Path: utzoo!utgpu!watserv1!watmath!uunet!lll-winken!elroy.jpl.nasa.gov!sdd.hp.com!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Cucumber mosaic virus RNA 3, coat protein gene and flanks. Message-ID: Date: 5 Mar 91 13:14:49 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 50 Approved: lear@genbank.bio.net Checksum: 04193 3 LOCUS MCVRNA3C 1255 bp ss-RNA VRL 05-MAR-1991 DEFINITION Cucumber mosaic virus RNA 3, coat protein gene and flanks. ACCESSION D00462 KEYWORDS coat protein. SOURCE Cucumber mosaic virus (strain C) propagated in Nicotiana tabacum cv. Xanthi, cDNA to viral RNA, clone pC9.9. ORGANISM Cucumber mosaic virus Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses; Cucumovirus. REFERENCE 1 (bases 1 to 1255) AUTHORS Quemada,H., Kearney,C., Gonsalves,D. and Slightom,J.L. TITLE Nucleotide sequences of the coat protein genes and flanking regions of cucumber mosaic virus strains C and WL RNA 3 JOURNAL J. Gen. Virol. 70, 1065-1073 (1989) STANDARD full staff_entry COMMENT Submitted in computer readable form by H.D. Quemada on 15-Aug-1989. In [J. Gen. Virol. 70, 1065-1073 (1989)], they compare these sequences of C and WL strains to those published for other cucumber mosaic virus strains, and present evidence that C strain belongs to the WT group while WL strain belongs to the S group. FEATURES Location/Qualifiers misc_feature 224..224 /note="start site of subgenomic RNA 4 (putative)" CDS 298..954 /note="coat protein" BASE COUNT 285 a 311 c 298 g 361 t ORIGIN 342 bp upstream of AatII site. 1 cactttggtg cgtattagta tataagtatt tgtgagtctg tacataatac tatatctata 61 gagtcctgtg tgagttgata cagtagacat ctgtgacgcg atgccgtgtt gagaagggat 121 cacatctggt tttagtaagc ctacatcata gttttgaggt tcaattcctc ttactccctg 181 ttgagtacct tactttctca tggatgcttc tccgcgagat tgcgttattg tctactgact 241 atatagagag tgtgtgtgct gtgttttctc ttttgtgtcg tagaattgag tcgagtcatg 301 gacaaatctg aatcaaccag tgctggtcgt aaccatcgac gtcgtccgcg tcgtggttcc 361 cgctccgccc cctcctccgc ggatgctaac tttagagtct tgtcgcagca gctttcgcga 421 cttaataaga cgttagcagc tggtcgtcca actattaacc acccaacctt tgtagggagt 481 gaacgctgta gacctgggta cacgttcaca tctattaccc taaagccacc aaaaatagac 541 cgtgagtctt attacggtaa aaggttgtta ctacctgatt cagtcacgga atatgataag 601 aagcttgttt cgcgcattca aattcgagtt aatcctttgc cgaaatttga ttctaccgtg 661 tgggtgacag tccgtaaagt tcctgcctcc tcggacttat ccgttgccgc catctctgct 721 atgttcgcgg acggagcctc accggtactg gtttatcagt atgccgcatc tggagtccaa 781 gccaacaaca aactgttgtt tgatctttcg gcgatgcgcg ctgatatagg tgacatgaga 841 aagtacgccg tcctcgtgta ttcaaaagac gatgcgctcg agacggacga gctagtactt 901 catgttgaca tcgagcacca acgcattccc acatctggag tgctcccagt ctgattccgt 961 gttcccagaa ccctccctcc gatctctgtg gcgggagctg agttggcagt tctactacaa 1021 actgtctgga gtcactaaac gttttacggt gaacgggttg tccatccagc ttacggctaa 1081 aatggtcagt cgtggagaaa tccacgccag cagatttaca aatctctgag gcgcctttga 1141 aaccatctcc taggtttctt cggaagggct tcggtccgtg tacctctagc gcaacgtgct 1201 agtttcaggg tacgggtgcc cccccacttt cgtgggggcc tccaaaagga gacca //