Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: V.cholerae IrgA (igrA) gene,. Message-ID: Date: 22 Nov 90 13:00:06 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 54 Approved: lear@genbank.bio.net Checksum: 55765 4 LOCUS VCHIRGA 1530 bp ds-DNA BCT 22-NOV-1990 DEFINITION V.cholerae IrgA (igrA) gene,. ACCESSION M37773 KEYWORDS iron-regulated protein; transcriptional regulation. SOURCE V.cholerae (strain 0395) DNA. ORGANISM Vibrio cholerae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Vibrionaceae. REFERENCE 1 (bases 1 to 1530) AUTHORS Goldberg,M.B., Boyko,S.A. and Calderwood,S.B. TITLE Transcriptional regulation by iron of a virulence gene of Vibrio cholerae, and its homology to the Escherichia coli fur system JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence kindly submitted by S.B.Calderwood, 16-AUG-1990. Infect Disease Unit Mass General Hosp Fruit Street Boston, MA 02114 FEATURES from to/span description pept 1077 > 1529 iron-regulated protein mRNA 1041 1530 IrgA mRNA signal 1027 1032 /new_qualifier="-10_signal" signal 1066 1070 Shine Dalgarno /new_qualifier="RBS" site 1529 1530 Vibrio cholerae/TnphoA junction BASE COUNT 393 a 361 c 394 g 382 t ORIGIN 1 atcgatgata aaaaatcccg ctgcggcggg attttttatt gccactcatc gggccttgct 61 tggcggagcg catcaataaa taggcgcagc cgaagtgggt gacgaccgag cggatagaag 121 cagttgattt ctgttggctg tgattgccat ccgttgacgc aaggaatgag gctgcccgga 181 tgcgccgttt caaaaccatt ggcaaaccaa gtgggaagca aaccaatacc acgaccttta 241 gcaatcgcat cggcttgcat ggcaagatta tcgctttgta aacgactctc tagtgctggc 301 agtgaataac tgccgaactc tggatggtgc agttcaagct ccgcgcgccg acaagcaata 361 aaatcaatcc atgggtgatg aatcagctca cgaggatggg tcggtttatc tcgatgggcc 421 aaatatttgg gagaggcgta agtggcatag cgccaatagc ctaagcgttc tttgcgataa 481 cccatggggg cggcgtgttc aatccaaatg atcaaatcgg gctcaaacac ctcatcactg 541 tgttgaaact ggctgagtag acggatcttc aatgtcgaat gctgctgcat aaactcatcc 601 aatacttggc tgagccagcc gcggatcaaa ttggggtgta ccaccagcgt gagttcgcca 661 gtcacttgat tgttcaattc ttgcaacgct tcctgacttt tattggccag ttcaagtagt 721 tgctccgagt aaaccgcaaa cacttctcct gctttggtga gcgttaagcg gttgccttga 781 cgcatcaaca agctttgtcc caagtcctct tcaagttgcg ccaaacggcg actcagggtg 841 gatttaggct gttcaagcgc tttggcagcg gcagtcaggc tcttatgttg gcaaagcgca 901 tggaaagctt ttacggcgct gagatcttgc ataggtattt gacccttaaa gaataattac 961 cacagacgtt ccatatttgg accgaactat tccatgtgtc gatctatctc cagtacagaa 1021 tatatgaata atccgcttct gaaattaaga ataattatca tttaaaggag tggtaaatgt 1081 ccagattcaa tccatccccc gtcagtttat ctgtgacact aggcttaatg ttttcggcta 1141 gcgcttttgc tcaagacgcg acgaaaacgg atgaaaccat ggtggtcact gcggcgggat 1201 acgcgcaagt gattcaaaat gcaccagcca gtatcagtgt gatttcaaga gaagatctgg 1261 aatctcgcta ttaccgtgat gtgaccgatg cgctaaaaag cgtaccgggt gtgacagtca 1321 ccggaggggg cgatactacc gatatcagca ttcgtggtat gggatcaaac tatactctta 1381 tcttggtgga tggtaagcgc caaacctcac gccagacccg tccaaacagc gatggcccgg 1441 gcattgagca aggttggtta ccgccactgc aagcgattga acgtatcgag gtgatccgtg 1501 gcccgatgtc tacgctgtac ggctcggatg //