Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!zaphod.mps.ohio-state.edu!sdd.hp.com!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Cauliflower mosaic virus genome. Message-ID: Date: 18 May 91 12:08:42 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 173 Approved: lear@genbank.bio.net Checksum: 22240 12 LOCUS MCAMVG1 8031 bp ds-DNA VRL 18-MAY-1991 DEFINITION Cauliflower mosaic virus genome. ACCESSION V00140 KEYWORDS circular; genome. SOURCE Cauliflower mosaic virus DNA. ORGANISM Cauliflower mosaic virus Viridae; ds-DNA nonenveloped viruses; Caulimovirus. REFERENCE 1 (bases 1 to 8031) AUTHORS Gardner,R.C., Howarth,A.J., Hahn,P., Brown-Luedi,M., Shepherd,R.J. and Messing,J. TITLE The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by m13mp7 shotgun sequencing JOURNAL Nucleic Acids Res. 9, 2871-2888 (1981) STANDARD full automatic COMMENT See also entries and . From EMBL entry CAMVG1; dated 13-FEB-1991. FEATURES Location/Qualifiers CDS 364..1344 /note="reading frame I" /codon_start=364 CDS 1349..1825 /note="reading frame II" /codon_start=1349 CDS 1830..2216 /note="reading frame III" /codon_start=1830 CDS 2201..3664 /note="reading frame IV" /codon_start=2201 CDS 3633..5666 /note="reading frame V" /codon_start=3633 CDS 5554..7333 /note="reading frame VI" /codon_start=5554 BASE COUNT 2931 a 1658 c 1570 g 1872 t ORIGIN 1 ggtatcagag ccatgaatcg gtttaaaaac caaactcaag agggtaaaac ctcaccaaaa 61 tacgaaagag ttcttaactc taaagataaa agatctttca agatcaaaac tagttccctc 121 acaccggtga ccgacaggtt taccaccgta aggtttcaga acaacatcga atgcgtttac 181 gccaacttcg actctcagct caagtcgtcg tacgatggta gatctaaaaa gatcaagaat 241 ctaagcctta aaaatcttag atgttatgaa gccttcctca ggaagtacct tctggaacaa 301 taaatctctc tgagaatagt actctaacga gtatccacag gaaaaataat cttctgtgtt 361 gagatggatt tgtatccaga agaaaatacc caaagcgagc aatcgcagaa ttctgaaaat 421 aatatgcaaa tatttaagtc agaaaattcg gatggattct cctccgatct aatgatctca 481 aacgatcaat taaaaaatat ctctaagacc caattaactt tggagaaaga aaagatattt 541 aaaatgccta acgttttatc tcaagttatg aaaaaagcgt ttagcaggaa aaacgagatt 601 ctttactgcg tctcgacaaa agaattatca gtggacattc acgatgccac aggtaaggta 661 tatctccctt taatcactag agaggagata aataaaagac tttctagctt aaaacctgaa 721 gtcagaaaga tcatgtccat ggttcatctt ggagcggtca aaatattgct taaagctcaa 781 tttcgaaatg ggattgatac cccaatcaaa attgctttaa tcgatgatag aattaattct 841 agaagagatt gccttctcgg tgcagccaaa ggtaatctag catacggtaa gtttatgttt 901 actgtatacc ccaagtttgg aataagcctt aatacccaaa gacttaacca aaccttaagc 961 cttattcatg attttgagaa taaaaatctt atgaataaag gtgataaagt tatgaccata 1021 acctatatcg taggatatgc attaactaat agtcatcata gcatagatta tcaatcgaat 1081 gctacaattg aactagaaga cgtatttcaa gaaattggaa atgtccagca atctgacttt 1141 tgtacaatac aaaatgacga