Path: utzoo!utgpu!watserv1!watmath!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Dengue virus type 1, capsid, premembrane, membrane, envelope and Message-ID: Date: 5 Mar 91 13:14:01 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 76 Approved: lear@genbank.bio.net Checksum: 02283 5 LOCUS DENTAH 2474 bp ss-RNA VRL 05-MAR-1991 DEFINITION Dengue virus type 1, capsid, premembrane, membrane, envelope and nonstructural protein genes. ACCESSION D00502 KEYWORDS capsid protein; envelope protein; membrane protein; nonstructural protein; premembrane protein; structural protein. SOURCE Dengue virus type 1 (strain Thailand AHF82-80), cDNA to viral RNA. ORGANISM Dengue virus type 1 Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Flaviviridae; Flavivirus (arbovirus group B). REFERENCE 1 (bases 1 to 2474) AUTHORS Chu,M.C., O'Rourke,E.J. and Trent,D.W. TITLE Genetic relatedness among structual protein genes of dengue 1 virus strains JOURNAL J. Gen. Virol. 70, 1701-1712 (1989) STANDARD full staff_entry COMMENT The preM-M coding regions are located between putative signalase cleavage sites that appear to be conserved among DEN-1 strains. FEATURES Location/Qualifiers CDS 102..>2474 /note="polyprotein precursor" mat_peptide 102..443 /note="capsid (C) protein" mat_peptide 444..716 /note="premembrane (prM) protein" mat_peptide 717..941 /note="membrane (M) protein" mat_peptide 942..2423 /note="envelope (E) protein" mat_peptide 2424..>2474 /note="NS1 protein, amino terminus" BASE COUNT 780 a 516 c 641 g 537 t ORIGIN 5'end of virus genome. 1 ggataaccaa ttcacacaag gaaacagcta tcaccagatc tacgccggaa gcttgcttaa 61 cgttagacta acagtttttt attagagaga gcagatctct gatgaacaac caacggaaaa 121 agacgggtaa cccgtctttc aatatgctga aacgcgcgag aaaccgcgtg tcaactggtt 181 cacagctggc gaaaagattc tcaaaaggat tgctttcagg ccaaggaccc atgaaattgg 241 tgatggcttt cgtagcattt ctaagatttc tagccatacc cccaacagca ggaattttga 301 aaagatgggg ctcattcaag aagaatggag cgatcaacgt attacggggt ttcagaaaag 361 agatctcaaa catgttgaac ataatgaaca ggaggagaag atccgtgacc atgatcctca 421 tgctgctgcc cacagctctg gcgttccatc tgaccacacg agggggagag ccgactttga 481 tagttagtaa gcaggaaaga gggaagtcac tcttgtttaa gacctctgca ggtgtcaata 541 tgtgcactct cattgcgatg gatttgggag agttatgtga ggacacaatg acctacaaat 601 gcccccggat gactgaggcg gaaccagatg acgttgactg ctggtgcaat gccacagaca 661 catgggtgac ctatgggacg tgttctcaaa ccggcgaaca ccgacgagac aaacgttccg 721 tggcactgga cccacacgtg ggacttggtc tagaaacaag aaccgaaaca tggatgtcct 781 ctgaaggcgc ctggaaacaa atacaaaaag tggagacttg ggctttgaga cacccaggat 841 tcacggtgat aggccttttt ttagcacatg ccataggaac atccatcact cagaaaggga 901 tcattttcat tttgctgatg ctggtaacac catcaatggc catgcgatgc gtgggaatag 961 gcaacagaga cttcgttgaa ggactgtcag gagcaacgtg ggtggacgtg gtattggagc 1021 atggaagctg cgtcaccacc atggcaaaaa ataaaccaac attggacatt gaactcttga 1081 agacggaggt cacgaaccct gccgtcctgc gcaaactgtg cattgaagct aaaatatcaa 1141 acaccaccac cgattcgaga tgtccaacac aaggagaagc cacgctggtg gaagaacagg 1201 acacgaactt tgtgtgccga cgaacgttcg tggacagagg ctggggcaat ggttgtgggc 1261 tattcggaaa aggtagctta ataacgtgtg ctaagtttaa gtgtgtgaca aaactggaag 1321 gaaagatagt ccaatatgaa aacttaaaat attcagtcat agtcaccgta cacactggag 1381 accaacatca agttggaaat gagaccacag aacatggaac aattgcaacc ataacacctc 1441 aagctcccac gtcggaaata cagctgacag actacggagc tctaacattg gattgttcac 1501 ctagaacagg gctagacttt aatagagtgg tgttgttgac aatgaagaaa aaatcatggc 1561 tcgtccacaa acaatggttt ctagacttac cactgccttg gacctcgggg gcttcaacat 1621 cccaagagac ttggaataga caagacttgc tggtcacatt taagacagct catgcaaaaa 1681 agcaggaagt agtcgtacta ggatcacaag aaggagcaat gcacactgcg ctgactgggg 1741 cgacagaaat ccaaacgtct ggaacgacaa caatttttgc aggacacctg aaatgcagac 1801 taaaaatgga taaactgact ttaaaagggg tatcatatgt aatgtgcaca gggtcattca 1861 agttagagaa ggaagtggct gagacccagc atggaactgt tctagtgcag gttaaatacg 1921 aaggaacaga tgcaccatgc aagatcccct tctcgtccca agatgagaaa ggagtaaccc 1981 agaatgggag attgataaca gccaacccca tagtcattga caaagaaaaa ccagtcaaca 2041 ttgaagcgga gccacctttt ggtgagagct atattgtggt aggagcaggt gaaaaagctt 2101 tgaaactaag ctggttcaag aagggaagca gtatagggaa aatgtttgaa gcaactgccc 2161 gtggagcacg aaggatggcc atcctgggag acaccgcatg ggacttcggt tctataggag 2221 gggtgttcac gtctgtggga aaactgatac accagatttt tgggactgcg tatggagttt 2281 tgttcagcgg ggtttcttgg accatgaaaa taggaatagg gattctgctg acatggctag 2341 gattaaattc aaggagcacg tccctttcaa tgacgtgtat cgcagttggc atggtcacac 2401 tgtacctagg agtcatggtt caggcggact cgggatgtgt aatcaactgg aaaggcaaag 2461 aactgaaatg tggc //