Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human respiratory syncytial virus (RSV), fusion protein F-22K Message-ID: Date: 23 Feb 91 13:00:29 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 38 Approved: lear@genbank.bio.net Checksum: 50312 2 LOCUS RSHA5 96 bp ss-RNA VRL 23-FEB-1991 DEFINITION Human respiratory syncytial virus (RSV), fusion protein F-22K protein gene junction. ACCESSION D00396 KEYWORDS 22K protein; F protein; consensus gene-end sequence; consensus gene-start sequence; flanking region; fusion protein; intergenic region. SEGMENT 5 of 5 SOURCE A library of cDNA clones derived from RSV-subgroup B strain 18537- infected cell mRNAs, polycistronic cDNA clone, M32. ORGANISM Human respiratory syncytial virus Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses; Paramyxoviridae; Pneumovirus. REFERENCE 1 (bases 1 to 96) AUTHORS Johnson,P.R. and Collins,P.L. TITLE The A and B subgroups of human respiratory syncytial virus: Comparison of intergenic and gene-overlap sequences JOURNAL J. Gen. Virol. 69, 2901-2906 (1988) STANDARD full staff_entry COMMENT Intergenic and flanking gene regions of RSV subgroup B 18537 were determined and compared with those of the subgroup A. mRNA sense is shown below. FEATURES Location/Qualifiers misc_signal 9..20 /note="conserved gene-end sequence" misc_RNA 21..76 /note="F-22K intergenic region" CDS 86..>96 /note="22K protein (amino terminus)" /codon_start=86 BASE COUNT 42 a 24 c 11 g 19 t ORIGIN 8 bp upstream of gene-end sequence for F. 1 caactcatag ttacataaaa ccccaagtat cacaatcaaa cactaaatcg acacatcatt 61 cacaaaatta acaactgggg caaatatgtc gcgaag //