atgcaattgg gccattgata tagcccaaaa caaagcctta 1201 ttaggagcta aaacccaatc ccaaattggt aatagtcttc aaataggaaa cagtgcttca 1261 tcctctaata ctgaaaatga attagctagg gtaagccaaa acatagatct tttaaaaaac 1321 aaattaaaag agatctgtgg agaataaaat gagcattacg ggtcaaccgc atgtttataa 1381 aaaggatact attattagac taaaaccatt gtctcttaat agtaataata gaagttatgt 1441 ttttagttcc tcaaaaggga acattcaaaa tataattaat catcttaaca acctcaatga 1501 gattgtagga agaagcttac tcggaatatg gaagatcaac tcatacttcg gactaagcaa 1561 agacccttcg gagtccaaat caaaaaaccc gtcagttttt aatactgcaa aaaacatttt 1621 taagagtagg ggggttgatt actcgagcca actaaaggaa gtaaaatccc ttttagaagc 1681 tcaaaatact agaattaaaa atctagaaaa tgcaattcaa tccttagata ataagattga 1741 accagagccc ttaactaaag aagaagttaa agagctaaaa gaatcgatta actcgatcaa 1801 agaaggatta aagaatatta ttggctgaaa tggctaatct taatcaaatc cagaaagaag 1861 tctctgaaat cctcagtgac caaaaatcca tgaaatcgga tataaaagct atcttagaat 1921 tgctaggatc ccaaaatcct actaaagaaa gcttagaagc cgttgcagcg aaaatcgtta 1981 atgacttaac caagctcatc aatgattgtc cttgtaacaa agagatatta gaagccttag 2041 gcaatcagcc taaagagcaa ctaatagaac aacctaaaga aaaaggcaaa ggccttaatc 2101 taggaaaata tacttacccc aattacggcg taggaaatga agaattagga tcctctggaa 2161 accctaaagc tttaacttgg cctttcaaag ctccagcagg atggccgaat caattttaga 2221 caggaccatt aaccggttct ggtataacct gggagaagat tgtctctcag aaagtcaatt 2281 tgaccttatg ataaggttaa tggaagagtc ccttgacggg gaccaaatta ttgatctaac 2341 ctctctacct agtgataatt tgcaggtcga acaggttatg acaactaccg acgactcgat 2401 ctcggaagaa tcagaattcc ttctagcaat aggagaaata tctgaagacg aaagtgattc 2461 aggagaagaa cctgaattcg aacaagttcg aatggatcga acaggaggaa cggagattcc 2521 caaagaagaa gatggtgaag gaccatctag atacaatgag agaaagagaa agaccccgga 2581 ggaccggtac tttccaactc aaccaaagac catcccagga caaaagcaaa cgtctatggg 2641 aatgctcaac attgactgcc aaatcaatcg aagaacttta atcgatgatt gggcagcaga 2701 aatcggattg atagtcaaaa ccaacagaga agactatctt gatccagaaa caatactact 2761 cttgatggaa cacaaaacat caggaatagc caaggagtta atccgaaata caagatggaa 2821 ccgtactacc ggcgatatca tagaacaggt gatcaatgca atgtacacca tgttcttagg 2881 acttaactac tccgacaaca aggttgctga aaagatagac gagcaagaga aggccaagat 2941 cagaatgacc aagctccagc tcttcgacat ctgctacctt gaagaattta catgtgatta 3001 tgagaagaac atgtacaaga cggaaatggc ggatttccct ggatacatca accagtacct 3061 gtcaaaaatc cccatcatag gagaaaaagc gctaacacgc tttaggcatg aagccaacgg 3121 aaccagcatc tacagcttag gtttcgcggc aaagatagta aaagaagaac tatcaaaaat 3181 ctgcgactta tcaaagaagc agaagaagtt gaagaaattc aacaagaaat gctgcagcat 3241 cggtgaagct tcagtagaat atggaggcaa gaaaacatcc aagaagaagt atcataagcg 3301 atacaagaaa agatataagg tctataaacc ttataagaag aagaagaaat tccgatccgg 3361 aaaatacttc aagcccaaag agaagaaggg ctcaaagcga aagtattgcc caaaaggcaa 3421 gaaggactgc agatgttgga tctgcaatat