Path: utzoo!utgpu!watserv1!watmath!att!emory!swrinde!zaphod.mps.ohio-state.edu!think.com!linus!agate!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Neisseria gonorrhoeae gene for protein II (pFLOB210) Message-ID: Date: 27 May 91 12:34:52 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 73 Approved: lear@genbank.bio.net Checksum: 48056 5 LOCUS NGOPIIG3 1912 bp ds-DNA BCT 27-MAY-1991 DEFINITION Neisseria gonorrhoeae gene for protein II (pFLOB210) ACCESSION X06437 Y00550 KEYWORDS . SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1912) AUTHORS Connell,T.D. JOURNAL Unpublished (1987) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Connell,T.D., Black,W.J., Kawula,T.H., Barritt,D.S., Dempsey,J.A., Kverneland,K., Stephenson,A., Schepart,B.S., Murphey,G.L. and Cannon,J.G. TITLE Recombination among Protein II genes of Neisseria gonorrhoeae generates new coding sequences and increaes structural viability in the Protein II family JOURNAL Mol. Microbiol. 2, 227-236 (1988) STANDARD full staff_review COMMENT *source: strain=FA1090; clone=pFLOB210; see also x06435-36 for further PII genes each gene probably represents a non-expressed copy of a PII gene. the atg start codon is aout-of-frame with the mat. protein; a frame shift would be consistent with the low level of PII production in E. coli clones (referring to authors). From EMBL entry NGPIIG3; dated 06-JUL-1989. FEATURES Location/Qualifiers promoter 185..190 /note="put. -35 region" promoter 208..213 /note="put. -10 region cds" CDS 275..>274 /note="put. signal peptide; see CC" /codon_start=275 CDS 383..1117 /note="mat. PII protein (AA 1-245)" /codon_start=383 BASE COUNT 470 a 570 c 440 g 424 t 8 others ORIGIN 1 gatcaacccg ggcggcttgt cttttaaggg tttgcaaggc gggcggggtc gtccgttccg 61 gtggaaataa tatatcgatt gcgcttcaag gccctgcatg tgcctcattg ccacccgttt 121 aaacacggtt tttatctgac aggcgcgcaa tccgccccct catttgttaa tccgccatat 181 tgtattgaaa caccgcccgg aacccgatat aatccgccct tcaacatcag tgaaaatctt 241 tttttaaccg gttaaaccga ataaggagcc gaaaatgaat ccagcccgca aaaaaccttc 301 tcttctcttc tcttctcttc tcttctcttc tcttctcttc tcttctcttc tcttctcttc 361 tcttctcttc ggcagcgcag gcgcaagtga aggcaatggc cgcggcccgt atgtgcaggc 421 ggatttagcc tacgccgccg aacgcattac ccacgattat ccggaaccaa ccgctccagg 481 caaaaacaaa ataagcacgg taagcgatta tttcagaaac atccgtacgc attccatcca 541 ccccagggtg tcggtcggct acgacttcgg cggctggcgc atcgccgcgg attatgcccg 601 ttacaggaaa tggcacaaca ataaatattc cgtgaacata aaagagttgg aaagaaagaa 661 taataaaact tttggcggca accagcttaa cataaaatac caaaagacgg aacatcagga 721 aaacggcaca ttccacgccg tttcttctct cggcttgtcc gccgtttacg atttcaaact 781 caacgacaaa ttcaaaccct atatcggtgc gcgcgtcgcc tacggacacg tcagacacag 841 catcgattcg actaaaaaaa taacaggtac tcttaccgcc taccctagtg atgctgacgc 901 agcagttacg gtttatcctg acggacatcc gcaaaaaaac acctatcaaa aaagcaacag 961 cagccgccgc ttgggcttcg gcgcgatggc gggcgtgggc atagacgtcg cgcccggcct 1021 gaccttggac gccggctacc gctaccacaa ctggggacgc ttggaaaaca cccgcttcaa 1081 aacccacgaa gcctcgttgg gcatgcgcta ccgcttctga ttccccgata ccgatgccgt 1141 ctgaaccttc agacggcatt tttaatcgcc cgccgtttac aggcgcgggg cgggcgcagt 1201 aaaatacccg aaccgtcatt cccgacaaca ccgcaatctc gaaattcgtc attcccgcgc 1261 aggcgggaat ccggacctgt ccgcacggaa acttatcgga taaaacggtt gcccaaaccc 1321 cgccgtcctt annnnnncnn ttccgtggga atgacggttc agttgcatag ggccgggtgg 1381 tcgaaagagg cggattcgat ggattcgatg aaaacggtag aaatgttgga ttgatgggaa 1441 tggcggactg aagcccaccg attcatcgac tccaacgttt acgatgcttc caacggtttc 1501 agacggcatt ttttacacaa ttcccgccat tttccatcat tcccgacaac accgcaatct 1561 cgaaacccgt catttccgac aacaccgcaa tcttgaaatt cgtcattccc gataacaccg 1621 caatctcgaa acccgtcatt cccgcgcagg cgggaatcca gacccccgac gcggcgggaa 1681 tctatcggaa atgactgaaa ccccgcgtcc tagattccca cttccgtggg aatgacggtt 1741 cggttgctac ggcccgctga ttccccgaca ccgatgccgt ctgaaccttc agacggcatc 1801 caaaacccgg tgtttcaagg cgggcaggcg gttgcggacg ctgttcaggc ggttggcatc 1861 gatgtctgcc gtaacgatgc cttcgccttc gggtaatacg tccaacacgt cg //