Path: utzoo!utgpu!news-server.csri.toronto.edu!bonnie.concordia.ca!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Xiphophorus maculatus Xmrk oncogene DNA (Y-chromosomal copy) Message-ID: Date: 22 May 91 12:09:27 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 192 Approved: lear@genbank.bio.net Checksum: 19702 11 LOCUS XIPRKY 5579 bp ss-mRNA VRT 22-MAY-1991 DEFINITION Xiphophorus maculatus Xmrk oncogene DNA (Y-chromosomal copy) ACCESSION X56319 KEYWORDS Tyrosine kinase; Xmrk oncogene. SOURCE Xiphophorus maculatus RNA. ORGANISM Xiphophorus maculatus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes; Actinopterygii; Atheriniformes; Cyprinodontoidei; Poeciliidae. REFERENCE 1 (bases 1 to 5579) AUTHORS Adam,D. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 5579) AUTHORS Adam,D., Maeueler,W. and Schartl,M. TITLE Transcriptional activation of the melanoma inducing Xmrk oncogene in Xiphophorus JOURNAL Oncogene 6, 73-80 (1991) STANDARD full automatic COMMENT From EMBL 26 entry XMRKY; dated 11-MAR-1991. FEATURES Location/Qualifiers mRNA join(77..232,321..396,1322..1468,1551..1648,1860..1997, 3516..3606,3764..5579) /gene="Xmrk (Y-chromosomal copy)" CDS join(77..232,321..396,1322..1468,1551..1648,1860..1997, 3516..3606,3764..4098) /partial /product="Xmrk protein (Y-chromosomal)" /gene="Xmrk (Y-chromosomal copy)" /codon_start=77 exon 77..232 /number=1 /gene="Xmrk (Y-chromosomal copy)" exon 77..232 /gene="Xmrk (Y-chromosomal copy)" exon 77..232 /note="exon t" /gene="Xmrk (Y-chromosomal copy)" intron 233..320 /number=1 exon 321..396 /number=2 /gene="Xmrk (Y-chromosomal copy)" exon 321..396 /gene="Xmrk (Y-chromosomal copy)" exon 321..396 /note="exon u" /gene="Xmrk (Y-chromosomal copy)" intron 397..1321 /number=2 exon 1322..1468 /number=3 /gene="Xmrk (Y-chromosomal copy)" exon 1322..1468 /gene="Xmrk (Y-chromosomal copy)" exon 1322..1468 /note="exon v" /gene="Xmrk (Y-chromosomal copy)" intron 1469..1550 /number=3 exon 1551..1648 /number=4 /gene="Xmrk (Y-chromosomal copy)" exon 1551..1648 /gene="Xmrk (Y-chromosomal copy)" exon 1551..1648 /note="exon w" /gene="Xmrk (Y-chromosomal copy)" intron 1649..1859 /number=4 exon 1860..1997 /number=5 /gene="Xmrk (Y-chromosomal copy)" exon 1860..1997 /gene="Xmrk (Y-chromosomal copy)" exon 1860..1997 /note="exon x" /gene="Xmrk (Y-chromosomal copy)" intron 1998..3515 /number=5 exon 3516..3606 /number=6 /gene="Xmrk (Y-chromosomal copy)" exon 3516..3606 /gene="Xmrk (Y-chromosomal copy)" exon 3516..3606 /note="exon y" /gene="Xmrk (Y-chromosomal copy)" intron 3607..3763 /number=6 exon 3764..5579 /number=7 /gene="Xmrk (Y-chromosomal copy)" exon 3764..5579 /note="exon z" /gene="Xmrk (Y-chromosomal copy)" polyA_signal 5574..5579 BASE COUNT 1582 a 1199 c 1130 g 1668 t ORIGIN 1 gaattcaaat atttatttat ctatttagcg gttagttctg gtttgttaaa tgacacactg 61 tgtcctgctg gttcagggga tgaactacct ggaagagcgc cacctggtgc accgcgacct 121 ggcagccagg aacgtcctgc tgaaaaaccc gaaccacgtc aagatcacag acttcggtct 181 gtccaagctg ctgacggctg acgagaagga ataccaagcc gacggaggaa aggtgccatg 241 gcaatgcctg actggtttct gtttgctctt cggactgaaa acatgtcaga gatgaatcac 301 tgctgcatct