Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!sdd.hp.com!wuarchive!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Barley Amy gene for alpha amylase (clone gRAmy56) (EC 3.2.1.1) Message-ID: Date: 22 May 91 12:16:36 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 86 Approved: lear@genbank.bio.net Checksum: 13375 5 LOCUS BLYAMY56 2203 bp ds-DNA PLN 22-MAY-1991 DEFINITION Barley Amy gene for alpha amylase (clone gRAmy56) (EC 3.2.1.1) ACCESSION X15227 KEYWORDS amylase-alpha. SOURCE Hordeum vulgare DNA. ORGANISM Hordeum vulgare Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae. REFERENCE 1 (bases 1 to 2203) AUTHORS Rahmatullah,R.J., Huang,J.K., Clark,K.L., Reeck,G.R., Chandra,G.R. and Muthukrishnan,S. TITLE Nucleotide and predicted amino acid sequences of two different genes for high-pI alpha-amylases from barley JOURNAL Plant Mol. Biol. 12, 119-121 (1989) STANDARD full automatic COMMENT SWISS-PROT; P04750; AMY6$HORVU. *source: library=lambda Charon 35; developmental stage=embryo From EMBL 26 entry HVAMY56; dated 19-MAR-1991. FEATURES Location/Qualifiers promoter 413..420 /note="TATA-box" precursor_RNA 443..>2001 /note="gRAmy56 transcript" mRNA 443..591 /note="exon 1" CDS 505..591 /note="alpha-amylase" /codon_start=505 intron 592..692 /note="intron I" mRNA 693..1643 /note="exon 2" CDS 693..1643 /note="alpha amylase" /codon_start=693 intron 1644..1749 /note="intron II" mRNA 1750..>2001 /note="exon 3" CDS 1750..1999 /note="alpha amylase" /codon_start=1750 misc_feature 2121..2126 /note="put. polyA signal" BASE COUNT 510 a 653 c 587 g 453 t ORIGIN 1 aaactaaaca acgggcaaat atgtccgttt accgctcaaa aaacgcacct catccttcaa 61 gttaatcaag aaaatttgcc aagaattttc tgaacccgga tttctgcttt gttaacctga 121 aatgcggcaa gtaaccctca gttgcctgca gatcttacgg tgcaacagga taactgacag 181 gaaatgtctg agttctgagg gaattctgaa gttcaggagg ataactgaca gtcgtactgg 241 ccggtgcctt cttgtcgaag gctggatcca tcagtcgcct tttgagctca ccgcaccggc 301 cgataacaaa ctccggccga catatccatc gatgtaccgg cccaacggag cattgaagcc 361 gaacacaccg gaatatgttc tgcaagttgc ccaccggcat gctccagcac actatatata 421 cctggccaga cacaccagct gaatccatca gttctccgtc ctcatcttcc agagcacagc 481 tagctagagc tagagctcaa gatcatggcg aacaaacaca tgtccctttc tctcttcatc 541 gtcctccttg gcctctcgtg cagcttggcc tccgggcaag tcctgtttca ggtaagaata 601 cgatcttgat catcttgtcc gtcggcaagc gcgtgtccgc tcctgggttt tgtacgtact 661 cactgagctt tgggttctgc tgcgttcgac agggttttaa ctgggagtcg tggaagcaca 721 atggcgggtg gtacaacttc ctgatgggca aggtggacga catcgccgcc gctggcgtca 781 cgcacgtgtg gctccccccg gcgtcgcagt ccgtcgccga gcaagggtac atgccgggcc 841 ggctctacga cctggacgcc tccaagtacg gcaacaaggc gcagctcaag tccctcatcg 901 gcgcgctcca cggcaaggcc gtcaaggcca tcgccgacat cgtcatcaac caccgcacgg 961 cggagcgcaa ggacggccgg ggcatctact gcatcttcga gggcggcacc ccggacgcgc 1021 gcctcgactg gggcccccac atgatctgcc gcgacgaccg gccctaccct gacggcaccg 1081 gcaaccggcc aacccggaca cgcgccgact tcggggccgc gccggacatc gaccacctca 1141 acccgcgcgt ccagaaggag ctcgtcgagt ggctcaactg gctcaggacc gacgatggct 1201 tcgacggctg gcgcttcgac ttcgccaagg gctactccgc ggacgtggcc aagatctacg 1261 tcgaccgctc cgagcccagc ttcgccgtcg ccgagatatg gacgtcgctg gcgtacggcg 1321 gggacggcaa gccgaacctc aaccaggacc cgcaccggca ggagctggtg aactgggtga 1381 acaaggtggg cggctccggc cccgccacca cgttcgactt caccaccaag ggcatcctca 1441 acgtggccgt ggagggcgag ctgtggcggc tgcgcggcac cgacggcaag gcgccgggca 1501 tgatcgggtg gtggccggcc aaggcggtga cctttgtcga caaccacgac accggctcca 1561 cgcagcacat gtggcccttc ccttccgaca gggtcatgca gggatatgcc tacatcctca 1621 cgcacccagg gaacccatgc atcgtgagcg tcatcctacc aatacatcat atcaaaatct 1681 tctgttgttt tttccgttca taacaagaaa tcatgaccga actgatggaa aataattgtg 1741 attcttcagt tctacgatca tttcttcgac tggggcttga aggaggagat cgatcgtctg 1801 gtgtcaatca ggacccgaca ggggatacac agtgagagca agctgcagat catggaggcc 1861 gacgccgacc tttaccttgc cgagatcgag ggcaaggtca tcgtcaagct cgggccaaga 1921 tacgatgtcg gacacctcat tcctgaaggc ttcaaggtgg tcgcgcatgg caatgactat 1981 gccgtatggg agaaagtata aagcaaaatt aacggagcgg ctctacaaat tagtccgagc 2041 tcgtgttgtc cacatagtac gattttagta cttcctccat gtaaaaaagg aggatgaggg 2101 acatccattg tatttttcat aaataataca ataatcaata agcttttcgc tacccatggt 2161 ttagtcgatg ttcgtttacc acaaaagtgt aactcgcaag ctt //