Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!zaphod.mps.ohio-state.edu!sdd.hp.com!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73) Message-ID: Date: 26 May 91 12:02:24 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 156 Approved: lear@genbank.bio.net Checksum: 64601 9 LOCUS BLYGLUEND 4643 bp ds-DNA PLN 26-MAY-1991 DEFINITION Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73) ACCESSION X56260 KEYWORDS endohydrolase; glucanase; lichenase. SOURCE Hordeum vulgare DNA. ORGANISM Hordeum vulgare Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae. REFERENCE 1 (bases 1 to 4643) AUTHORS Fincher,G.B. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Slakeski,N., Baulcombe,D.C., Devos,K.M., Ahluwalia,B., Doan,D.N. and Fincher,G.B. TITLE Structure and tissue-specific regulation of genes encoding barley (1,3; 1,4)-beta-glucan endohydrolase JOURNAL Mol. Gen. Genet. 224, 437-449 (1990) STANDARD full staff_review COMMENT *source: strain=NK 1558; developmental stage=7 day old seedlings; *source: library=barley genomic;clone=lambda 14; **map: chromosome= long arm of chromosome 1; From EMBL entry HVGLUEND; dated 16-JAN-1991. FEATURES Location/Qualifiers mRNA join(474..619,3133..>4064) sig_peptide join(546..619,3133..3143) /note="putative" /product="(1,3;1,4)-beta- glucanase" sig_peptide join(3020..3077,3133..3143) /note="putative alternative" /product="(1,3;1,4)- beta-glucanase" mRNA join(2826..3077,3133..4064) /note="putative alternative" /evidence=EXPERIMENTAL CDS join(546..619,3133..4064) /EC_number="3.2.1.73" /note="syn. (1,3;1,4)-beta-glucanase" /product="lichenase" /codon_start=546 CDS join(2836..3077,3133..4064) /EC_number="3.2.1.73" /note="putative alternative" /product="lichenase" /codon_start=2836 exon 474..619 /number=1 exon 474..619 prim_transcript 474..>4643 intron 620..3132 /number=1 exon 2826..3077 /number=1 exon 2826..3077 /note="exon 1a" prim_transcript 2836..>4643 /note="putative alternative" intron 3078..3132 /number=1 /note="intron 1a" exon 3133..4064 /number=2 exon 3133..>4064 /number=2 exon 3133..>4064 exon 3133..4064 exon 3133..4064 exon 3133..4064 /note="putative alternative" mat_peptide 3144..4061 /EC_number="3.2.1.73" /note="syn. (1,3;1,4)-beta-glucanase" /product="lichenase" /evidence=EXPERIMENTAL polyA_signal 4399..4404 BASE COUNT 1166 a 1190 c 1110 g 1177 t ORIGIN 1 cgttgtgtca attcttctta cgtaagttat gtcggattcc accgaacacg gtccttgcgt 61 gaaaaaaccg ccgccgaatg tcgttgagta agacgtgaac atatccgacg cggcgcgacc 121 catcattgac ctagaaactt cactttcatg gtacatcatg ggtggagtcc aaaattcaaa 181 ctattttttc aaaagttgtt tggtaccact atgaatgaat gaattatccc cttcccctac 241 ctgcaacaac aacctggtgt accggataac ctctgcccac caccagacac acactgtgag 301 aaggcggtga cgcatgcaaa ccggcctagg tagtcaatcg caacaggcta aataaatgtc 361 gctggaggcg ttgggcctgc gctcccgagt ggattggacc gaactatgtc tcctcggatc 421 ctatataagg ggcctgcacc ccgttgtggc ctcaccagaa aagaaacaac aagagctttt 481 acagagagcc ttggcatcac ccacccacac cctcaccctc caacgcagct agagagagaa 541 agagaatggc aggccaaggc gttgcctcca tgttggctct ggcattgctc ctcggagcct 601 tcgcctccat cccacaaagt gattcccctt ccttccctcc ctctctctct cttgaagtga 661 ttgggtgcag tttttttttt tcatgcaggg agtttctttg aagatagtaa tacgtacgtt 721 gatcttagct ttcattaaga gaagcattag ggagctagct aggtagccgg cggccatggt 781 gtacccatgc tcacataaac ctctgtggga cgtcacatag cataccttcc tctgtttagg 841 tgcatgtcgc tttcgttctg cgttttattc ttcccgcgcc atcagtcgca tggtaaagca 901 tgaacggccg gcgcccgccg gtctcattat ttacctcgat gcgtccatca atgcatggga 961 gcacagtaac ttttcaaaaa aaaaattcga aaactaaaca cggtaaattt tgtaaaaaaa 1021 atcgttttca ctcgctaaaa gaatcaggag tcttgggttt tgctgcggag tatacgtatc 1081 aaaatatatg caccgcacgc tccaagataa aagtgcacgt cagcacgtgt gatcggcctt 1141 cattgtgttt cttctatgga agaaaacgtt gcaagaagta ggtattccgc aggaaaatta 1201 atatcttaag aacaacaaaa atgatatttt ctagataaaa cattgaaaga ggaagtaagc 1261 agtgaaaacg atgcttgtag atagtttcaa ctgttttaac cataaattaa tctagttgat 1321 cgtacgcaaa agcatcaagc