 tgaacagcat tttcataact tccatgttta tcgtctttca tttctggtga tttctctgat 1141 cattgttttg tttttgtttc ttgtttgagt taggctacat atatgcctca aaatcgtttt 1201 gtagatcagg ttgactttga actcccggag atccaccttt ctgtgcctcc tgaatacttg 1261 aattaaaggc atgcaccatt atggcagggc ccccaaaatg atccattcaa aacatgggga 1321 ttcggcttct gttacgaact tcaggctctt cactttaact atggttggtt caaacgcccc 1381 tgcgtgcctg tctctcggtt tcccattgat caaatcaaga ccaatcctgt agtgaaagtc 1441 ggattcagtg agcctcttcc aggctgaggt ggggtaggta ttccagctgt tctagtcaga 1501 agactggcag tgccaacaag tgtgcctctg gattgttgaa aggtgggcag caagcagcat 1561 ccacgtactt atttctctgc ttgacgggat gggatgttac ctgcttcaga tatctacctt 1621 gacttcccca aaatgatgac tggaactgga actgacagtc aaataaactc tttcctccct 1681 taaaaaaaaa aaccttgacc gtaagacatg aatt // LOCUS YSCAER2 2551 bp ds-DNA PLN 07-AUG-1990 DEFINITION S.cerevisiae heme-regulated and catabolite repressed genes repressor (AER2) gene, complete cds. ACCESSION M35861 KEYWORDS catabolite repressed gene repressor; heme-regulated gene repressor. SOURCE S.cerevisiae. ORGANISM Saccharomyces cerevisiae Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes; Endomycetales; Saccharomycetaceae. REFERENCE 1 (bases 1 to 2551) AUTHORS Zhang,M., Rosenblum-Vos,L.S., Lowry,C.V., Boakye,K. and Zitomer,R.S. TITLE A yeast protein with homology to the B-subunit of G-proteins is involved in repression of heme-regulated and catabolite repressed genes JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.S.Zitomer, 02-JUL-1990. Author address: R.S.Zitomer Department of Biological Sciences State University of New York Albany, NY 12222 FEATURES from to/span description pept 247 2388 repressor AER2 BASE COUNT 783 a 628 c 488 g 652 t ORIGIN 1 aaaacaaaat aacaagtaca taagtaaaca aatagagaga aattccccca tctaccccca 61 attgataaac atcagcgaag caagaacaac tggctgaaca cgtgcccctc tatctgtcct 121 tctgcaattg tttaattttc tttcacgcca agttaccttt cgcacaccac tactcttttt 181 ctattgtttt tttgtctttt ttgataagca ggggaagaaa gaaatcagct ttccatccaa 241 accaatatga ctgccagcgt ttcgaatacg cagaataagc tgaatgagct tctcgatgcc 301 atcagacagg agtttctcca agtctcacaa gaggcaaata cctaccgtct tcaaaaccaa 361 aaggattacg atttcaaaat gaaccagcag ctggctgaga tgcagcagat aagaaacacc 421 gtctacgaac tggaactaac tcacaggaaa atgaaggacg cgtacgaaga agagatcaag 481 cacttgaaac tagggctgga gcaaagagac catcaaattg catctttgac cgtccagcaa 541 cagcggcaac agcaacagca gcaacaggtc cagcagcatt tacaacagca acagcagcag 601 ctagccgctg catctgcatc tgttccagtt gcgcaacaac caccggctac tacttcggcc 661 accgccactc cagcagcaaa cacaactact ggttcgccat cggccttccc agtacaagct 721 agccgtccta atctggttgg ctcacagttg cctaccacca ctttgcctgt ggtgtcctca 781 aacgcccaac aacaactacc acaacagcaa ctgcaacagc agcaacttca acaacagcaa 841 ccacctcccc aggtttccgt ggcaccattg agtaacacag ccatcaacgg atctcctact 901 tctaaagaga ccactacttt accctctgtc aaggcacctg aatctacgtt gaaagaaact 961 gaaccggaaa ataataatac ctcgaagata aatgacaccg gatccgccac cacggccacc 1021 actaccaccg caactgaaac tgaaatcaaa cctaaggagg aagacgccac cccggctagt 1081 ttgcaccagg atcactactt agtcccttat aatcaaagag caaaccactc taaacctatc 1141 ccacctttcc ttttggatct agattcccag tctgttcccg atgctctgaa gaagcaaaca 1201 aatgattatt atattttata caacccggca ctaccaagag aaattgacgt tgagttacac 1261 aaatctttgg atcatacttc agttgtttgt tgcgtgaagt tcagtaacga tggtgaatac 1321 ttagccacag gctgcaacaa aactactcaa gtgtatcgcg tttcagatgg ttctctggtg 1381 gcccgtctat ctgacgattc tgctgccaat aaccatcgaa attcgatcac tgaaaataac 1441 accaccacgt ccacggataa caatacaatg acaaccacta ctaccaccac aattactacc 1501 acagcgatga cttcggcagc agaattggca aaagatgtgg aaaacctgaa cacttcgtct 1561 tccccatcat ccgacttgta tatccgttca gtgtgttttt ctccagatgg gaaatttttg 1621 gcaacaggtg ctgaagacag actgattaga atttgggata ttgaaaatag aaagattgtt 1681 atgattcttc aaggccacga acaagatatt tattcattgg actactttcc ctcaggtgac 1741 aaattagtct ccggttctgg tgaccgtacc gttcgtattt gggacttacg tacaggccag 1801 tgttcattga ctttatccat tgaagatggt gttaccaccg tcgctgtatc accaggtgat 1861 ggtaaataca tcgctgctgg ttctctagat cgtgctgtga gagtttggga ttccgagacc 1921 ggattcttgg tggaaagact agattcggaa aacgaatccg gtacaggcca caaggactct 1981 gtttatagcg ttgtcttcac tagagatgga caaagcgttg tatccggctc attagataga 2041 tctgttaagc tctggaattt gcagaatgca aacaacaaga gcgattcgaa aactccaaat 2101 tccggcactt gtgaagttac gtatatcggg cataaagact ttgtattgtc cgtggccacc 2161 acacaaaatg atgagtacat cttgtccggt tccaaagatc gtggtgtcct gttttgggat 2221 aagaaatccg gcaatccgtt attgatgttg caaggtcata ggaattcagt tatatctgtg 2281 gctgtggcaa acgggtctcc gctgggtcca gaatataacg tttttgctac tggtagcggt 2341 gattgtaaag caaggatttg gaagtataaa aaaatagcgc caaattaaga acagaacaca 2401 aaaggaacac tttacaaatg taactaacta aactattctt caattcattg tcattatatc 2461 tttctctcta ttctttttta tctacttatt tgttatgtta tgatccaggt acgctttaaa 2521 acaaacagtt actttcctca ccattcatcc c // LOCUS ALFHISH3A 1089 bp ds-DNA PLN 07-AUG-1990 DEFINITION Alfalfa histone H3 (H3-1.1) gene, complete cds. ACCESSION M35867 KEYWORDS histone H3. SOURCE Alfalfa (L. cv. Nagyszenasi) DNA, clone lambda-ALH3-1. ORGANISM Medicago sativa Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Rosidae; Rosales; Fabaceaea. REFERENCE 1 (bases 1 to 1089) AUTHORS Wu,S.C., Boegre,L., Vincze,E., Kiss,G.B. and Dudits,D. TITLE Isolation of an alfalfa histone H3 gene: Structure and expression JOURNAL Plant Mol. Biol. 11, 641-649 (1988) STANDARD simple staff_entry FEATURES from to/span description pept 285 695 histone H3 (H3-1.1) signal 93 97 CAAT box signal 168 174 TATA box signal 817 826 polyA signal signal 963 968 polyA signal signal 1008 1013 polyA signal site 2 6 GATCC motif site 38 43 ACGTCA consensus site 46 50 GATCC motif site 53 46 (c) CGCGGATC octamer BASE COUNT 305 a 271 c 178 g 335 t ORIGIN 1 ggatcctcat cacacaaaca aaacacatcc acacgccacg tcatcgatcc gcgtgtcgca 61 aatactccaa ataaacgaca cccgtcgatt aaccaataat caacggccac aattacaccc 121 cattcaccca cttctcaaat ttcaaaaccc gcacaaaatc atatcactat ataactcacc 181 cctttcatct cttcttcctc atcactctca attcttcaaa gcacaaaaac aaccttcaag 241 tttctctgtt tgatactgtt cttttcagtt atttttcata atcaatggca cgtaccaagc 301 aaaccgctcg caaatccacc ggtggcaaag ctccaaggaa gcaactcgcc acaaaagccg 361 ctcgcaaatc tgctccggcc accggcggag tgaagaaacc tcaccgtttc aggccaggaa 421 ccgtcgctct ccgtgagatc cgcaagtacc agaagagcac tgagctcctc atccgcaaac 481 tccccttcca gcgtcttgtc cgtgagatcg ctcaggattt caagactgat ctccgtttcc 541 agagctccgt cgtgtcggct ttgcaagaag cggccgaggc ttatctcgtc ggtctctttg 601 aggatactaa cctctgcgcc attcatgcta agcgtgtcac tatcatgcct aaggatatcc 661 agctcgctag gcgtatccgt ggcgagcgtg cttgatcttg ttgattcgct ttgttagggt 721 ttgtgtagat aggttcatga tgtagttaaa tcacaaaccg ttgctataag tttctctatg 781 gattttgtta tattgtaatg tgcttaacgc ttaatcaatg aaatcgatca tcttttgtta 841 aactctttgt tcaattactt atgctttttt tttatctttt cttaacccta attttctgtc 901 attttattac actttccgaa cttttgttat ccctaattgg atttgaaatc aaaattaggg 961 ttgataaagg catattgtat aatgttgaaa ttcttgttaa atatattgat aaatacaatt 1021 atttcaaagt aaaaattaaa tgctgttgat tacatcttga aatgtaaaaa taattgcatg 1081 cataagctt // LOCUS APHYEPPC 400 bp ds-DNA SYN 07-AUG-1990 DEFINITION Foot-and-mouth disease virus/SP6 promoter recombinanant DNA. ACCESSION M35873 KEYWORDS . SOURCE Foot-and-mouth disease virus (strain O1K), cDNA to viral RNA, clone pFMDV-YEP-polyC. