Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!samsung!cs.utexas.edu!wuarchive!usc!ucselx!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Canine parvovirus NS-1 protein and capsid proteins VP-1 and VP-2 Message-ID: Date: 25 Jan 91 13:01:50 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 123 Approved: lear@genbank.bio.net Checksum: 32161 8 LOCUS PVCPVC 5124 bp ds-DNA VRL 25-JAN-1991 DEFINITION Canine parvovirus NS-1 protein and capsid proteins VP-1 and VP-2 genes, complete cds. ACCESSION M38245 KEYWORDS NS1 protein; capsid protein VP1; capsid protein VP2. SOURCE Canine parvovirus DNA. ORGANISM Canine parvovirus Viridae; ss-DNA nonenveloped viruses; Parvoviridae; Parvovirus; Feline parvovirus. REFERENCE 1 (bases 1 to 5124) AUTHORS Parrish,C.R. TITLE Infectious molecular clones of Canine parvovirus and Feline.. JOURNAL Unpublished (1990) STANDARD simple staff_entry COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)] kindly submitted by C.R.Parrish, 27-AUG-1990. James A. Baker Institute New York State College of Veterinary Medicine Cornell University Ithaca, NY 14853 FEATURES Location/Qualifiers CDS 273..2279 /note="NS-1 gene" /codon_start=273 /product="NS1 protein" CDS 2286..4541 /codon_start=2286 /product="capsid protein VP1" CDS 2787..4541 /codon_start=2787 /product="capsid protein VP2" BASE COUNT 1815 a 838 c 1037 g 1434 t ORIGIN map position 1-100. 1 atcattcttt agaaccaact gaccaagttc acgtacgtat gacgtgatga cgcgcgctgc 61 gcgcgctgcc tacggcagtc acacgtcata cgtacgctcc ttggtcagtt ggttctaaag 121 aatgataggc ggtttgtgtg tttaaacttg ggcgggaaaa ggtggcgggc taattgtggg 181 cgtggttaaa ggtataaaag acaaaccata gaccgttact gacattcgct tcttgtcttt 241 gacagagtga acctctctta ctttgactaa ccatgtctgg caaccagtat actgaggaag 301 ttatggaggg agtaaattgg ttaaagaaac atgcagaaaa tgaagcattt tcgtttgttt 361 ttaaatgtga caacgtccaa ctaaatggaa aggatgttcg ctggaacaac tataccaaac 421 caattcaaaa tgaagagcta acatctttaa ttagaggagc acaaacagca atggatcaaa 481 ccgaagaaga agaaatggac tgggaatcgg aagttgatag tctcgccaaa aagcaagtac 541 aaacttttga tgcattaatt aaaaaatgtc tttttgaagt ctttgtttct aaaaatatag 601 aaccaaatga atgtgtttgg tttattcaac atgaatgggg aaaagatcaa ggctggcatt 661 gtcatgtttt acttcatagt aagaacttac aacaagcaac tggtaaatgg ctacgcagac 721 aaatgaatat gtattggagt agatggttgg tgactctttg ttcggtaaac ttaacaccaa 781 ctgaaaagat taagctcaga gaaattgcag aagatagtga atgggtgact atattaacat 841 acagacataa gcaaacaaaa aaagactatg ttaaaatggt tcattttgga aatatgatag 901 catattactt tttaacaaag aaaaaaattg tccacatgac aaaagaaagt ggctattttt 961 taagtactga ttctggttgg aaatttaact ttatgaagta tcaagacaga caaattgtca 1021 gcacacttta cactgaacaa atgaaaccag aaaccgttga aaccacagtg acgacagcac 1081 aggaaacaaa gcgcgggaga attcaaacta aaaaggaagt gtcaatcaaa tgtactttgc 1141 gggacttggt tagtaaaaga gtaacatcac ctgaagactg gatgatgtta caaccagata 1201 gttatattga aatgatggca caaccaggag gtgaaaatct tttaaaaaat acacttgaaa 1261 tttgtacttt gactttagca agaacaaaaa cagcatttga attaatactt gaaaaagcag 1321 ataatactaa actaactaac tttgatcttg caaattctag aacatgtcaa atttttagaa 1381 tgcacggatg gaattggatt aaagtttgtc acgctatagc atgtgtttta aatagacaag 1441 gtggtaaaag aaatacagtt ctttttcatg gaccagcaag tacaggaaaa tctatcattg 1501 ctcaagccat agcacaagct gtgggtaatg ttggttgtta taatgcagca aatgtaaatt 1561 ttccatttaa tgactgtacc aataaaaatt taatttggat tgaagaagct ggtaactttg 1621 gtcaacaagt taatcaattt aaagcaattt gttctggaca aacaattaga attgatcaaa 1681 aaggtaaagg aagtaagcaa attgaaccaa ctccagtaat tatgacaact aatgaaaata 1741 taacaattgt gagaattgga tgtgaagaaa gacctgaaca tacacaacca ataagagaca 1801 gaatgttgaa cattaagtta gtatgtaagc ttccaggaga ctttggtttg gttgataaag 1861 aagaatggcc tttaatatgt gcatggttag ttaaacatgg ttatgaatca accatggcta 1921 actatacaca tcattgggga aaagtaccag aatgggatga aaactgggcg gagcctaaaa 1981 