Path: utzoo!utgpu!watserv1!watmath!att!emory!swrinde!zaphod.mps.ohio-state.edu!think.com!linus!agate!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Neisseria gonorrhoeae gene for protein II (pFLOB1100) Message-ID: Date: 27 May 91 12:34:49 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 66 Approved: lear@genbank.bio.net Checksum: 36117 4 LOCUS NGOPIIG1 1448 bp ds-DNA BCT 27-MAY-1991 DEFINITION Neisseria gonorrhoeae gene for protein II (pFLOB1100) ACCESSION X06435 Y00550 KEYWORDS . SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1448) AUTHORS Connell,T.D. JOURNAL Unpublished (1987) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Connell,T.D., Black,W.J., Kawula,T.H., Barritt,D.S., Dempsey,J.A., Kverneland,K., Stephenson,A., Schepart,B.S., Murphey,G.L. and Cannon,J.G. TITLE Recombination among Protein II genes of Neisseria gonorrhoeae generates new coding sequences and increaes structural viability in the Protein II family JOURNAL Mol. Microbiol. 2, 227-236 (1988) STANDARD full staff_review COMMENT *source: strain=FA1090; clone=pFLOB1100; see also x06436-37 for further PII genes each gene probably represents a non-expressed copy of a PII gene. the atg start codon is aout-of-frame with the mat. protein; a frame shift would be consistent with the low level of PII production in E. coli clones (referring to authors). From EMBL entry NGPIIG1; dated 06-JUL-1989. FEATURES Location/Qualifiers promoter 94..99 /note="put. -35 region" promoter 117..122 /note="put. -10 region cds" CDS 187..>186 /note="put. signal peptide; see CC" /codon_start=187 CDS 311..1033 /note="put. mat. PII protein (AA 1-242)" /codon_start=311 BASE COUNT 354 a 447 c 332 g 315 t ORIGIN 1 gatccgcccg gtgcttcatc accttaggga accgttccct ttgagccggg gcggggcaac 61 ccgtaccggt ttttgttcat ccgccatatt gtgttgaaac accgcccgga acccgatata 121 atccgccctt caacatcagt gaaaatcttt ttttttaacc ggtcaaaccg atataaggag 181 ccgaaaatga atccagcccg caaaaaacct tctcttctct tctcttctct tctcttctct 241 tctcttctct tctcttctct tctcttctct tctcttctct tctcttctct tctcttcggc 301 agcgcaggcg gcaagtgaag gcaatggccg cggcccgtat gtgcaggcgg atttagccta 361 cgccgccgaa cgcattaccc acgattatcc ggaaccaacc gctccaggca aaaacaaaat 421 aagcacggta agcgattatt tcagaaacat ccgtacgcat tccatccacc ccagggtgtc 481 ggtcggctac gacttcggcg gctggaggat agcggcagat tatgcccgtt acagaaagtg 541 gaacaacagt aaatattccg tcaacacaaa aaaggtgaac gaaaacaagg gcgaaaagat 601 aaacgtgacg caatatctga aggcggaaaa tcaggaaaac ggtacgttcc acgccgtttc 661 ttctctcggc ttgtccgccg tttacgattt caaactcaac gacaaattca aaccctatat 721 cggtgcgcgc gtcgcctacg gacacgtcag acacagcatc gattcgacta aaaaaataac 781 aggtactctt accgcctacc ctagtgatgc tgacgcagca gttacggttt atcctgacgg 841 acatccgcaa aaaaacacct atcaaaaaag caacagcagc cgccgcttgg gcttcggcgc 901 gatggcgggc gtgggcatag acgtcgcgcc cggcctgacc ttggacgccg gctaccgcta 961 ccacaactgg ggacgcttgg aaaacacccg cttcaaaacc cacgaagcct cattgggcat 1021 gcgctaccgc ttctgattcc ccgataccga tgccgtctga accttcagac ggcatttttg 1081 atgcacctgc cgtttacagg cgcggggcgg gcgcggggaa atacccgaac cgtcattccc 1141 gacaataccg caatctcgaa acccgtcatt cccgcgcagg cgaaatccgg acctgtccgc 1201 acggaaactt atcggataaa acggttgccc aaaccccgcg tcctagattc ccacttccgt 1261 gggaatgacg gttcggttgc tacggcccgc tgattccccg acaccgatgc cgtctgaacc 1321 ttcagacggt catttttgat gcgctcgccg tttacaggcg cggggcgggc gcagtaaaat 1381 acccgaaccg tcatccccga caacaccgta atctcgaaac ccgtcattcc cgcgcaggcg 1441 ggaatcta //