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From: harper@csc.fi
Newsgroups: bionet.molbio.proteins
Subject: Re: rat codon frequency tables
Message-ID: <1991Mar21.172856.1@csc.fi>
Date: 21 Mar 91 17:28:56 GMT
References: <9103202154.AA20653@gcg.com> <1991Mar20.221406.26446@bronze.ucs.indiana.edu>
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In article <1991Mar20.221406.26446@bronze.ucs.indiana.edu>, gilbertd@cricket.bio.indiana.edu (Don Gilbert) writes:
Dg> In article <9103202154.AA20653@gcg.com> dkatz@GCG.COM (Don Katz - Genetics Computer Group) writes:
Dg>>> There is a tabulation in Nucleic Acids Research 14:r151-r197, 1986, which
Dg>>> includes quite a number of species.  I am not aware of any update on that
Dg>>> tabulation.
Dg>>
Dg>>Most recent tabulation is Wada et al., Codon usage tabulated from the
Dg>>GenBank genetic sequence data. NAR 18(suppl):2367-2411, 1990
Dg> 
Dg> To refresh our network memory, Mike Cherry has a more recent set of codon
Dg> tables for 50 species available in useable, electronic form.  Try anonymous
Dg> ftp to:
Dg> frodo.mgh.harvard.edu                   Codon usage tables for all major species
Dg> 132.183.190.10                          (GCG format)
Dg> ( [.codon] )
Dg> 
Dg> Contact: Mike Cherry*, cherry@frodo.mgh.harvard.edu

In Europe you can get the codon usage tables from bioftp.unibas.ch
Contact: Reinhard Doelz  at  Doelz@urz.unibas.ch

You will also find a few other interesting databases at that site.

-=ROB=-