Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Helicobacter felis 16S rRNA. Message-ID: Date: 1 Dec 90 13:00:13 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 58 Approved: lear@genbank.bio.net Checksum: 44151 4 LOCUS HECRR16SA 1443 bp ss-rRNA BCT 01-DEC-1990 DEFINITION Helicobacter felis 16S rRNA. ACCESSION M57398 M35047 M37642 M42976 M42977 KEYWORDS 16S rRNA. SOURCE Helicobacter felis (strain CS1, ATCC 49179) 16S rRNA. ORGANISM Helicobacter felis Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Aerobic/microaerophilic, motile, helical/vibrioid bacteria. REFERENCE 1 (bases 1 to 1443) AUTHORS Paster,B.J., Lee,A., Fox,J.G., Dewhirst,F.E., Tordoff,L.A., Fraser,G.J., O'Rourke,J.L., Taylor,N.S. and Ferrero,R. TITLE The phylogeny of Helicobacter felis sp. nov., Helicobacter mustelae, and related bacteria JOURNAL Unpublished (0) STANDARD full staff_entry REFERENCE 2 (bases 9 to 1443) AUTHORS Paster,B.J., Lee,A., Dewhirst,F.E., Fox,J.G., Tordoff,L.A. and Ferrero,R. TITLE The phylogeny of Helicobacter felis sp. nov., a spiral-shaped bacterium isolated from the gastric mucosa of the cat, Helicobacter mustelae, and related bacteria JOURNAL Unpublished (1990) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)] kindly submitted by B.J.Paster, 08-AUG-1990. Forsyth Dental Center 140 Fenway Boston, MA 02115 FEATURES from to/span description rRNA 1 1443 16S rRNA BASE COUNT 371 a 309 c 416 g 317 t 30 others ORIGIN 1 tttatggaga gtttgatcct ggctcagagt gaacgctggc ggcgtgccta atacatgcaa 61 gtcgaacgat gaagcctagc ttgctaggcg gattagtggc gcacgggtga gtaacgcata 121 gatgacatgc cctttagttt gggatagcca ctagaaatgg tgattaatac caaatactcc 181 tacgggggaa agatttatcg ctaaaggatt ggtctatgtc ctatcagctt gttggtgagg 241 taaaggctca cnnaggctat gacgggtatc cggcctgaga gggtgaacgg acacactgga 301 actgagacac ggtccagact ccnncgggag gcagcagtag ggaatattgc tcaatgggcg 361 caagcctgaa gcagcaacgc cgcgtggagg atgaaggttt taggattgta aactcctttt 421 gtcagagaag ataatgacgg tatctgacga ataagcaccg gctanctccg tgccagcagc 481 cgcggtaata cggagggtgc nagcgttact cggaatcnct gggcgtaaag agtgcgtagg 541 cggggttgta agtcagatgt gaaatcctat ggcttaacca tagaactgca tttgaaacta 601 caactctgga gtgtgggaga ggtaggtgga attcttggtg taggggtaaa atccgtagag 661 atcaagagga atactcattg cgaaggcgac ctgctggaac aatactgacg ctgatgcncg 721 aaagcgtggg gagcaaacag gattagatac cctggtagtc cacgccctaa acgatggatg 781 ctagttgttg gggggcttgt cctcccagta atgcagctaa cgccttaagc atcccgcctg 841 gggagtacgg tcgcaagatt aaaactcaaa ggaatagacg gggacccgca caagcnnnnn 901 nnnnngtggt ttaattcgan nnnnnncgaa gaaccttacc taggcttgac attgaangaa 961 tctgctagaa atagtggagt gtctagcttg ctagaccctg aaaacaggtg ctgcacggct 1021 gtcgtcagct cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca accctctttc 1081 ttagttgcta acaggtagtg ctgagctctc taagaatact gcctgcgtaa gcaggaggaa 1141 ggtgaggacg acgtcaagtc atcatggccc ttacgcctag ggctacacac gtgctacaat 1201 ggggtgcaca aagagatgca atgccgcgag gttgagccaa tcttaaaaac nnctctcagt 1261 tcggattgca ggctgcaact cgcctgcatg aagctggaat cgctagtaat cgcaaatcag 1321 ccatgttgcg gtgaatacgt tcccgggtct tgtactcacc gnncgtcaca ccatgggagt 1381 tgtgtttgcc ttaagtcagg atgctaaggt agctactgcc cacggcacac acagcgactg 1441 ggg //