Path: utzoo!utgpu!watserv1!watmath!uunet!stanford.edu!agate!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Potato virus Y (PVY) genome, 3' end. Message-ID: Date: 5 Mar 91 13:15:21 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 33 Approved: lear@genbank.bio.net Checksum: 60915 2 LOCUS PVYE2 276 bp ss-RNA VRL 05-MAR-1991 DEFINITION Potato virus Y (PVY) genome, 3' end. ACCESSION D00489 KEYWORDS coat protein; non-coding region. SEGMENT 2 of 2 SOURCE Potato virus Y (strain MM) genomic RNA and cDNA to genomic RNA, clones pZO[171 and 174]. ORGANISM Potato virus Y Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses; Potyvirus. REFERENCE 1 (bases 1 to 276) AUTHORS Turpen,T. TITLE Molecular cloning of a potato virus Y genome: nucleotide sequence homology in non-coding regions of potyviruses JOURNAL J. Gen. Virol. 70, 1951-1960 (1989) STANDARD full staff_entry COMMENT Submitted in computer readable form by T.H. Turpen on 19-Mar-1990. The 5' end of the RNA genome contains the presumptive site of covalent linkage to the VPg. The 5' end 3' non-coding regions contain 72% and 61% A+U nucleotides, respectively. FEATURES Location/Qualifiers CDS <1..9 /note="coat protein" misc_feature 275..275 /note="poly(A) site" BASE COUNT 83 a 37 c 63 g 93 t ORIGIN About 9.2 kb after segment 1. 1 gaaatgtgac tgatgtggtc tctgggatga aatattatta tatgtagtat gcaatatata 61 gtatggcttt tctcgttcca gtctttatat taatgagagt aacttaagta agtaatttgt 121 acttcaagga ttaatcaagg tgactctctg acactctcag tgaggtgact tgtttagtct 181 gagtttactt attgtgagta taaagaatct ctcagaaaac gagagtgact tctagacaca 241 ctctaggagg tgatcgtagt tggcatgaga gagaca //