tacaagaagg tataaattca ccaggttgca aagacttaga gacacaagcg gcaagcaatc 2041 ctcagagtca agaccaagtt ctaactcctc tgactccgga cgtagtggac cttgcactgg 2101 aaccgtggag tactccagat acgcctattg cagaaactgc aaatcaacaa tcaaaccaac 2161 ttggcgttac tcacaaagac gtgcaagcga gtccgacatg gtccgaaata gaggcagacc 2221 tgagagccat ctttacttct gaacaattgg aagaagattt tcgagacgac ttggattaag 2281 gtacgatggc acctccggca aagagagcca ggagaggtaa gggtgtgtta gtaaagtggg 2341 gggaggggaa agatttaata acttaactaa gtatgtgttt ttttatagga cttgtgcctc 2401 caggttataa atatcttggg cctgggaaca gtcttgacca aggagaacca actaaccctt 2461 ctgacgccgc tgcaaaagaa cacgacgaag cttacgctgc ttatcttcgc tctggtaaaa 2521 acccatactt atatttctcg ccagcagatc aacgctttat agatcaaact aaggacgcta 2581 aagattgggg ggggaaaata ggacattatt tttttagagc taaaaaggca attgctccag 2641 tattaactga tacaccagat catccatcaa catcaagacc aacaaaacca actaaaagaa 2701 gtaaaccacc acctcatatt ttcatcaatc ttgcaaaaaa aaaaaaagcc ggtgcaggac 2761 aagtaaaaag agacaatctt gcaccaatga gtgatggagc agttcaacca gacggtggtc 2821 aacctgctgt cagaaatgaa agagctacag gatctgggaa cgggtctgga ggcgggggtg 2881 gtggtggttc tgggggtgtg gggatttcta cgggtacttt caataatcag acggaattta 2941 aatttttgga aaacggatgg gtggaaatca cagcaaactc aagcagactt gtacatttaa 3001 atatgccaga aagtgaaaat tatagaagag tggttgtaaa taatatggat aaaactgcag 3061 ttaacggaaa catggcttta gatgatattc atgcacaaat tgtaacacct tggtcattgg 3121 ttgatgcaaa tgcttgggga gtttggttta atccaggaga ttggcaacta attgttaata 3181 ctatgagtga gttgcattta gttagttttg aacaagaaat ttttaatgtt gttttaaaga 3241 ctgtttcaga atctgctact cagccaccaa ctaaagttta taataatgat ttaactgcat 3301 cattgatggt tgcattagat agtaataata ctatgccatt tactccagca gctatgagat 3361 ctgagacatt gggtttttat ccatggaaac caaccatacc aactccatgg agatattatt 3421 ttcaatggga tagaacatta ataccatctc atactggaac tagtggcaca ccaacaaata 3481 tataccatgg tacagatcca gatgatgttc aattttatac tattgaaaat tctgtgccag 3541 tacacttact aagaacaggt gatgaatttg ctacaggaac attttttttt gattgtaaac 3601 catgtagact aacacataca tggcaaacaa atagagcatt gggcttacca ccatttctaa 3661 attctttgcc tcaatctgaa ggagctacta actttggtga tataggagtt caacaagata 3721 aaagacgtgg tgtaactcaa atgggaaata caaactatat tactgaagct actattatga 3781 gaccagctga ggttggttat agtgcaccat attattcttt tgaggcgtct acacaagggc 3841 catttaaaac acctattgca gcaggacggg ggggagcgca aacagatgaa aatcaagcag 3901 cagatggtaa tccaagatat gcatttggta gacaacatgg tcaaaaaact accacaacag 3961 gagaaacacc tgagagattt acatatatag cacatcaaga tacaggaaga tatccagaag 4021 gagattggat tcaaaatatt aactttaacc ttcctgtaac aaatgataat gtattgctac 4081 caacagatcc aattggaggt aaaacaggaa ttaactatac taatatattt aatacttatg 4141 gtcctttaac tgcattaaat aatgtaccac cagtttatcc aaatggtcaa atttgggata 4201 aagaatttga tactgactta aaaccaagac ttcatgtaaa tgcaccattt gtttgtcaaa 4261 ataattgtcc tggtcaatta tttgtaaaag ttgcgcctaa tttaacaaat gaatatgatc 4321 ctgatgcatc tgctaatatg tcaagaattg taacttactc agatttttgg tggaaaggta 4381 aattagtatt taaagctaaa ctaagagcct ctcatacttg gaatccaatt caacaaatga 4441 gtattaatgt agataaccaa tttaactatg taccaagtaa tattggaggt atgaaaattg 4501 tatatgaaaa atctcaacta gcacctagaa aattatatta acatacttac tatgttttta 4561 tgtttattac atatcaacta gcacctagaa aattatatta atatacttac tatgttttta 4621 tgtttattac atattatttt aagattaatt aaattacagc atagaaatat tgtacttgta 4681 tttgatatag gatttagaag gtttgttata tggtatacaa taactgtaag aaatagaaga 4741 acatttagat catagttagt agtttgtttt ataaaatgta ttgtaaacta ttaatgtatg 4801 ttgttatggt gtgggtggtt ggttggtttg cccttagaat atgttaagga ccaaaaaaaa 4861 tcaataaaag acatttaaaa ctaaatggcc tcgtatactg tctataaggt gaactaacct 4921 taccataagt atcaatctgt ctttaagggg ggggtgggtg ggagatgcac aacatcagta 4981 gactgactgg cctggttggt tgctctgctt aatcaaccag accgctatgc ggtctggttg 5041 attaagcgca accaaccagg ccagtcagtc tactgatgtt gtgcatctcc cacccacccc 5101 ccccttaaag acagattgat actt //