Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human DNA for 5' terminal region of LINE-1 transposable element Message-ID: Date: 27 May 91 12:22:10 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 62 Approved: lear@genbank.bio.net Checksum: 37264 4 LOCUS HUMCG11 1716 bp ds-DNA PRI 27-MAY-1991 DEFINITION Human DNA for 5' terminal region of LINE-1 transposable element clone CGL1-1 ACCESSION X52230 KEYWORDS LINE repetitive sequence; LINE-1; poly(A)-type retrotransposon; retrotransposon. SOURCE Homo sapiens DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1716) AUTHORS Hohjoh,H. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 1716) AUTHORS Hohjoh,H., Minakami,R. and Sakaki,Y. TITLE Selective cloning of the Human L1 (line-1) sequence which transposed in a relatively recent past. JOURNAL Nucleic Acids Res. 18, 4099-4104 (1990) STANDARD full automatic COMMENT *source: strain=Japanese; tissue=placenta; clone=CGL1-1; Data kindly reviewed (04-SEP-1990) by Hohjoh H. From EMBL entry HSCG11; dated 25-SEP-1990. FEATURES Location/Qualifiers misc_feature 1..1276 /note="LINE-1 (CGL1-1) 5'flanking region" misc_feature 1277..1716 /note="LINE-1 5'terminal region" BASE COUNT 700 a 261 c 316 g 439 t ORIGIN 1 gatctagagt tcagtacagg atagatttct tcaagcccta cctctattaa aaagaatttt 61 taaagctccc aagactcaaa gataaatttt taaaatatta attccagaat attaaaacaa 121 ttttctaaaa tagtgaagaa tcaaattaat atcaaattct aaatagctac actacgtatg 181 aggagaaaat gacataaaat ttttgttttg aaggaaaaga ccttgagtca acttgaatat 241 ctagttgaat tataatttat atatgagagt aaacattacc caacttttga actagtaaaa 301 aaaaaaaatc ttaataaagg gaatcaaaat aaagaaggag aagggagagg aaaattaaga 361 gaaaagaaag agaaaaaata cgtcaattga tatataaaaa taacatagta ggaataagta 421 ctgatgctat ttataattaa aatagattac tccgaaggat acatatttcc ataatagttt 481 tataaaaaat tcagcaatgt cgaagataag agacttgaac tgagaagaaa ctaaatgatt 541 gaaaataaac agatatgcca aacaaatact gaaaaacaga atgctagagc ttcaactttc 601 atatgaggca aaacagaact taaaaacaaa caagaacact atgagatata agtaataatt 661 cacagagtag gaatatgtaa taaatcatga acacatatgc acctaataac atattttcag 721 gatatacaaa gcaacaattt acatgatgat gcagcagata aaattaaaac tttagctgga 781 aatgttaatg tttttatcac agacactgaa aaaatgaagt agacaaaaat gtaaacatta 841 tagacaattt gaaacataaa caaagcttta cactgattaa ataaaggtta ttttttttta 901 aatgtgcttg gaaagtttat aaattcagcc aaataataaa gtctcagcaa aagcagaaaa 961 cgtttattat gtaaactatg ttatctaatt gttatactat aatatcataa ataaattaca 1021 aaaggataat tttgaaattc catatgtcca ataattaaaa taatactact aaatcacagg 1081 taaaaattaa gtcagaaagg aaattagtaa aatttagatc tgaaagacaa taaaaagcca 1141 aatgacaaaa tttgtgagtt acagctatag caatatttaa aataaaaatt ataaatacat 1201 ttattttaaa aataaggaag attaaaaact aatgaactaa gaatttgatt ttaaaaatat 1261 ataagaggat taccaggaga ggagccaaga tggccgaata gcaacagctc cggtctacag 1321 ctcccagcgt gagcgacgca gaagacgggt gatttctgca tttccatctg aggtactggg 1381 ttcatctcac tagggagtgc cagacagtgg gcgcaggtca gtggcgcgca ccgtgcacga 1441 gccgaagcag ggcgaggcat tgtctcactt gggaagcgca aggggtcagg gagttccctt 1501 tccgagtcaa agcaaggggt gacggacgca cctggaaaat cgggtctctc ccacccgaat 1561 attgcgcatt tcggaccggc ttaaaaaacg gcgcaccgcg agattatatc ttgcacctgg 1621 ctaggagggt cctacgccca cggagtctcg ctgattgcta gcacagcagt ctgagatcaa 1681 actgcaaggc cgcagcaagg ctgggggagg ggcgcc //