ctgtgagcag gttcccatta agtggatggc tttggagtcg atcctccagt 361 ggacctacac ccatcagagc gacgtgtgga gctacggtga ggaatcgtcc ccacagcgcc 421 acctacctgc cttcaccctc tgcttcctgt tagccggttt aaacatctga aaccgcacag 481 ccagaggatt tagactgaat aaaatacttc tacactatta gtgaatattg gttgcacatt 541 atcatctctt gttcaaaatg ttaaatgctt gagactcaaa ccagagtgag atttttgtac 601 actgaacaga tgctgaacat cagtgttagc atgtaaccct gattatattg atttattcct 661 gattatattt aatctgatca tggaaatctt accagttttc ctgtttgaaa ttagaatgag 721 tgatttgtat tactaaaaat taaaacttag ggctcttagt ttagctaaaa tcccatctta 781 cgttgaaagg acgtggcgtt catttatgga gctccagtag cagtcagtca agccacaaat 841 ctgaagaagc ctctgactgg agactgttgc agcttaacag ctccacatcc aggcaccaga 901 aacattagta acatagcaac acatcctgga tgactccatc cgttagcata ctctgctaat 961 ccgcctcatt tgcttttgct gctcgtcttt aaacctctgg ttggctgtga ggtcagaaag 1021 atgttggagt aggggatatg atcgatggaa cttgaacttc ttccttctct ctctgctctg 1081 catccatgaa gcctcctttc tacctcatct gggatttggg gtcaaagttc aggtgatatt 1141 ttatctacct gaggtccaca aatcaggtag acgagtccgt tgacaggaca gctacgagtc 1201 attctaacta taaatggcta agtgtgttcc tgcagaaaat gagaaaattg ttctttttcc 1261 ttttgtgcgg tgttattgct aggctaggct aaccaagcta aagtcactcc tgtctctgca 1321 ggtgtgacgg tttgggagtt gatgacattc ggatccaaac catacgacgg catcccggcc 1381 aaggagatcg cctcggtgct ggagaacggg gagcggctgc cgcagcctcc catctgcacc 1441 atcgaagtct acatgatcat cctgaagtgt aagagctgac cctgcaggtg gcgctgcagg 1501 ctggctgggc tgtttcctca tggtagtgtg ttgtccccgt ctccctgcag gctggatgat 1561 cgacccgtcc agcagaccca ggttcagaga gctggtgggc gagttctccc agatggcccg 1621 ggacccgtcc aggtacctgg tcatacaggt acgccactgc ccccacctga ccctactata 1681 aaacactaac agaacaattc tgggttttca ctttatgttt cagaaaatat atccaaagag 1741 ttcaaatcaa aatctaaatg tttttcatta agtaactgaa cattaaaaag cgaatctaat 1801 caaatatgga ataataaagt atatttgact gttttggttg cctctgactt gtttcccagg 1861 gcaacctgcc gagtctgtct gatcggaggc ttttctcccg cctgctgagc tctgatgacg 1921 acgtggtcga cgccgatgaa tacctgctgc catacaaacg gataaaccgc cagggcagcg 1981 agccctgcat cccgccggta aaaactctga tgctaaccga acagcaacct gaaacaagtc 2041 ctggagtttc tggagttttc attctgacct ggaaagtccg aggttcctca ccggctgggt 2101 ctcagaatcc aacatggctg ccgctcatac agacagctgt caagattttc atttgaattt 2161 gtgtctcaat aatctgatcc ttataaaacc ataagaccag ctaataaaac tgttgccaca 2221 aaattaaatt acataaatca ggatttctga gtagtctggg aaaatctgga ctttaacttc 2281 agtaactttc caggtctgga tcagcaaaaa caactaaagt gtggaggatg ttgtatttgt 2341 aactgctttt ccatttggcc atgtttcatg ttcttccttc tttcctgttc cttcttagta 2401 tacttccttg tgtccttcaa tccttcattg tcttcatgtc tcattgaata agggaaacga 2461 gaaactttta tttatttatt cctttgtccg tcattctttc atttgtactt ttgttttttc 2521 cttccttcct tcttctcctg tccttcctac cttccttaat tacttttctt gttccttctt 2581 tcaattcttt tcattgtctc ttgtttttgc agcttagata tttaaaacat tccatttatt 2641 cacatattta ccataaattt atcaacattt ggtgttttat attttaactg gttttcaaat 2701 ttacaatata gttggtgttg ggattttagc cgtagacagt aaagaagctc tctcacctga 2761 tgagtgtaga gcagtgaatc cgtctctcct taaagacatt tcccagttct tcctcacatc 2821 gtgtctttat gaaaccttca aaataaaaac agaagatttg gtgtcttact tctgtgaaag 2881 aatgacatat aaataatatt ctttgccact tgtgtaatat ttgctttgga ttgttataac 2941 acataatatt