Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!yalemed.bitnet!KIDD
From: KIDD@yalemed.bitnet
Newsgroups: bionet.molbio.genome-program
Subject: (none)
Message-ID: <9011291658.AA00234@genbank.bio.net>
Date: 29 Nov 90 16:29:00 GMT
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Response to David Curtis question of 27 Nov 90 re:
 "reference for calculating limits for lod scores"

The question was not phrased quite correctly, but the wording used does
highlight a common misconception. A lod score is itself a kind of significance
level (like a p value) so one doesn't usually calculate a confidence limit for
the lod score itself. One does use lod scores to determine confidence limits
for recombination frequencies. A good reference for that is:

Conneally et al. (1985) Human Gene Mapping Workshop 8 (HGM8) Cytogenetics and
Cell Genetics 40: 356-359.

                 G. Mapper