Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!usc!wuarchive!rex!samsung!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Infectious pancreatic necrosis virus (Jasper serotype) VP1 gene, Message-ID: Date: 30 Mar 91 13:00:34 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 73 Approved: lear@genbank.bio.net Checksum: 35709 5 LOCUS IPNVP1JAS 2784 bp ds-RNA VRL 30-MAR-1991 DEFINITION Infectious pancreatic necrosis virus (Jasper serotype) VP1 gene, complete cds. ACCESSION M58756 KEYWORDS GTP-binding protein; RNA dependent RNA polymerase; VP1; viral protein 1. SOURCE Infectious pancreatic necrosis virus (Jasper serotype), cDNA to genomic RNA. ORGANISM Infectious pancreatic necrosis virus Viridae; ds-RNA nonenveloped viruses; Birnaviridae. REFERENCE 1 (bases 1 to 2784) AUTHORS Duncan,R., Mason,C.L., Nagy,E., Leong,J.-A. and Dobos,P. TITLE Sequence analysis of infectious pancreatic necrosis virus genome segment B and its encoded VP1 protein: A putative RNA-dependent RNA polymerase lacking the Gly-Asp-Asp motif JOURNAL Virology 181, 541-552 (1991) STANDARD simple staff_entry FEATURES Location/Qualifiers CDS 101..2638 /standard_name="VP1" /note="putative RNA-dependent RNA polymerase" /product="viral protein 1" /codon_start=101 BASE COUNT 860 a 813 c 688 g 423 t ORIGIN Segment B. 1 ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac gtatgcacgc 61 aagtgccctt taacaaaacc ctatacacac aactcatgat atgtcggaca tcttcaactc 121 accacaaaac aaggcatcca tcttgactgc tctgatgaag agcacaacag gagacgtaga 181 ggacgtgctg ataccaaaac gcttcaggcc agccaaggac cccctcgaca gcccgcaagc 241 agcagcacag ttcctgaagg acaacaagta ccggatactt aggccgcgag ccatcccgac 301 catggtcgaa ctagagacag atgccgctct gcctcgactg cgacaaatgg tggaagacgg 361 caagcttaag gacacggtaa gcgtcccaga aggaaccact gcgttctacc caaagtacta 421 cccattccac aagccagacc atgacgaagt ggggacgttc ggggctccgg acatcacact 481 tctgaagcaa ctcaccttct tcctgttgga gaatgacttc ccaacaggac cggagacgct 541 cagacaagtc cgagaagcca tagccacact tcagtacggc tcaggcagct actcaggaca 601 gctgaacagg ctcctagcaa tgaagggcgt cgccactggc aggaatccaa acaagactcc 661 aaaaacagtg ggctacacga acgaacagct agcaaaactg ctggagcaaa cactaccgat 721 caacacacca aagcatgagg accccgacct ccggtgggcc ccaagctggc tgatcaacta 781 caccggagac ctgagcacag acaagtcata tctgccacat gtgaccataa agtcctcagc 841 cggcctacca tacataggca aaaccaaagg agacacgacg gcagaagcgc tcgtactggc 901 tgactccttc atacgtgacc tcggaagagc cgccacatca gcagacccag aagcaggtgt 961 gaagaaaacc atcaccgact tctggtacct gagctgtggg ctgctcttcc caaagggcga 1021 aagatacaca caagtggact gggacaagaa gaccagaaac atttggagcg cgccctaccc 1081 aacacaccta ctactatcaa tggtgtcaac cccggtgatg aacgagtcca aactcaacat 1141 caccaacacc cagaccccgt ctctgtacgg gttctcacca ttccacggag gaatggacag 1201 aatcatgaca atcataagag acagcctgga caatgacgag gacctagtca tgatctatgc 1261 ggacaacatc tacatactgc aggacaacac atggtactca attgacctgg agaaaggcga 1321 ggccaactgc actccacagc acatgcaggc catgatgtac tacctcctga cgaggggatg 1381 gacgaacgag gacggctcac cgcgatacaa cccgacatgg gccacattcg caatgaacgt 1441 cgctccatcc atggtggtgg actcatcgtg tcttttgatg aaccttcaac tgaagaccta 1501 cggccagggc agtgggaatg cctttacatt cctgaacaac cacctcatgt ccacaatagt 1561 cgtggccgag tgggtaaaag cagggaaacc aaaccccatg accaaagagt tcatggacct 1621 cgaggagaaa acgggcatca acttcaagat agagcgcgag ctgaaaaacc ttagagagac 1681 catcgttgag gccgtcgaga cggcacccca ggatggatac ctcgccgatg ggtccgacct 1741 accccccatc agaccaggaa aagcagtaga gcttgacctg ctcgggtggt cggccatcta 1801 cagccgccaa atggagatgt tcgttccagt cctcgagaac gagagactaa ttgcctcagc 1861 agcctaccca aaggggctcg agaacaaagc cctggccaga aaacccggag ccgagattgc 1921 gtaccagata gtgcggtacg aggcaatcag gctggtaggc ggctggaaca atccgctact 1981 agagaccgcg gccaaacaca tgtccctcga caagaggaag agactggaag tgaaggggat 2041 agacgtcacc ggattcctcg atgactggaa caacatgtcc gaattcggag gagacctaga 2101 aggaataacg ctatcagaac ccctaacaaa ccaaacactt gttgacatca acacgccgct 2161 ggacagcttt gaccccaagg caagacccca aacacccagg tctccaaaga agactctaga 2221 cgaggtgact acggccatca cctcgggcac atacaaggac cccaaaagcg ctgtgtggcg 2281 actgctagac cagaggacca aactccgagt cagcacacta cgagatcaag cactagcgct 2341 aaaacccgcg tcgtcctcgg tggacaactg ggccgaagcc actgaggaac tggcacaaca 2401 gcaacagcta ctcatgaagg ccaacaatct gctgaagagc agcctgacgg agacaagaga 2461 agcactggag accatccagt cagacaaaat catcgcaggg aaatccaacc ccgagaagaa 2521 cccggggacc gcagccaacc cagtcgttgg ctacggggaa ttcagtgaga agattcctct 2581 gacccccacg cagaaaaaga atgccaagcg gagggaaaag cagagaagaa accagtaaga 2641 agacccaaac cgggaagaat ccgaaatgaa tcagctggac tcatatgaaa gctccgcgcc 2701 gcacggcaag ctggacaaaa gtagtgaccc gacaacgtgc caccaacatg acccctgaaa 2761 acatccggtt ccgccaggga cccc //