Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Mouse germline immunoglobulin V(H)II pseudogene H26-1 Message-ID: Date: 27 May 91 12:43:16 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 60 Approved: lear@genbank.bio.net Checksum: 39600 3 LOCUS MUSIGVH9 653 bp ds-DNA ROD 27-MAY-1991 DEFINITION Mouse germline immunoglobulin V(H)II pseudogene H26-1 ACCESSION X02462 KEYWORDS enhancer; germline; immunoglobulin; immunoglobulin heavy chain; pseudogene; signal peptide; variable region; variable region subgroup VH-II. SOURCE Mus musculus DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 653) AUTHORS Schiff,C., Milili,M. and Fougereau,M. TITLE Functional and pseudogenes are similarly organized and may equally contribute to the extensive antibody diversity of the IgVHII family JOURNAL EMBO J. 4, 1225-1230 (1985) STANDARD full automatic COMMENT From EMBL entry MMIGVH9; dated 16-JAN-1991. FEATURES Location/Qualifiers sig_peptide join(124..169,253..263) CDS join(124..169,253..557) /note="(aa 1- 94, kabat numbering)" /product="pot. H26-1 variable region" /codon_start=124 misc_feature 16..25 /note="sequence homologous to SV40 enhancer" promoter 43..49 /note="pot. TATA-box" precursor_RNA 72..>71 /note="put. H26-1 primary transcript" mRNA 72..169 /note="pot. H26-1 mRNA; exon 1" misc_RNA 72..72 /note="put. CAP-site" misc_feature 124..126 /note="mutated start codon of pseudogene" intron 170..252 /note="pot. intron I" mRNA 253..>252 /note="pot. H26-1 mRNA; exon 2" mat_peptide 264..557 /note="(aa 1- 94, kabat numbering)" /product="pot. H26-1 variable region" misc_feature 558..564 /note="recombination signal" misc_feature 588..596 /note="recombination signal" BASE COUNT 185 a 156 c 150 g 162 t ORIGIN 1 ggcctgctca tgaatatgca tattacctgt gtctatgttg gttaaaaaca gggatatcaa 61 caccctgaaa accacatatg tccaatgtcc tctccatagt cccttaacac actgactcta 121 accataaaat ggagctggat ctttctcttc ctcctgtcag gaactgcacg taaggggctc 181 accagttcca aatctgaaga aagaaaatat cctaagatgt caatgacaac cactctgtct 241 ttcttttcac aggtgtccac tctgaggtcc agctgcagca gtctggacct gagctggtga 301 agctggggcc ttcagtgaag atatcctgca aggcttctgg ttactcattc actggctact 361 acatgcactg ggtgaagcag agccatggaa agagccttga gtggattgga gaaattaatc 421 cttacaatgg tggtactagc tacaaccaga agttcaaggg caaggccaca ttgactgtag 481 acacatcctc cagcacagcg tacatggagc tccacagcct gacatctgag gactctttgg 541 tctattactg tgcaagacac agtgttgtaa ccacagcctg agtgtgtcag aaaactggaa 601 ggtgcagcaa ggtgccttga gactgacaag acttagagaa cagtagcttg tag //