Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!zaphod.mps.ohio-state.edu!wuarchive!uunet!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human T-cell receptor rearranged beta chain gene V-region (V-D-J) Message-ID: Date: 23 May 91 12:01:50 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 49 Approved: lear@genbank.bio.net Checksum: 13146 3 LOCUS HUMTCBYU 600 bp ds-DNA PRI 23-MAY-1991 DEFINITION Human T-cell receptor rearranged beta chain gene V-region (V-D-J) V-beta-ATL12-2. ACCESSION M11952 KEYWORDS T-cell receptor; T-cell receptor beta-chain; diversity region; joining region; processed gene; variable region; variable region. SOURCE Human peripheral blood lymphocyte cell line ATL-12 DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 600) AUTHORS Ikuta,K., Ogura,T., Shimizu,A. and Honjo,T. TITLE Low frequency of somatic mutation in beta-chain variable region genes of human T-cell receptors JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 7701-7705 (1985) STANDARD simple staff_review FEATURES Location/Qualifiers exon <21..69 /note="T-cell receptor beta-chain V-region (V-D-J), exon 1 /nomgen='TCRB' /map='7q32 or 7q35' /hgml_locus_uid='LP0151Q'" CDS join(21..69,207..560) /partial /note="T-cell receptor beta-chain V-region (V-D-J)" /codon_start=21 intron 70..206 /note="TCRB intron A" exon 207..>560 /note="T-cell receptor beta-chain V-region (V-D-J), exon 2" misc_recomb 503^504 /note="V-region end/D-region start" misc_recomb 515^516 /note="D-region end/J-region start" intron 561..>600 /note="intron J-C" BASE COUNT 124 a 143 c 169 g 164 t ORIGIN Chromosome 7. 1 catcctggcc tgaccctgcc atgggcacca ggctcctctg ctgggtggtc ctgggtttcc 61 tagggacagg tgagtcctca gaacaccaag tagtttcatt ttttctgttt gtaggtgtgt 121 gtgtgtgaga gagtggttgt gtgtgtgtgt gtgtatgatg actacaaata ttttccttat 181 tctgttgcca aattctattt ccacagatca cacaggtgct ggagtctccc agtcccctag 241 gtacaaagtc gcaaagagag gacaggatgt agctctcagg tgtgatccaa tttcgggtca 301 tgtatccctt ttttggtacc aacaggccct ggggcagggg ccagagtttc tgacttattt 361 ccagaatgaa gctcaactag acaaatcggg gctgcccagt gatcgcttct ttgcagaaag 421 gcctgaggga tccgtctcca ctctgaagat ccagcgcaca cagcaggagg actccgccgt 481 gtatctctgt gccagcagct tagggggggg gggcaatcag ccccagcatt ttggtgatgg 541 gactcgactc tccatcctag gtaagttgca gaatcagggt ggtatggcca ttgtcccttg //