Path: utzoo!utgpu!news-server.csri.toronto.edu!bonnie.concordia.ca!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Barley Amy gene for alpha amylase (clone gRAmy152) (EC 3.2.1.1) Message-ID: Date: 22 May 91 12:16:34 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 93 Approved: lear@genbank.bio.net Checksum: 28102 6 LOCUS BLYAMY152 2625 bp ds-DNA PLN 22-MAY-1991 DEFINITION Barley Amy gene for alpha amylase (clone gRAmy152) (EC 3.2.1.1) ACCESSION X15226 KEYWORDS amylase-alpha. SOURCE Hordeum vulgare DNA. ORGANISM Hordeum vulgare Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae. REFERENCE 1 (bases 1 to 2625) AUTHORS Rahmatullah,R.J., Huang,J.K., Clark,K.L., Reeck,G.R., Chandra,G.R. and Muthukrishnan,S. TITLE Nucleotide and predicted amino acid sequences of two different genes for high-pI alpha-amylases from barley JOURNAL Plant Mol. Biol. 12, 119-121 (1989) STANDARD full automatic COMMENT SWISS-PROT; P04063; AMY2$HORVU. *source: library=lambda Charon 35; developmental stage=embryo From EMBL 26 entry HVAMY152; dated 19-MAR-1991. FEATURES Location/Qualifiers promoter 620..627 /note="TATA-box" precursor_RNA 650..>2159 /note="gRAmy152 transcript" mRNA 650..792 /note="exon 1" CDS 706..792 /note="alpha-amylase" /codon_start=706 intron 793..860 /note="intron I" mRNA 861..1805 /note="exon 2" CDS 861..1805 /note="alpha amylase" /codon_start=861 intron 1806..1907 /note="intron II" mRNA 1908..>2159 /note="exon 3" CDS 1908..2156 /note="alpha amylase" /codon_start=1908 misc_feature 2293..2298 /note="put. polyA signal" BASE COUNT 678 a 700 c 651 g 596 t ORIGIN 1 ttcacacatt caaaaaaagc aaatttcaaa atttgtactc gaatttaaaa aaagatcatt 61 gatttaaaaa atttcgctaa gtaaaaaact gtccacgtat ttcaaaaaaa gataagtggg 121 catcaatcgg caaaatttga tatgtcaggg tattgagcca tattaatttg gttgtggcac 181 aatatttttg tcccccgttg caacgcacgg ttatttttgt tagtgtgttc ttatggatat 241 atacgcccat aaagtttaag caatacaaca actatttcac caatccctct attctctttc 301 ttcacagcag atagaaggtt ttgtaattgt aaccacagca cactattcga tgaaaaatgc 361 atcgaatgtt ctgtcctcag aaaaacagag gttgaggata actgacggtc gtattgatcc 421 ggtgccttct tatggaaggc caaggctgcc tccatctaca tcacttggga cattgaatcg 481 ccttttgagc tcaccgtacc ggccgataac aaactccggc tgacatatcc actggcccaa 541 aggagcattg aagccgagca cacgagaaag tgatttgcaa gttgcacacc ggcagcaatt 601 ccggcatgct gcagcacact ataaatacct ggccagacac acaagttgaa tgcatcagtt 661 ctccatcgta ctcttcgaga gcacagcaag agagagctga agaacatggc gaacaaacat 721 ttgtccctct ccctcttcct cgtcctcctt ggcctgtcgg ccagcttggc ctccgggcaa 781 gtcctctttc aggtaagatc ttgtcctatc ttcagattct gtatgtaccg cggtcatgtt 841 ttgggttctg catgcgacag ggcttcaact gggagtcgtg gaagcacaat ggcgggtggt 901 acaacttcct gatgggcaag gtggacgaca tcgccgccgc cggcatcacg cacgtctggc 961 tccctccggc gtcgcagtcc gtcgccgagc aagggtacat gccgggccgg ctgtacgacc 1021 tggacgcctc caagtacggc aacaaggcgc agctcaagtc cctcatcggg gcgctccacg 1081 gcaagggcgt caaggccatc gccgacatcg tcatcaacca ccgcacggcg gagcacaagg 1141 acggccgggg catctactgc atcttcgagg gcgacacccc cgacgcccgc ctcgactggg 1201 ggccccacat gatctgccgc gacgaccggc cctacgctga cggcaccggc aacccggaca 1261 ccggcgccga cttcggggcc gcccccgaca tcgaccacct caacctgcgc gtccagaagg 1321 agctcgtcga gtggctcaac tggctcaagg ccgacatcgg cttcgacggc tggcgcttcg 1381 acttcgccaa gggctactcc gcggacgtcg ccaagattta cattgaccgc tcggagccca 1441 gcttcgccgt ggccgagata tggacgtcgc tcgcgtacgg cggggacggc aagcccaacc 1501 tcaaccagga ccagcaccgg caggagctgg tgaactgggt ggacaaggtt ggcggcaaag 1561 ggcccgctac cacgttcgac ttcaccacca agggcatcct caacgtggcc gtggagggcg 1621 agctgtggcg gctgcgcggc acagacggta aggcgccagg catgatcggg tggtggccgg 1681 ccaaggcggt gacctttgtg gacaaccacg acaccggctc cacgcagcac atgtggccct 1741 tcccttctga cagggtcatg cagggatatg cctacatcct cacgcaccca gggacgccat 1801 gcatcgtgag ttcgtctacc aatacatcac atctcaattt tcttttcttg tttcttcata 1861 ataataacaa acatgaccga aatgatgaaa aataatttgg ttctcagttc tacgatcatt 1921 tcttcgactg gggcctgaag gaggagatcg atcgcttggt gtcagtcagg acccggcacg 1981 ggatacacaa cgagagcaag ctgcaaatca tagaggccga cgccgacctt tatctcgccg 2041 agatcgacgg caaggtcatc gtcaagctcg ggccaagata cgatgtgggg aacctcattc 2101 cgggaggctt caaggtggcc gcgcacggca atgactatgc cgtatggcag aaaatatgag 2161 caaaattgcg agagcagctc tacaagttcc tatatgatac atattagtcc gagctaacgc 2221 gttcacatag tacaatttaa tacttcctcc atgtaaaagt gaggatgagg gacatgcatt 2281 gtatttttga taaaataatg atttataaga tttgattttc gcacctcttt ctttctttaa 2341 taagacaaca aaatgagcat cttagatcag attaatatcg aggaaaataa aatccactac 2401 aatggataga taaccaaaag ataaaattac aataaaacgc ataccggtct ttttctttct 2461 ctgattttcg gcactcttgg tttaccattg ttagttgaac gaaaactggg caaccatgac 2521 cagtaactcg tacgggagca tacggaattg tgtcacgggg ctgagctgag gcgcacaaaa 2581 gcaatggcgg ggtttcctct ttttggccca gagtcgttgg agctc //