Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA28) Message-ID: Date: 27 May 91 12:43:45 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 47 Approved: lear@genbank.bio.net Checksum: 56770 3 LOCUS MUSTCRA28 318 bp ss-mRNA ROD 27-MAY-1991 DEFINITION Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA28) ACCESSION X02931 KEYWORDS T-cell receptor; T-cell receptor alpha; constant region; joining region; variable region. SOURCE Mus musculus RNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 318) AUTHORS Arden,B., Klotz,J.L., Siu,G. and Hood,L. TITLE Diversity and structure of genes of the alpha family of mouse T-cell antigen receptor JOURNAL Nature 316, 783-787 (1985) STANDARD full automatic COMMENT *source: strain=C57Bl/Ka; clone=TA28; The 3' end of V(alpha) segment was determined referring to germline V(alpha) 5H gene segment (see X02833). The 5' end of the J(alpha) segment was determined by assuming that it begins one codon after the end of the V(alpha) segment. From EMBL entry MMTCRA28; dated 02-APR-1988. FEATURES Location/Qualifiers CDS <1..>318 /note="alpha chain fragment (put. aa 9-114)" /codon_start=1 CDS <1..252 /note="put. V(alpha) 4 segment" /codon_start=1 CDS 253..255 /note="put. junctional diversity region" /codon_start=253 CDS 256..310 /note="put. J(alpha) segment (310 is 1st base in codon)" /codon_start=256 CDS 311..>318 /note="C(alpha) segment (311 is 2nd base in codon)" /codon_start=311 BASE COUNT 89 a 84 c 73 g 72 t ORIGIN 1 ccagtgacac tgtctgaagg gacttctctg actgtgaact gttcctatga aaccaaacag 61 tacccaaccc tgttctggta tgtgcagtat cccggagaag gtccacagct cctctttaaa 121 gtcccaaagg ccaacgagaa gggaagcaac agaggttttg aagctacata caataaagaa 181 gccacctcct tccacttgca gaaagcctca gtgcaagagt cagactcggc tgtgtactac 241 tgtgctctgg ggaaatctgg cagctggcaa ctcatctttg gatctggaac ccaactgaca 301 gttatgcctg acatccag //