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 400) AUTHORS Zibert,A., Maass,G., Strebel,K., Falk,M.M. and Beck,E. TITLE Infectious foot-and-mouth disease virus derived from a cloned full- length cDNA JOURNAL J. Virol. 64, 2467-2473 (1990) STANDARD simple staff_entry FEATURES from to/span description RNA 18 396 RNA signal 1 17 SP6 promoter recomb 29 30 plasmid DNA end/foot-and-mouth disease DNA start BASE COUNT 68 a 122 c 112 g 98 t ORIGIN 1 atttaggtga cactatagaa tacaagctct tgaaaggggg cattagggtc tcacccctag 61 taagccaacg acagtccctg cgttgcactc cacacttacg ttgtacacac gcgggacccg 121 atgggctatc gttcacccac ctacagctgg actcacggcg ccgcgtggcc atttagctgg 181 attgtgcgga cgaacacgct tgcgcacctc gcgtgaccgg ttagtactct taccactctc 241 cgcctacttg gtcgttagcg ctgtcttggg cattcctgtg ggggccgttc gacgctccac 301 gggaactctc ctgtgtgaca tctacggtga tggggccgtt tcgcgtgggc tggtcgtttg 361 gactgcttcg gctgtcaccc ggcgcccgcc tttcagctag // LOCUS CYNAAAGFP 282 bp ss-mRNA SYN 07-AUG-1990 DEFINITION C.tetragonoloba alpha-amylase/alpha-galactosidase fusion protein gene, 5' end. ACCESSION M35837 KEYWORDS alpha-amylase; alpha-galactosidase; fusion protein. SOURCE C.tetragonoloba and plasmid DNA, clone pUR2601. ORGANISM Artificial gene Artificial sequences; Genes. REFERENCE 1 (bases 1 to 282) AUTHORS Overbeeke,N., Termorshuizen,G.H.M., Giuseppin,M.L.F., Underwood,D.R. and Verrips,C.T. TITLE Secretion of the alpha-galactosidase from Cyamopsis tetragonoloba (Guar) by Bacillus subtilis JOURNAL Appl. Environ. Microbiol. 56, 1429-1434 (1990) STANDARD simple staff_entry FEATURES from to/span description pept 88 > 282 alpha-amylase/alpha-galactosidase fusion protein binding 77 80 ribosomal binding site (put.) recomb 180 181 alpha-amylase end/alpha-galactosidase start BASE COUNT 88 a 56 c 70 g 68 t ORIGIN 1 gctgcaggta accggatccg aattcccggg gatccgtcct gatatgtaaa atataatttg 61 tataagaaaa tgagagggag aggaaacatg attcaaaaac gaaagcggac agtttcgttc 121 agacttgtgc ttatgtgcac gctgttattt gtcagtttgc cgattacaaa aacatcagcc 181 gcggaaaacg gtttgggtca aaccccacca atgggttgga actcctggaa ccacttcggt 241 tgtgacatta acgaaaacgt tgtcagagaa acagctgatg ca // LOCUS HSODR3E 111 bp ds-DNA VRL 07-AUG-1990 DEFINITION Herpesvirus papio 3' dyad region DNA. ACCESSION M35835 KEYWORDS dyad region. SOURCE Herpesvirus papio DNA, from baboon B-cell. ORGANISM Herpesvirus papio Viridae; ds-DNA enveloped viruses; Herpesviridae; Gammaherpesviridae. REFERENCE 1 (bases 1 to 111) AUTHORS Loeb,D.D., Sung,N.S., Pesano,R.L., Sexton,C.J., Hutchison,C.H.III. and Pagano,J.S. TITLE Plasmid origin of replication of herpesvirus papio: DNA sequence and enhancer function JOURNAL J. Virol. 64, 2876-2883 (1990) STANDARD simple staff_entry BASE COUNT 29 a 30 c 28 g 24 t ORIGIN 1 ggacagcaca tactgcctcg cagatagcat ataccgccgg catgatagca tatgctaccc 61 agatggatag catacgctac ctcccgggta gtatttgcta tccgggtaag g // LOCUS HUMMHDQB3A 552 bp ss-mRNA PRI 07-AUG-1990 DEFINITION Human MHC class II DQ3.1ER (DR4) mRNA, partial cds. ACCESSION M35730 KEYWORDS cell surface glycoprotein; class II gene; integral membrane protein; major histocompatibility complex. SOURCE Human homozygous cell line ER, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 552) AUTHORS Holbeck,S.L. and Nepom,G.T. TITLE Molecular analysis of DQ-beta-3.1 genes JOURNAL Hum. Immunol. 21, 183-192 (1988) STANDARD simple staff_entry FEATURES from to/span description pept < 1 > 552 MHC class II DQ3.1ER protein (AA at 3) /hgml_locus_uid="LS0098W" /nomgen="HLA-DQB1" /map="6p21.3" site 269 270 MHC class II DQ3-beta-1 exon end/MHC class II DQ3-beta-2 exon start BASE COUNT 128 a 165 c 162 g 97 t ORIGIN Chromosome 6p21.3. 1 aggatttcgt gtaccagttt aaggccatgt gctacttcac caacgggacg gagcgcgtgc 61 gttatgtgac cagatacatc tataaccgag aggagtacgc acgcttcgac agcgacgtgg 121 aggtgtaccg ggcggtgacg ccgctggggc cgcctgacgc cgagtactgg aacagccaga 181 aggaagtcct ggagaggacc cgggcggagt tggacacggt gtgcagacac aactaccagt 241 tggagctccg cacgaccttg cagcggcgag tggagcccac agtgaccatc tccccatcca 301 ggacagaggc cctcaaccac cacaacctgc tggtctgctc agtgacagat ttctatccag 361 cccagatcaa agtccggtgg tttcggaatg accaggagga gacaaccggc gttgtgtcca 421 ccccccttat taggaacggt gactggacct tccagatcct ggtgatgctg gaaatgactc 481 cccagcatgg agacgtctac acctgccacg tggagcaccc cagcctccag aaccccatca 541 ccgtggagtg gc // LOCUS HUMMHDQB3B 530 bp ss-mRNA PRI 07-AUG-1990 DEFINITION Human MHC class II DQ3.1LUY (DR8) mRNA, partial cds. ACCESSION M35731 KEYWORDS cell surface glycoprotein; class II gene; integral membrane protein; major histocompatibility complex. SOURCE Human homozygous cell line LUY, cDNA to mRNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 530) AUTHORS Holbeck,S.L. and Nepom,G.T. TITLE Molecular analysis of DQ-beta-3.1 genes JOURNAL Hum. Immunol. 21, 183-192 (1988) STANDARD simple staff_entry FEATURES from to/span description pept.ps < 1 > 530 MHC class II DQ3.1LUY protein (AA at 3) /hgml_locus_uid="LS0098W" /nomgen="HLA-DQB1" /map="6p21.3" site 248 249 MHC class II DQ3-beta-1 exon end/MHC class II DQ3-beta-2 exon start BASE COUNT 124 a 157 c 154 g 95 t ORIGIN Chromosome 6p21.3. 1 aggatttcgt gtaccagttt aaggccatgt gctacttcac caacgggacg gagcgcgtgc 61 gttatgtgac cagatacatc tataaccgag aggagtacgc acgcttcgac agcgacgtgg 121 aggtgtaccg ggcggtgacg ccgctggggc cgcctgacgc cgagtactgg aacagccaga 181 aggaagtcct ggagaggacc cgggcggagt tggacacggt gtgcagacac aactaccagt 241 tggagctctg gagcccacag tgaccatctc cccatccagg acagaggccc tcaaccacca 301 caacctgctg gtctgctcag tgacagattt ctatccagcc cagatcaaag tccggtggtt 361 tcggaatgac caggaggaga caaccggcgt tgtgtccacc ccccttatta ggaacggtga 421 ctggaccttc cagatcctgg tgatgctgga aatgactccc cagcatggag acgtctacac 481 ctgccacgtg gagcacccca gcctccagaa ccccatcacc gtggagtggc // LOCUS LGILG106NL 378 bp ss-mRNA PLN 07-AUG-1990 DEFINITION L.gibba negatively light-regulated protein (Lg106) mRNA, 3' end. ACCESSION M35866 KEYWORDS negatively light-regulated protein. SOURCE L.gibba (L. G-3), cDNA to mRNA, clone pLg106. ORGANISM Lemna gibba Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Arecidae; Arales; Lemnaceae. REFERENCE 1 (bases 1 to 378) AUTHORS Okubara,P.A., Flores,S. and Tobin,E.M. TITLE Characterization of a negatively light-regulated mRNA from Lemna gibba JOURNAL Plant Mol. Biol. 11, 673-681 (1988) STANDARD simple staff_entry FEATURES from to/span description pept < 1 261 ORF1 (AA at 1) pept < 1 82 ORF2 (AA at 2) pept < 1 62 ORF3 (AA at 3) BASE COUNT 96 a 96 c 102 g 84 t ORIGIN 1 gacggcggat tattacccaa aaagcctcct ctcatttcca aggaccacga gcgagccttt 61 gactccgctg actgggcatt aggaaagcaa ggaggccccg tggagaagcc gaagcctctg 121 gaggcgctac ggccgaaact ccagccaact cagcagcaag ttcgcttgag atcggtttat 181 gctcctgccg agggcgaaga ttggatccag cggcgcgaca gaagagatgg gcaacgagtg 241 agtcgcctcg gaggaatgta gtatccatcc tatatctctc tctccgattc ctgaataaaa 301 cgatctattt tgtggcatct cctgaagaac cctaattgat tagtagttga ggtttgacct 361 tgggtcaacg gatcagat // LOCUS MUSIGHADM 360 bp ss-mRNA ROD 07-AUG-1990 DEFINITION Mouse Ig heavy chain mRNA V-region, partial cds. ACCESSION M26808 KEYWORDS immunoglobulin heavy-chain; processed gene; variable region. SOURCE Mouse (strain C57BL/6) hybridoma line B1-8.V4, cDNA to mRNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 360) AUTHORS Brueggemann,M., Mueller,H.