cgaaggccat tacgccaacg aatgtcctaa 3481 tcgacaaagc tcggagaagg ctcacatcct tcaacaagca gagaatttgg gtctccagcc 3541 cgttgaagaa ccctatgaag gagttcaaga agtattcatc ttagaataca aagaagagga 3601 agaagaaacc tctacagaag aaagcgatga tgaatcatct acttctgaag actcagactc 3661 agattgagca ggtgatgaac gtcaccaatc ccaattcgat ctacatcaag ggaagactct 3721 acttcaaagg atacaagaag atagagcttc actgttttgt agacacggga gcaagcttat 3781 gcatagcatc caagttcgtc ataccagaag aacattgggt taatgcagaa agaccaataa 3841 tggtcaaaat agcagatgga agttcaatta ccatcagcaa agtctgcaaa gacatagact 3901 tgatcatagc cggcgagata ttcaaaattc ccaccgtcta tcagcaagaa agtggcatcg 3961 atttcataat cggcaacaac ttttgtcaac tgtatgaacc attcatacag tttacagata 4021 gagttatctt cacaaagaac aagtcctatc ctgttcatat tacgaagcta acaagagcag 4081 tgcgagtagg catcgaagga tttcttgaat caatgaagaa acgttcaaag actcagcaac 4141 ctgagccggt gaacatttcg acaaacaaga tagaaaatcc actagaagaa attgctattc 4201 tttcagaggg gaggaggtta tcagaagaaa aacttttcat cactcaacaa agaatgcaaa 4261 aaatcgaaga actactagag aaagtatgtt cagaaaatcc attagatcct aacaagacta 4321 agcaatggat gaaagcttca atcaagctca gcgacccaag caaagctatc aaggttaaac 4381 ccatgaaata cagcccaatg gatcgtgaag aatttgacaa gcaaatcaaa gagttactgg 4441 accttaaagt cattaaaccc agtaaaagcc ctcacatggc accagccttc ttggtcaaca 4501 atgaagccga gaagcgaaga ggaaagaaac gtatggtagt caactacaaa gctatgaaca 4561 aagccaccat aggagacgca tacaatcttc ccaacaaaga cgagttactt acactcattc 4621 gaggaaagaa gatcttttct tccttcgact gtaagtccgg attctggcaa gttctacttg 4681 atcaagaatc aagacctcta acggcattca catgtccaca aggtcactac gaatggaatg 4741 tggtcccttt cggcctaaag caggcaccat ccatattcca gagacacatg gacgaagcat 4801 ttcgtgtgtt cagaaaattc tgttgcgtgt atgtcgacga catcctcgta ttcagtaaca 4861 acgaagaaga tcacctactt cacgtagcaa tgatcttaca aaagtgcaat caacatggaa 4921 tcattctttc caagaagaaa gcacaactct tcaagaagaa gataaacttc cttggtctag 4981 aaatagatga aggaacacac aagcctcaag gacatatctt ggaacatatc aacaaattcc 5041 cagataccct tgaagacaag aagcaacttc agagattctt aggcatccta acatatgcct 5101 ctgattatat cccgaagcta gctcaaatca gaaagcctct gcaagccaag cttaaagaaa 5161 atgttccatg gaaatggaca aaggaggaca ccctctacat gcaaaaggtg aagaaaaatc 5221 tgcaaggatt tcctccacta catcatccct taccagagga aaagctgatc atcgagaccg 5281 acgcatcaga cgactactgg ggaggtatgt taaaagctat caaaattaac gaaggtacta 5341 ataccgagtt aatttgcaga tacgcatctg gaagctttaa agctgcagaa aggaattacc 5401 acagcaatga caaagagaca ttggcggtaa taaatactat aaagaaattc agtatttatc 5461 taactcctgt tcattttctg attaggacag ataatactca tttcaagagt tttgttaacc 5521 ttaattacaa aggagattca aaacttggaa gaaacatcag atggcaagca tggcttagcc 5581 actattcgtt tgatgttgaa catattaaag gaaccgacaa ccactttgcg gacttccttt 5641 caagagaatt caataaggtt aattcctaat tgaaatccga agataagatt cccacacact 5701 tgtggctgat atcaaaaagg ctactaccta tataaacaca