Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!sdd.hp.com!wuarchive!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Hepatitis C virus (HCV) genomic RNA for a putative envelope (E1) Message-ID: Date: 22 May 91 12:18:08 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 41 Approved: lear@genbank.bio.net Checksum: 18812 3 LOCUS HPCVEC10 414 bp ss-mRNA VRL 22-MAY-1991 DEFINITION Hepatitis C virus (HCV) genomic RNA for a putative envelope (E1) protein and E1-NS1/E2 protein junction (isolate EC10), partial cds. ACCESSION X53136 KEYWORDS NS1 protein; envelope protein; hepatitis; nonstructural protein. SOURCE Hepatitis C virus RNA. ORGANISM Hepatitis C virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Togaviridae incertae sedis. REFERENCE 1 (bases 1 to 414) AUTHORS Weiner,A.J. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 414) AUTHORS Weiner,A.J., Brauer,M.J., Rosenblatt,J., Richman,K.H., Tung,J., Crawford,K., Bonino,F., Saracco,G., Choo,Q.L., Houghton,M. and Han,J.H. TITLE Variable and hypervariable domains found in the regions of HCV corresponding to the flavivirius envelope and NS1 proteins and the pestivirus envelope glycoproteins JOURNAL Virology 180, 842-848 (1991) STANDARD full automatic COMMENT See X53131 to X53136 for the putative envelope sequence of other HCV isolates. From EMBL 26 entry HCVEC10; dated 27-MAR-1991. FEATURES Location/Qualifiers CDS <1..>414 /note="putative envelope protein E1 and E1-NS1/E2 junction" /codon_start=1 BASE COUNT 93 a 115 c 117 g 89 t ORIGIN 1 acgacgcaag gttgcaattg ctctatctat cccggccata taacaggtca ccgcatggca 61 tgggatatga tgatgaactg gtcccctacg acggcgttag tggtagctca gctgctccgg 121 atcccacaag ccatcttgga catgatcgct ggtgctcact ggggagtcct ggcgggcata 181 gcgtatttct ccatggtggg gaactgggcg aaggtcttgg cagtgctgct gctatttgcc 241 ggcgtcgacg cggaaaccca cgtcactggg gggatcgccg ccaaaactac ggctagcctt 301 actggtctct tcaatttagg tgccaagcag aacatccagc tgatcaacac caacggcagt 361 tggcacatca acaggacggc cttgaactgc aatgatagcc tcaacaccgg ctgg //