-J., Burger,C. and Rajewsky,K. TITLE Idiotypic selection of an antibody mutant with changed hapten binding specificity, resulting from a point mutation in position 50 of the heavy chain JOURNAL EMBO J. 5, 1561-1566 (1986) STANDARD simple staff_entry FEATURES from to/span description pept < 1 > 360 Ig heavy chain V-region (AA at 1) BASE COUNT 89 a 92 c 99 g 80 t ORIGIN Chromosome 12. 1 caggtccaac tgcagcagcc tggggctgag cttgtgaagc ctggggcttc agtgaagctg 61 tcctgcaagg cttctggcta caccttcacc agctactgga tgcactgggt gaagcagagg 121 cctggacgag gccttgagtg gattggaggg attgatccta atagtggtgg tactaagtac 181 aatgagaagt tcaagagcaa ggccacactg actgtagaca aaccctccag cacagcctac 241 atgcagctca gcagcctgac atctgaggac tctgcggtct attattgtgc aagatacgat 301 tactacggta gtagctactt tgactactgg ggccaaggca ccactctcac agtctcctca // LOCUS PLYJCRR 270 bp ds-DNA VRL 07-AUG-1990 DEFINITION Polyomavirus JC regulatory region DNA. ACCESSION M35834 KEYWORDS regulatory region. SOURCE Polyomavirus JC DNA, from human progressive multifocal leukoencephalopathy patient CY urine. ORGANISM Polyomavirus JC Viridae; ds-DNA nonenveloped viruses; Papovaviridae; Polyomaviruses. REFERENCE 1 (bases 1 to 270) AUTHORS Yogo,Y., Kitamura,T., Sugimoto,C., Ueki,T., Aso,Y., Hara,K. and Taguchi,F. TITLE Isolation of a possible archetypal JC virus DNA sequence from nonimmunocompromised individuals JOURNAL J. Virol. 64, 3139-3143 (1990) STANDARD simple staff_entry FEATURES from to/span description pept 268 > 270 late leader protein orgrpl 12 < 1 (c) origin of DNA replication signal 15 29 TATA box BASE COUNT 78 a 66 c 77 g 49 t ORIGIN 1 gcctcggcct cctgtatata taaaaaaaag ggaaggtagg gaggagctgg ctaaaactgg 61 atggctgcca gccaagcatg agctcatacc tagggagcca accagctgac agccagaggg 121 agccctggct gcatgccact ggcagttata gtgaaacccc tcccatagtc cttaatcaca 181 agtaaacaaa gcacaagggg aagtggaaag cagccagggg aacatgtttt gcgagccaga 241 gctgttttgg cttgtcacca gctggccatg // LOCUS PSEIAAMH 3677 bp ds-DNA BCT 07-AUG-1990 DEFINITION P.syringae tryptophan 2-monooxygenase (iaaM) and indoleacetamide hydrolase (iaaH) genes, complete cds. ACCESSION M11035 M35690 KEYWORDS iaaH gene; iaaM gene; indoleacetamide hydrolase; indoleacetic acid; indoleacetic acid operon promoter region; tryptophan 2-monooxygenase; tryptophan-2-oxyreductase. SOURCE P.syringae savastanoi (strain EW2009) DNA, clones pLUC2, pCP3, and pCJP12. ORGANISM Pseudomonas syringae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Pseudomonadaceae. REFERENCE 1 (bases 202 to 3677) AUTHORS Yamada,T., Palm,C.J., Brooks,B. and Kosuge,T. TITLE Nucleotide sequences of the Pseudomonas savastanoi indoleacetic acid genes show homology with agrobacterium tumefaciens T-DNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 6522-6526 (1985) STANDARD simple staff_review REFERENCE 2 (bases 1 to 312) AUTHORS Gaffney,T.D., da Costa e Silva,O., Yamada,T. and Kosuge,T. TITLE The indoleacetic acid operon of Pseudomonas syringae subsp. savastanoi: Transcription analysis and promoter identification JOURNAL J. Bacteriol. (1990) In press STANDARD simple staff_entry COMMENT The iaaH and iaaM genes are part of an operon that is borne on a plasmid, pIAA, in oleander strains of the pathogen. There appears to be no genetic transformation of host tissue by P.savastanoi. No Pribnow boxes were found, though potential ribosome binding sites are located at positions 435-439 and 2164-2168. Expression of iaaH depends upon the promoter for iaaM. Draft entry and computer-readable sequence for [1] kindly submitted by T.Yamada, 14-JAN-1986. Draft entry and computer-readable sequence for [2] kindly submitted by T.D.Gaffney, 28-JUN-1990. FEATURES from to/span description pept 454 2127 tryptophan 2-monooxygenase (EC 1.13.12.3) pept 2170 3537 indoleacetamide hydrolase pept 82 312 promoter proximal ORF mRNA 54 > 3537 indoleacetic acid mRNA site 19 47 indoleacetic acid operon promoter binding 577 651 FAD binding site BASE COUNT 813 a 917 c 1046 g 901 t ORIGIN 1 bp upstream of EcoRI site. 1 ccacaaaccg gcaagacgtt gaaaatcaat ttcaagcatt gtatgttttt ggtgggacgc 61 cacttggaaa atctggtgct gatgcccgga cggactcctg cgaactggct ggacaaggcg 121 atggtggcag tggcccgaat cagacagcgc aagccccagg cggcagtacc cgcggcgctc 181 ctccaagccc cgcacgctat ggaattcgtt tggagcacca ccaaaacctt taccgaatgc 241 cattgtccgg cttacacccc ctatacgcaa gccagtgcgt ggtcggccag cgcggtcgtt 301 agtgcttatt aattttagag gactagcatg gtttgaagga atggttcagg tgttttggat 361 tttggcggct gccgttaaaa ggtgctgttt cagtttcatt taaagaatcg taatccgggt 421 agcacgtaag gtcgaagagg gtagagtcgc gttatgtatg accattttaa ttcacccagt 481 attgatattt tgtacgacta cggtcccttt ctgaaaaaat gtgaaatgac gggaggcata 541 ggcagctatt cagccggaac gcccacccct cgggtagcga tagtcggtgc cggcatcagt 601 gggctggtcg ctgcaactga actattacgt gcgggagtca aggacgttgt cttatatgaa 661 tcgcgtgatc gaatcggggg acgggtatgg tctcaagttt tcgatcagac tcgtccacgt 721 tacattgcag aaatgggtgc gatgcgcttt cctcccagtg caactggcct tttccactac 781 ctgaaaaagt ttggtatttc gacgtcgacc acctttccgg atcctggtgt ggtggacacg 841 gagctgcatt accgtggcaa gcgctatcac tggccagcgg gcaaaaagcc gcccgaatta 901 ttcaggcgag tctatgaggg gtggcagtct ctattgtccg aaggttacct ccttgaaggc 961 ggttctttag ttgccccgct ggacattacc gcaatgctga agtcgggtcg tctggaagag 1021 gcagcgatcg catggcaggg atggctcaat gtattccggg attgttcatt ctataacgcg 1081 attgtctgta tttttactgg ccgccatccg ccaggcggcg acagatgggc tcgtcctgaa 1141 gactttgagc tgtttggctc gcttggcata ggctcgggcg ggtttttgcc agtctttcag 1201 gctggcttta cggaaatact gcggatggtt atcaacggat accaaagtga ccagcgactg 1261 attccggacg ggatatccag tctggccgcg agactcgctg atcagtcgtt tgacggcaaa 1321 gcgttaaggg accgcgtttg ttttagccgg gtaggtcgca tttccagaga agctgaaaaa 1381 atcatcatcc agacggaagc aggagaacag cgtgtatttg atcgagtaat tgtcactagc 1441 agtaatcggg ccatgcaaat gattcactgc ctcacggata gcgagagctt tctgagtcgt 1501 gatgtcgctc gtgctgtccg cgaaacccat ctgacaggtt catcgaagct tttcattctc 1561 acccgaacca aattctggat aaaaaacaag cttcccacca ccatccagtc ggacggtctg 1621 gtgcgcggcg tctattgtct ggattatcag cccgatgaac ctgaggggca tggcgttgtt 1681 ctgctcagtt acacgtggga agacgacgct caaaaaatgc tggcgatgcc tgacaagaaa 1741 acgcgttgcc aggtactggt tgatgacctt gctgcgatac acccgacgtt cgccagttat 1801 ctcctgcccg ttgatgggga ttatgagcgg tatgtattgc accatgactg gctcaccgat 1861 ccccattctg cgggcgcttt caaactcaat tatcccggcg aggacgttta ctcgcagcga 1921 ttgttttttc aaccaatgac agcgaacagt cccaataaag acacggggct