Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA1) Message-ID: Date: 27 May 91 12:43:36 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 54 Approved: lear@genbank.bio.net Checksum: 15768 3 LOCUS MUSTCRA01 387 bp ss-mRNA ROD 27-MAY-1991 DEFINITION Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA1) ACCESSION X02934 KEYWORDS T-cell receptor; T-cell receptor alpha; constant region; joining region; signal peptide; variable region. SOURCE Mus musculus RNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 387) AUTHORS Arden,B., Klotz,J.L., Siu,G. and Hood,L. TITLE Diversity and structure of genes of the alpha family of mouse T-cell antigen receptor JOURNAL Nature 316, 783-787 (1985) STANDARD full automatic COMMENT *source: strain=C57Bl/Ka; clone=TA1; The 3' end of V(alpha) segment was determined referring to germline V(alpha) 5H gene segment (see X02833). The 5' end of the J(alpha) segment was determined by assuming that it begins one codon after the end of the V(alpha) segment. From EMBL entry MMTCRA01; dated 02-APR-1988. FEATURES Location/Qualifiers CDS 1..>387 /note="precursor" /codon_start=1 CDS 1..54 /note="put. signal peptide (aa -18 to -1)" /codon_start=1 CDS 55..>387 /note="put. mature alpha chain (aa 1-111)" /codon_start=55 CDS 55..324 /note="put. V(alpha) 6 segment" /codon_start=55 CDS 325..327 /note="put. junctional diversity region" /codon_start=325 CDS 328..385 /note="put. J(alpha) segment (385 is 1st base in codon)" /codon_start=328 CDS 386..>387 /note="C(alpha) segment (386 is 2nd base in codon)" /codon_start=386 BASE COUNT 103 a 89 c 103 g 92 t ORIGIN 1 atgggatgtg tgagtggaat tgccattctc ctggctttgg gtattgcggg tgatgctaag 61 actacacaac cagattcaat ggaaagtact gaaggagaaa cggtgcactt gccttgtagc 121 cacgccacaa tcagtggaaa cgagtacatc tattggtacc gacaggttcc tcttcagggt 181 ccagaatatg tgactcacgg tctacaacaa aatacaacca atagtatggc tttcctggct 241 attgcctctg acagaaagtc aagcacctcg atcctgcctc atgtcagcct gagagacgcg 301 gctgtgtacc actgtatcct gagagtagga ggcactgggt ctaagctgtc atttgggaag 361 ggggcaaagc tcacagtgag tccagac //