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From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA39)
Message-ID: <May.27.05.43.48.1991.26980@genbank.bio.net>
Date: 27 May 91 12:43:48 GMT
Sender: root@genbank.bio.net
Distribution: bionet
Lines: 54
Approved: lear@genbank.bio.net
Checksum: 17093     3

LOCUS       MUSTCRA39     396 bp ss-mRNA            ROD       27-MAY-1991
DEFINITION  Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA39)
ACCESSION   X02929
KEYWORDS    T-cell receptor; T-cell receptor alpha; constant region;
            joining region; signal peptide; variable region.
SOURCE      Mus musculus RNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Arden,B., Klotz,J.L., Siu,G. and Hood,L.
  TITLE     Diversity and structure of genes of the alpha family of mouse
            T-cell antigen receptor
  JOURNAL   Nature 316, 783-787 (1985)
  STANDARD  full automatic
COMMENT     *source: strain=C57Bl/Ka; clone=TA39; tissue=thymus; The 3' end of
            V(alpha) segment was determined referring to germline V(alpha) 5H
            gene segment (see X02833). The 5' end of the J(alpha) segment was
            determined by assuming that it begins one codon after the end of
            the V(alpha) segment.
            
            From EMBL    entry MMTCRA39;  dated 02-APR-1988.
FEATURES             Location/Qualifiers
     CDS             1..>396
                     /note="put. precursor"
                     /codon_start=1
     CDS             1..60
                     /note="put. signal peptide (aa -20 to -1)"
                     /codon_start=1
     CDS             61..>396
                     /note="put. mature alpha chain (aa 1-112)"
                     /codon_start=61
     CDS             61..336
                     /note="put. V(alpha) 2 segment"
                     /codon_start=61
     CDS             337..339
                     /note="junctional diversity region"
                     /codon_start=337
     CDS             340..388
                     /note="J(alpha) segment (388 is 1st base in codon)"
                     /codon_start=340
     CDS             389..>396
                     /note="C(alpha) segment (389 is 2nd base in codon)"
                     /codon_start=389
BASE COUNT      115 a    103 c     93 g     85 t
ORIGIN
        1 ttcctcctag gccttcacct agctggggtg agtggccagc agcaggagaa acgtgaccag
       61 cagcaggtga gacaaagtcc ccaatctctg acagtctggg aaggagagac agcaattctg
      121 aactgcagtt atgaggacag cacttttgac tacttcccat ggtactggca gttccctagg
      181 gaaagccctg cactcctgat agccatacgt ccagtgtcca ataaaaagga agatggacga
      241 ttcacaatct tcttcaataa aagggagaaa aagctctcct tgcacatcac agactctcag
      301 cctggagact cagctaccta cttctgtgca gcaaattctg ggacttacca gaggtttgga
      361 actgggacaa aactccaagt cgttccaaac atccag
//