ctatctggct 1981 ggctgcagtt gctcttttgc cggagggtgg atcgaaggtg ctgtccagac agcattgaac 2041 agtgcttgcg cggtgctgcg cagcaccgga gggcaactgt caaaaggcaa cccgctggac 2101 tgtatcaacg cctcctatcg ctattaacag tcctgagagc agcgctaagc taatacgggt 2161 gaaaagagca tgcatgaaat aatcacactt gaatcgctgt gccaggcatt ggctgatggc 2221 gagattgccg ctgcggagct gcgcgagcgt gcgctcgata ctgaggcccg cttggcccgt 2281 ttgaactgtt tcatacgtga gggtgatgcg gtcagccagt ttggcgaggc tgatcatgca 2341 atgaagggta ctccactctg gggaatgccg gtttccttca aggataatat ctgtgttcgc 2401 ggtttgccgt tgacagccgg gacgcgagga atgtccggtt tcgtatctga tcaggatgct 2461 gcgattgtca gtcaactcag agccctcggg gctgtggtcg ctggcaagaa caacatgcac 2521 gaactcagtt tcggagtgac ctccatcaat cctcattggg gaaccgtggg aaaccccgtg 2581 gcccccggtt attgtgccgg aggtagtagt ggtggaagtg ccgccgcagt ggcaagtgga 2641 attgttccgc tgtcggtggg gaccgacacg gggggctcga taagaatacc ggcggccttc 2701 tgcggcatta cgggcttcag acccactact ggacgctggt caacggcagg cattatccct 2761 gtttctcata caaaggattg cgttgggttg ctgacacgaa cggcaggcga cgccggattt 2821 ttgtacggac tgttgtcagg caagcagcag tcttttcccc tgagcaggac ggccccctgt 2881 cgaatcggcc taccggtctc catgtggtcc gatctggatg gcgaggtgga gagggcatgc 2941 gtgaatgcac tcagcctgct gcgcaagaca gggttcgagt ttattgaaat tgatgatgcc 3001 gatattgtcg aactgaacca gacactcacg ttcaccgttc cgctttacga attctttgcc 3061 gaccttgctc agtcattgct ctccttgggc tggaagcacg gtatccatca tatttttgca 3121 caggttgatg atgccaacgt gaaaggcatc atcaatcacc accttgggga gggcgctata 3181 aaaccggctc actatttgag ttcactgcaa aatggcgagc tgttgaaaag aaaaatggat 3241 gagctatttg ctcgtcataa tatcgagctc ctggggtacc ccacggtacc ttgccgggta 3301 cctcatctgg atcatgctga ccgaccagag tttttcagtc aggcaattcg caataccgac 3361 ctggccagca atgcgatgct cccctccatt actattcctg tcgggccaga agggcgattg 3421 ccggtcggct tgagctttga tgctctaaga gggcgagacg cacttttgct gagcagagtc 3481 agtgccatag agcaggtatt aggttttgta cgaaaagtat tgccgcatac aacgtaggct 3541 acaggccagc gtgaccatgg ctgcgtagct cttggccagc ttgtcgtagc gggtgccgat 3601 tcggcggttc tcttttagcc agccaaacat ccgctcaatg atgttgcgct gccgatactt 3661 tggacgatcg aagagtc // LOCUS SVCG3E 68 bp ss-RNA VRL 07-AUG-1990 DEFINITION Spring viremia of carp virus genome, 3' end. ACCESSION M35836 KEYWORDS . SOURCE Spring viremia of carp virus RNA. ORGANISM Spring viremia of carp virus Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses; Rhabdoviridae. REFERENCE 1 (bases 1 to 68) AUTHORS Roy,P., Gupta,K.C. and Kiuchi,A. TITLE Characterization of Spring viremia of carp virus mRNA species and the 3' sequence of the viral RNA JOURNAL Virus Res. 1, 189-202 (1984) STANDARD simple staff_entry BASE COUNT 20 a 13 c 10 g 25 t ORIGIN 1 tgcttctgtt tatttggtaa ctattgtcaa tgtaccaaat aaacagacca ttgtctgtag 61 tactcaca // LOCUS TTHSUCDA 880 bp ds-DNA BCT 07-AUG-1990 DEFINITION T.aquaticus B succinyl-CoA synthetase alpha-subunit (sucD) gene, complete cds. ACCESSION M35832 X12815 KEYWORDS sucD gene; succinyl-CoA synthetase alpha-subunit. SOURCE T.aquaticus (strain B (NCIB 11247)) DNA. ORGANISM Thermus aquaticus Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 880) AUTHORS Nicholls,D.J., Sundaram,T.K., Atkinson,T. and Minton,N.P. TITLE Nucleotide sequence of the succinyl-CoA synthetase alpha-subunit from Thermus aquaticus B JOURNAL Nucleic Acids Res. 16, 9858-9858 (1988) STANDARD full staff_entry COMMENT Gene product mature structure is (alpha beta)2. Submitted (09-SEP-1988) on tape to the EMBL data library. FEATURES from to/span description pept 14 880 succinyl-CoA synthetase alpha-subunit (sucD; EC 6.2.1.5) binding 2 7 sucD ribosomal binding site (put.) BASE COUNT 153 a 304 c 310 g 113 t ORIGIN 1 tgggaggtgc ggcgtgatcc tggtgaaccg cgagacccgc gtcctggtcc agggcatcac 61 cggccgggag gggcagttcc acaccaagca gatgctggac tacggcacca agatcgtcgc 121 cggggtcacc ccgggcaaag ggggaacgga ggtcctaggg gtccccgtct acgacacggt 181 gaaggaggcg gtggcccacc acgaggtgga cgcctccatc atcttcgtgc ccgccccggc 241 cgcggcggac gccgccctgg aagcggccca cgccgggatc cccctcatcg tcctcatcac 301 cgagggcatc cccaccctgg acatggtgcg ggcggtggag gagatcaagg ccctgggaag 361 ccgcctcatc ggggggaact gccccgggat catcagcgcc cacctaccca agatcgggat 421 catgcccggc cacgtcttca agcggggccg ggtggggatc atcagccgct ccggcaccct 481 tcggcacgag gccgcagccg ccctttccca ggcggggctc ggcaccacca ccacggtggg 541 gatcgggggc gaccccgtca ggcggctcac cttcaaggac ctcctccccc tcttcaacga 601 ggacccggag acggaggccg tggtcctcat cggggagatc ggcggctccg acgaggagga 661 ggcggcggct tgggtgaagg accacatgaa gaagccggtg gtgggcttca tcggaggccg 721 ctccgccccc aagggcaagc gcatgggcca cgccggggcc atcatcatgg gcaacgtggg 781 caccccggag tccaagctcc gggccttcgc cgaggcgggc atccccgtgg ccgacaccat 841 cgacgagatc gtggagctgg tcaagaaggc cctgggctaa // LOCUS MUSMHPCRE 256 bp ds-DNA ROD 07-AUG-1990 DEFINITION Mouse MHC class I Q even processed pseudogene, exons 7 and 8. ACCESSION M30902 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex; pseudogene. SOURCE Mouse adult (strain SK/CamE1) liver. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 256) AUTHORS Tine,J.A., Walsh,A., Rathbun,D., Leonard,L., Wakeland,E.K., Dilwith,R. and Flaherty,L. TITLE Genetic polymorphisms of Q region genes from wild derived mice: Implications for Q region evolution JOURNAL Immunogenetics 31, 315-325 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.Flaherty 04-JAN-1990. FEATURES from to/span description pept.ps / 45 82 pseudo-MHC Q even, exon 7 (AA at 46) 191 219 pseudo-MHC Q even, exon 8 IVS < 1 44 pseudo-MHC Q even intron A (no splice consensus) IVS 83 190 pseudo-MHC Q even intron B (no splice consensus) BASE COUNT 52 a 52 c 70 g 82 t ORIGIN Chromosome 17. 1 agatatatct ttgtatatat ttttccctag gcagggacag ctcccagagc tctgatatgt 61 ttctctcaag attgtaaagg tgacattcta tggcctgatt gcagaggggc actgtggaca 121 tggttgtgtt tcagggactc ccacaatccc ctgtgagtgg tgggttgttg ggatattgtc 181 ttcattgtgg tggttcctga ccctcgttct ctattatgaa gacagctgcc tggagtggac 241 tcagtgacag ccagtg // LOCUS MUSMHPCRM 264 bp ds-DNA ROD 07-AUG-1990 DEFINITION Mouse MHC class I Q odd processed pseudogene, exons 7 and 8. ACCESSION M30901 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex; pseudogene. SOURCE Mouse adult (strain Metkovic 2) liver. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 264) AUTHORS Tine,J.A., Walsh,A., Rathbun,D., Leonard,L., Wakeland,E.K., Dilwith,R. and Flaherty,L. TITLE Genetic polymorphisms of Q region genes from wild derived mice: Implications for Q region evolution JOURNAL Immunogenetics 31, 315-325 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.Flaherty 04-JAN-1990. FEATURES from to/span description pept.ps / 45 81 pseudo-MHC Q odd, exon 7 (AA at 45) 194 225 pseudo-MHC Q odd, exon 8 IVS < 1 44 pseudo-MHC Q odd intron A (no splice consensus) IVS 82 193 pseudo-MHC Q odd intron B BASE COUNT 59 a 53 c 76 g 76 t ORIGIN Chromosome 17. 