Path: utzoo!utgpu!watserv1!watmath!att!emory!swrinde!zaphod.mps.ohio-state.edu!think.com!linus!agate!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: N.gonorrhoeae por gene for outer membrane protein PIB Message-ID: Date: 27 May 91 12:34:45 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 62 Approved: lear@genbank.bio.net Checksum: 16032 4 LOCUS NGOPIB 1357 bp ds-DNA BCT 27-MAY-1991 DEFINITION N.gonorrhoeae por gene for outer membrane protein PIB ACCESSION X52823 KEYWORDS PIB protein; outer membrane protein; porin. SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1357) AUTHORS Heckels,J.E. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 1357) AUTHORS Butt,N.J., Lambden,P.R. and Heckels,J.E. TITLE The nucleotide sequence of the por gene from Neisseria gonorrhoeae P9 encoding expression of the outer membrane protein PIB JOURNAL Nucleic Acids Res. 18, 4258-4258 (1990) STANDARD full automatic COMMENT *source: strain=P9, serovar IB-26; From EMBL entry NGPIB; dated 26-JUL-1990. FEATURES Location/Qualifiers RBS 8..11 /note="ribosome binding site" CDS 20..1063 /note="precursor protein (AA -19 to 329)" /codon_start=20 CDS 20..76 /note="signal peptide (AA -19 to -1)" /codon_start=20 CDS 77..1063 /note="mature PIB protein (AA 1-329)" /codon_start=77 misc_feature 1113..1238 /note="heptameric TTTTCTG repeats" misc_feature 1239..1357 /note="heptameric TTTTCTG repeats" BASE COUNT 308 a 361 c 303 g 385 t ORIGIN 1 ccaaaaaagg aatacagcaa tgaaaaaatc cctgattgcc ctgactttgg cagcccttcc 61 tgttgcggca acggccgatg tcaccctgta cggtgccatc aaagccggcg tacaaactta 121 ccgttctgta gaacatacag acggcaaggt aagtaaagtg gaaaccggca gcgaaatcgc 181 cgacttcggt tcaaaaatcg gcttcaaagg ccaagaagac ctcggcaacg gtctgaaggc 241 cgtttggcag ttggaacaag gtgcctccgt cgccggcact aacaccggct ggggcaacaa 301 acaatccttc gtcggcttga agggcggctt cggtaccatc cgcgccggta gcctgaacag 361 ccccctgaaa aacaccgacg ccaacgtcaa tgcttgggaa tccggcaaat ttaccggcaa 421 tgtgctggaa atcagcggaa tggccaaacg ggaacaccgc tacctgtccg tacgctacga 481 ttctcccgaa tttgccggct tcagcggcag cgtacaatac gcacctaaag acaattcagg 541 ctcaaacggc gaatcttacc acgttggctt gaactaccaa aacagcggct tcttcgcaca 601 atacgccggc ttgttccaaa gatacggcga aggcactaaa aaaatcgaat acgaacatca 661 agtttatagt atccccagcc tgtttgttga aaaactgcaa gttcaccgtt tggtaggcgg 721 ttacgacaat aatgccctgt acgtttccgt agccgcgcaa caacaagatg ccaaattgta 781 tggagcaagg agggctaatt cgcacaactc tcaaaccgaa gttgccgcta ccgcggcata 841 ccgtttcggc aatgtaacgc cccgcgtttc ttacgcccac ggcttcaaag gcactgttga 901 tagtgcagac cacgacaata cttatgacca agtggttgtc ggtgcggaat acgacttctc 961 caaacgcact tctgccttgg tttctgccgg ctggttgcaa gaaggcaaag gcgcagacaa 1021 aatcgtatcg actgccagcg ccgtcgttct gcgccacaaa ttctaatctg caaagattgg 1081 tatcaacaaa aagcctgtcg tcagacaggc ttttttctgt tttctgtttt ctgttttctg 1141 ttttctgttt tctgttttct gttttctgtt ttctgttttc tgttttctgt tttctgtttt 1201 ctgttttctg ttttctgttt tctgttttct gttttctgtt ttccgttttc cgttttccgt 1261 tttccgtttt ccgttttccg ttttccgttt tccgttttcc gttttccgtt ttccgttttc 1321 cgttttccgt tttccgtttt ccgttttccg ttttccg //