aaaagcttgc aaatgaagtc tcgaaatgtt tggtgaccat 1381 gcatgtcagt tagctagctg catcttttta caaagtcaga aggtttaact aacgacctac 1441 aagtagctag ctaggccagt gtctctttct ccagtgtcat gcatgctaat cacctagaaa 1501 gtttttcttc ttcttcctcc tcttccctgc atgcaaagct gtgcatgcat gtctcgacag 1561 tgtcgcccta gcactgtaga cacgagccct accacttaat tggtggtttg ttccctgatt 1621 aattcggtgc aactactgct gaaccacccg tcgctaacca tctttttctt cttcctttgg 1681 tccgcatctt gacgtttttt cagcgatgga cgatgccgta ccggccagtc cagtggtcct 1741 actcgtttca gctagccact gttccattct tttaagctta acgaagacga ttacaccagc 1801 tgctagctag ccagtaacta taactcaact gcagcctttg tgtagtcatc atatcgactt 1861 tgaaagtgca accggtggat ccatggtaca tgacgccatc gatcaccagg cactaactaa 1921 ccatgcataa cccaggtgtt ggttctgctg gcctttccaa gtttggtctg cctgaaaaga 1981 attgtgatat aataggattg taggttagtg tagtggtact agctagtagt tggcacttga 2041 tcggccgggc agcaagttaa gaagaggatt aagttgcgtg tacttatatg gagtactttg 2101 tcatgcacgt gagctagacc gtttattgga gcttagctgg gagcagccgg agggcatgca 2161 tgcatgcacg ccatggcgat ccacatcgat cgtatgtgga ctatccaacg gccgtgctgc 2221 ggacgttgga ccagaaactt tggtttgtcc tagcatgtat gtatgcatga ggtctctaca 2281 cccccctgta tttctaggct tcctgccaat tgccatctac gtgtggtcga cctccattct 2341 gccctacgat attcctggcc cgtttagttt aataaatcca gctagctagt gccgtgcaag 2401 tactacacaa tttatgccat accattgctt ggcgatggca ctcttaagtg tacacgtact 2461 gtaaaaatac atgtattctt tctagcataa ttgatgtacc aactatcaag tgtaacactt 2521 taatagagta gattggtgta gagttagttg gtaaaccaag caaatcaggg agggtaaaag 2581 attcactgca ctggaagcta gacaaagttc attccttcct ttaaggttat ctagttcctt 2641 tttctccttg ctcgtggtag agtagctagt agctagtgac aagtcggtca aggcgccggc 2701 cgtgaaaata gcaatgttcc tcggccgtgt gcgtgcatct gacaccaact cgtgactgta 2761 aaaaaaacaa tatttaagtg gtgcatcagc caccaaagta tatagagaga aagagataaa 2821 aaaatgtgca aaactagtta gctagaggct tacacgcatg catccatgca tgcgtacaag 2881 aatttcagtt aaacgtcctt ttcggggagt tagtattatc cctcgccaac aggtcaaaag 2941 gctctgtgtg catgtgtgtt catgcatcgc cgccattctt gcttattggt ttctttttta 3001 tattccatca catgccatca tgggagaatt ttttaatttt ctactatggc aatggaacag 3061 tgctactact ctacctggtg caaataattg attttgtgaa ggttaactaa ccgaggttat 3121 attacattgc aggcgtggag tccatcgggg tgtgctacgg catgagcgcc aacaatctgc 3181 cggcggcgag caccgtggtc aacatgttca agtccaacgg gatcaactcc atgcggctgt 3241 acgctcccga ccaggcggcg ctgcaggcgg tcggcggcac gggcgtgaac gttgttgtgg 3301 gcgcgcccaa cgacgtgctc tccaacctcg ccgccagtcc cgcagcggct gcatcgtggg 3361 tgaggagcaa catccaggcg taccccaagg tctccttccg gtatgtctgc gtgggcaacg 3421 aggtcgccgg cggcgccacc cagaaccttg tccccgccat gaagaacgtg cagggcgcgc 3481 tggcctccgc cgggctgggc cacatcaagg tgaccacgtc ggtgtcgcag gccatcctgg 3541 gggtgtacag cccgccgtcc gccgggtcct tcaccggaga ggcggacgcg ttcatgggcc 3601 ccgtggtgca gttccttgcc cgcaccggcg cgccgctcat ggccaacatc tacccgtacc 3661 tggcctgggc ctacaacccg agcgccatgg acatgagcta cgcgctcttc accgcctccg 3721 gcaccgtggt ccaggacggc tcctacgggt accagaacct gttcgacacc accgtggacg 3781 ccttctacac ggccatggcc aagcacggcg gctccaacgt gaagctggtg gtgtccgaga 3841 gcgggtggcc gtcagccggc ggcacggcgg cgaccccggc caacgccagg atctacaacc 3901 agtacctcat caaccacgtc gggcgcggca ccccccgcca cccgggcgcc atcgagacct 3961 acgtcttctc catgttcaac gagaaccaga aggacaacgg cgtggagcag aactgggggc 4021 tcttctaccc caacatgcag cacgtctacc ccatcagctt ctgatgaggt agcagctacc 4081 tagtgcccgt atgtccgtac gtacgcgcgc gcgtataaga gcgtgtacgc cgtacgtatg 4141 cgcacattat gtattgtaca gggcttgggt tgggaacttg ggatgcgacc gctgaggcag 4201 ctcagatgcg tacgcgagta gtggcttgct atactagtgt accagtacgt atgattttcg 4261 atggaaggga agcatatgca aacgctcccc cttcctcgat tgatcatgca cttgatacgt 4321 acacgcatgt gtgcgtacct aggaactata ttgtagggtt caaaatttcg tcaaaacttg 4381 acgaaatttg tccaaaataa taaagtatga aatatatcgg cgaagaccga atattcctat 4441 atataatttt tccatgtgtc tataagccct gaccacacta acatataact ccaagatgtg 4501 caagtcggaa gaaacccaat taatcgcgtc ctacttaaga ttcaaatgag aaaaatcaca 4561 tggatgacat gggcatcgta catgagctcg taaatggaca ccagccggac acgtgtcctc 4621 agaaagggat gatgtagacg atc //