1 tatgtacata tgcatataca ttttttaccc ttggcaggga cagctcctag agctctgata 61 gatctctccc agatggtaaa ggtgacactc tggggcctga ttggagaggg gcaatgtgga 121 tatgattggg tttcagggac tccacgaatc ccctctgagt gagtggtggg ttgttggaat 181 gttgtcttca cagtgatggg tcatgtctct cattctctag catgaagaca gctgcctgga 241 ctgcactgag tgacagacga tgtg // LOCUS MUSMHQ4D 261 bp ds-DNA ROD 07-AUG-1990 DEFINITION Mouse MHC class I Q4d Qb-1 processed pseudogene (d haplotype), exons 7 and 8. ACCESSION M30896 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex; pseudogene. SOURCE Mouse adult (strain Balb/c, haplotype d) sperm, clone 65.1. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 261) AUTHORS Tine,J.A., Walsh,A., Rathbun,D., Leonard,L., Wakeland,E.K., Dilwith,R. and Flaherty,L. TITLE Genetic polymorphisms of Q region genes from wild derived mice: Implications for Q region evolution JOURNAL Immunogenetics 31, 315-325 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.Flaherty 04-JAN-1990. FEATURES from to/span description pept.ps / 45 82 peudo-MHC Q4d Qb-1, exon 7 (AA at 46) 191 222 peudo-MHC Q4d Qb-1, exon 8 IVS < 1 44 peudo-MHC Q4d Qb-1 intron A (no splice consensus) IVS 83 190 peudo-MHC Q4d Qb-1 intron B (no splice consensus) BASE COUNT 54 a 52 c 70 g 85 t ORIGIN Chromosome 17. 1 tatagatata tctttgtata tatttttccc taggcaggga cagctcccag agctctgata 61 tgtttctctc aagattgtaa aggtgacatt ctatggcctg attgcagagg ggcactgtgg 121 acatggttgt gtttcaggga ctcccacaat cccctgtgag tggtgggttg ttgggatatt 181 gtcttcattg tggtggttcc tgaccctcat tctctatcat gaagacagct gcctggagtg 241 gacttagtga cagccagtgt g // LOCUS MUSMHQ5B 264 bp ds-DNA ROD 07-AUG-1990 DEFINITION Mouse MHC class I Q5B processed pseudogene (b haplotype), exons 7 and 8. ACCESSION M30897 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex; pseudogene. SOURCE Mouse adult (strain B10, haplotype b) liver, clone B2.5. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 264) AUTHORS Tine,J.A., Walsh,A., Rathbun,D., Leonard,L., Wakeland,E.K., Dilwith,R. and Flaherty,L. TITLE Genetic polymorphisms of Q region genes from wild derived mice: Implications for Q region evolution JOURNAL Immunogenetics 31, 315-325 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.Flaherty 04-JAN-1990. FEATURES from to/span description pept.ps / 45 81 pseudo-MHC Q5b, exon 7 (AA at 45) 194 225 pseudo-MHC Q5b, exon 8 IVS < 1 44 pseudo-MHC Q5b intron A (no splice consensus) IVS 82 193 pseudo-MHC Q5b intron B BASE COUNT 58 a 55 c 77 g 74 t ORIGIN Chromosome 17. 1 tatgtacata tgcatataca ttttttaccc ttggcaggga cagctcctag agctctgata 61 gatctctccc agatggtaaa ggtgacactc tgggacctga ttggggaggg gcaatgcgga 121 tatgattggg tttcagggac tccacgaatc ccctctgagt gagtggtggg ttgttggaat 181 gttgtcttca cagtgatggg tcgtgtccct cattctctag catgaagaca gctgcctgga 241 ctgcactgag tgacagacga tgtg // LOCUS MUSMHQ5D 264 bp ds-DNA ROD 07-AUG-1990 DEFINITION Mouse MHC class I Q5d processed pseudogene (d haplotype), exons 7 and 8. ACCESSION M30898 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex; pseudogene. SOURCE Mouse adult (strain Balb/c, haplotype d) sperm, clone 65.1. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 264) AUTHORS Tine,J.A., Walsh,A., Rathbun,D., Leonard,L., Wakeland,E.K., Dilwith,R. and Flaherty,L. TITLE Genetic polymorphisms of Q region genes from wild derived mice: Implications for Q region evolution JOURNAL Immunogenetics 31, 315-325 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.Flaherty 04-JAN-1990. FEATURES from to/span description pept.ps / 45 81 pseudo-MHC Q5d, exon 7 (AA at 45) 194 225 pseudo-MHC Q5d, exon 8 IVS < 1 44 pseudo-MHC Q5d intron A (no splice consensus) IVS 82 193 pseudo-MHC Q5d intron B BASE COUNT 58 a 53 c 77 g 76 t ORIGIN Chromosome 17. 1 tatgtacata tgcatataca ttttttaccc ttggcaggga cagctcctag agctctgata 61 gatctctccc agatggtaaa ggtgacactc tggggcctga ttggggaggg gcaatgtgga 121 tatgattggg tttcagggac tccacgaatc ccctctgagt gagtggtggg ttgttggaat 181 gttgtcttca cagtgatggg tcatgtctct cattctctag catgaagaca gctgcctgga 241 ctgcactgag tgacagacga tgtg // LOCUS MUSMHQ6B 261 bp ds-DNA ROD 07-AUG-1990 DEFINITION Mouse MHC class I Q6b Qa-2 processed pseudogene (b haplotype), exons 7 and 8. ACCESSION M30899 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex; pseudogene. SOURCE Mouse adult (strain B10, haplotype b) liver, clone B2.17. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 261) AUTHORS Tine,J.A., Walsh,A., Rathbun,D., Leonard,L., Wakeland,E.K., Dilwith,R. and Flaherty,L. TITLE Genetic polymorphisms of Q region genes from wild derived mice: Implications for Q region evolution JOURNAL Immunogenetics 31, 315-325 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.Flaherty 04-JAN-1990. FEATURES from to/span description pept.ps / 45 82 pseud-MHC Q6b Qa-2, exon 7 (AA at 46) 191 222 pseud-MHC Q6b Qa-2, exon 8 IVS < 1 44 pseud-MHC Q6b Qa-2 intron A (no splice consensus) IVS 83 190 pseud-MHC Q6b Qa-2 intron B (no splice consensus) BASE COUNT 53 a 52 c 71 g 85 t ORIGIN Chromosome 17. 1 tatagatata tctttgtata tatttttccc taggcaggga cagctcccag agctctgata 61 tgtttctctc aagattgtaa aggtgacatt ctatggcctg attgcagagg ggcactgtgg 121 acatggttgt gtttcaggga ctcccacaat cccctgtgag tggtgggttg ttgggatatt 181 gtcttcattg tggtggttcc tgaccctcgt tctctatcat gaagacagct gcctggagtg 241 gacttagtga cagccagtgt g // LOCUS MUSMHQ89DA 264 bp ds-DNA ROD 07-AUG-1990 DEFINITION Mouse MHC class I Q8/Q9d Qa-2 processed pseudogene (d haplotype), region surrounding exons 7 and 8. ACCESSION M30900 KEYWORDS cell surface antigen; cell surface glycoprotein; class I gene; integral membrane protein; major histocompatibility complex; pseudogene. SOURCE Mouse adult (strain Balb/c, haplotype d) sperm, clone 46.1. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 264) AUTHORS Tine,J.A., Walsh,A., Rathbun,D., Leonard,L., Wakeland,E.K., Dilwith,R. and Flaherty,L. TITLE Genetic polymorphisms of Q region genes from wild derived mice: Implications for Q region evolution JOURNAL Immunogenetics 31, 315-325 (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.Flaherty 04-JAN-1990. FEATURES from to/span description pept.ps / 45 81 peudo-MHC Q8/Q9d Qa-2, exon 7 (AA at 45) 194 225 peudo-MHC Q8/Q9d Qa-2, exon 8 IVS < 1 44 peudo-MHC Q8/Q9d Qa-2 intron A (no splice consensus) IVS 82 193 pseudo-MHC Q8/Q9d Qa-2 intron B (no splice consensus) BASE COUNT 57 a 54 c 78 g 75 t ORIGIN Chromosome 17. 