Path: utzoo!utgpu!watserv1!watmath!uunet!bu.edu!shelby!agate!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Syrian hamster MHC class I gene (Hm-1-a haplotype), exons 1, 2 and Message-ID: Date: 16 Nov 90 13:00:53 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 56 Approved: lear@genbank.bio.net Checksum: 12722 4 LOCUS HAMMHHM1A1 1711 bp ds-DNA ROD 16-NOV-1990 DEFINITION Syrian hamster MHC class I gene (Hm-1-a haplotype), exons 1, 2 and 3. ACCESSION M58148 M28982 KEYWORDS cell surface antigen; class I gene; major histocompatibility complex. SEGMENT 1 of 2 SOURCE Syrian hamster (Hm-1-a haplotype) liver DNA. ORGANISM Mesocricetus sp. Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetini. REFERENCE 1 (bases 1 to 1711) AUTHORS McGuire,K.L., Duncan,W.R. and Tucker,P.W. TITLE Structure of a class I gene from syrian hamster JOURNAL J. Immunol. 137, 366-372 (1986) STANDARD simple staff_review FEATURES from to/span description pept 88 157 MHC class I protein, exon 1 362 631 MHC class I protein, exon 2 843 + 1118 MHC class I protein, exon 3 IVS 158 361 MHC class I intron 1 IVS 632 842 MHC class I intron 2 IVS 1119 > 1711 MHC class I intron 3 BASE COUNT 427 a 431 c 459 g 394 t ORIGIN 1 agagaacctg gtagaagtct ctatgaagac aaattacaga gcacagggcc atatagggct 61 gtgcttgggc tccccctaac ccttaagatg gggatccctg tgctctgtgc cctcttgctg 121 atggctgcct cccaagcccc gaccaggacc catgctggtg agtgcaggct caggagggaa 181 atgacctctg tgtgtttggc gggggctgca ccaggaaagc tgtgtccctg catcgcccag 241 ccagaccctc ctgcctcttc cccacccgca tcctgagctc tgcgcccagc tcccctcccg 301 gcctgagtac cagcctgagg tccggggagg aggtcaaggt ctcaccatgc tccacaccca 361 ggctcgcact cgctgcggta tttctacatc attgtttcct ggcccgacct cgtggagccc 421 cggtacatgg aagtcggcta cgttgacgac acacagttcg tgcgcttcga cagcgacctg 481 gagaatccga gatatgagcc gcgggcgccg tggatggagc aggaggggcc agagtattgg 541 gagagggaga cacggggagc caaagactgg gaacagattt tccgagttga cctgaggacc 601 ctactaggct actacaacca gagtgagggc agtgagtgaa gatggaggtt aagactttcc 661 atgtccctag gtaagggcct gagttatgcc aggtcccaag tccaaggtcc aggaggagga 721 gaccagggac caggaccagt ttccctttca ggttagagga tacctgggtg ggcggggcac 781 gagcaggaca ggagggcaag gctgacctgg ggtgagcagg gctgaccttg ggatccccgc 841 agtctctcac atcattcaga gtatggtcgg ctgtcacgtg gggtcggacg ggcgcctcct 901 ccgcgggtac agtcaggacg cctatgatgg cgatgattac atcgccctga acgaggacct 961 gaggacgtgg actgcggctg acacagccac acagatcacc aggcgcaagt gggacctggc 1021 tggtgttgca gagcatgaaa gggcctacct ggaggacgag tgtgtgcagt ggctccgcag 1081 atacctggag aacaggaagg agcagctgct gcgcacaggt gcaggggctg cgggcaaatc 1141 ctacctctga cctcgggctt agttctgagg aagaagagac ccctcacctg ggggtaatgc 1201 cccattttct acttattttt aatttttaaa atttagtaca gaaaactcac actctaaaat 1261 tgacaagaac aaaggctata tccctctcag tgaatataca tggttggtga agccatcatg 1321 aattcgtgga agttccagtt ggattttaca cattcctttt gaaatataat tcatgaactt 1381 atccagcacc aacacgcaaa aaaaaaagga tagaaagaaa atccaagaca gatatataac 1441 tggaaaacaa ttaaccttat aacctgtttc aaaactcaga cctgtactca gacctttctc 1501 attcccaata tttagccttt cttgttgtct tttcgtcgtc atgctatact gtacacatac 1561 gtaaacttat ttacatatct gcatacattg ctgactacat atgaggaaat acaatgtaga 1621 ttttctacct gagattgtat gacctcactt aatatgtaca tgctaagttc atccagtttc 1681 ctgtgtagtt ttgtagttac attgtttaga g //