Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!zaphod.mps.ohio-state.edu!think.com!spool.mu.edu!snorkelwacker.mit.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Caenorhabditis briggsae TCb1(#5) repetitive element Message-ID: Date: 18 May 91 12:10:37 GMT Article-I.D.: genbank.May.18.05.10.36.1991.25449 Sender: root@genbank.bio.net Distribution: bionet Lines: 51 Approved: lear@genbank.bio.net Checksum: 52705 3 LOCUS CELTCB15 989 bp ds-DNA INV 18-MAY-1991 DEFINITION Caenorhabditis briggsae TCb1(#5) repetitive element ACCESSION X54217 KEYWORDS inverted repeat. SOURCE Caenorhabditis briggsae DNA. ORGANISM Caenorhabditis briggsae Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Filariidae. REFERENCE 1 (bases 1 to 989) AUTHORS Harris,L.J., Prasad,S. and Rose,A.M. TITLE Isolation and sequence analysis of caenorhabditis briggsae repetitive elements related to the caenorhabditis elegans transposon Tc1 JOURNAL J. Mol. Evol. 30, 359-369 (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 989) AUTHORS Harris,L.J. JOURNAL Unpublished (1991) STANDARD full automatic COMMENT For TCb1#10 see CBTCB110; From EMBL 26 entry CBTCB15; dated 23-JAN-1991. FEATURES Location/Qualifiers repeat_unit 1..80 /rpt_type=inverted misc_feature 530..530 /note="position equivalent to Tcl ORF1 start site" misc_feature 812..>989 /note="put. 627bp internal deletion from progenitor" repeat_unit 910..989 /rpt_type=inverted BASE COUNT 314 a 180 c 185 g 310 t ORIGIN 1 cagtactggc cataaagaat gcgacaactt gttttttgac gataactttt tgaaaactca 61 acttttcaac tcgaattttt tactgtagac acattggaaa gttacgaaaa cttgcgtact 121 tggaaattgc atcatcttgc aaacaaaatt ttttttcaat tgttttcatt ttttttttca 181 ttttgcatat ttttcatgat ttttggtttt tttaaataaa gttgaaagac aactaattgg 241 aattagtttt agttgattat tttattgttt ttcagatatg gttagaccat tcggaaaaaa 301 tccttctctg tggacgagcg aaaaagcatt gtgcgtggtc atgaactcgg cgcgcatccg 361 aagatacttg caactcagtt tagttgttct tccagccaaa tttaccgtat tctgaagaaa 421 aatcgagatg atgtgaggtt tcaatcagct ttctcaacta aatttaacaa tttagaatgg 481 cgttgttcat cgccaatctc caggaagacc ccgaaccact tccagaaata tggatcggaa 541 cattttgcgc gcatgccgag aagatcctag acgcacatct acgggtattc aactttctgt 601 gacgtctcca aatgaaccgg taccatcgag aagaactatt agaagacgtt tgcaagttgc 661 tggactgcac ggacgaagac cagtcaaaaa accactcgtc agtttgaaaa accgaaaagc 721 tcgcgttgaa tgggctaaac agcacttgtc ctggggcccc cgtgagtggg caaatcacat 781 ctggagcgat gaatcgaagt tcaatatgtt cgtgaatttt cgaaaaaaat taattttcaa 841 aaaaattgta gcagaatatt aaaaccaact tagcctaaaa gtttttgata gtgctgaaaa 901 aatcttacca aaaattcgga ttgaaaagtt gagttttcaa aaagttatct tcaaaaaaca 961 agttgtcgca ttctttatgg ccagtactg //