1 tatgtacata tgcatataca ttttttaccc ttggcaggga cagctcctag agctctgata 61 gatctctccc aggtggtaaa ggtgacactc tgggacctga ttggggaggg gcaatgtgga 121 tatgattggg tttcagggac tccacgaatc ccctctgagt gagtggtggg ttgttggaat 181 gttgtcttca cagtgatggg tcgtgtccct cattctctag catgaagaca gctgcctgga 241 ctgcactgag tgacagacga tgtg // LOCUS PMUNE1 220 bp ds-DNA PHG 07-AUG-1990 DEFINITION Bacteriophage mu genomic left end. ACCESSION M34919 KEYWORDS . SEGMENT 1 of 2 SOURCE Bacteriophage mu DNA. ORGANISM Bacteriophage mu Viridae; ds-DNA nonenveloped viruses; Myoviridae. REFERENCE 1 (bases 1 to 220) AUTHORS Groenen,M.A.M., Timmers,E. and Van De Putte,P. TITLE DNA sequences at the ends of the genome of Bacteriophage mu essential for transposition JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 2087-2091 (1985) STANDARD simple staff_review BASE COUNT 82 a 32 c 44 g 62 t ORIGIN 1 tgtattgatt cacttgaagt acgaaaaaaa ccgggaggac attggattat tcgggatctg 61 atgggattag atttggtggg gcttgcaagc ctgtagtgca aattttagtc cttaatcaat 121 gaaacgcgaa agatagtaaa aaattgcttt tgtttcattg aaaatacgaa aaacaaaaac 181 actgcaaatc atttcaataa cagcttcaaa aaacgttcaa // LOCUS PMUNE2 220 bp ds-DNA PHG 07-AUG-1990 DEFINITION Bacteriophage mu genomic right end. ACCESSION M34920 KEYWORDS . SEGMENT 2 of 2 SOURCE Bacteriophage mu DNA. ORGANISM Bacteriophage mu Viridae; ds-DNA nonenveloped viruses; Myoviridae. REFERENCE 1 (bases 1 to 220) AUTHORS Groenen,M.A.M., Timmers,E. and Van De Putte,P. TITLE DNA sequences at the ends of the genome of Bacteriophage mu essential for transposition JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 2087-2091 (1985) STANDARD simple staff_review BASE COUNT 71 a 47 c 41 g 61 t ORIGIN 1 gtggtacaca aatttaatca gtatcgctac atcagattcc tgaacaaacg agcaaggaag 61 cggctaaata ccaaactatt caaggttcag gcatacccta agtgatcccc atgtaatgaa 121 taaaaagcag taattaatac atctgtttca tttgaagcgc gaaagctaaa gttttcgcat 181 ttatcgtgaa acgctttcgc gtttttcgtg cgccgcttca // LOCUS STYRGGA 103 bp ds-DNA BCT 07-AUG-1990 DEFINITION S.typhimurium 23S rRNA gene. ACCESSION M35803 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE S.typhimurium (strain ATCC 13311) DNA. ORGANISM Salmonella typhimurium Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 103) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 > 103 23S ribosomal RNA BASE COUNT 23 a 22 c 38 g 20 t ORIGIN 1 ggaagatgta acggggctaa accatgcacc gaagctgcgg cagcgacgct gatgcgttgt 61 tgggtagggg agcgttctgt aagcctgcga aggtcacctg tga // LOCUS STYRGGB 104 bp ds-DNA BCT 07-AUG-1990 DEFINITION S.typhimurium 23S rRNA gene. ACCESSION M35804 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE S.typhimurium (strain LB5010) DNA. ORGANISM Salmonella typhimurium Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 104) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 > 104 23S ribosomal RNA BASE COUNT 25 a 22 c 34 g 23 t ORIGIN 1 cctgcgcgga agatgtaacg gggctcaaac catacaccga agctacgggt tcatcctttg 61 gatgagcggt agaggagcgt tctgtaagcc tgtgaaggtg agtt // LOCUS STYRGGC 185 bp ds-DNA BCT 07-AUG-1990 DEFINITION S.typhimurium 23S rRNA gene. ACCESSION M35819 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE S.typhimurium (strain ATCC 13311) DNA. ORGANISM Salmonella typhimurium Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 185) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 38 23S ribosomal RNA 145 > 185 23S ribosomal RNA site 39 144 23S rRNA intervening sequence BASE COUNT 49 a 36 c 60 g 40 t ORIGIN 1 aagatgtaac ggggctaaac catgcaccga agctgcggca gcgaacgtat cacccaagac 61 aactttacgg agttgacgat tgacggagcg aagcgacgtc aaagcgttca ttaaagtcga 121 gttggcttag ggatacgttc gttgggtagg ggagcgttct gtaagcctgt gaaggtgtgt 181 cgtga // LOCUS YEPRGGA 85 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.pestis 23S rRNA gene. ACCESSION M35798 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.pestis (strain EV76) DNA. ORGANISM Yersinia pestis Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 85) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 > 85 23S ribosomal RNA BASE COUNT 15 a 16 c 34 g 20 t ORIGIN 1 atgcaccgaa gctgcggcag cgacgcttag gcgttgttgg gtaggggagc gttctgtaag 61 ccgttgaagg tgacctgtga gggtt // LOCUS YEPRGGB 120 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.pseudotuberculosis 23S rRNA gene. ACCESSION M35799 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.pseudotuberculosis (strain YPIII/pIB1; serotype III) DNA. ORGANISM Yersinia pseudotuberculosis Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 120) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 > 120 23S ribosomal RNA BASE COUNT 23 a 24 c 47 g 26 t ORIGIN 1 gtcggcctgc gcggaagatg taacggggct aaaccatgca ccgaagctgc ggcagcgacg 61 cttaggtgtt gttgggtagg ggagcgttct gtaagccgtt gaaggtgacc tgtgagggtt // LOCUS YEPRGGC 83 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35800 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 761/80; serotype 0:6,310) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 83) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 > 83 23S ribosomal RNA BASE COUNT 14 a 16 c 34 g 19 t ORIGIN 1 gcaccgaagc tgcggcagcg acgcttaggc gttgttgggt aggggagcgt tctgtaagcc 61 gttgaaggtg acctgtgagg gtt // LOCUS YEPRGGD 114 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35801 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 8081; serotype 0:8) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 114) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 > 114 23S ribosomal RNA BASE COUNT 23 a 24 c 43 g 24 t ORIGIN 1 gtcggcctgc gcggaagatg taacggggct aaaccatgca ccgaagctgc ggcagcgaca 61 cttaggtgtt gttgggtagg ggagcgttct gtaagccgtt gaaggtgacc tgtg // LOCUS YEPRGGE 104 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.bercovieri 23S rRNA gene. ACCESSION M35802 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.bercovieri (strain 3016/84; serotype 0:58,16) DNA. ORGANISM Yersinia bercovieri Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 104) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 > 104 23S ribosomal RNA BASE COUNT 21 a 21 c 38 g 24 t ORIGIN 1 cgcggaagat gtaacggggc taaaccatgc accgaagctg cggcagcttc gcttaggtgt 61 tgttgggtag gggagcgttc tgtaagccgt tgaaggtgac ctgt // LOCUS YEPRGGF 197 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35805 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 132; serotype 0:1) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 197) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 37 23S ribosomal RNA 159 > 197 23S ribosomal RNA site 38 158 23S rRNA intervening sequence BASE COUNT 52 a 43 c 60 g 42 t ORIGIN 1 agatgtaacg gggctaaacc atgcaccgaa gctgcggcag cgaacgtatc acttaaaacg 61 cttaacgtga cgcaaagccg gcatgttcaa gccacactaa acgttgagtt ggccggtgtg 121 ctgacaaacg aacaggcgtt ttaaggatac gttcgttggg taggggagcg ttctgtaagc 181 cgttgaaggt ggcctgt // LOCUS YEPRGGG 179 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35806 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 1142; serotype 0:2) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 179) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 19 23S ribosomal RNA 141 > 179 23S ribosomal RNA site 20 140 23S rRNA intervening sequence BASE COUNT 47 a 40 c 52 g 40 t ORIGIN 1 ccatgcaccg aagctgcggc agcgaacgta tcacttaaaa cgcttaacgt gacgcaaagc 61 cggcatgttc aagccacact aaacgttgag ttggccgatg tgctgacaaa cgaacaggcg 121 ttttaaggat acgttcgttg ggtaggggag cgttctgtaa gccgttgaag gtagtctgt // LOCUS YEPRGGH 206 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35807 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 6471/76; serotype 