agaataatat atttataatt ataaataaaa ttgttttatt tctaagatag 3001 cgctcttgtg tcaaataatt tcaatcaacg ttagggaata attcaaactt tttgaaaatt 3061 tacaaaatct cagttatcct tcatagcgtg gactgaacac cggtgttaca tcaagcacta 3121 aagctaatat tagctggcat ttcatggtgg acataaatac aataaaaata ttctaattat 3181 aaaatataaa caataatatg ttcatcttac ttgtgaaacg ttatcccctg agatctcatg 3241 gaaatagtcc gtcgatctca acaaaaatat ccggcagtgc tgagtcttct tctgctgttt 3301 tggtttagcc aagtaggagg aacgacggct ccaagatggc cgccgtattt cctgtgcagc 3361 caatgcgggg tttactcttt actatgtcta tgatgttaac acacatgtcc tgctactgcc 3421 aaccaccagg gggcagaaca atacgtaaag tgaaataatg ggcatgtttt atccaacatg 3481 gacactgatc catctgaact gtgtgtgttt tttagaatgg acatccagtg agagagaaca 3541 gcatcactct ccggaacatc tccgacccga cccagaacgc gctggagaaa gacctggatg 3601 gtcacggtag gttctgacca gcaatcactt tcttcaagaa atcaggaagt gatcacaata 3661 atggagtcaa acagacagga tacgagtcag atgcaaacaa ggagtttcac catagcaacc 3721 gagtccaggc tctaaataaa tcttcctgat gtttgtgttc cagagtacgt taaccagcct 3781 gggagtgaaa ccagcagcag gctgtcggat atctacaatc ccaactacga ggacctgaca 3841 gacggctggg gccccgtgtc gctgtcctcc caggaggcgg agaccaactt cgccagacca 3901 gagtacctga acaccaacca aaactcgctc cccctggtgt ccagtggcag catggacgac 3961 cccgactacc aggccggcta ccaggctgcc ttcctaccgc agactggagc gctcactggg 4021 aacggcatgt tcctccctgc agcagagaac ctggagtacc tgggacaggg aggcgcactg 4081 tacactcctg tccgctaggg ggcagcagcg ctccgactga agctgtggct ttgctcagat 4141 aaacggtggt ctgttttaaa ttggacagat aactggattt aactcagatg gttcactgtc 4201 ggttctccag aggaactgaa acagaacaag aacttcctgt tccttcaggc aaaggtccaa 4261 tctttggctc taagctgacg ggatgaacgc atctggaaaa tgaacattac ccagataaac 4321 tgtaaaaaca taagctaatt caggttacat taaaaaagac tcgctcaact ctcctgctct 4381 cacatgtggg tttggatgct gcaggacgat gcagatgttt taatcctggg cgcttctgtt 4441 tccaacattt acattcatga actgaaaaca tttaagtttt ctgaagatat gatttgactg 4501 tcagtcaaca tgatgtatgc aaccttaaat ctttcagaat aagagaaaac aggtgaaact 4561 ggattctcag gccacactgc tctactccag atatttataa ctgccatttt gtaataaaaa 4621 aaagaatctg cattcacaca atctgttggt tttctatcag aacaatttta tacaagcctt 4681 gcaagagcag gtggaaataa aattaagctt actaaaattg aaattttgta gaagacaacg 4741 ttgggtgaac gaaataacac aaatggttcc gttttatagg ttgtagaagg acagaggagg 4801 acatgtccac catgtttttt aatcctcttt ggacatcacg ttcccacaga tacatcagtg 4861 tttttaaaaa tctcaccaaa atctgtgtgc atgtcgacag gagacgtgga gatgaagtgg 4921 aaaaatttta attttactaa acatcagagt tggtggggag atttgaagag tttactaatt 4981 ttttaaagat tattcagtaa tctggaataa ggaacgcaat tcagctaaac ttcacggaac 5041 catttcagtc caaactgtag cacaaggaga acctcctgtt gttgtctgac ttgaaatatt 5101 cactcttgat tgtttgtgtt gttgaatttt tgaaagaaag tttgctttac ttgacacaaa 5161 tgagccaaac cctgacgtcc tgctgctgaa tattactgct agtctctgtt tgtctttaat 5221 gtttattgat taaaaaaaaa caaagtgaag tttctgactg tggttgctgg tttttatact 5281 tagtatctat aagatactat atatatatat atatatatat atatatatat atatatatat 5341 atatatatat atatatatat aaaaacacta aaggtttaca taacattatg gtgaacacat 5401 aaatgattta atttaccttt gagttctttc tgaagtttca catccagctt aaatcctgtg 5461 tcgttgttga agcttttaag gacgtatgaa taattctata agcattatta atattaatag 5521 ctctgcagcg actgctaaca tgttgcctgc acaccggaag tgtctatgtg actaataaa //