Path: utzoo!utgpu!watserv1!watmath!uunet!bu.edu!shelby!agate!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Syrian hamster MHC class I gene (Hm-1-a haplotype). Message-ID: Date: 16 Nov 90 13:00:55 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 71 Approved: lear@genbank.bio.net Checksum: 11810 5 LOCUS HAMMHHM1A2 2534 bp ds-DNA ROD 16-NOV-1990 DEFINITION Syrian hamster MHC class I gene (Hm-1-a haplotype). ACCESSION M58164 KEYWORDS cell surface antigen; class I gene; major histocompatibility complex. SEGMENT 2 of 2 SOURCE Syrian hamster (Hm-1-a haplotype) liver DNA. ORGANISM Mesocricetus sp. Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetini. REFERENCE 1 (bases 1 to 2534) AUTHORS McGuire,K.L., Duncan,W.R. and Tucker,P.W. TITLE Structure of a class I gene from syrian hamster JOURNAL J. Immunol. 137, 366-372 (1986) STANDARD simple staff_entry FEATURES from to/span description pept + 564 839 MHC class I protein, exon 4 966 1082 MHC class I protein, exon 5 1257 1289 MHC class I protein, exon 6 1424 1467 MHC class I protein, exon 7 IVS < 1 563 MHC class I intron 3 IVS 840 965 MHC class I intron 4 IVS 1083 1256 MHC class I intron 5 IVS 1290 1423 MHC class I intron 6 BASE COUNT 583 a 668 c 644 g 639 t ORIGIN 1 cttcttcttg tcctactttg atcccattta taccaatttc tgtctatttc tgatagctta 61 tataaaatct tctctgtatc aaatacaaag gtggagagtg tacacccttg tctccttcct 121 gtatttacag gaagctctgg gtgtctctcc tttagacata atatccacct gtctccatgt 181 ttctcacata tgggatgtgg gaagttctat agtgtctcct gaccctttat gagagactgg 241 ctttcccagg ctcgcccttc tgtcaggcag ttcagagtgt ctcaggaggg aaggagagaa 301 ggtccctgaa atgactaagg cagttcacct tcagtctgca gtgctgtgta gggccacaag 361 ccttgctcag gcccagttct ctgcccacac ctgaggtctc tggggtctga attcccaaag 421 aaagcattat ccagaaccca gtgtctaagc tacaggggct tttcacccct ccctcacccc 481 atttctgatc cacacaggga tggtcacagg gaccctgctg gagtccctac aaatcacctg 541 acatttccaa ctcttctcct cagaccctcc aaaggcacat gtgacccatc actccaaccc 601 tgaaggtaaa accaccctga ggtgctgggc cctgggcttc taccccgctg acatcaccct 661 gacctggaag agggatgagg aggaactgac ccaggacatg gagatggtgg agaccagacc 721 tgcaggagac ggaaccttcc agaagtgggc agctgtggag gtgcctattg gagaggagca 781 gagatacaca tgccatgtgg agcatgaggg actgtctgag cccctcaccc tgagatggag 841 taaggaggga ggggtgcaga gatggggtca gggaaacatg gagccttctg cagagcctga 901 gcagggtcag ggctgagaga tggggtcatg accctcacct tcccttcctg tccttccctt 961 cccagagcct cctcagtcca ctgtccccag catggcagtc attgctgttc tggttctcct 1021 tggagctgtg accatcattg gagctgtggt ggctgttgtg aggaagagga ggagaaacac 1081 aggtaggaag gggcagggtg tgagttctct ctcagcccct tttagcagtg tgctctgctc 1141 atggaaacac atccacaccc tcattgttcc tgtctctagc cagggtctgc tgtcagttct 1201 ggaaacttcc tagggtcagg gtcttccctg gtctctcaca tcttttcttg tcacaggtgg 1261 aaaaagaggg aactatgctc aggctccagg taactgtggg gaaccggctt gtccctaaag 1321 cctgttgagt gaagctggtt gggaaaccca acagcccata attcctcctc catccacatc 1381 ctctcagtaa ccgcaatggt ccttgtcatt tcttcttctg cagacaggga cagtgcccag 1441 agctctgact cctctctgga gacttgaaaa ggtgacactc tggggtcctg ggttggggct 1501 gaggaacaaa ggaaaagact ggtgaaggga ccagaccctc acccagcccc cctgctttat 1561 cagccatgac aggctgcaga aaagtcatgg aggcccctga ctcagcacat gttggacttg 1621 ctggtcctgc ccaggtcact aggaggtcag ataccaatca gaagttagct ggtggactct 1681 ggatgtgttt aaggctctgg gcatgcttta tggtaaaagt ggtctaccag tgacttgcaa 1741 acacatgaca accagttgac caatcggcac aggacagatt gcccagcaca gaagtgcacc 1801 aatcctgaga ctgttgctta cccttagaca ctccccttat actgcctggc agtttctctg 1861 ggtccttctc atgccaactg tcctgttgga catacgatgg cccctagtta atggggttag 1921 ctcattaaac aacaataact gactctttgc ttttgcatcg gaatgggtct cttggtgatt 1981 ttgggggttc agaatttaag cacaacactg tgtcccagga cttctcagaa cttagacatt 2041 tgaatgagtc acagtgggcg tttgagatgt ctttatactg actgtccatc actctttgtc 2101 tttagcttca gacagtggcc tcacagggac acattctcac tcaagaaaga gcaatgttgg 2161 aagctgtctg ctttctcctg tgaagagcat ccagcccggt cctgtccacc aggaccctac 2221 ccctgcacgg ccccttctac ctccacagtc aaccttcctg gtccagcaca ggcaggagga 2281 gacaactcta tcctgtcacc tgcatgcttc catgagctgc acaccttggc ttccccactg 2341 aaaataaaaa tctggatgtg aacttgatag ttcatgtcct tgacctctga aagtgtgatg 2401 gagaaaataa atggcagcat ggagaatctt ccagaacctg tgtctgctgt ggtgactgtc 2461 agcggggaca ggagtctgtg ggagctgagt gagatggggc tgtgacaggt agagctcagt 2521 ccacgtggct ttgg //