0:3) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 206) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 38 23S ribosomal RNA 160 > 206 23S ribosomal RNA site 39 159 23S rRNA intervening sequence BASE COUNT 54 a 43 c 65 g 44 t ORIGIN 1 aagatgtaac ggggctaaac catgcaccga agctgcggca gcgaacgtat cacttaaaac 61 gcttaacgtg acgcaaagcc ggcatgttca agccacacta aacgttgagt tggccggtgt 121 gctgacaaac gaacaggcgt tttaaggata cgttcgttgg gtaggggagc gttctgtaag 181 ccgttgaagg tggtctgtga gggctg // LOCUS YEPRGGI 175 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35808 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 7500; serotype 0:5,27) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 175) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 10 23S ribosomal RNA 132 > 175 23S ribosomal RNA site 11 131 23S rRNA intervening sequence BASE COUNT 46 a 36 c 55 g 38 t ORIGIN 1 gaagctgcgg cagcgaacgt atcacttaaa acgcttaacg tgacgcaaag ccggcatgtt 61 caagccacac taaacgttga gttggccgat gtgctgacaa acgaacaggc gttttaagga 121 tacgttcgtt gggtagggga gcgttctgta agccgttgaa ggtgacctgt gaggg // LOCUS YEPRGGJ 190 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35809 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain Ruokola/71; serotype 0:9) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 190) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 30 23S ribosomal RNA 152 > 190 23S ribosomal RNA site 31 151 23S rRNA intervening sequence BASE COUNT 49 a 43 c 58 g 40 t ORIGIN 1 acggggctaa accatgcacc gaagctgcgg cagcgaacgt atcacttaaa acgcttaacg 61 tgacgcaaag ccggcatgtt caagccacac taaacgttga gttggccggt gtgctgacaa 121 acgaacaggc gttttaagga tacgttcgtt gggtagggga gcgttctgta agccgttgaa 181 ggtggcctgt // LOCUS YEPRGGK 192 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35810 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain C36; serotype 0:15) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 192) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 31 23S ribosomal RNA 153 > 192 23S ribosomal RNA site 32 152 23S rRNA intervening sequence BASE COUNT 50 a 42 c 59 g 40 t 1 others ORIGIN 1 aacggggcta aaccatgcac cgaagctgcg gcagcgaacg tatcacttaa aacgcttaac 61 gtgacgcaaa gccggcangt tcaagccaca ctaaacgttg agttggccgg tgtgctgaca 121 aacgaacagg cgttttaagg atacgttcgt tgggtagggg agcgttctgt aagccgttga 181 aggtggtctg tg // LOCUS YEPRGGL 177 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35811 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain E701; serotype 0:4,32) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 177) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 29 23S ribosomal RNA 139 > 177 23S ribosomal RNA site 30 138 23S rRNA intervening sequence BASE COUNT 43 a 40 c 57 g 37 t ORIGIN 1 cggggctaaa ccatgcaccg aagctgcggc agcgaacgta tcacccaagc caattcacgg 61 cagtggataa tgattgacgg agcgcagcga cgtcaatgcg tccaataaag tctagttggc 121 ttagggatac gttcgttggg taggggagcg ttctgtaagc cgttgaaggt ggcctgt // LOCUS YEPRGGM 191 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35812 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 8081; serotype 0:8) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 191) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 38 23S ribosomal RNA 148 > 191 23S ribosomal RNA site 39 147 23S rRNA intervening sequence BASE COUNT 51 a 39 c 63 g 38 t ORIGIN 1 aagatgtaac ggggctaaac catgcaccga agctgcggca gcgaacgtat cacccaagac 61 aattcacggc agtggataat gattgacgga gcgcagcgac gtcaatgcgt ccaataaagt 121 cgagttggct tagggatacg ttcgttgggt aggggagcgt tctgtaagcc gttgaaggtg 181 acctgtgagg g // LOCUS YEPRGGN 158 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35813 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 5081; serotype 0:13a,13b) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 158) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 17 23S ribosomal RNA 127 > 158 23S ribosomal RNA site 18 126 23S rRNA intervening sequence BASE COUNT 41 a 33 c 51 g 33 t ORIGIN 1 atgcaccgaa cgtgcggcag cgaacgtatc acccaagaca attcacggca gtggataatg 61 attgacggag cgcagcgacg tcaatgcgtc caataaagtc gagttggctt agggatacgt 121 tcgttgggta ggggagcgtt ctgtaagccg ttgaaggt // LOCUS YEPRGGO 180 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35814 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 9312/78; serotype 0:13,18) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 180) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 38 23S ribosomal RNA 148 > 180 23S ribosomal RNA site 39 147 23S rRNA intervening sequence BASE COUNT 50 a 36 c 58 g 36 t ORIGIN 1 aagatgtaac ggggctaaac catgcaccga agctgcggca gcgaacgtat cacccaagac 61 aattcacgga agtggataat gattgacgga gcgcagcgac gtcaatgcgt ccaataaagt 121 cgagttggct tagggatacg ttcgttgggt aggggagcgt tctgtaagcc gttgaaggtg // LOCUS YEPRGGP 180 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35815 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 874/77; serotype 0:20) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 180) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 38 23S ribosomal RNA 148 > 180 23S ribosomal RNA site 39 147 23S rRNA intervening sequence BASE COUNT 49 a 37 c 58 g 36 t ORIGIN 1 aagatgtaac ggggctaaac catgcaccga agctgcggca gcgaacgtat cacccaagac 61 aattcacggc agtggataat gattgacgga gcgcagcgac gtcaatgcgt ccaataaagt 121 cgagttggct tagggatacg ttcgttgggt aggggagcgt tctgtaagcc gttgaaggtg // LOCUS YEPRGGQ 180 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35816 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain E736; serotype 0:21) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 180) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 38 23S ribosomal RNA 148 > 180 23S ribosomal RNA site 39 147 23S rRNA intervening sequence BASE COUNT 48 a 38 c 58 g 36 t ORIGIN 1 aagatgtaac ggggctaaac catgcaccga agctgcggca gcgaacgtat cacccaagac 61 aattcacggc agtggataat gattgacgga gcgcagcgac gtcaatgcgt ccactaaagt 121 cgagttggct tagggatacg ttcgttgggt aggggagcgt tctgtaagcc gttgaaggtg // LOCUS YEPRGGR 180 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.enterocolitica 23S rRNA gene. ACCESSION M35817 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.enterocolitica (strain 2139/72; serotype 0:34) DNA. ORGANISM Yersinia enterocolitica Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 180) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA < 1 38 23S ribosomal RNA 148 > 180 23S ribosomal RNA site 39 147 23S rRNA intervening sequence BASE COUNT 49 a 37 c 58 g 36 t ORIGIN 1 aagatgtaac ggggctaaac catgcaccga agctgcggca gcgaacgtat cacccaagac 61 aattcacggc agtggataat gattgacgga gcgcagcgac gtcaatgcgt ccaataaagt 121 cgagttggct tagggatacg ttcgttgggt aggggagcgt tctgtaagcc gttgaaggtg // LOCUS YEPRGGS 153 bp ds-DNA BCT 07-AUG-1990 DEFINITION Y.bercovieri 23S rRNA gene. ACCESSION M35818 KEYWORDS 23S ribosomal RNA; ribosomal RNA. SOURCE Y.bercovieri (strain 3016/84; serotype 