Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human DNA for 5' terminal region of LINE-1 transposable element Message-ID: Date: 27 May 91 12:22:13 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 64 Approved: lear@genbank.bio.net Checksum: 01398 4 LOCUS HUMCG13 1695 bp ds-DNA PRI 27-MAY-1991 DEFINITION Human DNA for 5' terminal region of LINE-1 transposable element clone CGL1-3 ACCESSION X52232 KEYWORDS LINE repetitive sequence; LINE-1; poly(A)-type retrotransposon; retrotransposon. SOURCE Homo sapiens DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1695) AUTHORS Hohjoh,H. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 1695) AUTHORS Hohjoh,H., Minakami,R. and Sakaki,Y. TITLE Selective cloning of the Human L1 (line-1) sequence which transposed in a relatively recent past. JOURNAL Nucleic Acids Res. 18, 4099-4104 (1990) STANDARD full automatic COMMENT *source: strain=Japanese; tissue=placenta; clone=CGL1-3; Data kindly reviewed (04-SEP-1990) by Hohjoh H. From EMBL entry HSCG13; dated 25-SEP-1990. FEATURES Location/Qualifiers misc_feature 1..231 /note="Alu sequence" misc_feature 232..1151 /note="LINE-1 (CGL1-3) 5'flanking region" misc_feature 1152..1695 /note="LINE-1 5'terminal region" BASE COUNT 629 a 302 c 374 g 387 t 3 others ORIGIN 1 tcgagaccag cctggccaac atggtgaaac cccatcgcta ctaaaaatac aaaaaatagc 61 tgggcgtggt ggcatgtgcc tgtaatccca gctacctggg gagctgaggc aggagaattg 121 ctagagccca caaagtggag gctgtagtga gttgagccac tgcactccag cctgggcgac 181 agagcaaaga ctctatctca aaaaaaaaaa acacaaaaaa caaaaaacaa aactgagaga 241 gccagaaatg gtaaatacat gtatgtattt aaattttttc tcaactctta aagtttttaa 301 aagacaacta tttaaaaaga aaaaataatg tattataggg ttcacagcac atgaacaagt 361 aaaacacata acaacagcac aaaagatagg nctgaaatgg agatagagtg ttaaagagta 421 tttatatatg aagtaatata tattatttga aggttgacag tgataagcta aagatgtgta 481 ttatgaaccc taaaattacc tctgagaaat aaagcagagg gatggctaat aaaccaaaag 541 gaaagataaa ataaaataat agaaagtatt tgttggttca aaaacaggca gaaaagnagg 601 gagaaaatca tgaagaacag agccaaaaat tagaaagtga atatcaaatt ggcacagtaa 661 tactccacat aataattaca ttaaatataa atagaccaaa aaatccagtc aaaaaaagat 721 tttaagattt gattaaaaag gaaacaccag ccatgcaggg tgactcatat ctgccattgc 781 agtactttgg gagactgagg cagaaggatc acatgaggcc aggattttga gaccagcctg 841 agaaagaaag caagacccat gactctacaa aaaaaaggaa atagctaact atatgctgtt 901 tacaaaagac acatattaaa tataaaagac atatgttaaa tataaatata taaaatatat 961 aaattatata atatataaat atataaaata tataagttaa agttaaaaga tagaaaaaga 1021 caaacaagga aatattaatc ataagaaaac tggagaggtt ctgttaatat aaaacaaagt 1081 acatacagaa catttcagta tcaccagaga taaggaggga aatttcacaa tgattaataa 1141 gtaccaattt ggggaggagc caagatggcc gaataggaac agctcccgtc tgcagctccc 1201 agcctgagcg acgcagaaga cgggtgattt ctgcatttcc atctgaggta ccgggttcat 1261 ctcactaggg agtgccagac agtgggcgca ggtcagtggg tgcgcgcncc gtgcgcgagc 1321 cgaagcaggg cgaggcattg cctcacacgg gaagcacaag gggtcaggga gttccctttc 1381 cttttttttt tttttttttt tttttttttt tttttttttt ggagttccct ttcctaatca 1441 aagaaagggg tgacggacgg cacctggaaa atcgggtcac tcccacccga atactgcgct 1501 tttccgacgg gcttaaaaaa cggcacagca cgagattata acccgcacct ggctcggagg 1561 gtcctacccc acggagtctc gctgattgct agcacagcag tctgagatca aactgcaagg 1621 cggcagcgag gctgggggag gggcgcccgc cattgctgag gcttgcttag gtaaacaaag 1681 cagcgggaag ctcga //