Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human respiratory syncytial virus (RSV), membrane-associated matrix Message-ID: Date: 23 Feb 91 13:00:35 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 34 Approved: lear@genbank.bio.net Checksum: 07216 2 LOCUS RSHA1 28 bp ss-RNA VRL 23-FEB-1991 DEFINITION Human respiratory syncytial virus (RSV), membrane-associated matrix protein M- small hydrophobic protein 1A gene junction. ACCESSION D00392 KEYWORDS consensus gene-end sequence; consensus gene-start sequence; flanking region; intergenic region; membrane-associated matrix protein; small hydrophobic protein. SEGMENT 1 of 5 SOURCE A library of cDNA clones derived from RSV-subgroup B strain 18537- infected cell mRNAs, polycistronic cDNA clones, B75, X55, and mRNA. ORGANISM Human respiratory syncytial virus Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses; Paramyxoviridae; Pneumovirus. REFERENCE 1 (bases 1 to 28) AUTHORS Johnson,P.R. and Collins,P.L. TITLE The A and B subgroups of human respiratory syncytial virus: Comparison of intergenic and gene-overlap sequences JOURNAL J. Gen. Virol. 69, 2901-2906 (1988) STANDARD full staff_entry COMMENT Intergenic and flanking gene regions of RSV subgroup B 18537 were determined and compared with those of the subgroup A. Respiratory syncytial virus is a negative-strand RNA pleomorphic enveloped virus. Ths positive strand is shown below. FEATURES Location/Qualifiers misc_signal 8..19 /note="conserved gene-end sequence" misc_RNA 20..>28 /note="M-1A intergenic region" BASE COUNT 15 a 3 c 4 g 6 t ORIGIN 7 bp upstream of conserved gene-end sequence for M. 1 tgcgaatagg taaataaaac caaaatat //