0:58,16) DNA. ORGANISM Yersinia bercovieri Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 153) AUTHORS Skurnik,M. and Toivanen,P. TITLE Intervening sequences (IVS) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y.enterocolitica and Salmonella typhimurium have common origin JOURNAL Unpublished (1900) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by M.Skurnik, 29-JUN-1990. Author address: M.Skurnik Turku University Dept of Medical Microbiology Kiinanmyllynkatu 13 SF-20520 Turku FINLAND email:mskurnik@finabo FEATURES from to/span description rRNA 110 > 153 23S ribosomal RNA site < 1 109 23S rRNA intervening sequence BASE COUNT 39 a 30 c 51 g 33 t ORIGIN 1 cagcgaacgt atcacccaag acaattcacg gcagtggata atgattgacg gagcgcagcg 61 acgtcaatgc gtccaataaa gtcgagttgg cttagggata cgttcgttgg gtaggggagc 121 gttctgtaag ccgttgaagg tgacctgtga ggg // LOCUS ECOINSW 49 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli insertion site for transposon Tn1545. ACCESSION M31752 KEYWORDS . SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 49) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 26 27 transposon Tn1545 insertion site BASE COUNT 12 a 10 c 0 g 27 t ORIGIN 1 cttttcccaa catttccttt tttattatta aaaatcattt ttttcttca // LOCUS ECOINSX 49 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli insertion site for transposon Tn1545. ACCESSION M31754 KEYWORDS . SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 49) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 26 27 transposon Tn1545 insertion site BASE COUNT 21 a 4 c 6 g 18 t ORIGIN 1 atttgaaaat gctgattctt ttatagataa aaatagcaat gcttaaata // LOCUS ECOINSY 49 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli insertion site for transposon Tn1545. ACCESSION M34227 KEYWORDS . SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 49) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 26 27 transposon Tn1545 insertion site BASE COUNT 16 a 8 c 5 g 20 t ORIGIN 1 tgttggattt catttcactt tctccataaa aaaaaacggt aatcatttt // LOCUS ECOINSZ 49 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli insertion site for transposon Tn1545. ACCESSION M35413 KEYWORDS . SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 49) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 26 27 transposon Tn1545 insertion site BASE COUNT 18 a 6 c 11 g 14 t ORIGIN 1 cacctcatac atttgatgtt tatcagtaaa aaaatgggag gattaaggg // LOCUS ECOT1545A1 136 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 5' junction. ACCESSION M35311 KEYWORDS . SEGMENT 1 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 136) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 26 27 E.coli end/ transposon Tn1545 start BASE COUNT 49 a 28 c 10 g 49 t ORIGIN 1 cttttcccaa catttccttt tttattttaa aaaatagcat aaaaatctag ttatccgcat 61 aaaaactgga cttatcacac tttatcaagg tcaaaaccac tcaatttact actaatttac 121 tacttatgaa tgagct // LOCUS ECOT1545A2 212 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 3' junction. ACCESSION M35315 KEYWORDS . SEGMENT 2 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 212) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 189 190 transposon Tn1545 end/ E.coli start BASE COUNT 84 a 29 c 28 g 71 t ORIGIN 1 gttcttgctt agtagtacaa atgaatttac tacttattta ccacttctga cagctaagac 61 atgaggaaat atgcaaagaa acgtgaagta tcttcctaca gtaaaaatac tcgaaagcac 121 atagaataag gctttacgag catttaagaa aatataaaaa gataattaga aatttatact 181 ttgtttatta ttaaaaatca tttttttctt ca // LOCUS ECOT1545B1 135 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 5' junction. ACCESSION M35312 KEYWORDS . SEGMENT 1 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 135) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review staff_entry FEATURES from to/span description recomb 26 27 E.coli end/ transposon Tn1545 start BASE COUNT 53 a 23 c 14 g 45 t ORIGIN 1 atttgaaaat gctgattctt ttatagataa aaatagcata aaaatctagt tatccgcata 61 aaaactggac ttatcacact ttatcaaggt caaaaccact caatttacta ctaatttact 121 acttatgaat gagct // LOCUS ECOT1545B2 212 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 3' junction. ACCESSION M35316 KEYWORDS . SEGMENT 2 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 212) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 189 190 transposon Tn1545 end/E.coli start BASE COUNT 88 a 29 c 30 g 65 t ORIGIN 1 gttcttgctt agtagtacaa atgaatttac tacttattta ccacttctga cagctaagac 61 atgaggaaat atgcaaagaa acgtgaagta tcttcctaca gtaaaaatac tcgaaagcac 121 atagaataag gctttacgag catttaagaa aatataaaaa gataattaga aatttatact 181 ttgtttctta taaaaatagc aatgcttaaa ta // LOCUS ECOT1545C1 135 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 5' junction. ACCESSION M35313 KEYWORDS . SEGMENT 1 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 135) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 26 27 E.coli end/ transposon Tn1545 start BASE COUNT 48 a 27 c 13 g 47 t ORIGIN 1 tgttggattt catttcactt tctccattaa aaatagcata aaaatctagt tatccgcata 61 aaaactggac ttatcacact ttatcaaggt caaaaccact caatttacta ctaatttact 121 acttatgaat gagct // LOCUS ECOT1545C2 212 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 3' junction. ACCESSION M35317 KEYWORDS . SEGMENT 2 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 212) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 189 190 transposon Tn1545 end/ E.coli start BASE COUNT 88 a 28 c 31 g 65 t ORIGIN 1 gttcttgctt agtagtacaa atgaatttac tacttattta ccacttctga cagctaagac 61 atgaggaaat atgcaaagaa acgtgaagta tcttcctaca gtaaaaatac tcgaaagcac 121 atagaataag gctttacgag catttaagaa aatataaaaa gataattaga aatttatact 181 ttgttttgat aaaaaaaaac ggtaatcatt tt // LOCUS ECOT1545D1 135 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 5' junction. ACCESSION M35314 KEYWORDS . SEGMENT 1 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 135) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 26 27 E.coli end/ transposon Tn1545 start BASE COUNT 51 a 28 c 13 g 43 t ORIGIN 1 cacctcatac atttgatgtt tatcagctaa aaatagcata aaaatctagt tatccgcata 61 aaaactggac ttatcacact ttatcaaggt caaaaccact caatttacta ctaatttact 121 acttatgaat gagct // LOCUS ECOT1545D2 212 bp ds-DNA BCT 07-AUG-1990 DEFINITION E.coli/transposon Tn1545 3' junction. ACCESSION M35318 KEYWORDS . SEGMENT 2 of 2 SOURCE E.coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 212) AUTHORS Caillaud,F. and Courvalin,P. TITLE Nucleotide sequence of the ends of the conjugative shuttle transposon Tn1545 JOURNAL Mol. Gen. Genet. 209, 110-115 (1987) STANDARD simple staff_review FEATURES from to/span description recomb 189 190 transposon Tn1545 end/ E.coli start BASE COUNT 87 a 26 c 37 g 62 t ORIGIN 1 gttcttgctt agtagtacaa atgaatttac tacttattta ccacttctga cagctaagac 61 atgaggaaat atgcaaagaa acgtgaagta tcttcctaca gtaaaaatac tcgaaagcac 121 atagaataag gctttacgag catttaagaa aatataaaaa gataattaga aatttatact 181 ttgttttgat aaaaaaatgg gaggattaag gg //