Path: utzoo!utgpu!watserv1!watmath!uunet!elroy.jpl.nasa.gov!usc!ucselx!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Potato virus Y (PVY) genome, 5' end. Message-ID: Date: 5 Mar 91 13:15:19 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 29 Approved: lear@genbank.bio.net Checksum: 43751 2 LOCUS PVYE1 173 bp ss-RNA VRL 05-MAR-1991 DEFINITION Potato virus Y (PVY) genome, 5' end. ACCESSION D00488 KEYWORDS non-coding region. SEGMENT 1 of 2 SOURCE Potato virus Y (strain MM) genomic RNA and cDNA to genomic RNA, clones pZO[177 and 171]. ORGANISM Potato virus Y Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses; Potyvirus. REFERENCE 1 (bases 1 to 173) AUTHORS Turpen,T. TITLE Molecular cloning of a potato virus Y genome: nucleotide sequence homology in non-coding regions of potyviruses JOURNAL J. Gen. Virol. 70, 1951-1960 (1989) STANDARD full staff_entry COMMENT The 5' end of the RNA genome contains the presumptive site of covalent linkage to the VPg. The 5' and 3' non-coding regions contain 72% and 61% A+U nucleotides, respectively. FEATURES Location/Qualifiers misc_signal 164..172 /note="plant consensus sequence for translation initiation sites" BASE COUNT 64 a 33 c 16 g 60 t ORIGIN 5' end of PVY genomic RNA. 1 aaattaaaac ataacataca acataaacga aagcaatcaa attttcaagc atttttcttg 61 agctctttga tttttcctgc ataaattaag cactttgatc aacaacatag tctcgatttt 121 aatatttcaa ttgtttccag ttttctctaa tagcactcca aactaaaatg gca //