tctctggaga ctgagaaaat 5761 cagacctcca agcatggaga acatagaaaa actcctcatg caagagaaaa tactaatgct 5821 agagctcgat ctagtaagag caaaaataag cttagcaaga gctaacggct cttcgcaaca 5881 aggagacctc cctctccacc gtgaaacacc ggtaaaagaa gaagcagttc attctgcact 5941 ggccactttt acgccaactc aagtaaaggc tattccagag caaacggctc ctggtaaaga 6001 atcaacaaat ccgttgatgg ctagtatctt gccaaaagat atgaacccag ttcaaactgg 6061 gataaggctt gcagtgccag gggacttttt acgtcctcat cagggaattc caatcccaca 6121 aaaatctgag cttagcagca tagttgctcc tctcagagca gaatcgggta ttcaccaccc 6181 tcatatcaac tactacgttg tgtataacgg tccacacgcc ggtatatacg atgactgggg 6241 ttgtacaaag gcggcaacaa acggcgttcc cggagttgca tacaagaagt ttgccactat 6301 tacagaggca agagcagcag ctgacgcgta cacaacaagt cagcaaacag acaggttgaa 6361 cttcatcccc aaaggagaag ctcaactcaa gcccaagagc tttgcgaagg ccttaaccag 6421 cccaccaaag caaaaagccc actggctcac gctaggaacc aaaaggccca gcagtgatcc 6481 agccccaaaa gagatctcct ttgccccgga gatcaccatg gacgactttc tctatctcta 6541 cgatctagga agaaagttcg acggagaagg tgacgatacc atgttcacca ccgataatga 6601 gaagattagc ctcttcaatt tcagaaagaa tgctgaccca cagatggtta gagaggccta 6661 cgcggcaggt ctcatcaaga cgatctaccc gagtaataat ctccaggaga tcaaatacct 6721 tcccaagaag gttaaagatg cagtcaaaag attcaggact aactgcatca agaacacaga 6781 gaaagatata tttctcaaga tcagaagtac tattccagta tggacgattc aaggcttgct 6841 tcataaacca aggcaagtaa tagagattgg agtctctaag aaagtagttc ctactgaatc 6901 aaaggccatg gagtcaaaaa ttcagatcga ggatctaaca gaactcgccg tgaagactgg 6961 cgaacagttc atacagagtc ttttacgact caatgacaag aagaaaatct tcgtcaacat 7021 ggtggagcac gacactctcg tctactccaa gaatatcaaa gatacagtct cagaagacca 7081 aagggctatt gagacttttc aacaaagggt aatatcggga aacctcctcg gattccattg 7141 cccagctatc tgtcacttca tcaaaaggac agtagaaaag gaaggtggca cctacaaatg 7201 ccatcattgc gataaaggaa aggctatcgt tcaagatgcc tctgccgaca gtggtcccaa 7261 agatggaccc ccacccacga ggagcatcgt ggaaaaagaa gacgttccaa ccacgtcttc 7321 aaagcaagtg gattgatgtg atatctccac tgacgtaagg gatgacgcac aatcccacta 7381 tccttcgcaa gacccttcct ctatataagg aagttcattt catttggaga ggacacgctg 7441 aaatcaccag tctctctcta caaatctatc tctctctatt ttctccataa taatgtgtga 7501 gtagttccca gataagggaa ttagggttct tatagggttt cgctcacgtg ttgagcatat 7561 aagaaaccct tagtatgtat ttgtatttgt aaaatacttc tatcaataaa atttctaatt 7621 cctaaaacca aaatccagta ctaaaatcca gatcacctaa agtccctata gatctttgtc 7681 gtgaatataa accagacatg agacgactaa acctggagcc cagacgccgt tcgaagctag 7741 aagtaccgct taggcaggag gccgttaggg aaaagatgct aaggcagggt tggttacgtt 7801 gactcccccg taggtttggt ttaaatatga taaagtggac ggaaggaagg aggaagacaa 7861 ggaaggataa ggttgcaggc cctgtgcaag gtaagaagat ggaaatttga tagaggtacg 7921 ttactatacc tatactatac gctaagggat gcttgtattt taccctatac cccctaataa 7981 ccccttatcg attttaagaa ataatccgca taagcccccg cttaaaaaat t //